Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656940 | XP_013446625.1 | 97.409 | 193 | 5 | 0 | 1 | 193 | 1 | 193 | 2.50e-138 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656940 | sp|Q9SDN0|DNJ20_ARATH | 50.505 | 198 | 85 | 5 | 1 | 190 | 1 | 193 | 1.57e-58 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102240 | Msa0656940 | -0.809688 | 1.672431e-50 | -8.615850e-47 |
| Msa0656940 | Msa0700620 | 0.960058 | 3.950718e-118 | -8.615850e-47 |
| Msa0656940 | Msa1143370 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa0656940 | Msa1445910 | 0.827827 | 1.261551e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656940 | MtrunA17_Chr8g0378161 | 97.409 | 193 | 5 | 0 | 1 | 193 | 1 | 193 | 2.30e-142 | 394 |
| Msa0656940 | MtrunA17_Chr4g0050581 | 32.143 | 168 | 96 | 6 | 24 | 189 | 22 | 173 | 1.24e-17 | 76.6 |
| Msa0656940 | MtrunA17_Chr5g0405521 | 48.485 | 66 | 34 | 0 | 62 | 127 | 74 | 139 | 6.22e-15 | 69.3 |
| Msa0656940 | MtrunA17_Chr5g0405501 | 45.714 | 70 | 38 | 0 | 60 | 129 | 71 | 140 | 2.11e-14 | 67.8 |
| Msa0656940 | MtrunA17_Chr5g0405491 | 44.928 | 69 | 38 | 0 | 61 | 129 | 72 | 140 | 3.52e-14 | 67.0 |
| Msa0656940 | MtrunA17_Chr8g0371891 | 42.857 | 70 | 40 | 0 | 60 | 129 | 47 | 116 | 1.14e-13 | 65.1 |
| Msa0656940 | MtrunA17_Chr2g0333221 | 35.644 | 101 | 54 | 2 | 39 | 131 | 41 | 138 | 7.57e-13 | 66.2 |
| Msa0656940 | MtrunA17_Chr3g0103131 | 47.692 | 65 | 34 | 0 | 60 | 124 | 59 | 123 | 7.65e-13 | 63.5 |
| Msa0656940 | MtrunA17_Chr7g0271891 | 46.970 | 66 | 33 | 1 | 61 | 124 | 17 | 82 | 1.07e-12 | 63.2 |
| Msa0656940 | MtrunA17_Chr7g0269841 | 42.466 | 73 | 40 | 1 | 59 | 131 | 25 | 95 | 4.05e-12 | 63.9 |
| Msa0656940 | MtrunA17_Chr8g0344721 | 44.118 | 68 | 34 | 1 | 61 | 124 | 11 | 78 | 4.57e-12 | 62.8 |
| Msa0656940 | MtrunA17_Chr2g0328581 | 44.444 | 63 | 32 | 1 | 62 | 124 | 77 | 136 | 1.58e-11 | 60.8 |
| Msa0656940 | MtrunA17_Chr5g0426951 | 42.466 | 73 | 40 | 1 | 58 | 130 | 81 | 151 | 1.70e-11 | 62.4 |
| Msa0656940 | MtrunA17_Chr3g0138471 | 40.845 | 71 | 41 | 1 | 61 | 131 | 5 | 74 | 2.25e-11 | 61.6 |
| Msa0656940 | MtrunA17_Chr3g0123861 | 38.889 | 72 | 41 | 1 | 54 | 125 | 76 | 144 | 2.35e-11 | 61.6 |
| Msa0656940 | MtrunA17_Chr6g0478651 | 36.066 | 122 | 65 | 5 | 19 | 132 | 21 | 137 | 2.46e-11 | 61.6 |
| Msa0656940 | MtrunA17_Chr7g0253281 | 45.455 | 66 | 33 | 1 | 62 | 127 | 56 | 118 | 3.68e-11 | 60.8 |
| Msa0656940 | MtrunA17_Chr1g0206121 | 30.328 | 122 | 76 | 2 | 20 | 141 | 1 | 113 | 9.45e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656940 | AT4G13830.2 | 50.505 | 198 | 85 | 5 | 1 | 190 | 1 | 193 | 1.59e-59 | 185 |
