Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653230 | XP_013457028.1 | 75.851 | 323 | 42 | 4 | 1 | 288 | 55 | 376 | 1.52e-168 | 494 |
| Msa0653230 | XP_013457028.1 | 90.759 | 303 | 26 | 1 | 295 | 595 | 74 | 376 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612590 | Msa0653230 | 0.845283 | 4.472391e-59 | -8.615850e-47 |
| Msa0653230 | Msa0695650 | 0.876239 | 1.635080e-68 | -8.615850e-47 |
| Msa0653230 | Msa0798790 | 0.824850 | 6.456365e-54 | -8.615850e-47 |
| Msa0653230 | Msa0837320 | 0.808554 | 2.926045e-50 | -8.615850e-47 |
| Msa0557910 | Msa0653230 | 0.912945 | 1.087498e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653230 | MtrunA17_Chr4g0047221 | 90.759 | 303 | 26 | 1 | 295 | 595 | 74 | 376 | 0.0 | 577 |
| Msa0653230 | MtrunA17_Chr4g0047221 | 75.851 | 323 | 42 | 4 | 1 | 288 | 55 | 376 | 1.40e-172 | 494 |
| Msa0653230 | MtrunA17_Chr4g0047231 | 84.259 | 324 | 15 | 2 | 1 | 288 | 1 | 324 | 0.0 | 558 |
| Msa0653230 | MtrunA17_Chr4g0047231 | 85.902 | 305 | 39 | 3 | 295 | 595 | 20 | 324 | 0.0 | 531 |
| Msa0653230 | MtrunA17_Chr2g0282301 | 58.446 | 296 | 115 | 6 | 303 | 595 | 27 | 317 | 3.94e-114 | 343 |
| Msa0653230 | MtrunA17_Chr2g0282301 | 53.125 | 320 | 115 | 7 | 1 | 288 | 1 | 317 | 6.66e-109 | 329 |
| Msa0653230 | MtrunA17_Chr2g0282311 | 50.859 | 291 | 133 | 5 | 302 | 589 | 29 | 312 | 2.36e-96 | 297 |
| Msa0653230 | MtrunA17_Chr2g0282311 | 46.795 | 312 | 135 | 4 | 6 | 288 | 10 | 319 | 3.11e-91 | 284 |
| Msa0653230 | MtrunA17_Chr4g0040171 | 53.975 | 239 | 98 | 6 | 360 | 595 | 61 | 290 | 4.74e-79 | 251 |
| Msa0653230 | MtrunA17_Chr4g0040171 | 51.230 | 244 | 102 | 7 | 53 | 288 | 56 | 290 | 2.83e-74 | 239 |
| Msa0653230 | MtrunA17_Chr5g0396281 | 32.479 | 234 | 141 | 5 | 341 | 562 | 12 | 240 | 4.40e-40 | 146 |
| Msa0653230 | MtrunA17_Chr5g0396281 | 34.500 | 200 | 120 | 4 | 63 | 254 | 44 | 240 | 7.94e-38 | 140 |
| Msa0653230 | MtrunA17_Chr7g0251511 | 27.755 | 245 | 155 | 7 | 30 | 262 | 46 | 280 | 1.34e-30 | 122 |
| Msa0653230 | MtrunA17_Chr7g0251511 | 32.203 | 177 | 113 | 3 | 395 | 570 | 110 | 280 | 3.52e-29 | 118 |
| Msa0653230 | MtrunA17_Chr4g0075591 | 35.088 | 171 | 91 | 2 | 382 | 552 | 93 | 243 | 9.52e-30 | 119 |
| Msa0653230 | MtrunA17_Chr4g0075591 | 29.389 | 262 | 145 | 7 | 1 | 244 | 4 | 243 | 9.62e-30 | 119 |
| Msa0653230 | MtrunA17_Chr4g0075611 | 35.294 | 170 | 90 | 3 | 383 | 552 | 112 | 261 | 5.29e-29 | 117 |
| Msa0653230 | MtrunA17_Chr4g0075611 | 34.177 | 158 | 90 | 3 | 93 | 244 | 112 | 261 | 2.06e-27 | 112 |
| Msa0653230 | MtrunA17_Chr1g0166241 | 36.220 | 127 | 75 | 2 | 421 | 547 | 153 | 273 | 3.87e-28 | 115 |
| Msa0653230 | MtrunA17_Chr1g0166241 | 34.646 | 127 | 71 | 3 | 119 | 239 | 153 | 273 | 1.12e-24 | 105 |
| Msa0653230 | MtrunA17_Chr8g0339051 | 35.075 | 134 | 86 | 1 | 420 | 552 | 130 | 263 | 1.03e-26 | 110 |
| Msa0653230 | MtrunA17_Chr8g0339051 | 34.815 | 135 | 81 | 2 | 117 | 244 | 129 | 263 | 1.24e-24 | 104 |
| Msa0653230 | MtrunA17_Chr2g0289701 | 35.294 | 153 | 90 | 3 | 421 | 570 | 134 | 280 | 6.04e-26 | 108 |
| Msa0653230 | MtrunA17_Chr2g0289701 | 33.333 | 153 | 87 | 3 | 119 | 262 | 134 | 280 | 1.01e-23 | 102 |
| Msa0653230 | MtrunA17_Chr1g0188091 | 37.190 | 121 | 70 | 1 | 425 | 545 | 179 | 293 | 1.57e-25 | 108 |
| Msa0653230 | MtrunA17_Chr1g0188091 | 29.834 | 181 | 99 | 5 | 117 | 289 | 173 | 333 | 9.27e-22 | 97.8 |
| Msa0653230 | MtrunA17_Chr1g0184881 | 26.275 | 255 | 153 | 7 | 350 | 588 | 110 | 345 | 2.26e-25 | 107 |
| Msa0653230 | MtrunA17_Chr1g0184881 | 27.434 | 226 | 118 | 8 | 86 | 289 | 145 | 346 | 1.97e-22 | 99.0 |
| Msa0653230 | MtrunA17_Chr7g0234691 | 37.121 | 132 | 81 | 2 | 420 | 550 | 170 | 300 | 1.42e-24 | 105 |
| Msa0653230 | MtrunA17_Chr7g0234691 | 34.586 | 133 | 79 | 3 | 117 | 242 | 169 | 300 | 1.50e-20 | 93.2 |
| Msa0653230 | MtrunA17_Chr7g0260551 | 35.938 | 128 | 76 | 1 | 425 | 552 | 164 | 285 | 1.47e-24 | 105 |
| Msa0653230 | MtrunA17_Chr7g0260551 | 35.000 | 120 | 66 | 2 | 131 | 244 | 172 | 285 | 1.95e-21 | 96.3 |
| Msa0653230 | MtrunA17_Chr8g0384101 | 29.787 | 141 | 96 | 2 | 423 | 560 | 84 | 224 | 2.08e-23 | 100 |
| Msa0653230 | MtrunA17_Chr8g0384101 | 32.258 | 124 | 77 | 2 | 121 | 237 | 84 | 207 | 1.45e-21 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653230 | AT4G32480.1 | 44.211 | 285 | 141 | 4 | 311 | 595 | 21 | 287 | 4.89e-77 | 246 |
| Msa0653230 | AT4G32480.1 | 45.946 | 259 | 115 | 5 | 36 | 274 | 21 | 274 | 2.56e-72 | 234 |
| Msa0653230 | AT2G20670.1 | 46.610 | 236 | 121 | 4 | 363 | 595 | 61 | 294 | 2.58e-70 | 229 |
| Msa0653230 | AT2G20670.1 | 46.018 | 226 | 111 | 5 | 61 | 277 | 61 | 284 | 2.89e-63 | 210 |
| Msa0653230 | AT3G07350.1 | 39.865 | 148 | 88 | 1 | 412 | 558 | 126 | 273 | 1.77e-35 | 135 |
| Msa0653230 | AT3G07350.1 | 39.394 | 132 | 74 | 1 | 119 | 244 | 135 | 266 | 1.57e-32 | 127 |
| Msa0653230 | AT4G14620.1 | 33.500 | 200 | 107 | 4 | 354 | 552 | 94 | 268 | 1.25e-30 | 123 |
| Msa0653230 | AT4G14620.1 | 38.281 | 128 | 67 | 3 | 123 | 244 | 147 | 268 | 3.11e-26 | 110 |
| Msa0653230 | AT3G25240.1 | 30.000 | 210 | 140 | 3 | 350 | 552 | 38 | 247 | 1.59e-28 | 115 |
| Msa0653230 | AT3G25240.1 | 32.701 | 211 | 122 | 7 | 62 | 257 | 52 | 257 | 3.02e-26 | 108 |
| Msa0653230 | AT2G39650.2 | 29.050 | 179 | 122 | 1 | 373 | 551 | 5 | 178 | 2.76e-28 | 113 |
| Msa0653230 | AT2G39650.2 | 32.331 | 133 | 84 | 1 | 117 | 243 | 46 | 178 | 1.63e-25 | 105 |
| Msa0653230 | AT2G39650.1 | 27.807 | 187 | 127 | 2 | 365 | 551 | 62 | 240 | 5.31e-28 | 114 |
| Msa0653230 | AT2G39650.1 | 26.699 | 206 | 128 | 3 | 44 | 243 | 52 | 240 | 1.17e-25 | 107 |
| Msa0653230 | AT3G22970.2 | 36.719 | 128 | 75 | 1 | 425 | 552 | 61 | 182 | 6.12e-27 | 110 |
| Msa0653230 | AT3G22970.2 | 35.938 | 128 | 70 | 2 | 123 | 244 | 61 | 182 | 6.68e-24 | 101 |
| Msa0653230 | AT2G38820.2 | 34.109 | 129 | 79 | 2 | 422 | 550 | 160 | 282 | 1.32e-26 | 110 |
| Msa0653230 | AT2G38820.2 | 28.070 | 228 | 139 | 7 | 21 | 242 | 74 | 282 | 5.46e-25 | 106 |
| Msa0653230 | AT3G22970.1 | 37.302 | 126 | 73 | 1 | 425 | 550 | 172 | 291 | 6.42e-26 | 110 |
| Msa0653230 | AT3G22970.1 | 37.607 | 117 | 61 | 2 | 132 | 242 | 181 | 291 | 6.98e-23 | 101 |
| Msa0653230 | AT1G62420.1 | 31.655 | 139 | 88 | 2 | 423 | 559 | 110 | 243 | 2.33e-23 | 100 |
| Msa0653230 | AT1G62420.1 | 30.935 | 139 | 83 | 3 | 121 | 251 | 110 | 243 | 1.17e-20 | 92.8 |
| Msa0653230 | AT1G12030.1 | 32.061 | 131 | 82 | 2 | 423 | 552 | 112 | 236 | 2.03e-22 | 98.2 |
| Msa0653230 | AT1G12030.1 | 31.298 | 131 | 77 | 3 | 121 | 244 | 112 | 236 | 5.71e-19 | 88.2 |
| Msa0653230 | AT3G54550.1 | 29.371 | 143 | 91 | 2 | 422 | 560 | 145 | 281 | 4.46e-22 | 97.1 |
| Msa0653230 | AT3G54550.1 | 28.671 | 143 | 86 | 3 | 120 | 252 | 145 | 281 | 1.48e-19 | 89.7 |
| Msa0653230 | AT1G77160.2 | 29.412 | 136 | 84 | 2 | 422 | 545 | 26 | 161 | 3.60e-19 | 86.7 |
| Msa0653230 | AT1G77160.2 | 29.412 | 136 | 78 | 3 | 120 | 237 | 26 | 161 | 1.75e-17 | 82.0 |
| Msa0653230 | AT1G77160.1 | 29.412 | 136 | 84 | 2 | 422 | 545 | 81 | 216 | 7.83e-19 | 87.0 |
| Msa0653230 | AT1G77160.1 | 29.412 | 136 | 78 | 3 | 120 | 237 | 81 | 216 | 3.85e-17 | 82.0 |
| Msa0653230 | AT1G77145.1 | 29.412 | 136 | 84 | 2 | 422 | 545 | 76 | 211 | 1.45e-18 | 86.3 |
| Msa0653230 | AT1G77145.1 | 29.167 | 144 | 84 | 3 | 120 | 245 | 76 | 219 | 3.95e-17 | 82.0 |
| Msa0653230 | AT1G77145.2 | 34.343 | 99 | 61 | 1 | 451 | 545 | 56 | 154 | 3.18e-15 | 75.1 |
| Msa0653230 | AT1G77145.2 | 31.776 | 107 | 63 | 2 | 149 | 245 | 56 | 162 | 5.45e-13 | 68.6 |
Find 102 sgRNAs with CRISPR-Local
Find 708 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAGAGAAAGGAGATATT+AGG | 0.188794 | 4_3:-61162258 | Msa0653230:CDS |
| AATGGTTAGGTCCATTTAAA+AGG | 0.208758 | 4_3:-61162021 | Msa0653230:CDS |
| ACAAAGAGAAAGGAGATATT+AGG | 0.221131 | 4_3:-61172164 | Msa0653230:CDS |
| CCCATTGCCTCCTTTAATTT+CGG | 0.245301 | 4_3:-61161723 | Msa0653230:three_prime_UTR |
| GTTGTGTAAATTGTTATTAT+TGG | 0.258009 | 4_3:-61161869 | Msa0653230:exon |
| AGTGGTTAGGTCCATTTAAA+AGG | 0.261572 | 4_3:-61171927 | Msa0653230:CDS |
| TTCAACTAATTCACTTTCAT+TGG | 0.273663 | 4_3:-61171899 | Msa0653230:CDS |
| GTGCAATTTGTAATACTAAA+TGG | 0.278765 | 4_3:-61172747 | Msa0653230:CDS |
| GTACCATTTGTAATACTAAA+TGG | 0.280390 | 4_3:-61162997 | Msa0653230:CDS |
| TTTAACAAATTCACTTTCAT+TGG | 0.286998 | 4_3:-61161993 | Msa0653230:CDS |
| TTGTTATTGGCCGAAATTAA+AGG | 0.291288 | 4_3:+61161713 | None:intergenic |
| GATGCCTTTGGCTTCTGCTT+TGG | 0.308657 | 4_3:+61161947 | None:intergenic |
| GATGCCTTTGGCTTCTGCTT+TGG | 0.309443 | 4_3:+61171853 | None:intergenic |
| AAGGTGGAAACTTAGTTAAT+TGG | 0.322250 | 4_3:-61161844 | Msa0653230:three_prime_UTR |
| CTTTCGAGCACAATTTGAAA+TGG | 0.323175 | 4_3:-61172124 | Msa0653230:CDS |
| ATAAATACATGCAAGCTAAA+TGG | 0.328450 | 4_3:-61162039 | Msa0653230:CDS |
| GAGGCAATGGGGTGTAATTA+AGG | 0.331668 | 4_3:+61161735 | None:intergenic |
| CAACAGAACTTGTTCTATAT+AGG | 0.334794 | 4_3:+61172926 | None:intergenic |
| GATGATTGTGATGTGGGTTT+TGG | 0.352300 | 4_3:-61173225 | Msa0653230:CDS |
| CAACAGAACTTGTTCTGTAT+AGG | 0.353289 | 4_3:+61163176 | None:intergenic |
| TTAACAGCAGTATGCACATT+AGG | 0.362716 | 4_3:+61161893 | None:intergenic |
| CAAAGAGAAAGGAGATATTA+GGG | 0.363806 | 4_3:-61162257 | Msa0653230:CDS |
| GTGTTGAATAATTATATTAT+CGG | 0.371885 | 4_3:+61161762 | None:intergenic |
| GATGATTGTGATGTGGGTTT+AGG | 0.377840 | 4_3:-61163643 | Msa0653230:CDS |
| ATAGCAGTACAATGCATATC+AGG | 0.379730 | 4_3:+61171799 | None:intergenic |
| ACGGTTAACATTGATGCCTT+TGG | 0.384691 | 4_3:+61161935 | None:intergenic |
| CAAAGAGAAAGGAGATATTA+GGG | 0.395680 | 4_3:-61172163 | Msa0653230:CDS |
| GTCTCTAGCCGGCTTCAAAA+TGG | 0.405144 | 4_3:-61172781 | Msa0653230:CDS |
| ACAGTTAACATCGATGCCTT+TGG | 0.407087 | 4_3:+61171841 | None:intergenic |
| ACTTGTCTCATAAAACAGTT+TGG | 0.416082 | 4_3:+61172802 | None:intergenic |
| TTTCTTGATGATTGTGATGT+GGG | 0.416102 | 4_3:-61173231 | Msa0653230:CDS |
| TCAACTAATTCACTTTCATT+GGG | 0.420472 | 4_3:-61171898 | Msa0653230:CDS |
| AAAACAGTTTGGACATGATC+TGG | 0.423620 | 4_3:+61172813 | None:intergenic |
| CATAATCAAGATTATGTGTA+TGG | 0.427742 | 4_3:-61162116 | Msa0653230:CDS |
| TTTCTTGATGATTGTGATGT+GGG | 0.428946 | 4_3:-61163649 | Msa0653230:CDS |
| TTAACAAATTCACTTTCATT+GGG | 0.435046 | 4_3:-61161992 | Msa0653230:CDS |
| CCTAGTCACTCGTGCTAAAG+AGG | 0.444536 | 4_3:+61173341 | None:intergenic |