| Msa0656940 | AT4G13830.1 | 58.015 | 131 | 48 | 3 | 23 | 147 | 23 | 152 | 9.76e-43 | 140 |
| Msa0656940 | AT4G13830.3 | 57.252 | 131 | 49 | 3 | 23 | 147 | 23 | 152 | 2.22e-42 | 140 |
| Msa0656940 | AT4G36040.1 | 47.887 | 71 | 36 | 1 | 60 | 129 | 65 | 135 | 1.55e-14 | 68.6 |
| Msa0656940 | AT1G56300.2 | 46.269 | 67 | 34 | 1 | 60 | 124 | 13 | 79 | 1.39e-13 | 64.7 |
| Msa0656940 | AT3G13310.1 | 37.624 | 101 | 52 | 3 | 29 | 127 | 35 | 126 | 1.72e-13 | 65.5 |
| Msa0656940 | AT1G56300.1 | 46.269 | 67 | 34 | 1 | 60 | 124 | 13 | 79 | 2.41e-13 | 65.1 |
| Msa0656940 | AT2G17880.1 | 45.455 | 66 | 36 | 0 | 60 | 125 | 68 | 133 | 2.16e-12 | 62.8 |
| Msa0656940 | AT4G39960.1 | 40.000 | 80 | 45 | 1 | 55 | 134 | 80 | 156 | 5.07e-12 | 63.9 |
| Msa0656940 | AT4G39960.2 | 40.000 | 80 | 45 | 1 | 55 | 134 | 80 | 156 | 5.07e-12 | 63.9 |
| Msa0656940 | AT3G62600.1 | 41.096 | 73 | 41 | 1 | 59 | 131 | 25 | 95 | 1.09e-11 | 62.8 |
| Msa0656940 | AT2G22360.1 | 40.541 | 74 | 41 | 1 | 61 | 134 | 87 | 157 | 1.42e-11 | 62.8 |
| Msa0656940 | AT3G17830.1 | 35.537 | 121 | 69 | 5 | 20 | 137 | 23 | 137 | 2.02e-11 | 62.4 |
| Msa0656940 | AT3G14200.1 | 43.939 | 66 | 36 | 1 | 60 | 124 | 12 | 77 | 2.16e-11 | 61.2 |
| Msa0656940 | AT5G25530.2 | 40.845 | 71 | 41 | 1 | 61 | 131 | 5 | 74 | 2.67e-11 | 61.6 |
| Msa0656940 | AT1G80030.2 | 38.462 | 78 | 45 | 1 | 54 | 131 | 69 | 143 | 4.08e-11 | 61.6 |
| Msa0656940 | AT1G80030.3 | 38.462 | 78 | 45 | 1 | 54 | 131 | 69 | 143 | 4.08e-11 | 61.6 |
| Msa0656940 | AT1G80030.1 | 38.462 | 78 | 45 | 1 | 54 | 131 | 69 | 143 | 4.08e-11 | 61.6 |
| Msa0656940 | AT1G59980.1 | 46.970 | 66 | 33 | 1 | 59 | 124 | 22 | 85 | 4.09e-11 | 61.6 |
| Msa0656940 | AT1G80030.4 | 38.462 | 78 | 45 | 1 | 54 | 131 | 69 | 143 | 4.40e-11 | 61.2 |
| Msa0656940 | AT1G59980.2 | 46.970 | 66 | 33 | 1 | 59 | 124 | 22 | 85 | 4.42e-11 | 61.2 |
| Msa0656940 | AT1G59725.1 | 40.000 | 65 | 39 | 0 | 61 | 125 | 5 | 69 | 8.34e-11 | 60.5 |
| Msa0656940 | AT2G35720.1 | 33.000 | 100 | 66 | 1 | 59 | 157 | 14 | 113 | 8.99e-11 | 60.5 |
Find 80 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGGAGCTTCTACGATCTTC+TGG | 0.253540 | 4_3:+66295357 | Msa0656940:CDS |
| TGCTATCACTTCTTCTCTTC+AGG | 0.257402 | 4_3:-66298481 | None:intergenic |
| TATAATAAAATTAAACAAAA+TGG | 0.282522 | 4_3:-66298760 | None:intergenic |
| TTCTAAACAAGTAAACTATA+TGG | 0.291258 | 4_3:-66298698 | None:intergenic |