| TTTCGAGCACAATTTGAAAT+GGG | 0.447302 | 4_3:-61172123 | Msa0653230:CDS |
| TTACCTGCAAAAGCTGAAGT+TGG | 0.467608 | 4_3:+61173070 | None:intergenic |
| TGTTGAATAATTATATTATC+GGG | 0.472954 | 4_3:+61161763 | None:intergenic |
| CTTTCGAGCACAATTTGAGA+TGG | 0.476688 | 4_3:-61162218 | Msa0653230:CDS |
| AATTTACATAATCTTCCATC+AGG | 0.482120 | 4_3:-61162971 | Msa0653230:intron |
| CCGAAATTAAAGGAGGCAAT+GGG | 0.485958 | 4_3:+61161723 | None:intergenic |
| GATCAATTACCTGCAAAAGC+TGG | 0.486219 | 4_3:+61163485 | None:intergenic |
| TGTCCATTTAGTATTACAAA+TGG | 0.491365 | 4_3:+61162994 | None:intergenic |
| GGCAGCTAAAAGGTGTTTGA+AGG | 0.493144 | 4_3:-61172001 | Msa0653230:intron |
| TCTAGCCAGCTTCAAAATGC+TGG | 0.497976 | 4_3:-61163028 | Msa0653230:CDS |
| AAAACAATGTCGACATGAGC+TGG | 0.499730 | 4_3:+61163063 | None:intergenic |
| GTTTCATCATGATAATCATA+TGG | 0.507505 | 4_3:-61163599 | Msa0653230:CDS |
| ATTGTTATTATTGGTCAAGG+TGG | 0.508175 | 4_3:-61161860 | Msa0653230:three_prime_UTR |
| TACATGCAAGCTAAATGGTT+AGG | 0.510493 | 4_3:-61162034 | Msa0653230:CDS |
| TTTCGAGCACAATTTGAGAT+GGG | 0.513578 | 4_3:-61162217 | Msa0653230:CDS |
| GTTCTGTTGAAATAAGCATA+AGG | 0.516383 | 4_3:-61163162 | Msa0653230:CDS |
| GTTCTGTTGAAATAAGCATA+AGG | 0.516383 | 4_3:-61172912 | Msa0653230:CDS |
| TACATGCAAGCTAAGTGGTT+AGG | 0.517313 | 4_3:-61171940 | Msa0653230:CDS |
| CAATATGCAGACACAAATCT+TGG | 0.517358 | 4_3:-61173270 | Msa0653230:CDS |
| GTGACTAGGTATTTGCCAGC+TGG | 0.519709 | 4_3:-61173327 | Msa0653230:CDS |
| TCATGATAATCATATGGAGT+TGG | 0.523947 | 4_3:-61163593 | Msa0653230:CDS |
| ATTTCTTGATGATTGTGATG+TGG | 0.528604 | 4_3:-61163650 | Msa0653230:CDS |
| TTATGAGACAAGTCTCTAGC+CGG | 0.532509 | 4_3:-61172792 | Msa0653230:CDS |
| GCCGAAATTAAAGGAGGCAA+TGG | 0.534975 | 4_3:+61161722 | None:intergenic |
| AGTTCACATAATCTTCCATC+AGG | 0.535138 | 4_3:-61172721 | Msa0653230:intron |
| CATAGTACAAACAAAGAGAA+AGG | 0.536396 | 4_3:-61172174 | Msa0653230:CDS |
| CCTCTTTAGCACGAGTGACT+AGG | 0.537423 | 4_3:-61173341 | Msa0653230:CDS |
| TATAATACAAGCAAAGAGAA+AGG | 0.545101 | 4_3:-61162268 | Msa0653230:CDS |
| TTACCTGCAAAAGCTGGAGT+TGG | 0.546418 | 4_3:+61163491 | None:intergenic |
| AAACTGCCTGAGGTTTATGT+AGG | 0.548204 | 4_3:-61162160 | Msa0653230:CDS |
| AAACTCCCTGAAGTTTATGT+AGG | 0.550710 | 4_3:-61172066 | Msa0653230:CDS |
| AGAACTTGTTCTGTATAGGT+TGG | 0.552925 | 4_3:+61163180 | None:intergenic |
| TGCAACGAAAGAAGCAATTG+AGG | 0.553944 | 4_3:-61172887 | Msa0653230:CDS |
| TAAATTGTTATTATTGGTCA+AGG | 0.557955 | 4_3:-61161863 | Msa0653230:three_prime_UTR |
| CAATATGCAGACACAAGTCT+TGG | 0.570833 | 4_3:-61163688 | Msa0653230:CDS |
| ATAAATACATGCAAGCTAAG+TGG | 0.576303 | 4_3:-61171945 | Msa0653230:CDS |
| CAGGGAGTTTCCTCACAAGA+CGG | 0.597063 | 4_3:+61172079 | None:intergenic |
| AAATGTGAGAGGGTTAATGA+AGG | 0.598347 | 4_3:-61163550 | Msa0653230:CDS |
| AAATTGGAGTGCATTTGCAG+TGG | 0.605257 | 4_3:-61163100 | Msa0653230:CDS |
| TGAAATGGGAAAAGCAAGTG+AGG | 0.611127 | 4_3:-61172109 | Msa0653230:CDS |
| ACAAAATGCACATGGGACCA+TGG | 0.611544 | 4_3:-61162069 | Msa0653230:CDS |
| ACAAAATGCACATGGGACCA+TGG | 0.611544 | 4_3:-61171975 | Msa0653230:CDS |
| AGATGATGATAAATGTGAGA+GGG | 0.614187 | 4_3:-61163560 | Msa0653230:CDS |
| AATATTCTCTAATAAATCAA+CGG | 0.615399 | 4_3:+61161916 | None:intergenic |
| AAGATGATGATAAATGTGAG+AGG | 0.616437 | 4_3:-61163561 | Msa0653230:CDS |
| TCTAGCCGGCTTCAAAATGG+TGG | 0.622324 | 4_3:-61172778 | Msa0653230:CDS |
| TAATCCAAAGCAGAAGCCAA+AGG | 0.630360 | 4_3:-61171857 | Msa0653230:CDS |
| TTTCATTGGGATATTCTGAG+AGG | 0.630945 | 4_3:-61161979 | Msa0653230:CDS |
| GAAGGAAAACAAAATGCACA+TGG | 0.638628 | 4_3:-61171983 | Msa0653230:CDS |
| TAATGAAGGTTGTAACAATG+AGG | 0.638786 | 4_3:-61173115 | Msa0653230:intron |
| CAGGCAGTTTCCTCACAAGA+CGG | 0.640039 | 4_3:+61162173 | None:intergenic |
| TAGTCCAAAGCAGAAGCCAA+AGG | 0.641419 | 4_3:-61161951 | Msa0653230:CDS |
| AATGGGGTGTAATTAAGGAA+AGG | 0.642678 | 4_3:+61161740 | None:intergenic |
| AATTCCCTACGAAAACCAGC+TGG | 0.645424 | 4_3:+61173312 | None:intergenic |
| GAAAGAAAACAAAATGCACA+TGG | 0.645963 | 4_3:-61162077 | Msa0653230:CDS |
| AAGACTATAACCGTCTTGTG+AGG | 0.648618 | 4_3:-61162183 | Msa0653230:CDS |
| TTATTGGCCGAAATTAAAGG+AGG | 0.652915 | 4_3:+61161716 | None:intergenic |
| AGGACTATAACCGTCTTGTG+AGG | 0.659267 | 4_3:-61172089 | Msa0653230:CDS |
| TCTTGTGAGGAAACTGCCTG+AGG | 0.665039 | 4_3:-61162170 | Msa0653230:CDS |
| CGAAATTAAAGGAGGCAATG+GGG | 0.670680 | 4_3:+61161724 | None:intergenic |
| AAAGAAAACAAAATGCACAT+GGG | 0.675749 | 4_3:-61162076 | Msa0653230:CDS |
| TGCATTTGCAGTGGACAGAG+TGG | 0.676752 | 4_3:-61163091 | Msa0653230:CDS |
| AAAGGCATCGATGTTAACTG+TGG | 0.685100 | 4_3:-61171839 | Msa0653230:CDS |
| TGTAGTTGTAGTAGACAGAG+CGG | 0.712114 | 4_3:-61172841 | Msa0653230:CDS |
| AAGGAAAACAAAATGCACAT+GGG | 0.713631 | 4_3:-61171982 | Msa0653230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAGAAACTAAAT+TGG | - | chr4_3:61163635-61163654 | Msa0653230:CDS | 10.0% |
| !!! | TAATTTTTTTTTTCTAACTT+TGG | - | chr4_3:61169085-61169104 | Msa0653230:intron | 10.0% |
| !!! | AACTAAATTAAACTTTTTTT+AGG | + | chr4_3:61169256-61169275 | None:intergenic | 10.0% |
| !!! | ATTTGTTATCATTTTTTTTA+TGG | + | chr4_3:61170026-61170045 | None:intergenic | 10.0% |
| !! | AAATAAAATTTAAACAAAAG+TGG | - | chr4_3:61170104-61170123 | Msa0653230:intron | 10.0% |
| !! | TTGAAAAAATAATGTATATA+TGG | + | chr4_3:61170368-61170387 | None:intergenic | 10.0% |
| !!! | TTTTGAAAAAATATCAATTA+AGG | + | chr4_3:61170426-61170445 | None:intergenic | 10.0% |
| !!! | ATTAGCTATTTTAATAATAA+TGG | - | chr4_3:61172411-61172430 | Msa0653230:intron | 10.0% |
| !!! | TATTTTAATAATAATGGATT+AGG | - | chr4_3:61172417-61172436 | Msa0653230:intron | 10.0% |
| !!! | TTTTTATAATCTATAACAAA+CGG | - | chr4_3:61172663-61172682 | Msa0653230:intron | 10.0% |
| !!! | TATTTTCTTAATCAATTTTG+AGG | - | chr4_3:61162065-61162084 | Msa0653230:CDS | 15.0% |
| !! | AATAGATTAGTGATTTAAAA+AGG | + | chr4_3:61162549-61162568 | None:intergenic | 15.0% |
| !! | TCAACAATAACAAAAAATTA+AGG | - | chr4_3:61162706-61162725 | Msa0653230:intron | 15.0% |
| !!! | TGATACTATTTTTTGTTTTT+TGG | - | chr4_3:61163309-61163328 | Msa0653230:intron | 15.0% |
| !! | AATTATTTATAGCAATACAT+AGG | - | chr4_3:61163419-61163438 | Msa0653230:intron | 15.0% |
| !!! | ACATTGTTTTTTTTTTTGAA+AGG | - | chr4_3:61163488-61163507 | Msa0653230:intron | 15.0% |
| !!! | ATCTTTATTTTTACCTAAAA+AGG | + | chr4_3:61163614-61163633 | None:intergenic | 15.0% |
| !!! | ATATGTGAAATTTTTATGTT+GGG | + | chr4_3:61164334-61164353 | None:intergenic | 15.0% |
| !!! | TATATGTGAAATTTTTATGT+TGG | + | chr4_3:61164335-61164354 | None:intergenic | 15.0% |
| !! | TTAATGTCATATTATGAATT+GGG | + | chr4_3:61166317-61166336 | None:intergenic | 15.0% |
| !!! | TATGTTTTCTTTTTTTTTAG+TGG | - | chr4_3:61169324-61169343 | Msa0653230:intron | 15.0% |
| !! | ATTAATTAATATGATTCAGA+TGG | + | chr4_3:61169650-61169669 | None:intergenic | 15.0% |
| !! | TTAAAAAATCAATGTATATG+TGG | - | chr4_3:61170130-61170149 | Msa0653230:intron | 15.0% |
| !!! | TGAAAAATTTTAAACAAAAG+TGG | + | chr4_3:61170205-61170224 | None:intergenic | 15.0% |
| !!! | TGTTTAAAATTTTTCAAAAG+TGG | - | chr4_3:61170209-61170228 | Msa0653230:intron | 15.0% |
| !! | TAAAAATATATCAATTAGAG+TGG | + | chr4_3:61170261-61170280 | None:intergenic | 15.0% |
| !! | ATAAAAATATATCAATTAGG+TGG | + | chr4_3:61170345-61170364 | None:intergenic | 15.0% |
| !! | TGGATAAAAATATATCAATT+AGG | + | chr4_3:61170265-61170284 | None:intergenic | 15.0% |
| !!! | AATTGATATTTTTTCAAAAG+TGG | - | chr4_3:61170427-61170446 | Msa0653230:intron | 15.0% |
| !!! | AATTTCTATAAACAAACTTT+TGG | + | chr4_3:61170811-61170830 | None:intergenic | 15.0% |
| !! | TTATAGAAATTAACTAATGT+TGG | - | chr4_3:61170820-61170839 | Msa0653230:intron | 15.0% |
| !! | AATCTTAATTAATAACCAAT+TGG | - | chr4_3:61171115-61171134 | Msa0653230:intron | 15.0% |
| !! | ATCTTAATTAATAACCAATT+GGG | - | chr4_3:61171116-61171135 | Msa0653230:intron | 15.0% |
| !! | AAATATAGATCATAAATCAA+TGG | + | chr4_3:61171610-61171629 | None:intergenic | 15.0% |
| !! | AAATAAATTATCACAATTCA+AGG | + | chr4_3:61171694-61171713 | None:intergenic | 15.0% |
| !!! | TTATTAGCTTTATTTTTTAG+AGG | - | chr4_3:61171828-61171847 | Msa0653230:CDS | 15.0% |
| !!! | TATATTTTTTCAAAAGTAAC+AGG | - | chr4_3:61172453-61172472 | Msa0653230:intron | 15.0% |
| !!! | CTATTTAATTTCAAAATGTA+AGG | + | chr4_3:61172690-61172709 | None:intergenic | 15.0% |
| !! | ATTATAATAGTGTAATTGTT+AGG | + | chr4_3:61172749-61172768 | None:intergenic | 15.0% |
| !! | AATATTCTCTAATAAATCAA+CGG | + | chr4_3:61173157-61173176 | None:intergenic | 15.0% |
| !! | TGTTGAATAATTATATTATC+GGG | + | chr4_3:61173310-61173329 | None:intergenic | 15.0% |
| !! | GTGTTGAATAATTATATTAT+CGG | + | chr4_3:61173311-61173330 | None:intergenic | 15.0% |
| !! | AAGGTCAAAATATATCATAT+GGG | + | chr4_3:61162521-61162540 | None:intergenic | 20.0% |
| !! | TAAGGTCAAAATATATCATA+TGG | + | chr4_3:61162522-61162541 | None:intergenic | 20.0% |
| !! | AAATGATCCTGATTAATAAT+AGG | + | chr4_3:61162594-61162613 | None:intergenic | 20.0% |
| !! | TATATTGACAAGAATGTATT+AGG | - | chr4_3:61162616-61162635 | Msa0653230:intron | 20.0% |
| !!! | TAACAAAAAATTAAGGTGTT+AGG | - | chr4_3:61162713-61162732 | Msa0653230:intron | 20.0% |
| !!! | TTTTTTGTTTTTTGGTAGAT+AGG | - | chr4_3:61163317-61163336 | Msa0653230:intron | 20.0% |
| !!! | TTTTTTATTTCTAGTGAGAA+AGG | - | chr4_3:61163359-61163378 | Msa0653230:intron | 20.0% |
| !!! | TGTATATCTTATTTGATCTT+GGG | + | chr4_3:61163467-61163486 | None:intergenic | 20.0% |
| !! | GAAAAACAATCTTTATTAAG+TGG | + | chr4_3:61163725-61163744 | None:intergenic | 20.0% |
| !!! | AAATTTTTATGTTGGGAAAA+CGG | + | chr4_3:61164327-61164346 | None:intergenic | 20.0% |
| !! | CACTTCTTAAAAATCATAAA+TGG | - | chr4_3:61164387-61164406 | Msa0653230:intron | 20.0% |
| !!! | TATTTTTGTTATCTTTCTAG+TGG | + | chr4_3:61165551-61165570 | None:intergenic | 20.0% |
| !! | GATTTATAAAACTTGAGTTA+TGG | + | chr4_3:61166077-61166096 | None:intergenic | 20.0% |
| !! | GTTAATGTCATATTATGAAT+TGG | + | chr4_3:61166318-61166337 | None:intergenic | 20.0% |
| !! | AATTTCATTTAACATGTTGT+AGG | + | chr4_3:61166436-61166455 | None:intergenic | 20.0% |
| !! | AAGAGAAAATAAATAGGTTA+AGG | + | chr4_3:61166663-61166682 | None:intergenic | 20.0% |
| !! | GGAATTAAGAGAAAATAAAT+AGG | + | chr4_3:61166669-61166688 | None:intergenic | 20.0% |
| !! | TCTCCACTAAATAATAAAAT+AGG | - | chr4_3:61166746-61166765 | Msa0653230:intron | 20.0% |
| !! | CTCCACTAAATAATAAAATA+GGG | - | chr4_3:61166747-61166766 | Msa0653230:intron | 20.0% |
| !! | TCCACTAAATAATAAAATAG+GGG | - | chr4_3:61166748-61166767 | Msa0653230:intron | 20.0% |
| !!! | TTAAGGTATTTAGATACTAA+AGG | - | chr4_3:61167771-61167790 | Msa0653230:intron | 20.0% |
| !! | ACAAAAAATAGAAGATCTTT+AGG | - | chr4_3:61167957-61167976 | Msa0653230:intron | 20.0% |
| !! | TCTTTATCTTGTCTATTATT+TGG | - | chr4_3:61168284-61168303 | Msa0653230:intron | 20.0% |
| !!! | TTTGTGGTTATTTTTGTTAT+TGG | - | chr4_3:61168370-61168389 | Msa0653230:intron | 20.0% |
| !!! | TTTTGTTATTGGTAATGTTA+TGG | - | chr4_3:61168381-61168400 | Msa0653230:intron | 20.0% |
| !! | AACATTAATTTACAACCTTA+AGG | + | chr4_3:61168880-61168899 | None:intergenic | 20.0% |
| !!! | ATTTTAGCCTGTTAAAAAAA+AGG | - | chr4_3:61169019-61169038 | Msa0653230:intron | 20.0% |
| !!! | TTTTAGCCTGTTAAAAAAAA+GGG | - | chr4_3:61169020-61169039 | Msa0653230:intron | 20.0% |
| !! | AAAATTTGAGTGTTAATACA+AGG | + | chr4_3:61169112-61169131 | None:intergenic | 20.0% |
| !!! | TCATTTTGAAACAATTACAT+AGG | + | chr4_3:61169152-61169171 | None:intergenic | 20.0% |
| !! | GAAACTTAAAACTCTAATTT+GGG | + | chr4_3:61169212-61169231 | None:intergenic | 20.0% |
| !! | TGAAACTTAAAACTCTAATT+TGG | + | chr4_3:61169213-61169232 | None:intergenic | 20.0% |
| !!! | ATAAAACAACTTTTATTACG+AGG | + | chr4_3:61169491-61169510 | None:intergenic | 20.0% |
| !!! | CGTAATAAAAGTTGTTTTAT+TGG | - | chr4_3:61169491-61169510 | Msa0653230:intron | 20.0% |
| !! | AAATTGTTCAGATAAAGATT+TGG | - | chr4_3:61169771-61169790 | Msa0653230:intron | 20.0% |
| !!! | GTTCATACTAATTGATTTAA+AGG | + | chr4_3:61169960-61169979 | None:intergenic | 20.0% |
| !! | ATAATTTAATGTAAAGTTCG+AGG | - | chr4_3:61169985-61170004 | Msa0653230:intron | 20.0% |
| !!! | TGTTATCATTTTTTTTATGG+TGG | + | chr4_3:61170023-61170042 | None:intergenic | 20.0% |
| !! | AGCCATCTAAAAAAATTTAA+CGG | + | chr4_3:61170053-61170072 | None:intergenic | 20.0% |
| !!! | AATTTTATTTAAGAGAGAGT+AGG | + | chr4_3:61170094-61170113 | None:intergenic | 20.0% |
| !! | AAAATATATTTCAATCCAAG+TGG | - | chr4_3:61170156-61170175 | Msa0653230:intron | 20.0% |
| !! | AATATATCAATATATCCACT+TGG | + | chr4_3:61170174-61170193 | None:intergenic | 20.0% |
| !!! | ATTTTTATCCACATATACAT+TGG | - | chr4_3:61170274-61170293 | Msa0653230:intron | 20.0% |
| !! | TGAAAAAATATCAATTAAGG+TGG | + | chr4_3:61170423-61170442 | None:intergenic | 20.0% |
| !!! | GTTTATTTCTAGTAGAATTT+TGG | - | chr4_3:61170711-61170730 | Msa0653230:intron | 20.0% |
| !! | AAATTAACTAATGTTGGATT+AGG | - | chr4_3:61170826-61170845 | Msa0653230:intron | 20.0% |
| !! | AGAGAAAGCTAATATTATTA+TGG | + | chr4_3:61171026-61171045 | None:intergenic | 20.0% |
| !! | AGATTAGAAAAATCATCAAA+GGG | + | chr4_3:61171210-61171229 | None:intergenic | 20.0% |
| !! | AAGATTAGAAAAATCATCAA+AGG | + | chr4_3:61171211-61171230 | None:intergenic | 20.0% |
| !! | ATTAGAATCAAACATAATCA+TGG | - | chr4_3:61171282-61171301 | Msa0653230:intron | 20.0% |
| !! | TTAGAATCAAACATAATCAT+GGG | - | chr4_3:61171283-61171302 | Msa0653230:intron | 20.0% |
| !! | TTTACAACTTCATGATAAAA+AGG | - | chr4_3:61171736-61171755 | Msa0653230:intron | 20.0% |
| !! | GAAGCAATTGAAAAAATAAA+TGG | - | chr4_3:61171943-61171962 | Msa0653230:CDS | 20.0% |
| !! | AAAAATAAATGGATCGAAAT+TGG | - | chr4_3:61171954-61171973 | Msa0653230:CDS | 20.0% |
| !! | AATTAAATCAAATTACCTGA+TGG | + | chr4_3:61172117-61172136 | None:intergenic | 20.0% |
| !! | AATTAAATCAAATTACCTGA+TGG | + | chr4_3:61172117-61172136 | None:intergenic | 20.0% |
| !!! | ATCTTTTTCATTTTTTGAGA+CGG | - | chr4_3:61172259-61172278 | Msa0653230:intron | 20.0% |
| !!! | ATAATAATGGATTAGGTATT+AGG | - | chr4_3:61172424-61172443 | Msa0653230:intron | 20.0% |
| !!! | GAGTAACTTTTTTTAATAAG+AGG | + | chr4_3:61172480-61172499 | None:intergenic | 20.0% |
| !!! | TCTAAGATGTTATGTTTTTT+TGG | - | chr4_3:61172498-61172517 | Msa0653230:intron | 20.0% |
| !! | AATCAAGAGGAAAAAATTTA+GGG | - | chr4_3:61172542-61172561 | Msa0653230:intron | 20.0% |
| !! | TTACACTATTATAATTATGC+AGG | - | chr4_3:61172754-61172773 | Msa0653230:CDS | 20.0% |
| !! | TACACTATTATAATTATGCA+GGG | - | chr4_3:61172755-61172774 | Msa0653230:CDS | 20.0% |
| !! | TTTAACAAATTCACTTTCAT+TGG | - | chr4_3:61173077-61173096 | Msa0653230:CDS | 20.0% |
| !! | TTAACAAATTCACTTTCATT+GGG | - | chr4_3:61173078-61173097 | Msa0653230:CDS | 20.0% |
| !!! | GTTGTGTAAATTGTTATTAT+TGG | - | chr4_3:61173201-61173220 | Msa0653230:intron | 20.0% |
| !!! | TAAATTGTTATTATTGGTCA+AGG | - | chr4_3:61173207-61173226 | Msa0653230:intron | 20.0% |
| !!! | TTGGTTTTTTCTTTGTTTTT+TGG | - | chr4_3:61173245-61173264 | Msa0653230:CDS | 20.0% |
| ! | GTTTCATCATGATAATCATA+TGG | - | chr4_3:61161889-61161908 | Msa0653230:CDS | 25.0% |
| !! | ATGAGGAGAATAGAAATTTT+TGG | - | chr4_3:61161972-61161991 | Msa0653230:CDS | 25.0% |
| !! | TGAGGAGAATAGAAATTTTT+GGG | - | chr4_3:61161973-61161992 | Msa0653230:CDS | 25.0% |
| ! | TTGTGTTGTGTTAACAAAAT+TGG | - | chr4_3:61162100-61162119 | Msa0653230:CDS | 25.0% |
| ! | GTGCAATTTGTAATACTAAA+TGG | - | chr4_3:61162323-61162342 | Msa0653230:intron | 25.0% |
| ! | GTGATTTAAAAAGGACTATA+AGG | + | chr4_3:61162540-61162559 | None:intergenic | 25.0% |
| ! | CATAATCAAGATTATGTGTA+TGG | - | chr4_3:61163048-61163067 | Msa0653230:CDS | 25.0% |
| !! | ATGTATTTATGTTTTCTCCA+TGG | + | chr4_3:61163115-61163134 | None:intergenic | 25.0% |
| ! | TTCAACTAATTCACTTTCAT+TGG | - | chr4_3:61163171-61163190 | Msa0653230:CDS | 25.0% |
| ! | TCAACTAATTCACTTTCATT+GGG | - | chr4_3:61163172-61163191 | Msa0653230:CDS | 25.0% |
| !! | GTGTATATCTTATTTGATCT+TGG | + | chr4_3:61163468-61163487 | None:intergenic | 25.0% |
| !! | CATATTGTTGTTGATTGATA+AGG | - | chr4_3:61163521-61163540 | Msa0653230:CDS | 25.0% |
| !! | TCTACTATTTGTACCTTTTT+AGG | - | chr4_3:61163598-61163617 | Msa0653230:CDS | 25.0% |
| ! | TTAAGAAACTAAATTGGTAC+CGG | - | chr4_3:61163641-61163660 | Msa0653230:CDS | 25.0% |
| !!! | GATTGTTTTTCTTAAGTTCA+AGG | - | chr4_3:61163734-61163753 | Msa0653230:intron | 25.0% |
| ! | ACAATTCATCCTTCATAAAT+TGG | - | chr4_3:61164418-61164437 | Msa0653230:intron | 25.0% |
| ! | TTATGTTGACCAATTTATGA+AGG | + | chr4_3:61164430-61164449 | None:intergenic | 25.0% |
| !! | TTCAACAACATAATTAGTCT+TGG | - | chr4_3:61164479-61164498 | Msa0653230:intron | 25.0% |
| !!! | CATGACTATGATTTAGTTTT+TGG | + | chr4_3:61164538-61164557 | None:intergenic | 25.0% |
| ! | GATTTATGATGTTGATATTG+AGG | + | chr4_3:61164865-61164884 | None:intergenic | 25.0% |
| ! | CTTATATGACTCCAATAATT+TGG | - | chr4_3:61165155-61165174 | Msa0653230:intron | 25.0% |
| ! | ATCAATAGTAAACAACAACA+TGG | - | chr4_3:61165217-61165236 | Msa0653230:intron | 25.0% |
| ! | GATTTATAGAACTTGAGTTA+TGG | + | chr4_3:61165701-61165720 | None:intergenic | 25.0% |
| !!! | TATTAGTTTTCTAATGTCGT+TGG | + | chr4_3:61165738-61165757 | None:intergenic | 25.0% |
| ! | GATTTATAGAACTTGAGTTA+TGG | + | chr4_3:61165701-61165720 | None:intergenic | 25.0% |
| ! | AAACGAAAACTGATATTGAT+CGG | + | chr4_3:61165989-61166008 | None:intergenic | 25.0% |
| !! | ATCAGTTTTCGTTTCAAATT+CGG | - | chr4_3:61165995-61166014 | Msa0653230:intron | 25.0% |
| !!! | AAATAGAAACTGGTATTGAT+CGG | + | chr4_3:61166182-61166201 | None:intergenic | 25.0% |
| ! | CCAGTTTCTATTTCAAAATT+CGG | - | chr4_3:61166189-61166208 | Msa0653230:intron | 25.0% |
| ! | CAGTTTCTATTTCAAAATTC+GGG | - | chr4_3:61166190-61166209 | Msa0653230:intron | 25.0% |
| !!! | TTTTGAGAATTGGAGAATTA+GGG | + | chr4_3:61166407-61166426 | None:intergenic | 25.0% |
| !!! | TTTTTGAGAATTGGAGAATT+AGG | + | chr4_3:61166408-61166427 | None:intergenic | 25.0% |
| !!! | TAGGTTTAGTTTTTGAGAAT+TGG | + | chr4_3:61166417-61166436 | None:intergenic | 25.0% |
| !! | TAATCTTGAGTCTATGATTT+TGG | + | chr4_3:61166460-61166479 | None:intergenic | 25.0% |
| !! | AATCAATCAATCTAAGGTAA+GGG | + | chr4_3:61166499-61166518 | None:intergenic | 25.0% |
| ! | AGGTTAAGGTTTATATAAAG+AGG | + | chr4_3:61166649-61166668 | None:intergenic | 25.0% |
| ! | TAGTGGAGAAATATATTTAG+TGG | + | chr4_3:61166735-61166754 | None:intergenic | 25.0% |
| !!! | AAGTTGGTTGATGATTAAAT+TGG | - | chr4_3:61167476-61167495 | Msa0653230:intron | 25.0% |
| !! | TCACAATAAATTTAGAGTCA+AGG | - | chr4_3:61167501-61167520 | Msa0653230:intron | 25.0% |
| ! | GGTAAAATAGTGCTTAAATA+AGG | + | chr4_3:61167700-61167719 | None:intergenic | 25.0% |
| ! | TATTTAGATACTAAAGGTTG+AGG | - | chr4_3:61167777-61167796 | Msa0653230:intron | 25.0% |
| ! | ATTTAGATACTAAAGGTTGA+GGG | - | chr4_3:61167778-61167797 | Msa0653230:intron | 25.0% |
| ! | TTTAGGAAATCAAAGGTTAA+GGG | - | chr4_3:61167974-61167993 | Msa0653230:intron | 25.0% |
| ! | GTAGAAATTATGTTTGTTCT+TGG | - | chr4_3:61168105-61168124 | Msa0653230:intron | 25.0% |
| ! | TGTAAAGAACTCAATGATAA+TGG | - | chr4_3:61168172-61168191 | Msa0653230:intron | 25.0% |
| ! | TCAATGAAATTTAGATTCGT+GGG | + | chr4_3:61168415-61168434 | None:intergenic | 25.0% |
| ! | ATCAATGAAATTTAGATTCG+TGG | + | chr4_3:61168416-61168435 | None:intergenic | 25.0% |
| !!! | AATTGTCCCTTTTTTTTAAC+AGG | + | chr4_3:61169029-61169048 | None:intergenic | 25.0% |
| !!! | GTTTTCTTTTTTTTTAGTGG+TGG | - | chr4_3:61169327-61169346 | Msa0653230:intron | 25.0% |
| !! | TAACTATGTTATTTGACCTA+CGG | + | chr4_3:61169519-61169538 | None:intergenic | 25.0% |
| ! | CATATTAATTAATAGCCACA+TGG | - | chr4_3:61169657-61169676 | Msa0653230:intron | 25.0% |
| !!! | TAATTTATTTCTGATCCATG+TGG | + | chr4_3:61169675-61169694 | None:intergenic | 25.0% |
| ! | AAGGGAAAGAAATATTGTAT+AGG | - | chr4_3:61169728-61169747 | Msa0653230:intron | 25.0% |
| !!! | GATGATGGATATATATTAGT+TGG | + | chr4_3:61169835-61169854 | None:intergenic | 25.0% |
| ! | TAGTCATGTGTTAATTCAAA+GGG | + | chr4_3:61169921-61169940 | None:intergenic | 25.0% |
| !!! | TGCCGTTAAATTTTTTTAGA+TGG | - | chr4_3:61170048-61170067 | Msa0653230:intron | 25.0% |
| ! | AAAATATATATCCTTCCAGA+GGG | + | chr4_3:61170319-61170338 | None:intergenic | 25.0% |
| ! | AAAAATATATATCCTTCCAG+AGG | + | chr4_3:61170320-61170339 | None:intergenic | 25.0% |
| !! | AAAATTGATGCATAACTTGT+TGG | + | chr4_3:61170493-61170512 | None:intergenic | 25.0% |
| ! | GTTTCATCATGATAATCATA+TGG | - | chr4_3:61161889-61161908 | Msa0653230:CDS | 25.0% |