| TCCATCAATGAACCGGATTC+TGG | 0.328084 | 4_3:-66295385 | None:intergenic |
| GTATACCAAGAGGTTTATTC+AGG | 0.341476 | 4_3:+66295480 | Msa0656940:CDS |
| TTGAAGGTGGCTTTAAGCTT+TGG | 0.356103 | 4_3:-66295313 | None:intergenic |
| CTGTTCAATTGTATGATTCA+AGG | 0.368756 | 4_3:-66295113 | None:intergenic |
| TGAAGGTGGCTTTAAGCTTT+GGG | 0.376965 | 4_3:-66295312 | None:intergenic |
| GGATGACCCGAATGAGATTC+GGG | 0.401935 | 4_3:-66295287 | None:intergenic |
| CCCATGACCCGAATCTCATT+CGG | 0.404157 | 4_3:+66295280 | Msa0656940:CDS |
| ACCAGAATCCGGTTCATTGA+TGG | 0.409355 | 4_3:+66295384 | Msa0656940:CDS |
| CGCCACAACGCCGTCGTTGA+AGG | 0.409679 | 4_3:-66295329 | None:intergenic |
| AGGATGACCCGAATGAGATT+CGG | 0.411788 | 4_3:-66295288 | None:intergenic |
| TCGGGTCATGGGTATGGTGG+TGG | 0.415955 | 4_3:-66295269 | None:intergenic |
| TTTGATATCCATCAATGAAC+CGG | 0.418110 | 4_3:-66295392 | None:intergenic |
| ATGAAGCGATAATCGCTTCC+GGG | 0.421198 | 4_3:-66295208 | None:intergenic |
| ATGCTATAATCATTCTGATC+AGG | 0.431312 | 4_3:+66295600 | Msa0656940:CDS |
| AAACTTTGTCTGATCCTTCA+AGG | 0.443921 | 4_3:+66295518 | Msa0656940:CDS |
| GAGAGAGAGATGCGTTGTTA+CGG | 0.451601 | 4_3:+66295175 | Msa0656940:exon |
| GATGAAGCGATAATCGCTTC+CGG | 0.453064 | 4_3:-66295209 | None:intergenic |
| GGATGTTTCACCACCGGATC+GGG | 0.463368 | 4_3:+66295450 | Msa0656940:CDS |
| CCCGAATGAGATTCGGGTCA+TGG | 0.464892 | 4_3:-66295281 | None:intergenic |
| CTCGAATACGCCAGCAGAGG+GGG | 0.466457 | 4_3:+66298540 | Msa0656940:CDS |
| TTATTAGGTGAGTGAACAAA+AGG | 0.466965 | 4_3:+66298421 | Msa0656940:intron |
| CCATGACCCGAATCTCATTC+GGG | 0.467417 | 4_3:+66295281 | Msa0656940:CDS |
| TCATACATAATCCTCCTTGA+AGG | 0.468151 | 4_3:-66295532 | None:intergenic |
| CGGAGCTTCTACGATCTTCT+GGG | 0.475758 | 4_3:+66295358 | Msa0656940:CDS |
| CAAGAGGTTTATTCAGGTGC+AGG | 0.475899 | 4_3:+66295486 | Msa0656940:CDS |
| TGAGTGAACAAAAGGATGAA+TGG | 0.478243 | 4_3:+66298429 | Msa0656940:CDS |
| CGGGTCATGGGTATGGTGGT+GGG | 0.482731 | 4_3:-66295268 | None:intergenic |
| CAACGACGGCGTTGTGGCGG+AGG | 0.487062 | 4_3:+66295333 | Msa0656940:CDS |
| GATTATGTATGATAGAGATA+TGG | 0.488939 | 4_3:+66295543 | Msa0656940:CDS |
| AGTGAAGGAGGAGGTAGTGT+TGG | 0.495639 | 4_3:-66295235 | None:intergenic |
| TGAGATTCGGGTCATGGGTA+TGG | 0.497946 | 4_3:-66295275 | None:intergenic |
| GGGTATGGTGGTGGGTCGGA+AGG | 0.500342 | 4_3:-66295260 | None:intergenic |
| CGATCCGGTGGTGAAACATC+CGG | 0.500626 | 4_3:-66295448 | None:intergenic |
| GGCTCGAATACGCCAGCAGA+GGG | 0.500705 | 4_3:+66298538 | Msa0656940:CDS |