| !! | TATTTTCTTCTTGTGCTAAT+AGG | - | chr4_3:61171648-61171667 | Msa0653230:intron | 25.0% |
| ! | GCACTAAATCAAAATCAATT+TGG | + | chr4_3:61171867-61171886 | None:intergenic | 25.0% |
| ! | GTACCATTTGTAATACTAAA+TGG | - | chr4_3:61172073-61172092 | Msa0653230:CDS | 25.0% |
| ! | TGTCCATTTAGTATTACAAA+TGG | + | chr4_3:61162329-61162348 | None:intergenic | 25.0% |
| ! | AATTTACATAATCTTCCATC+AGG | - | chr4_3:61172099-61172118 | Msa0653230:CDS | 25.0% |
| ! | AATTTACATAATCTTCCATC+AGG | - | chr4_3:61172099-61172118 | Msa0653230:CDS | 25.0% |
| ! | GGTTAAAATATATCATGTGA+GGG | + | chr4_3:61172319-61172338 | None:intergenic | 25.0% |
| ! | AGGTTAAAATATATCATGTG+AGG | + | chr4_3:61172320-61172339 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGGGACTTTTA+AGG | + | chr4_3:61172340-61172359 | None:intergenic | 25.0% |
| ! | TAATGATCCTGATTAATGAT+AGG | + | chr4_3:61172395-61172414 | None:intergenic | 25.0% |
| !!! | CTAAATTTTTTCCTCTTGAT+TGG | + | chr4_3:61172543-61172562 | None:intergenic | 25.0% |
| ! | CAATCAAGAGGAAAAAATTT+AGG | - | chr4_3:61172541-61172560 | Msa0653230:intron | 25.0% |
| ! | ACACTATTATAATTATGCAG+GGG | - | chr4_3:61172756-61172775 | Msa0653230:CDS | 25.0% |
| ! | TATAATACAAGCAAAGAGAA+AGG | - | chr4_3:61172802-61172821 | Msa0653230:CDS | 25.0% |
| ! | CATAATCAAGATTATGTGTA+TGG | - | chr4_3:61163048-61163067 | Msa0653230:CDS | 25.0% |
| ! | AAAGAAAACAAAATGCACAT+GGG | - | chr4_3:61172994-61173013 | Msa0653230:intron | 25.0% |
| !! | ATGTATTTATGTTTTCTCCA+TGG | + | chr4_3:61163115-61163134 | None:intergenic | 25.0% |
| ! | ATAAATACATGCAAGCTAAA+TGG | - | chr4_3:61173031-61173050 | Msa0653230:intron | 25.0% |
| !!! | GTTAAAGTGTTCCTTTTAAA+TGG | + | chr4_3:61173063-61173082 | None:intergenic | 25.0% |
| !! | TTTTCTTGATGATTGTGATG+TGG | - | chr4_3:61161838-61161857 | Msa0653230:three_prime_UTR | 30.0% |
| ! | TTTCTTGATGATTGTGATGT+GGG | - | chr4_3:61161839-61161858 | Msa0653230:three_prime_UTR | 30.0% |
| TCATGATAATCATATGGAGT+TGG | - | chr4_3:61161895-61161914 | Msa0653230:CDS | 30.0% | |
| TAATGAAGGTTGTAACAATG+AGG | - | chr4_3:61161955-61161974 | Msa0653230:CDS | 30.0% | |
| ! | CAACAGAACTTGTTCTATAT+AGG | + | chr4_3:61162147-61162166 | None:intergenic | 30.0% |
| GTTCTGTTGAAATAAGCATA+AGG | - | chr4_3:61162158-61162177 | Msa0653230:CDS | 30.0% | |
| ACTTGTCTCATAAAACAGTT+TGG | + | chr4_3:61162271-61162290 | None:intergenic | 30.0% | |
| ACATAAAATTACGTACCTGA+TGG | + | chr4_3:61162367-61162386 | None:intergenic | 30.0% | |
| AAAAAGATGCATGCATTTGT+AGG | + | chr4_3:61162447-61162466 | None:intergenic | 30.0% | |
| !! | TAGGAAGTGCTACAAAAAAA+AGG | + | chr4_3:61162575-61162594 | None:intergenic | 30.0% |
| AGCACTTCCTATTATTAATC+AGG | - | chr4_3:61162584-61162603 | Msa0653230:intron | 30.0% | |
| ! | ATTTAAGGTGTTATGTTGTG+TGG | - | chr4_3:61162677-61162696 | Msa0653230:intron | 30.0% |
| CATAGTACAAACAAAGAGAA+AGG | - | chr4_3:61162896-61162915 | Msa0653230:intron | 30.0% | |
| ACAAAGAGAAAGGAGATATT+AGG | - | chr4_3:61162906-61162925 | Msa0653230:intron | 30.0% | |
| CAAAGAGAAAGGAGATATTA+GGG | - | chr4_3:61162907-61162926 | Msa0653230:intron | 30.0% | |
| ! | TTTCGAGCACAATTTGAAAT+GGG | - | chr4_3:61162947-61162966 | Msa0653230:intron | 30.0% |
| ! | CTTTTCCTACATAAACTTCA+GGG | + | chr4_3:61163012-61163031 | None:intergenic | 30.0% |
| AAGGAAAACAAAATGCACAT+GGG | - | chr4_3:61163088-61163107 | Msa0653230:CDS | 30.0% | |
| ATAAATACATGCAAGCTAAG+TGG | - | chr4_3:61163125-61163144 | Msa0653230:CDS | 30.0% | |
| !! | GTTGAAGTGTTCCTTTTAAA+TGG | + | chr4_3:61163157-61163176 | None:intergenic | 30.0% |
| TCTTAAGTTCAAGGTCTTAA+AGG | - | chr4_3:61163743-61163762 | Msa0653230:intron | 30.0% | |
| GGTGTATACAATGTAAAATC+AGG | + | chr4_3:61163876-61163895 | None:intergenic | 30.0% | |
| ACATTGTATACACCTAAAGT+TGG | - | chr4_3:61163882-61163901 | Msa0653230:intron | 30.0% | |
| ! | TATACACCTAAAGTTGGTTA+AGG | - | chr4_3:61163888-61163907 | Msa0653230:intron | 30.0% |
| TTGGTTTCATAACTAACTCT+AGG | + | chr4_3:61163979-61163998 | None:intergenic | 30.0% | |
| GAGTTAGTTATGAAACCAAT+TGG | - | chr4_3:61163980-61163999 | Msa0653230:intron | 30.0% | |
| TGAAACATGTGAAACAATAG+AGG | - | chr4_3:61164040-61164059 | Msa0653230:intron | 30.0% | |
| TCAGAGTCATTCAACATAAA+CGG | - | chr4_3:61164357-61164376 | Msa0653230:intron | 30.0% | |
| AATATTCAAAAACTTCGCAG+CGG | - | chr4_3:61164449-61164468 | Msa0653230:intron | 30.0% | |
| !!! | TATTACGAGATGTTTTGATG+AGG | + | chr4_3:61164513-61164532 | None:intergenic | 30.0% |
| AAAATCATAAGCAGTACGTA+AGG | - | chr4_3:61164559-61164578 | Msa0653230:intron | 30.0% | |
| TTGAGCATAAATATACTCCT+AGG | - | chr4_3:61164988-61165007 | Msa0653230:intron | 30.0% | |
| TGAGCATAAATATACTCCTA+GGG | - | chr4_3:61164989-61165008 | Msa0653230:intron | 30.0% | |
| GAGATGTTGATCCAAATTAT+TGG | + | chr4_3:61165169-61165188 | None:intergenic | 30.0% | |
| !! | AAACGAAAACTAGTATTGAC+TGG | + | chr4_3:61165613-61165632 | None:intergenic | 30.0% |
| ! | TAGGTCACAGTGAATTTTTA+TGG | + | chr4_3:61165663-61165682 | None:intergenic | 30.0% |
| !! | AAACGAAAACTGGTATTGAT+CGG | + | chr4_3:61165806-61165825 | None:intergenic | 30.0% |
| ! | TAGGTCACAGTGAATTTTTA+TGG | + | chr4_3:61165663-61165682 | None:intergenic | 30.0% |
| GATATTGATCGGTACAAAAT+TGG | + | chr4_3:61165978-61165997 | None:intergenic | 30.0% | |
| !!! | CCGAATTTTGAAATAGAAAC+TGG | + | chr4_3:61166192-61166211 | None:intergenic | 30.0% |
| GACACAGATAAGAAAAAATC+AGG | - | chr4_3:61166212-61166231 | Msa0653230:intron | 30.0% | |
| !! | GTTATGTTGTTGTTGATTTG+TGG | + | chr4_3:61166359-61166378 | None:intergenic | 30.0% |
| ! | CAATCAATCAATCTAAGGTA+AGG | + | chr4_3:61166500-61166519 | None:intergenic | 30.0% |
| !! | ATTACGTGCAAACTGTTTTT+GGG | + | chr4_3:61166603-61166622 | None:intergenic | 30.0% |
| AGAGTCAGAGTTAGAAAATA+AGG | + | chr4_3:61166626-61166645 | None:intergenic | 30.0% | |
| ! | TTTAGAATAATGAGGCTTTG+GGG | + | chr4_3:61166699-61166718 | None:intergenic | 30.0% |
| ! | GCCCCTATTTTATTATTTAG+TGG | + | chr4_3:61166752-61166771 | None:intergenic | 30.0% |
| ! | AATAGGACGAAAGACATTTT+GGG | - | chr4_3:61167055-61167074 | Msa0653230:intron | 30.0% |
| CACTTATCTTCAATTACCAT+TGG | + | chr4_3:61167125-61167144 | None:intergenic | 30.0% | |
| AAGATAAGTGAATCTTCAAG+AGG | - | chr4_3:61167135-61167154 | Msa0653230:intron | 30.0% | |
| CTAAAAGTCCTAGTATAGTT+GGG | - | chr4_3:61167215-61167234 | Msa0653230:intron | 30.0% | |
| ACGAAACTACAAAGTTTAGT+TGG | - | chr4_3:61167302-61167321 | Msa0653230:intron | 30.0% | |
| !!! | AATTGATTGGTTTTGTCTTG+AGG | - | chr4_3:61167427-61167446 | Msa0653230:intron | 30.0% |
| AATAGTTCAAGGCATGATTA+AGG | - | chr4_3:61167450-61167469 | Msa0653230:intron | 30.0% | |
| !!! | TTGTGTTTTAGAAAAAACCG+TGG | - | chr4_3:61167559-61167578 | Msa0653230:intron | 30.0% |
| ! | TTTTGGATCGACAAAAATCA+AGG | - | chr4_3:61167608-61167627 | Msa0653230:intron | 30.0% |
| ! | GAAGATCTTTAGGAAATCAA+AGG | - | chr4_3:61167967-61167986 | Msa0653230:intron | 30.0% |
| ! | CTTTAGGAAATCAAAGGTTA+AGG | - | chr4_3:61167973-61167992 | Msa0653230:intron | 30.0% |
| ! | TAATGATTTTCACTCTTCCA+AGG | + | chr4_3:61168051-61168070 | None:intergenic | 30.0% |
| ! | TCATTAAGTGTCTTGTTCAT+TGG | - | chr4_3:61168065-61168084 | Msa0653230:intron | 30.0% |
| CAAGAAATGTTTACCTAGTT+TGG | + | chr4_3:61168241-61168260 | None:intergenic | 30.0% | |
| CAAACTAGGTAAACATTTCT+TGG | - | chr4_3:61168239-61168258 | Msa0653230:intron | 30.0% | |
| AATAGACAAGATAAAGAGAG+TGG | + | chr4_3:61168281-61168300 | None:intergenic | 30.0% | |
| ! | TCTATTATTTGGTTCGATTG+TGG | - | chr4_3:61168295-61168314 | Msa0653230:intron | 30.0% |
| !! | TTGTGGTTTTGCTTTACATT+TGG | - | chr4_3:61168312-61168331 | Msa0653230:intron | 30.0% |
| CAATGAAATTTAGATTCGTG+GGG | + | chr4_3:61168414-61168433 | None:intergenic | 30.0% | |
| ACCAATGAAGATACATTTCA+CGG | + | chr4_3:61168488-61168507 | None:intergenic | 30.0% | |
| ! | TATCTTCATTGGTTATCCAT+AGG | - | chr4_3:61168495-61168514 | Msa0653230:intron | 30.0% |
| ! | ATCTTCATTGGTTATCCATA+GGG | - | chr4_3:61168496-61168515 | Msa0653230:intron | 30.0% |
| !!! | GTCTGGTTTTTAACGTTATA+TGG | - | chr4_3:61168691-61168710 | Msa0653230:intron | 30.0% |
| AATATCTTCCTCCTTATGTT+GGG | + | chr4_3:61168763-61168782 | None:intergenic | 30.0% | |
| GAGGAAGATATTCATTCTTA+AGG | - | chr4_3:61168771-61168790 | Msa0653230:intron | 30.0% | |
| ! | TCTTAAGGCTAAATGTTTTC+AGG | - | chr4_3:61168786-61168805 | Msa0653230:intron | 30.0% |
| !! | TTGATTTTGACCACACTTAT+TGG | - | chr4_3:61168834-61168853 | Msa0653230:intron | 30.0% |
| TAATCATCTTCATTGCCTTA+AGG | - | chr4_3:61168862-61168881 | Msa0653230:intron | 30.0% | |
| ! | TCTTGTACAAGAAGACTTTT+TGG | - | chr4_3:61168978-61168997 | Msa0653230:intron | 30.0% |
| ! | CTTGTACAAGAAGACTTTTT+GGG | - | chr4_3:61168979-61168998 | Msa0653230:intron | 30.0% |
| GATTGTTCAAAAAACATACC+TGG | - | chr4_3:61169170-61169189 | Msa0653230:intron | 30.0% | |
| TGCATTATATATGCAAAGTC+CGG | + | chr4_3:61169367-61169386 | None:intergenic | 30.0% | |
| TTTACTTAGCTCAAATGGTA+AGG | + | chr4_3:61169394-61169413 | None:intergenic | 30.0% | |
| ! | AACTATGTTATTTGACCTAC+GGG | + | chr4_3:61169518-61169537 | None:intergenic | 30.0% |
| AGTTAAAAAACAAACTTCCC+TGG | - | chr4_3:61169534-61169553 | Msa0653230:intron | 30.0% | |
| TTTAATCCATGAGTCTTCTT+TGG | + | chr4_3:61169603-61169622 | None:intergenic | 30.0% | |
| ATCAAGCAATAATTGGATGA+TGG | + | chr4_3:61169850-61169869 | None:intergenic | 30.0% | |
| GAGTGTTATCAAGCAATAAT+TGG | + | chr4_3:61169857-61169876 | None:intergenic | 30.0% | |
| CTAGTCATGTGTTAATTCAA+AGG | + | chr4_3:61169922-61169941 | None:intergenic | 30.0% | |
| TGAATTAACACATGACTAGT+AGG | - | chr4_3:61169923-61169942 | Msa0653230:intron | 30.0% | |
| TCAATTAGAGTGGTAAAAGA+AGG | + | chr4_3:61170251-61170270 | None:intergenic | 30.0% | |
| TTATCCACATATACATTGGA+AGG | - | chr4_3:61170278-61170297 | Msa0653230:intron | 30.0% | |
| ATATCCTTCCAATGTATATG+TGG | + | chr4_3:61170285-61170304 | None:intergenic | 30.0% | |
| !! | ATATATTTTTATCCACCCTC+TGG | - | chr4_3:61170301-61170320 | Msa0653230:intron | 30.0% |
| TCAATTAAGGTGGTAAAAGA+AGG | + | chr4_3:61170413-61170432 | None:intergenic | 30.0% | |
| TCCGTAAGTAAACAATGATT+CGG | - | chr4_3:61170689-61170708 | Msa0653230:intron | 30.0% | |