| GTATACTCTTCCACCCGATC+CGG | 0.515930 | 4_3:-66295463 | None:intergenic |
| TCGAATACGCCAGCAGAGGG+GGG | 0.524687 | 4_3:+66298541 | Msa0656940:CDS |
| GATCCGGTGGTGAAACATCC+GGG | 0.526103 | 4_3:-66295447 | None:intergenic |
| CCGAATGAGATTCGGGTCAT+GGG | 0.531452 | 4_3:-66295280 | None:intergenic |
| AAGAAGTGATAGCAAGGTCA+TGG | 0.532505 | 4_3:+66298490 | Msa0656940:CDS |
| CTTCTGGGCATACCAGAATC+CGG | 0.533025 | 4_3:+66295373 | Msa0656940:CDS |
| CGAATACGCCAGCAGAGGGG+GGG | 0.536867 | 4_3:+66298542 | Msa0656940:CDS |
| CGGATGTTTCACCACCGGAT+CGG | 0.539387 | 4_3:+66295449 | Msa0656940:CDS |
| CTTAAAGCCACCTTCAACGA+CGG | 0.544649 | 4_3:+66295319 | Msa0656940:CDS |
| CGGAAGGACAGTGAAGGAGG+AGG | 0.549643 | 4_3:-66295244 | None:intergenic |
| CTGCACCTGAATAAACCTCT+TGG | 0.549933 | 4_3:-66295485 | None:intergenic |
| TCATGGGTATGGTGGTGGGT+CGG | 0.552227 | 4_3:-66295264 | None:intergenic |
| CGGCTCGAATACGCCAGCAG+AGG | 0.554435 | 4_3:+66298537 | Msa0656940:CDS |
| CACCTTCAACGACGGCGTTG+TGG | 0.564399 | 4_3:+66295327 | Msa0656940:CDS |
| GGTGGCTTTAAGCTTTGGGA+AGG | 0.570592 | 4_3:-66295308 | None:intergenic |
| ACGGCGTTGTGGCGGAGGAA+CGG | 0.572751 | 4_3:+66295338 | Msa0656940:CDS |
| TGCTGCTGATAATACGTCAT+GGG | 0.573906 | 4_3:+66298514 | Msa0656940:CDS |
| CACAACGCCGTCGTTGAAGG+TGG | 0.575442 | 4_3:-66295326 | None:intergenic |
| CTTCAACGACGGCGTTGTGG+CGG | 0.582226 | 4_3:+66295330 | Msa0656940:CDS |
| TTTATTATAATCACTCCACT+TGG | 0.582304 | 4_3:+66298774 | Msa0656940:three_prime_UTR |
| GGTCGGAAGGACAGTGAAGG+AGG | 0.583185 | 4_3:-66295247 | None:intergenic |
| TGTTACGGCTTAACAATCCC+CGG | 0.585898 | 4_3:+66295190 | Msa0656940:CDS |
| TACTCTTCCACCCGATCCGG+TGG | 0.594060 | 4_3:-66295460 | None:intergenic |
| AGGATGAATGGAAATCTCGT+TGG | 0.596088 | 4_3:+66298441 | Msa0656940:CDS |
| GAAGAGAAGAAGTGATAGCA+AGG | 0.602140 | 4_3:+66298484 | Msa0656940:CDS |
| GAGGTTTATTCAGGTGCAGG+AGG | 0.604858 | 4_3:+66295489 | Msa0656940:CDS |
| TGTTTCACCACCGGATCGGG+TGG | 0.605740 | 4_3:+66295453 | Msa0656940:CDS |
| ATGATAGAGATATGGCTAGA+GGG | 0.609573 | 4_3:+66295551 | Msa0656940:CDS |
| CGTTGGCAATCTCAACTCGA+TGG | 0.610624 | 4_3:+66298458 | Msa0656940:CDS |
| GTGGGTCGGAAGGACAGTGA+AGG | 0.611080 | 4_3:-66295250 | None:intergenic |
| GATTCGGGTCATGGGTATGG+TGG | 0.612358 | 4_3:-66295272 | None:intergenic |
| GCTCGAATACGCCAGCAGAG+GGG | 0.614172 | 4_3:+66298539 | Msa0656940:CDS |
| TATGATAGAGATATGGCTAG+AGG | 0.622164 | 4_3:+66295550 | Msa0656940:CDS |
| CCCCAGAAAACAAAACCAAG+TGG | 0.632711 | 4_3:-66298789 | None:intergenic |