| ACCGAATCATTGTTTACTTA+CGG | + | chr4_3:61170693-61170712 | None:intergenic | 30.0% | |
| ATAACATACATGTTACAGCA+TGG | + | chr4_3:61170996-61171015 | None:intergenic | 30.0% | |
| ! | ATTTCTTGATGATTGTGATG+TGG | - | chr4_3:61171420-61171439 | Msa0653230:intron | 30.0% |
| ! | TTTCTTGATGATTGTGATGT+GGG | - | chr4_3:61161839-61161858 | Msa0653230:three_prime_UTR | 30.0% |
| TCATGATAATCATATGGAGT+TGG | - | chr4_3:61161895-61161914 | Msa0653230:CDS | 30.0% | |
| AAGATGATGATAAATGTGAG+AGG | - | chr4_3:61171509-61171528 | Msa0653230:intron | 30.0% | |
| AGATGATGATAAATGTGAGA+GGG | - | chr4_3:61171510-61171529 | Msa0653230:intron | 30.0% | |
| GTTCTGTTGAAATAAGCATA+AGG | - | chr4_3:61162158-61162177 | Msa0653230:CDS | 30.0% | |
| !!! | CTTAGGGGTTTTTTTTGAAA+GGG | + | chr4_3:61172350-61172369 | None:intergenic | 30.0% |
| AGAAAGGTAAAAAAGCTTAG+GGG | + | chr4_3:61172365-61172384 | None:intergenic | 30.0% | |
| GAGAAAGGTAAAAAAGCTTA+GGG | + | chr4_3:61172366-61172385 | None:intergenic | 30.0% | |
| AGAGAAAGGTAAAAAAGCTT+AGG | + | chr4_3:61172367-61172386 | None:intergenic | 30.0% | |
| !! | TTTTTGGCCATGTAATTAAG+TGG | - | chr4_3:61172514-61172533 | Msa0653230:intron | 30.0% |
| ! | TTTTGGCCATGTAATTAAGT+GGG | - | chr4_3:61172515-61172534 | Msa0653230:intron | 30.0% |
| CAAAGAGAAAGGAGATATTA+GGG | - | chr4_3:61162907-61162926 | Msa0653230:intron | 30.0% | |
| GAAAGAAAACAAAATGCACA+TGG | - | chr4_3:61172993-61173012 | Msa0653230:intron | 30.0% | |
| AATGGTTAGGTCCATTTAAA+AGG | - | chr4_3:61173049-61173068 | Msa0653230:intron | 30.0% | |
| ! | ATTGTTATTATTGGTCAAGG+TGG | - | chr4_3:61173210-61173229 | Msa0653230:intron | 30.0% |
| AAGGTGGAAACTTAGTTAAT+TGG | - | chr4_3:61173226-61173245 | Msa0653230:CDS | 30.0% | |
| CAATATGCAGACACAAATCT+TGG | - | chr4_3:61161800-61161819 | Msa0653230:three_prime_UTR | 35.0% | |
| GTTGGATATTGAAGATGATG+AGG | - | chr4_3:61161913-61161932 | Msa0653230:CDS | 35.0% | |
| TCTACTGAGAGAGTTAATGA+AGG | - | chr4_3:61161941-61161960 | Msa0653230:CDS | 35.0% | |
| AAAACAGTTTGGACATGATC+TGG | + | chr4_3:61162260-61162279 | None:intergenic | 35.0% | |
| !!! | TAAAACCACCATTTTGAAGC+CGG | + | chr4_3:61162300-61162319 | None:intergenic | 35.0% |
| AGTTCACATAATCTTCCATC+AGG | - | chr4_3:61162349-61162368 | Msa0653230:intron | 35.0% | |
| GTGTTTGTTTGAAAAGCAAC+AGG | - | chr4_3:61162638-61162657 | Msa0653230:intron | 35.0% | |
| ATATGCCATTGTAACTATGC+AGG | - | chr4_3:61162848-61162867 | Msa0653230:intron | 35.0% | |
| TATGCCATTGTAACTATGCA+GGG | - | chr4_3:61162849-61162868 | Msa0653230:intron | 35.0% | |
| CTTTCGAGCACAATTTGAAA+TGG | - | chr4_3:61162946-61162965 | Msa0653230:intron | 35.0% | |
| AAACTCCCTGAAGTTTATGT+AGG | - | chr4_3:61163004-61163023 | Msa0653230:CDS | 35.0% | |
| ! | GCTTTTCCTACATAAACTTC+AGG | + | chr4_3:61163013-61163032 | None:intergenic | 35.0% |
| TTATGTGTATGGCAGCTAAA+AGG | - | chr4_3:61163059-61163078 | Msa0653230:CDS | 35.0% | |
| GAAGGAAAACAAAATGCACA+TGG | - | chr4_3:61163087-61163106 | Msa0653230:CDS | 35.0% | |
| AGTGGTTAGGTCCATTTAAA+AGG | - | chr4_3:61163143-61163162 | Msa0653230:CDS | 35.0% | |
| ATAGCAGTACAATGCATATC+AGG | + | chr4_3:61163274-61163293 | None:intergenic | 35.0% | |
| !! | TATTTCTAGTGAGAAAGGTG+TGG | - | chr4_3:61163364-61163383 | Msa0653230:intron | 35.0% |
| GAATTCAAAGCAGGTTCAAA+CGG | + | chr4_3:61163445-61163464 | None:intergenic | 35.0% | |
| CTTGAGAACAGTATAGAATG+TGG | - | chr4_3:61163554-61163573 | Msa0653230:CDS | 35.0% | |
| CTGACTTAGCAATTCAGTTA+GGG | + | chr4_3:61163936-61163955 | None:intergenic | 35.0% | |
| GATATCAACTTTGGTACTCA+TGG | + | chr4_3:61164084-61164103 | None:intergenic | 35.0% | |
| !! | GAGTACCAAAGTTGATATCT+TGG | - | chr4_3:61164085-61164104 | Msa0653230:intron | 35.0% |
| !! | CAAAGTTGATATCTTGGAGA+CGG | - | chr4_3:61164091-61164110 | Msa0653230:intron | 35.0% |
| !! | AAGTGAATGGAAGCATTGAA+GGG | - | chr4_3:61164134-61164153 | Msa0653230:intron | 35.0% |
| ! | ATACGTAAAGGGAACTTTTG+TGG | + | chr4_3:61164597-61164616 | None:intergenic | 35.0% |
| TCAATGTATGAGTATCTTGC+AGG | + | chr4_3:61164690-61164709 | None:intergenic | 35.0% | |
| AACAACATTTCCAAGCAGAA+GGG | - | chr4_3:61164709-61164728 | Msa0653230:intron | 35.0% | |
| ! | CTTTTGCTCAATAAAGACGA+GGG | + | chr4_3:61165059-61165078 | None:intergenic | 35.0% |
| TTTATTGAGCAAAAGCTCCT+AGG | - | chr4_3:61165064-61165083 | Msa0653230:intron | 35.0% | |
| TTATTGAGCAAAAGCTCCTA+GGG | - | chr4_3:61165065-61165084 | Msa0653230:intron | 35.0% | |
| GCATACTCATTTAAAGACGA+GGG | + | chr4_3:61165097-61165116 | None:intergenic | 35.0% | |
| TGCATACTCATTTAAAGACG+AGG | + | chr4_3:61165098-61165117 | None:intergenic | 35.0% | |
| CGTCTTTAAATGAGTATGCA+TGG | - | chr4_3:61165098-61165117 | Msa0653230:intron | 35.0% | |
| TTGATTAAAGCAGCATGTGT+CGG | + | chr4_3:61165202-61165221 | None:intergenic | 35.0% | |
| ! | TGTTATCTTTCTAGTGGCTT+TGG | + | chr4_3:61165545-61165564 | None:intergenic | 35.0% |
| AACTTTCATGTTTACACCCA+AGG | - | chr4_3:61165576-61165595 | Msa0653230:intron | 35.0% | |
| AAACACGAAAGTTGTAGGTA+TGG | + | chr4_3:61165762-61165781 | None:intergenic | 35.0% | |
| ! | GCACAATTTGAAACGAAAAC+TGG | + | chr4_3:61165816-61165835 | None:intergenic | 35.0% |
| !! | TCATTTTGACGTCAGACAAA+TGG | - | chr4_3:61165902-61165921 | Msa0653230:intron | 35.0% |
| AAACACGAAAGTTGTAGGTA+TGG | + | chr4_3:61165762-61165781 | None:intergenic | 35.0% | |
| !! | ATCGGTACAAAATTGGTCTT+AGG | + | chr4_3:61165971-61165990 | None:intergenic | 35.0% |
| ! | TAGGTCACAGCGAATTTTTA+TGG | + | chr4_3:61166039-61166058 | None:intergenic | 35.0% |
| !!! | TGTTAGTTTTCTAATGCCGT+TGG | + | chr4_3:61166114-61166133 | None:intergenic | 35.0% |
| AAACACGAAAGTTGTAGGTA+TGG | + | chr4_3:61165762-61165781 | None:intergenic | 35.0% | |
| ! | AATCAATCTAAGGTAAGGGT+GGG | + | chr4_3:61166495-61166514 | None:intergenic | 35.0% |
| CCTTGCAATCAATCAATCTA+AGG | + | chr4_3:61166505-61166524 | None:intergenic | 35.0% | |
| CCTTAGATTGATTGATTGCA+AGG | - | chr4_3:61166502-61166521 | Msa0653230:intron | 35.0% | |
| ATTCTACAGACTTCTCTTCT+AGG | - | chr4_3:61166525-61166544 | Msa0653230:intron | 35.0% | |
| !!! | AAACTGTTTTTGGGAGAAAG+AGG | + | chr4_3:61166594-61166613 | None:intergenic | 35.0% |
| ! | GATTACGTGCAAACTGTTTT+TGG | + | chr4_3:61166604-61166623 | None:intergenic | 35.0% |
| !! | TCATAATGGATGTACGTGTT+TGG | - | chr4_3:61166893-61166912 | Msa0653230:intron | 35.0% |
| TTTCCATAGTCGTACCATTA+CGG | + | chr4_3:61166994-61167013 | None:intergenic | 35.0% | |
| ! | CAATAGGACGAAAGACATTT+TGG | - | chr4_3:61167054-61167073 | Msa0653230:intron | 35.0% |
| GGATTACTTGAAAAGACCAA+TGG | - | chr4_3:61167106-61167125 | Msa0653230:intron | 35.0% | |
| TAAGTGAATCTTCAAGAGGA+TGG | - | chr4_3:61167139-61167158 | Msa0653230:intron | 35.0% | |
| ATGAGGAGTTGAAGATGTTA+TGG | - | chr4_3:61167173-61167192 | Msa0653230:intron | 35.0% | |
| GATGTTATGGTGTAAACTTG+TGG | - | chr4_3:61167186-61167205 | Msa0653230:intron | 35.0% | |
| ! | CCAACTATACTAGGACTTTT+AGG | + | chr4_3:61167217-61167236 | None:intergenic | 35.0% |
| CCTAAAAGTCCTAGTATAGT+TGG | - | chr4_3:61167214-61167233 | Msa0653230:intron | 35.0% | |
| !! | AGACATTCTGAAGTTTGAAG+AGG | - | chr4_3:61167262-61167281 | Msa0653230:intron | 35.0% |
| ! | TCTGAAGTTTGAAGAGGTAA+AGG | - | chr4_3:61167268-61167287 | Msa0653230:intron | 35.0% |
| ACAAAGTTTAGTTGGATGCA+AGG | - | chr4_3:61167310-61167329 | Msa0653230:intron | 35.0% | |
| GCAAGGTGAAAAATAAGACT+TGG | - | chr4_3:61167327-61167346 | Msa0653230:intron | 35.0% | |
| AAATAAGACTTGGAAGCTTG+TGG | - | chr4_3:61167337-61167356 | Msa0653230:intron | 35.0% | |
| AATAAGACTTGGAAGCTTGT+GGG | - | chr4_3:61167338-61167357 | Msa0653230:intron | 35.0% | |
| AGCGAGAATTTCGAATTGAT+TGG | - | chr4_3:61167414-61167433 | Msa0653230:intron | 35.0% | |
| TTGTCTTGAGGAATAGTTCA+AGG | - | chr4_3:61167439-61167458 | Msa0653230:intron | 35.0% | |
| ! | CAAAAATCAAGGCACGATTT+TGG | - | chr4_3:61167619-61167638 | Msa0653230:intron | 35.0% |
| GTGAATCTCATGGAAATCAA+AGG | - | chr4_3:61167739-61167758 | Msa0653230:intron | 35.0% | |
| AATCTCATGGAAATCAAAGG+AGG | - | chr4_3:61167742-61167761 | Msa0653230:intron | 35.0% | |
| ATCTCATGGAAATCAAAGGA+GGG | - | chr4_3:61167743-61167762 | Msa0653230:intron | 35.0% | |
| ! | ATCAAAGGAGGGAACTTTTA+AGG | - | chr4_3:61167754-61167773 | Msa0653230:intron | 35.0% |
| AAGCTTCAAGATGTGAATCT+TGG | - | chr4_3:61167817-61167836 | Msa0653230:intron | 35.0% | |
| AATCTTGGAGAACCTAAAAG+AGG | - | chr4_3:61167832-61167851 | Msa0653230:intron | 35.0% | |
| ATCTTGGAGAACCTAAAAGA+GGG | - | chr4_3:61167833-61167852 | Msa0653230:intron | 35.0% | |
| AGAGTCTTTGTAAGCAACTT+TGG | - | chr4_3:61167921-61167940 | Msa0653230:intron | 35.0% | |
| !!! | TTAAGGGTTGGTTCTCTTTT+GGG | - | chr4_3:61167990-61168009 | Msa0653230:intron | 35.0% |
| !! | TTCTAGAGTTGGGAAACAAT+TGG | - | chr4_3:61168019-61168038 | Msa0653230:intron | 35.0% |
| ! | TCTAGAGTTGGGAAACAATT+GGG | - | chr4_3:61168020-61168039 | Msa0653230:intron | 35.0% |
| !! | ATTGTCGTTGTTGTTGTTTG+TGG | - | chr4_3:61168354-61168373 | Msa0653230:intron | 35.0% |
| GTTACCGAATTCACAACAAT+TGG | - | chr4_3:61168448-61168467 | Msa0653230:intron | 35.0% | |
| TTTGCACTTCATTCTCATAC+AGG | + | chr4_3:61168605-61168624 | None:intergenic | 35.0% | |
| !! | ACACTCTAGAACTAGAAACA+AGG | - | chr4_3:61168632-61168651 | Msa0653230:intron | 35.0% |
| !! | CACTCTAGAACTAGAAACAA+GGG | - | chr4_3:61168633-61168652 | Msa0653230:intron | 35.0% |
| TTATATGGATTTCTGTCGTG+TGG | - | chr4_3:61168706-61168725 | Msa0653230:intron | 35.0% | |
| ! | TTTCTGTCGTGTGGATTATT+TGG | - | chr4_3:61168715-61168734 | Msa0653230:intron | 35.0% |
| TAGACACATATCCCAACATA+AGG | - | chr4_3:61168749-61168768 | Msa0653230:intron | 35.0% | |
| GAATATCTTCCTCCTTATGT+TGG | + | chr4_3:61168764-61168783 | None:intergenic | 35.0% | |
| !! | TAAGGCTAAATGTTTTCAGG+TGG | - | chr4_3:61168789-61168808 | Msa0653230:intron | 35.0% |
| !! | ATTTTGACCACACTTATTGG+AGG | - | chr4_3:61168837-61168856 | Msa0653230:intron | 35.0% |
| GATTAAACCTCCAATAAGTG+TGG | + | chr4_3:61168847-61168866 | None:intergenic | 35.0% | |
| ACATATGATCACTAGCACAA+GGG | + | chr4_3:61168903-61168922 | None:intergenic | 35.0% | |
| AACATATGATCACTAGCACA+AGG | + | chr4_3:61168904-61168923 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTTTTAGTGGTGGC+CGG | - | chr4_3:61169331-61169350 | Msa0653230:intron | 35.0% |
| CATTATATATGCAAAGTCCG+GGG | + | chr4_3:61169365-61169384 | None:intergenic | 35.0% | |
| GCATTATATATGCAAAGTCC+GGG | + | chr4_3:61169366-61169385 | None:intergenic | 35.0% | |
| TCACGTTTACTTAGCTCAAA+TGG | + | chr4_3:61169399-61169418 | None:intergenic | 35.0% | |
| AACCAGACATGACAAAAACA+AGG | - | chr4_3:61169709-61169728 | Msa0653230:intron | 35.0% | |
| ACCAGACATGACAAAAACAA+GGG | - | chr4_3:61169710-61169729 | Msa0653230:intron | 35.0% | |
| ! | TTGGATTCTTTTGTAAGACG+CGG | - | chr4_3:61169790-61169809 | Msa0653230:intron | 35.0% |
| ATTAACACATGACTAGTAGG+CGG | - | chr4_3:61169926-61169945 | Msa0653230:intron | 35.0% | |
| ! | GTTTTCCAATGTTGCAATGT+TGG | - | chr4_3:61170449-61170468 | Msa0653230:intron | 35.0% |
| TTGTTCCAACATTGCAACAT+TGG | + | chr4_3:61170457-61170476 | None:intergenic | 35.0% | |
| ! | TTTGAGATGAATAAACTGCC+AGG | - | chr4_3:61170746-61170765 | Msa0653230:intron | 35.0% |
| !! | TAGTCTTATCCCGTTCAAAT+CGG | + | chr4_3:61170880-61170899 | None:intergenic | 35.0% |
| AACGGGATAAGACTAAAAGA+AGG | - | chr4_3:61170885-61170904 | Msa0653230:intron | 35.0% | |
| !! | AATATCCAAGTGGATTAGCA+TGG | - | chr4_3:61170927-61170946 | Msa0653230:intron | 35.0% |
| ! | TGCACATGTAAGAGTGATTT+TGG | + | chr4_3:61171162-61171181 | None:intergenic | 35.0% |
| AAATCACTCTTACATGTGCA+CGG | - | chr4_3:61171162-61171181 | Msa0653230:intron | 35.0% | |
| AAATGTGAGAGGGTTAATGA+AGG | - | chr4_3:61171520-61171539 | Msa0653230:intron | 35.0% | |
| TGATTTCCCACTTGAACATA+GGG | - | chr4_3:61171791-61171810 | Msa0653230:CDS | 35.0% | |
| ! | AGAACTTGTTCTGTATAGGT+TGG | + | chr4_3:61171893-61171912 | None:intergenic | 35.0% |
| ! | CAACAGAACTTGTTCTGTAT+AGG | + | chr4_3:61171897-61171916 | None:intergenic | 35.0% |
| !!! | TAAAACCAGCATTTTGAAGC+TGG | + | chr4_3:61172050-61172069 | None:intergenic | 35.0% |
| !!! | GCTTAGGGGTTTTTTTTGAA+AGG | + | chr4_3:61172351-61172370 | None:intergenic | 35.0% |
| AATGATAGGACTACAGAGAA+AGG | + | chr4_3:61172381-61172400 | None:intergenic | 35.0% | |
| CTGTAGTCCTATCATTAATC+AGG | - | chr4_3:61172385-61172404 | Msa0653230:intron | 35.0% | |
| TTGGAACCCACTTAATTACA+TGG | + | chr4_3:61172524-61172543 | None:intergenic | 35.0% | |
| GCAAAGAGAAAGGAGATATT+AGG | - | chr4_3:61172812-61172831 | Msa0653230:CDS | 35.0% | |
| ! | TTTCGAGCACAATTTGAGAT+GGG | - | chr4_3:61172853-61172872 | Msa0653230:CDS | 35.0% |
| TACATGCAAGCTAAATGGTT+AGG | - | chr4_3:61173036-61173055 | Msa0653230:intron | 35.0% | |
| TTTCATTGGGATATTCTGAG+AGG | - | chr4_3:61163185-61163204 | Msa0653230:intron | 35.0% | |
| TTAACAGCAGTATGCACATT+AGG | + | chr4_3:61173180-61173199 | None:intergenic | 35.0% | |
| AATGGGGTGTAATTAAGGAA+AGG | + | chr4_3:61173333-61173352 | None:intergenic | 35.0% | |
| ! | GTTTTCGTAGGGAATTGTCT+AGG | - | chr4_3:61161765-61161784 | Msa0653230:three_prime_UTR | 40.0% |
| ! | GATGATTGTGATGTGGGTTT+TGG | - | chr4_3:61161845-61161864 | Msa0653230:three_prime_UTR | 40.0% |
| TTACCTGCAAAAGCTGAAGT+TGG | + | chr4_3:61162003-61162022 | None:intergenic | 40.0% | |
| TGCAACGAAAGAAGCAATTG+AGG | - | chr4_3:61162183-61162202 | Msa0653230:CDS | 40.0% | |
| TGTAGTTGTAGTAGACAGAG+CGG | - | chr4_3:61162229-61162248 | Msa0653230:CDS | 40.0% | |
| TTATGAGACAAGTCTCTAGC+CGG | - | chr4_3:61162278-61162297 | Msa0653230:CDS | 40.0% | |
| ATGCCATTGTAACTATGCAG+GGG | - | chr4_3:61162850-61162869 | Msa0653230:intron | 40.0% | |
| ! | TGCAGGGGAACATACATTTT+TGG | - | chr4_3:61162865-61162884 | Msa0653230:intron | 40.0% |
| TGAAATGGGAAAAGCAAGTG+AGG | - | chr4_3:61162961-61162980 | Msa0653230:intron | 40.0% | |
| TACATGCAAGCTAAGTGGTT+AGG | - | chr4_3:61163130-61163149 | Msa0653230:CDS | 40.0% | |
| TAATCCAAAGCAGAAGCCAA+AGG | - | chr4_3:61163213-61163232 | Msa0653230:intron | 40.0% | |
| ACAGTTAACATCGATGCCTT+TGG | + | chr4_3:61163232-61163251 | None:intergenic | 40.0% | |
| !! | AAAGGCATCGATGTTAACTG+TGG | - | chr4_3:61163231-61163250 | Msa0653230:intron | 40.0% |
| TGATCTTGGGAATTCAAAGC+AGG | + | chr4_3:61163454-61163473 | None:intergenic | 40.0% | |
| !! | GTGGTATTGACTTGAGACAT+AGG | + | chr4_3:61163706-61163725 | None:intergenic | 40.0% |
| GTTCAAGGTCTTAAAGGTCA+TGG | - | chr4_3:61163749-61163768 | Msa0653230:intron | 40.0% | |
| AGGTCATGGACATTGAAACA+AGG | - | chr4_3:61163763-61163782 | Msa0653230:intron | 40.0% | |
| CTCTCACCTTAACCAACTTT+AGG | + | chr4_3:61163897-61163916 | None:intergenic | 40.0% | |
| CAATTCAGTTAGGGTGATGA+TGG | + | chr4_3:61163927-61163946 | None:intergenic | 40.0% | |
| ! | GCTGACTTAGCAATTCAGTT+AGG | + | chr4_3:61163937-61163956 | None:intergenic | 40.0% |
| ACTGAATTGCTAAGTCAGCA+TGG | - | chr4_3:61163938-61163957 | Msa0653230:intron | 40.0% | |
| ! | AAACCAATTGGCTTCCACTA+TGG | - | chr4_3:61163992-61164011 | Msa0653230:intron | 40.0% |
| ! | AACCAATTGGCTTCCACTAT+GGG | - | chr4_3:61163993-61164012 | Msa0653230:intron | 40.0% |
| CGTCTCCAAGATATCAACTT+TGG | + | chr4_3:61164093-61164112 | None:intergenic | 40.0% | |
| CATGGTTCAATGGAAGTGAA+TGG | - | chr4_3:61164121-61164140 | Msa0653230:intron | 40.0% | |
| !! | GAAGTGAATGGAAGCATTGA+AGG | - | chr4_3:61164133-61164152 | Msa0653230:intron | 40.0% |
| ATACGCATGATCAACCTTAG+AGG | - | chr4_3:61164268-61164287 | Msa0653230:intron | 40.0% | |
| TAGGTGCTCTGATACGTAAA+GGG | + | chr4_3:61164608-61164627 | None:intergenic | 40.0% | |
| TTAGGTGCTCTGATACGTAA+AGG | + | chr4_3:61164609-61164628 | None:intergenic | 40.0% | |
| CTATCTCTCACTGTGTCTTT+AGG | + | chr4_3:61164627-61164646 | None:intergenic | 40.0% | |
| GCAGGTGATCGAGAATAAAT+AGG | + | chr4_3:61164672-61164691 | None:intergenic | 40.0% | |
| GAACAACATTTCCAAGCAGA+AGG | - | chr4_3:61164708-61164727 | Msa0653230:intron | 40.0% | |
| ACAACATTTCCAAGCAGAAG+GGG | - | chr4_3:61164710-61164729 | Msa0653230:intron | 40.0% | |
| ATGCATGCAGTACCATTCTA+GGG | - | chr4_3:61164947-61164966 | Msa0653230:intron | 40.0% | |
| TTTATGCTCAAAAGCGACGA+GGG | + | chr4_3:61164979-61164998 | None:intergenic | 40.0% | |
| ATTTATGCTCAAAAGCGACG+AGG | + | chr4_3:61164980-61164999 | None:intergenic | 40.0% | |
| CTATTGAGCAAAAGCTCCTA+GGG | - | chr4_3:61165027-61165046 | Msa0653230:intron | 40.0% | |
| ! | GCTTTTGCTCAATAAAGACG+AGG | + | chr4_3:61165060-61165079 | None:intergenic | 40.0% |
| ATGGTCAAATTACTGCACGT+AGG | + | chr4_3:61165682-61165701 | None:intergenic | 40.0% | |
| GGTGTAAACACGAAAGTTGT+AGG | + | chr4_3:61165767-61165786 | None:intergenic | 40.0% | |
| !! | GGTATTGATCGGTACAGAAT+TGG | + | chr4_3:61165795-61165814 | None:intergenic | 40.0% |
| ATGGTCAAATTACTGCACGT+AGG | + | chr4_3:61165682-61165701 | None:intergenic | 40.0% | |
| GGTGTAAACACGAAAGTTGT+AGG | + | chr4_3:61165767-61165786 | None:intergenic | 40.0% | |
| ATGGTCAAATTACTGCACGT+AGG | + | chr4_3:61165682-61165701 | None:intergenic | 40.0% | |
| !! | TCATTTTGACGTCAGACCAA+CGG | - | chr4_3:61165719-61165738 | Msa0653230:intron | 40.0% |
| GGTGTAAACACGAAAGTTGT+AGG | + | chr4_3:61165767-61165786 | None:intergenic | 40.0% | |
| !! | ATCGGTACAGAATTGGTCTT+AGG | + | chr4_3:61166164-61166183 | None:intergenic | 40.0% |
| !! | GGTATTGATCGGTACAGAAT+TGG | + | chr4_3:61165795-61165814 | None:intergenic | 40.0% |
| ! | CAATCAATCTAAGGTAAGGG+TGG | + | chr4_3:61166496-61166515 | None:intergenic | 40.0% |
| AGAGGAGAAACCTAGAGAAA+GGG | + | chr4_3:61166576-61166595 | None:intergenic | 40.0% | |
| AAGAGGAGAAACCTAGAGAA+AGG | + | chr4_3:61166577-61166596 | None:intergenic | 40.0% | |
| ! | ATAGGGCGTTACAGTCATAA+TGG | - | chr4_3:61166879-61166898 | Msa0653230:intron | 40.0% |
| ATGTACGTGTTTGGAAGTTG+AGG | - | chr4_3:61166902-61166921 | Msa0653230:intron | 40.0% | |
| TCTTCTCTTAGTCTCACTAG+TGG | + | chr4_3:61166958-61166977 | None:intergenic | 40.0% | |
| ! | ACAAGTTGAAGACACCGTAA+TGG | - | chr4_3:61166977-61166996 | Msa0653230:intron | 40.0% |
| TATGCTCTAGTTGTGAGCAA+GGG | - | chr4_3:61167024-61167043 | Msa0653230:intron | 40.0% | |
| GAGCAAGGGAATTCTTCAAT+AGG | - | chr4_3:61167038-61167057 | Msa0653230:intron | 40.0% | |
| GAATGTATGACACGTCTTCT+AGG | - | chr4_3:61167085-61167104 | Msa0653230:intron | 40.0% | |
| ! | GGATGGATTTGATCACTATG+AGG | - | chr4_3:61167156-61167175 | Msa0653230:intron | 40.0% |
| TCTTTGCACCCAACTATACT+AGG | + | chr4_3:61167226-61167245 | None:intergenic | 40.0% | |
| TGCAAAGATCTTCAAGAGGA+CGG | - | chr4_3:61167238-61167257 | Msa0653230:intron | 40.0% | |
| GTGTACGAACTGGAAAATTG+TGG | - | chr4_3:61167660-61167679 | Msa0653230:intron | 40.0% | |
| ACCAAGCTTACTCAACAGAT+GGG | + | chr4_3:61167721-61167740 | None:intergenic | 40.0% | |
| ! | AGTAAGCTTGGTGAATCTCA+TGG | - | chr4_3:61167729-61167748 | Msa0653230:intron | 40.0% |
| TACTAAAGGTTGAGGGTCTT+TGG | - | chr4_3:61167785-61167804 | Msa0653230:intron | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | - | chr4_3:61167786-61167805 | Msa0653230:intron | 40.0% | |
| TCTTGGAGAACCTAAAAGAG+GGG | - | chr4_3:61167834-61167853 | Msa0653230:intron | 40.0% | |
| CTCATGAATCTCTCTCGAAA+AGG | + | chr4_3:61167881-61167900 | None:intergenic | 40.0% | |
| !! | CTTTTCGAGAGAGATTCATG+AGG | - | chr4_3:61167879-61167898 | Msa0653230:intron | 40.0% |
| TAAGCAACTTTGGTGAGTCT+TGG | - | chr4_3:61167931-61167950 | Msa0653230:intron | 40.0% | |
| AAGCAACTTTGGTGAGTCTT+GGG | - | chr4_3:61167932-61167951 | Msa0653230:intron | 40.0% | |
| GGAAATCAAAGGTTAAGGGT+TGG | - | chr4_3:61167978-61167997 | Msa0653230:intron | 40.0% | |
| !!! | GTTAAGGGTTGGTTCTCTTT+TGG | - | chr4_3:61167989-61168008 | Msa0653230:intron | 40.0% |
| !!! | TAAGGGTTGGTTCTCTTTTG+GGG | - | chr4_3:61167991-61168010 | Msa0653230:intron | 40.0% |
| !! | TTGGGGTTAGATTCTAGAGT+TGG | - | chr4_3:61168008-61168027 | Msa0653230:intron | 40.0% |
| !! | TGGGGTTAGATTCTAGAGTT+GGG | - | chr4_3:61168009-61168028 | Msa0653230:intron | 40.0% |
| GAAACAATTGGGAAACACCT+TGG | - | chr4_3:61168031-61168050 | Msa0653230:intron | 40.0% | |
| TCCAACAATGACCTACTATG+GGG | + | chr4_3:61168218-61168237 | None:intergenic | 40.0% | |
| GTCCAACAATGACCTACTAT+GGG | + | chr4_3:61168219-61168238 | None:intergenic | 40.0% | |
| GGCTCCAATTGTTGTGAATT+CGG | + | chr4_3:61168455-61168474 | None:intergenic | 40.0% | |
| ! | ACAACAATTGGAGCCTTATG+TGG | - | chr4_3:61168460-61168479 | Msa0653230:intron | 40.0% |
| ! | CAACAATTGGAGCCTTATGT+GGG | - | chr4_3:61168461-61168480 | Msa0653230:intron | 40.0% |
| ! | AACAATTGGAGCCTTATGTG+GGG | - | chr4_3:61168462-61168481 | Msa0653230:intron | 40.0% |
| GCCGTGAAATGTATCTTCAT+TGG | - | chr4_3:61168484-61168503 | Msa0653230:intron | 40.0% | |