| TCACCCGGATGTTTCACCAC+CGG | 0.635031 | 4_3:+66295444 | Msa0656940:CDS |
| TGCTGATAATACGTCATGGG+CGG | 0.647620 | 4_3:+66298517 | Msa0656940:CDS |
| CTTTGTCTGATCCTTCAAGG+AGG | 0.657466 | 4_3:+66295521 | Msa0656940:CDS |
| ATGCTGCTGATAATACGTCA+TGG | 0.662327 | 4_3:+66298513 | Msa0656940:CDS |
| TGAAGCGATAATCGCTTCCG+GGG | 0.671244 | 4_3:-66295207 | None:intergenic |
| ATTATACACATAGAGAACAA+AGG | 0.681965 | 4_3:-66298582 | None:intergenic |
| ACTTGCAAGAAAGTATCACC+CGG | 0.704249 | 4_3:+66295429 | Msa0656940:CDS |
| GGGTGGAAGAGTATACCAAG+AGG | 0.760271 | 4_3:+66295470 | Msa0656940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAATATAAGAAAAAA+TGG | - | chr4_3:66295646-66295665 | None:intergenic | 10.0% |
| !! | GTTATTAATTATTATTTGTT+AGG | + | chr4_3:66296262-66296281 | Msa0656940:intron | 10.0% |
| !! | GAATATATTATAAATTGTTT+CGG | - | chr4_3:66297526-66297545 | None:intergenic | 10.0% |
| !! | AGAAAAAATATAATTGATTA+TGG | - | chr4_3:66297662-66297681 | None:intergenic | 10.0% |
| !!! | TAATCAATTATATTTTTTCT+TGG | + | chr4_3:66297662-66297681 | Msa0656940:intron | 10.0% |
| !!! | ATTTTTATTTTTCATTGAAT+AGG | + | chr4_3:66298327-66298346 | Msa0656940:intron | 10.0% |
| !!! | TTGATTTTTTTTTCTTCTTA+TGG | + | chr4_3:66295670-66295689 | Msa0656940:intron | 15.0% |
| !!! | TGATTTTTTTTTCTTCTTAT+GGG | + | chr4_3:66295671-66295690 | Msa0656940:intron | 15.0% |
| !!! | TTTATGTTGATTTTTTGTTT+TGG | + | chr4_3:66295742-66295761 | Msa0656940:intron | 15.0% |
| !!! | ATTTGATTTATACATACTAT+CGG | - | chr4_3:66295907-66295926 | None:intergenic | 15.0% |
| !! | CTTATAATGAAATAAAAAAC+AGG | + | chr4_3:66297545-66297564 | Msa0656940:intron | 15.0% |
| !! | AAATATAATTGATTATGGAA+GGG | - | chr4_3:66297657-66297676 | None:intergenic | 15.0% |
| !! | AAAATATAATTGATTATGGA+AGG | - | chr4_3:66297658-66297677 | None:intergenic | 15.0% |
| !! | GATTGTTAAGAAATTTAAAA+TGG | + | chr4_3:66297944-66297963 | Msa0656940:intron | 15.0% |
| !!! | GACAACTTTTTAATAATAAT+TGG | + | chr4_3:66298005-66298024 | Msa0656940:intron | 15.0% |
| !! | CTTGTTTAGAAAAAAAAAAA+TGG | + | chr4_3:66298710-66298729 | Msa0656940:three_prime_UTR | 15.0% |
| !!! | GATTTTTTTTTCTTCTTATG+GGG | + | chr4_3:66295672-66295691 | Msa0656940:intron | 20.0% |
| !!! | GTTTATGTTTGTTATTGTTA+TGG | + | chr4_3:66295804-66295823 | Msa0656940:intron | 20.0% |
| !! | TGTTAAAGAGTTAATTGATA+TGG | + | chr4_3:66295832-66295851 | Msa0656940:intron | 20.0% |
| !!! | TTTTTGAACTGATATATGAT+TGG | + | chr4_3:66295857-66295876 | Msa0656940:intron | 20.0% |