| AGGATGTGGAAATTGGAATC+TGG | - | chr4_3:61168532-61168551 | Msa0653230:intron | 40.0% | |
| ATGTGGAAATTGGAATCTGG+TGG | - | chr4_3:61168535-61168554 | Msa0653230:intron | 40.0% | |
| AGAACTAGAAACAAGGGTAG+AGG | - | chr4_3:61168639-61168658 | Msa0653230:intron | 40.0% | |
| AACAAGGGTAGAGGAAGTTT+AGG | - | chr4_3:61168648-61168667 | Msa0653230:intron | 40.0% | |
| ACACATATCCCAACATAAGG+AGG | - | chr4_3:61168752-61168771 | Msa0653230:intron | 40.0% | |
| !!! | CTTTTTTTTTAGTGGTGGCC+GGG | - | chr4_3:61169332-61169351 | Msa0653230:intron | 40.0% |
| !! | AGTTGTTTTATTGGACCCGT+AGG | - | chr4_3:61169500-61169519 | Msa0653230:intron | 40.0% |
| CATGAATCATGAAGTAGCCA+GGG | + | chr4_3:61169554-61169573 | None:intergenic | 40.0% | |
| TCATGAATCATGAAGTAGCC+AGG | + | chr4_3:61169555-61169574 | None:intergenic | 40.0% | |
| AAACCACCAAAGAAGACTCA+TGG | - | chr4_3:61169594-61169613 | Msa0653230:intron | 40.0% | |
| AATCCATGAGTCTTCTTTGG+TGG | + | chr4_3:61169600-61169619 | None:intergenic | 40.0% | |
| !!! | TCCCTTGTTTTTGTCATGTC+TGG | + | chr4_3:61169714-61169733 | None:intergenic | 40.0% |
| TTAGTTGGACAACTTGACGA+TGG | + | chr4_3:61169820-61169839 | None:intergenic | 40.0% | |
| GTAAAAGAAGGTTGCAACGT+TGG | + | chr4_3:61170239-61170258 | None:intergenic | 40.0% | |
| ! | ATTTTTATCCACCCTCTGGA+AGG | - | chr4_3:61170305-61170324 | Msa0653230:intron | 40.0% |
| ATATATATCCTTCCAGAGGG+TGG | + | chr4_3:61170316-61170335 | None:intergenic | 40.0% | |
| GTAAAAGAAGGTTGCAACGT+TGG | + | chr4_3:61170239-61170258 | None:intergenic | 40.0% | |
| AAACGCTCATTCTTTGTACC+TGG | + | chr4_3:61170767-61170786 | None:intergenic | 40.0% | |
| CTAAAAGAAGGTTGCAACGT+TGG | - | chr4_3:61170897-61170916 | Msa0653230:intron | 40.0% | |
| ! | TGGTTCTGCAAATATCCAAG+TGG | - | chr4_3:61170917-61170936 | Msa0653230:intron | 40.0% |
| CAAAACCATGCTAATCCACT+TGG | + | chr4_3:61170935-61170954 | None:intergenic | 40.0% | |
| !!! | CAAGTGGATTAGCATGGTTT+TGG | - | chr4_3:61170933-61170952 | Msa0653230:intron | 40.0% |
| !!! | TGGATTAGCATGGTTTTGGT+TGG | - | chr4_3:61170937-61170956 | Msa0653230:intron | 40.0% |
| TAATAGCACACCAAATGACG+TGG | - | chr4_3:61170968-61170987 | Msa0653230:intron | 40.0% | |
| !! | AGTGATTTTGGCACAACATG+TGG | + | chr4_3:61171150-61171169 | None:intergenic | 40.0% |
| CTAATGTTGTGTGTTGTGTG+TGG | + | chr4_3:61171267-61171286 | None:intergenic | 40.0% | |
| AGGCAAATACCTAGTAACAC+GGG | + | chr4_3:61171323-61171342 | None:intergenic | 40.0% | |
| CAGGCAAATACCTAGTAACA+CGG | + | chr4_3:61171324-61171343 | None:intergenic | 40.0% | |
| GTTACTAGGTATTTGCCTGT+TGG | - | chr4_3:61171325-61171344 | Msa0653230:intron | 40.0% | |
| !!! | ATTTGCCTGTTGGTTTTCGT+AGG | - | chr4_3:61171335-61171354 | Msa0653230:intron | 40.0% |
| !!! | TTTGCCTGTTGGTTTTCGTA+GGG | - | chr4_3:61171336-61171355 | Msa0653230:intron | 40.0% |
| AATTCCCTACGAAAACCAAC+AGG | + | chr4_3:61171343-61171362 | None:intergenic | 40.0% | |
| ! | GTTTTCGTAGGGAATTGTCT+AGG | - | chr4_3:61161765-61161784 | Msa0653230:three_prime_UTR | 40.0% |
| CAATATGCAGACACAAGTCT+TGG | - | chr4_3:61171382-61171401 | Msa0653230:intron | 40.0% | |
| GATGATTGTGATGTGGGTTT+AGG | - | chr4_3:61161845-61161864 | Msa0653230:three_prime_UTR | 40.0% | |
| GATCAATTACCTGCAAAAGC+TGG | + | chr4_3:61171588-61171607 | None:intergenic | 40.0% | |
| GTGATTTCCCACTTGAACAT+AGG | - | chr4_3:61171790-61171809 | Msa0653230:CDS | 40.0% | |
| TTACGACCCTATGTTCAAGT+GGG | + | chr4_3:61171800-61171819 | None:intergenic | 40.0% | |
| ATTACGACCCTATGTTCAAG+TGG | + | chr4_3:61171801-61171820 | None:intergenic | 40.0% | |
| AAATTGGAGTGCATTTGCAG+TGG | - | chr4_3:61171970-61171989 | Msa0653230:CDS | 40.0% | |
| AAAACAATGTCGACATGAGC+TGG | + | chr4_3:61172010-61172029 | None:intergenic | 40.0% | |
| ! | TTAAGTGGGTTCCAATCAAG+AGG | - | chr4_3:61172529-61172548 | Msa0653230:intron | 40.0% |
| CTTTCGAGCACAATTTGAGA+TGG | - | chr4_3:61172852-61172871 | Msa0653230:CDS | 40.0% | |
| AAGACTATAACCGTCTTGTG+AGG | - | chr4_3:61172887-61172906 | Msa0653230:CDS | 40.0% | |
| AAACTGCCTGAGGTTTATGT+AGG | - | chr4_3:61172910-61172929 | Msa0653230:CDS | 40.0% | |
| ! | GCTTTTCCTACATAAACCTC+AGG | + | chr4_3:61172919-61172938 | None:intergenic | 40.0% |
| ACGGTTAACATTGATGCCTT+TGG | + | chr4_3:61173138-61173157 | None:intergenic | 40.0% | |
| CGAAATTAAAGGAGGCAATG+GGG | + | chr4_3:61173349-61173368 | None:intergenic | 40.0% | |
| CCGAAATTAAAGGAGGCAAT+GGG | + | chr4_3:61173350-61173369 | None:intergenic | 40.0% | |
| ! | CCCATTGCCTCCTTTAATTT+CGG | - | chr4_3:61173347-61173366 | Msa0653230:CDS | 40.0% |
| !!! | ATTTGCCAGCTGGTTTTCGT+AGG | - | chr4_3:61161753-61161772 | Msa0653230:three_prime_UTR | 45.0% |
| !!! | TTTGCCAGCTGGTTTTCGTA+GGG | - | chr4_3:61161754-61161773 | Msa0653230:three_prime_UTR | 45.0% |
| AATTCCCTACGAAAACCAGC+TGG | + | chr4_3:61161761-61161780 | None:intergenic | 45.0% | |
| ! | CAACCAACTTCAGCTTTTGC+AGG | - | chr4_3:61161997-61162016 | Msa0653230:CDS | 45.0% |
| GTTCCCCTGCATAGTTACAA+TGG | + | chr4_3:61162856-61162875 | None:intergenic | 45.0% | |
| AGGACTATAACCGTCTTGTG+AGG | - | chr4_3:61162981-61163000 | Msa0653230:CDS | 45.0% | |
| !! | GGCAGCTAAAAGGTGTTTGA+AGG | - | chr4_3:61163069-61163088 | Msa0653230:CDS | 45.0% |
| ACAAAATGCACATGGGACCA+TGG | - | chr4_3:61163095-61163114 | Msa0653230:CDS | 45.0% | |
| GTCTCAGGTTCAATTCTCTC+CGG | + | chr4_3:61163663-61163682 | None:intergenic | 45.0% | |
| GAATTGAACCTGAGACCTTG+AGG | - | chr4_3:61163667-61163686 | Msa0653230:CDS | 45.0% | |
| ATTCTTCCCTTGTCCCATAG+TGG | + | chr4_3:61164009-61164028 | None:intergenic | 45.0% | |
| !! | AATGGAAGCATTGAAGGGTG+AGG | - | chr4_3:61164139-61164158 | Msa0653230:intron | 45.0% |
| CTAGCACGTTTAGGTCATGA+CGG | - | chr4_3:61164179-61164198 | Msa0653230:intron | 45.0% | |
| AGGTCATGACGGTGATGTAA+TGG | - | chr4_3:61164190-61164209 | Msa0653230:intron | 45.0% | |
| TCATGACGGTGATGTAATGG+AGG | - | chr4_3:61164193-61164212 | Msa0653230:intron | 45.0% | |
| GTGTTCCCAAAGGTCAAGTT+TGG | - | chr4_3:61164224-61164243 | Msa0653230:intron | 45.0% | |
| CCTGACCAAACTTGACCTTT+GGG | + | chr4_3:61164232-61164251 | None:intergenic | 45.0% | |
| TCCTGACCAAACTTGACCTT+TGG | + | chr4_3:61164233-61164252 | None:intergenic | 45.0% | |
| CATGCATGCAGTACCATTCT+AGG | - | chr4_3:61164946-61164965 | Msa0653230:intron | 45.0% | |
| TGCATGCAGTACCATTCTAG+GGG | - | chr4_3:61164948-61164967 | Msa0653230:intron | 45.0% | |
| ! | CTTTTGCTCAATAGCGACGA+GGG | + | chr4_3:61165021-61165040 | None:intergenic | 45.0% |
| GCTATTGAGCAAAAGCTCCT+AGG | - | chr4_3:61165026-61165045 | Msa0653230:intron | 45.0% | |
| !! | CTAGTGGCTTTGGTTTGACA+TGG | + | chr4_3:61165535-61165554 | None:intergenic | 45.0% |
| ACTGGTACAGAATTCGCCTT+GGG | + | chr4_3:61165595-61165614 | None:intergenic | 45.0% | |
| ! | ATCGGTACAGAATTGGTCTC+AGG | + | chr4_3:61165788-61165807 | None:intergenic | 45.0% |
| TAGGTTTCTCCCCTTTCTCT+AGG | - | chr4_3:61166544-61166563 | Msa0653230:intron | 45.0% | |
| AGGGGAGAAACCTAGAGAAA+GGG | + | chr4_3:61166557-61166576 | None:intergenic | 45.0% | |
| AAGGGGAGAAACCTAGAGAA+AGG | + | chr4_3:61166558-61166577 | None:intergenic | 45.0% | |
| TAGGTTTCTCCCCTTTCTCT+AGG | - | chr4_3:61166544-61166563 | Msa0653230:intron | 45.0% | |
| GAGGAGAAACCTAGAGAAAG+GGG | + | chr4_3:61166575-61166594 | None:intergenic | 45.0% | |
| TGAGGTAGAGAAAACTCAGC+TGG | - | chr4_3:61166920-61166939 | Msa0653230:intron | 45.0% | |
| ACACCGTAATGGTACGACTA+TGG | - | chr4_3:61166988-61167007 | Msa0653230:intron | 45.0% | |
| CAACTAGAGCATAGCACTCA+TGG | + | chr4_3:61167017-61167036 | None:intergenic | 45.0% | |
| CTATGCTCTAGTTGTGAGCA+AGG | - | chr4_3:61167023-61167042 | Msa0653230:intron | 45.0% | |
| TGGGTGCAAAGATCTTCAAG+AGG | - | chr4_3:61167234-61167253 | Msa0653230:intron | 45.0% | |
| GGCATGATTAAGGAGCAAGT+TGG | - | chr4_3:61167460-61167479 | Msa0653230:intron | 45.0% | |
| GAAAAAACCGTGGCACGATA+TGG | - | chr4_3:61167569-61167588 | Msa0653230:intron | 45.0% | |
| GATTTCTCCATATCGTGCCA+CGG | + | chr4_3:61167579-61167598 | None:intergenic | 45.0% | |
| ! | GAGAAATCGTGGCACAGTTT+TGG | - | chr4_3:61167591-61167610 | Msa0653230:intron | 45.0% |
| CAGTTGTACTGTGTACGAAC+TGG | - | chr4_3:61167650-61167669 | Msa0653230:intron | 45.0% | |
| ACCCATCTGTTGAGTAAGCT+TGG | - | chr4_3:61167717-61167736 | Msa0653230:intron | 45.0% | |
| CACCAAGCTTACTCAACAGA+TGG | + | chr4_3:61167722-61167741 | None:intergenic | 45.0% | |
| CTTGGAGAACCTAAAAGAGG+GGG | - | chr4_3:61167835-61167854 | Msa0653230:intron | 45.0% | |
| ACCTAAAAGAGGGGGTTCTT+AGG | - | chr4_3:61167843-61167862 | Msa0653230:intron | 45.0% | |
| ! | TCCTAAGAACCCCCTCTTTT+AGG | + | chr4_3:61167847-61167866 | None:intergenic | 45.0% |
| TCGAGAGAGATTCATGAGGT+TGG | - | chr4_3:61167883-61167902 | Msa0653230:intron | 45.0% | |
| CGAGAGAGATTCATGAGGTT+GGG | - | chr4_3:61167884-61167903 | Msa0653230:intron | 45.0% | |
| ATCAATCCATCCCCCATAGT+AGG | - | chr4_3:61168204-61168223 | Msa0653230:intron | 45.0% | |
| CCAACAATGACCTACTATGG+GGG | + | chr4_3:61168217-61168236 | None:intergenic | 45.0% | |
| GGTCCAACAATGACCTACTA+TGG | + | chr4_3:61168220-61168239 | None:intergenic | 45.0% | |
| GGTCATTGTTGGACCAAACT+AGG | - | chr4_3:61168225-61168244 | Msa0653230:intron | 45.0% | |
| TGGTTATCCATAGGGTGTGA+AGG | - | chr4_3:61168504-61168523 | Msa0653230:intron | 45.0% | |
| GGTTATCCATAGGGTGTGAA+GGG | - | chr4_3:61168505-61168524 | Msa0653230:intron | 45.0% | |
| GGGTTACAGGATGTGGAAAT+TGG | - | chr4_3:61168525-61168544 | Msa0653230:intron | 45.0% | |
| TGGAAATTGGAATCTGGTGG+AGG | - | chr4_3:61168538-61168557 | Msa0653230:intron | 45.0% | |
| TACCTGGTCCAAGAACTAAG+CGG | - | chr4_3:61169186-61169205 | Msa0653230:intron | 45.0% | |
| ! | AATTTGGGCCGCTTAGTTCT+TGG | + | chr4_3:61169197-61169216 | None:intergenic | 45.0% |
| TTATCCCGTTCAAATCGGTG+GGG | + | chr4_3:61170875-61170894 | None:intergenic | 45.0% | |
| CTTATCCCGTTCAAATCGGT+GGG | + | chr4_3:61170876-61170895 | None:intergenic | 45.0% | |
| TCTTATCCCGTTCAAATCGG+TGG | + | chr4_3:61170877-61170896 | None:intergenic | 45.0% | |
| TGGCACAACATGTGGTGATA+GGG | + | chr4_3:61171142-61171161 | None:intergenic | 45.0% | |
| TTGGCACAACATGTGGTGAT+AGG | + | chr4_3:61171143-61171162 | None:intergenic | 45.0% | |
| TTACCTGCAAAAGCTGGAGT+TGG | + | chr4_3:61171582-61171601 | None:intergenic | 45.0% | |