| !! | TTGCTTAAAAATAGCATATA+TGG | + | chr4_3:66296593-66296612 | Msa0656940:intron | 20.0% |
| !!! | ATGTTAATATTAGTTTTGCT+TGG | + | chr4_3:66296623-66296642 | Msa0656940:intron | 20.0% |
| !!! | TGTTAATATTAGTTTTGCTT+GGG | + | chr4_3:66296624-66296643 | Msa0656940:intron | 20.0% |
| !!! | ATAAATTGTAAACTTTTCAG+GGG | - | chr4_3:66296841-66296860 | None:intergenic | 20.0% |
| !!! | GATAAATTGTAAACTTTTCA+GGG | - | chr4_3:66296842-66296861 | None:intergenic | 20.0% |
| !!! | TGATAAATTGTAAACTTTTC+AGG | - | chr4_3:66296843-66296862 | None:intergenic | 20.0% |
| !!! | TAAATTTTGATTACATGACA+TGG | + | chr4_3:66296955-66296974 | Msa0656940:intron | 20.0% |
| !!! | AAATTATTTTCCTACTGATT+TGG | + | chr4_3:66297153-66297172 | Msa0656940:intron | 20.0% |
| !!! | CAGTTTTTTGTGATAAAAAA+TGG | - | chr4_3:66297396-66297415 | None:intergenic | 20.0% |
| !! | TTACTTTGATTCTTCTTAAA+AGG | - | chr4_3:66297450-66297469 | None:intergenic | 20.0% |
| !!! | AGTTGTTTTAAATGTTAAGT+TGG | + | chr4_3:66297857-66297876 | Msa0656940:intron | 20.0% |
| !!! | ATCGTCATTATTTATTGATT+GGG | - | chr4_3:66298099-66298118 | None:intergenic | 20.0% |
| !! | TATCGTCATTATTTATTGAT+TGG | - | chr4_3:66298100-66298119 | None:intergenic | 20.0% |
| !! | TAAGTTATTGCTTTCTTATT+AGG | + | chr4_3:66298406-66298425 | Msa0656940:intron | 20.0% |
| !! | TTCTAAACAAGTAAACTATA+TGG | - | chr4_3:66298701-66298720 | None:intergenic | 20.0% |
| ! | GATTATGTATGATAGAGATA+TGG | + | chr4_3:66295543-66295562 | Msa0656940:CDS | 25.0% |
| !! | TTGTCAAGTTAGATCATTTT+TGG | + | chr4_3:66295930-66295949 | Msa0656940:intron | 25.0% |
| ! | AATAAGCTGAAAATAGCTTA+TGG | + | chr4_3:66296071-66296090 | Msa0656940:intron | 25.0% |
| !!! | TATTTTTTTCTCCCTTTTTG+AGG | + | chr4_3:66296286-66296305 | Msa0656940:intron | 25.0% |
| ! | ACAAATTACAACCTCAAAAA+GGG | - | chr4_3:66296300-66296319 | None:intergenic | 25.0% |
| ! | AACAAATTACAACCTCAAAA+AGG | - | chr4_3:66296301-66296320 | None:intergenic | 25.0% |
| ! | AAAGCTTCTCAAACAAAAAA+AGG | - | chr4_3:66296387-66296406 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTGAGAAGCTTT+TGG | + | chr4_3:66296387-66296406 | Msa0656940:intron | 25.0% |
| ! | TACCATGCAAAATCAATTTA+AGG | - | chr4_3:66296477-66296496 | None:intergenic | 25.0% |
| !!! | TCCTTAAATTGATTTTGCAT+GGG | + | chr4_3:66296473-66296492 | Msa0656940:intron | 25.0% |
| ! | ACATTAATAATTGAAGAGCT+TGG | + | chr4_3:66296800-66296819 | Msa0656940:intron | 25.0% |