| TCTAGCCAGCTTCAAAATGC+TGG | - | chr4_3:61172042-61172061 | Msa0653230:CDS | 45.0% | |
| !! | TGCAGGGGAGCATACATTTT+TGG | - | chr4_3:61172771-61172790 | Msa0653230:CDS | 45.0% |
| ACAAAATGCACATGGGACCA+TGG | - | chr4_3:61163095-61163114 | Msa0653230:CDS | 45.0% | |
| TAGTCCAAAGCAGAAGCCAA+AGG | - | chr4_3:61173119-61173138 | Msa0653230:intron | 45.0% | |
| GAGGCAATGGGGTGTAATTA+AGG | + | chr4_3:61173338-61173357 | None:intergenic | 45.0% | |
| GCCGAAATTAAAGGAGGCAA+TGG | + | chr4_3:61173351-61173370 | None:intergenic | 45.0% | |
| !! | TTTCTAAATTAAAAAATTTA+AGG | - | chr4_3:61162662-61162681 | Msa0653230:intron | 5.0% |
| !! | ACATATTAATTAAATTATAA+CGG | - | chr4_3:61166817-61166836 | Msa0653230:intron | 5.0% |
| !! | AATAAATAAGTAATAAAAAT+AGG | - | chr4_3:61166861-61166880 | Msa0653230:intron | 5.0% |
| !! | ATAAATAAGTAATAAAAATA+GGG | - | chr4_3:61166862-61166881 | Msa0653230:intron | 5.0% |
| !!! | ATGAAAAAAATAAATTTTTT+TGG | - | chr4_3:61171551-61171570 | Msa0653230:intron | 5.0% |
| !!! | TGAAAAAAATAAATTTTTTT+GGG | - | chr4_3:61171552-61171571 | Msa0653230:intron | 5.0% |
| CCTAGTCACTCGTGCTAAAG+AGG | + | chr4_3:61161732-61161751 | None:intergenic | 50.0% | |
| CCTCTTTAGCACGAGTGACT+AGG | - | chr4_3:61161729-61161748 | Msa0653230:three_prime_UTR | 50.0% | |
| GTGACTAGGTATTTGCCAGC+TGG | - | chr4_3:61161743-61161762 | Msa0653230:three_prime_UTR | 50.0% | |
| ! | GTCTCTAGCCGGCTTCAAAA+TGG | - | chr4_3:61162289-61162308 | Msa0653230:CDS | 50.0% |
| ! | TCTAGCCGGCTTCAAAATGG+TGG | - | chr4_3:61162292-61162311 | Msa0653230:CDS | 50.0% |
| CAGGGAGTTTCCTCACAAGA+CGG | + | chr4_3:61162994-61163013 | None:intergenic | 50.0% | |
| ! | GATGCCTTTGGCTTCTGCTT+TGG | + | chr4_3:61163220-61163239 | None:intergenic | 50.0% |
| ! | GTCCCATAGTGGAAGCCAAT+TGG | + | chr4_3:61163998-61164017 | None:intergenic | 50.0% |
| TTGGCTTCCACTATGGGACA+AGG | - | chr4_3:61163999-61164018 | Msa0653230:intron | 50.0% | |
| TGGCTTCCACTATGGGACAA+GGG | - | chr4_3:61164000-61164019 | Msa0653230:intron | 50.0% | |
| CGGAAGCAAGCATGGTTCAA+TGG | - | chr4_3:61164111-61164130 | Msa0653230:intron | 50.0% | |
| CGTCATGACCTAAACGTGCT+AGG | + | chr4_3:61164181-61164200 | None:intergenic | 50.0% | |
| GGTGATGTGTGTGTTCCCAA+AGG | - | chr4_3:61164214-61164233 | Msa0653230:intron | 50.0% | |
| CCCAAAGGTCAAGTTTGGTC+AGG | - | chr4_3:61164229-61164248 | Msa0653230:intron | 50.0% | |
| AGGTCAAGTTTGGTCAGGAG+AGG | - | chr4_3:61164234-61164253 | Msa0653230:intron | 50.0% | |
| CGCATGATCAACCTTAGAGG+TGG | - | chr4_3:61164271-61164290 | Msa0653230:intron | 50.0% | |
| CCTTTGTCACTCCACCTCTA+AGG | + | chr4_3:61164285-61164304 | None:intergenic | 50.0% | |
| CCTTAGAGGTGGAGTGACAA+AGG | - | chr4_3:61164282-61164301 | Msa0653230:intron | 50.0% | |
| !! | GTGTTGATTGCTGTCGTGAG+TGG | + | chr4_3:61164650-61164669 | None:intergenic | 50.0% |
| TGAATCTCACCCCTTCTGCT+TGG | + | chr4_3:61164722-61164741 | None:intergenic | 50.0% | |
| ! | GCTTTTGCTCAATAGCGACG+AGG | + | chr4_3:61165022-61165041 | None:intergenic | 50.0% |
| GACTGGTACAGAATTCGCCT+TGG | + | chr4_3:61165596-61165615 | None:intergenic | 50.0% | |
| GGGGAGAAACCTAGAGAAAG+GGG | + | chr4_3:61166556-61166575 | None:intergenic | 50.0% | |
| !! | ATGAGGCTTTGGGGCAGAAT+TGG | + | chr4_3:61166690-61166709 | None:intergenic | 50.0% |
| GGTAGAGAAAACTCAGCTGG+AGG | - | chr4_3:61166923-61166942 | Msa0653230:intron | 50.0% | |
| AGAGAAAACTCAGCTGGAGG+TGG | - | chr4_3:61166926-61166945 | Msa0653230:intron | 50.0% | |
| GGTGGTTGGATGCAAGTGAA+AGG | - | chr4_3:61167370-61167389 | Msa0653230:intron | 50.0% | |
| TGCAAGTGAAAGGCAGTGTG+TGG | - | chr4_3:61167380-61167399 | Msa0653230:intron | 50.0% | |
| GGCACGATATGGAGAAATCG+TGG | - | chr4_3:61167580-61167599 | Msa0653230:intron | 50.0% | |
| AAAGGTTGAGGGTCTTTGGG+TGG | - | chr4_3:61167789-61167808 | Msa0653230:intron | 50.0% | |
| AAGGTTGAGGGTCTTTGGGT+GGG | - | chr4_3:61167790-61167809 | Msa0653230:intron | 50.0% | |
| AAAGAGGGGGTTCTTAGGAG+AGG | - | chr4_3:61167848-61167867 | Msa0653230:intron | 50.0% | |
| AAGAGGGGGTTCTTAGGAGA+GGG | - | chr4_3:61167849-61167868 | Msa0653230:intron | 50.0% | |
| CAATGACCTACTATGGGGGA+TGG | + | chr4_3:61168213-61168232 | None:intergenic | 50.0% | |
| CCCCCATAGTAGGTCATTGT+TGG | - | chr4_3:61168214-61168233 | Msa0653230:intron | 50.0% | |
| ACATTTCACGGCCCCACATA+AGG | + | chr4_3:61168476-61168495 | None:intergenic | 50.0% | |
| CTGTAACCCTTCACACCCTA+TGG | + | chr4_3:61168514-61168533 | None:intergenic | 50.0% | |
| CATAGGGTGTGAAGGGTTAC+AGG | - | chr4_3:61168512-61168531 | Msa0653230:intron | 50.0% | |
| GTGTGAAGGGTTACAGGATG+TGG | - | chr4_3:61168518-61168537 | Msa0653230:intron | 50.0% | |
| CTTCTCAAAACACGCACGTC+TGG | - | chr4_3:61168674-61168693 | Msa0653230:intron | 50.0% | |
| AAAGTCCGGGGTTCAAATCC+CGG | + | chr4_3:61169353-61169372 | None:intergenic | 50.0% | |
| !! | CTTAGCCCCACCGATTTGAA+CGG | - | chr4_3:61170867-61170886 | Msa0653230:intron | 50.0% |
| !! | TTAGCCCCACCGATTTGAAC+GGG | - | chr4_3:61170868-61170887 | Msa0653230:intron | 50.0% |
| CAGCATGGATCCACGTCATT+TGG | + | chr4_3:61170981-61171000 | None:intergenic | 50.0% | |
| ATGTGGTGATAGGGCCCAAT+TGG | + | chr4_3:61171133-61171152 | None:intergenic | 50.0% | |
| CCTAGTAACACGGGACATAG+AGG | + | chr4_3:61171314-61171333 | None:intergenic | 50.0% | |
| ! | CCTCTATGTCCCGTGTTACT+AGG | - | chr4_3:61171311-61171330 | Msa0653230:intron | 50.0% |
| ! | CAACCAACTCCAGCTTTTGC+AGG | - | chr4_3:61171576-61171595 | Msa0653230:intron | 50.0% |
| TGCATTTGCAGTGGACAGAG+TGG | - | chr4_3:61171979-61171998 | Msa0653230:CDS | 50.0% | |
| CAGGCAGTTTCCTCACAAGA+CGG | + | chr4_3:61172900-61172919 | None:intergenic | 50.0% | |
| TCTTGTGAGGAAACTGCCTG+AGG | - | chr4_3:61172900-61172919 | Msa0653230:CDS | 50.0% | |
| ! | GATGCCTTTGGCTTCTGCTT+TGG | + | chr4_3:61163220-61163239 | None:intergenic | 50.0% |
| GAACCTGAGACCTTGAGGAG+AGG | - | chr4_3:61163672-61163691 | Msa0653230:CDS | 55.0% | |
| GGAGTATGCTCCTCTCCTCA+AGG | + | chr4_3:61163685-61163704 | None:intergenic | 55.0% | |
| CTTGGAGACGGAAGCAAGCA+TGG | - | chr4_3:61164103-61164122 | Msa0653230:intron | 55.0% | |
| !! | GGAAGCATTGAAGGGTGAGG+AGG | - | chr4_3:61164142-61164161 | Msa0653230:intron | 55.0% |
| GAAGGGTGAGGAGGTGATGA+CGG | - | chr4_3:61164151-61164170 | Msa0653230:intron | 55.0% | |
| AAGGGTGAGGAGGTGATGAC+GGG | - | chr4_3:61164152-61164171 | Msa0653230:intron | 55.0% | |
| ACGGGCAACCTAGCACGTTT+AGG | - | chr4_3:61164170-61164189 | Msa0653230:intron | 55.0% | |
| AGTTTGGTCAGGAGAGGCAG+AGG | - | chr4_3:61164240-61164259 | Msa0653230:intron | 55.0% | |
| CGAGGGCTTATCCCCTAGAA+TGG | + | chr4_3:61164962-61164981 | None:intergenic | 55.0% | |
| GAAGCTTGTGGGACTACCGA+GGG | - | chr4_3:61167349-61167368 | Msa0653230:intron | 55.0% | |
| CACTTGCATCCAACCACCCT+CGG | + | chr4_3:61167368-61167387 | None:intergenic | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+GGG | - | chr4_3:61167791-61167810 | Msa0653230:intron | 55.0% | |
| GCTCCTCTCCTCAAGGTCTC+AGG | + | chr4_3:61163678-61163697 | None:intergenic | 60.0% | |
| AAGACGAGGGCTCATGCCCT+AGG | + | chr4_3:61165046-61165065 | None:intergenic | 60.0% | |
| AAGACGAGGGCTCATGCCCT+AGG | + | chr4_3:61165046-61165065 | None:intergenic | 60.0% | |
| GGAAGCTTGTGGGACTACCG+AGG | - | chr4_3:61167348-61167367 | Msa0653230:intron | 60.0% | |
| GGGGGTTCTTAGGAGAGGGT+TGG | - | chr4_3:61167853-61167872 | Msa0653230:intron | 60.0% | |
| ! | GGCCGCTTAGTTCTTGGACC+AGG | + | chr4_3:61169191-61169210 | None:intergenic | 60.0% |
| GCTTGTGGGACTACCGAGGG+TGG | - | chr4_3:61167352-61167371 | Msa0653230:intron | 65.0% | |
| GTGGGACTACCGAGGGTGGT+TGG | - | chr4_3:61167356-61167375 | Msa0653230:intron | 65.0% | |
| GGTGGCCGGGATTTGAACCC+CGG | - | chr4_3:61169345-61169364 | Msa0653230:intron | 65.0% | |
| GCGACGAGGGCTCATGCCCT+AGG | + | chr4_3:61165008-61165027 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 61161719 | 61173373 | 61161719 | ID=Msa0653230;Name=Msa0653230 |
| chr4_3 | mRNA | 61161719 | 61173373 | 61161719 | ID=Msa0653230-mRNA-1;Parent=Msa0653230;Name=Msa0653230-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.44|0.3|1|0.55|0.5|10|164|595 |
| chr4_3 | exon | 61161719 | 61162316 | 61161719 | ID=Msa0653230-mRNA-1:exon:16706;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61162972 | 61163203 | 61162972 | ID=Msa0653230-mRNA-1:exon:16705;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61163495 | 61163735 | 61163495 | ID=Msa0653230-mRNA-1:exon:16704;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61171705 | 61171711 | 61171705 | ID=Msa0653230-mRNA-1:exon:16703;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61171743 | 61171753 | 61171743 | ID=Msa0653230-mRNA-1:exon:16702;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61171790 | 61172011 | 61171790 | ID=Msa0653230-mRNA-1:exon:16701;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61172030 | 61172222 | 61172030 | ID=Msa0653230-mRNA-1:exon:16700;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61172722 | 61172953 | 61172722 | ID=Msa0653230-mRNA-1:exon:16699;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61173074 | 61173129 | 61173074 | ID=Msa0653230-mRNA-1:exon:16698;Parent=Msa0653230-mRNA-1 |
| chr4_3 | exon | 61173214 | 61173373 | 61173214 | ID=Msa0653230-mRNA-1:exon:16697;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61173214 | 61173373 | 61173214 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61173074 | 61173129 | 61173074 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61172722 | 61172953 | 61172722 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61172030 | 61172222 | 61172030 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61171790 | 61172011 | 61171790 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61171743 | 61171753 | 61171743 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61171705 | 61171711 | 61171705 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61163495 | 61163735 | 61163495 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61162972 | 61163203 | 61162972 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | CDS | 61161883 | 61162316 | 61161883 | ID=Msa0653230-mRNA-1:cds;Parent=Msa0653230-mRNA-1 |
| chr4_3 | three_prime_UTR | 61161719 | 61161882 | 61161719 | ID=Msa0653230-mRNA-1:three_prime_utr;Parent=Msa0653230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