| ! | TACAATTTATCAATCTGTTC+AGG | + | chr4_3:66296851-66296870 | Msa0656940:intron | 25.0% |
| ! | ACAATTTATCAATCTGTTCA+GGG | + | chr4_3:66296852-66296871 | Msa0656940:intron | 25.0% |
| ! | TTGATATATATTTGCTCCTA+AGG | - | chr4_3:66297182-66297201 | None:intergenic | 25.0% |
| ! | GAGCAAATATATATCAAAAC+CGG | + | chr4_3:66297185-66297204 | Msa0656940:intron | 25.0% |
| !!! | GGAGTATCGAAATATTTTAA+GGG | + | chr4_3:66297215-66297234 | Msa0656940:intron | 25.0% |
| !!! | GAGTATCGAAATATTTTAAG+GGG | + | chr4_3:66297216-66297235 | Msa0656940:intron | 25.0% |
| !!! | AGTATCGAAATATTTTAAGG+GGG | + | chr4_3:66297217-66297236 | Msa0656940:intron | 25.0% |
| !! | CTCTTAGGTTCAAATATTTT+AGG | + | chr4_3:66297320-66297339 | Msa0656940:intron | 25.0% |
| ! | TTAAACTAATCACATAATCC+AGG | + | chr4_3:66297909-66297928 | Msa0656940:intron | 25.0% |
| ! | TTAAAATGGTAAGTTTGTCT+TGG | + | chr4_3:66297958-66297977 | Msa0656940:intron | 25.0% |
| ! | ATAATATAATCCCTGAATGA+TGG | + | chr4_3:66298197-66298216 | Msa0656940:intron | 25.0% |
| ! | ATTATACACATAGAGAACAA+AGG | - | chr4_3:66298585-66298604 | None:intergenic | 25.0% |
| !!! | CAAAGAGACACATTTTTTTT+TGG | - | chr4_3:66298740-66298759 | None:intergenic | 25.0% |
| ! | TTTATTATAATCACTCCACT+TGG | + | chr4_3:66298774-66298793 | Msa0656940:three_prime_UTR | 25.0% |
| CTGTTCAATTGTATGATTCA+AGG | - | chr4_3:66295116-66295135 | None:intergenic | 30.0% | |
| TTTGATATCCATCAATGAAC+CGG | - | chr4_3:66295395-66295414 | None:intergenic | 30.0% | |
| ATGCTATAATCATTCTGATC+AGG | + | chr4_3:66295600-66295619 | Msa0656940:CDS | 30.0% | |
| !!! | TTTGTTTTGGAATTAGTGTG+TGG | + | chr4_3:66295755-66295774 | Msa0656940:intron | 30.0% |
| TACATACTATCGGTGTAAAA+AGG | - | chr4_3:66295897-66295916 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATAAGCTATTC+TGG | + | chr4_3:66296036-66296055 | Msa0656940:intron | 30.0% |
| TTATTGTGCAACTTCTTTGT+TGG | + | chr4_3:66296346-66296365 | Msa0656940:intron | 30.0% | |
| !! | GTCCTTAAATTGATTTTGCA+TGG | + | chr4_3:66296472-66296491 | Msa0656940:intron | 30.0% |
| AACACAAGAATCATCTATGA+TGG | - | chr4_3:66296533-66296552 | None:intergenic | 30.0% | |
| !! | GTCCTTAAATTGATTTTGCA+TGG | + | chr4_3:66296472-66296491 | Msa0656940:intron | 30.0% |
| !! | CCTTAAATTGATTTTGCATG+GGG | + | chr4_3:66296474-66296493 | Msa0656940:intron | 30.0% |
| ! | AGTTAGTTTGATGTAGAACT+TGG | - | chr4_3:66296665-66296684 | None:intergenic | 30.0% |
| TGTGGTTTCATCATCATTTA+AGG | + | chr4_3:66296978-66296997 | Msa0656940:intron | 30.0% | |
| ATATATCAAAACCGGATTGT+AGG | + | chr4_3:66297193-66297212 | Msa0656940:intron | 30.0% | |
| TATATCAAAACCGGATTGTA+GGG | + | chr4_3:66297194-66297213 | Msa0656940:intron | 30.0% | |
| !!! | GGGAGTATCGAAATATTTTA+AGG | + | chr4_3:66297214-66297233 | Msa0656940:intron | 30.0% |
| ATTTGTTTAATCGTGACTTC+TGG | + | chr4_3:66297246-66297265 | Msa0656940:intron | 30.0% | |
| ATTTGAACCTAAGAGAAAGA+AGG | - | chr4_3:66297315-66297334 | None:intergenic | 30.0% | |
| TTAGGATGATGAAACACTTT+AGG | + | chr4_3:66297338-66297357 | Msa0656940:intron | 30.0% | |
| GAAATAAAAAACAGGCAACT+TGG | + | chr4_3:66297553-66297572 | Msa0656940:intron | 30.0% | |
| AGCAAAATGTCTTCAAGAAA+AGG | - | chr4_3:66297707-66297726 | None:intergenic | 30.0% | |
| TTGCTTGTATGAGTATGTTA+CGG | + | chr4_3:66297722-66297741 | Msa0656940:intron | 30.0% | |
| CACACAAAAGGAAATGAATA+TGG | - | chr4_3:66297774-66297793 | None:intergenic | 30.0% | |
| TGATTCATTACCATCATTCA+GGG | - | chr4_3:66298210-66298229 | None:intergenic | 30.0% | |
| ATGATTCATTACCATCATTC+AGG | - | chr4_3:66298211-66298230 | None:intergenic | 30.0% | |
| ! | TTTTCATTGAATAGGACCTT+TGG | + | chr4_3:66298335-66298354 | Msa0656940:intron | 30.0% |
| TTTCATTGAATAGGACCTTT+GGG | + | chr4_3:66298336-66298355 | Msa0656940:intron | 30.0% | |
| TTATTAGGTGAGTGAACAAA+AGG | + | chr4_3:66298421-66298440 | Msa0656940:intron | 30.0% | |
| GTATACCAAGAGGTTTATTC+AGG | + | chr4_3:66295480-66295499 | Msa0656940:CDS | 35.0% | |
| AAACTTTGTCTGATCCTTCA+AGG | + | chr4_3:66295518-66295537 | Msa0656940:CDS | 35.0% | |
| TCATACATAATCCTCCTTGA+AGG | - | chr4_3:66295535-66295554 | None:intergenic | 35.0% | |
| TATGATAGAGATATGGCTAG+AGG | + | chr4_3:66295550-66295569 | Msa0656940:CDS | 35.0% | |
| ATGATAGAGATATGGCTAGA+GGG | + | chr4_3:66295551-66295570 | Msa0656940:CDS | 35.0% | |
| AAAACAATGAAGGGTCACTT+TGG | - | chr4_3:66296180-66296199 | None:intergenic | 35.0% | |
| ! | ACCCTTCATTGTTTTCATCT+GGG | + | chr4_3:66296185-66296204 | Msa0656940:intron | 35.0% |
| TCCCAGATGAAAACAATGAA+GGG | - | chr4_3:66296189-66296208 | None:intergenic | 35.0% | |
| ! | TTCATTGTTTTCATCTGGGA+GGG | + | chr4_3:66296189-66296208 | Msa0656940:intron | 35.0% |
| ! | TTTGTCAAGGTTCTGATTTG+TGG | + | chr4_3:66296216-66296235 | Msa0656940:intron | 35.0% |
| ! | TCTCATGTTTTGTCAGTGTA+TGG | + | chr4_3:66296320-66296339 | Msa0656940:intron | 35.0% |
| ! | ATGCTCTTTTTACACCATCA+TGG | + | chr4_3:66296431-66296450 | Msa0656940:intron | 35.0% |
| AACACAAGAATCATCCATGA+TGG | - | chr4_3:66296448-66296467 | None:intergenic | 35.0% | |
| ATGGTATCTCAAGCAAGTTT+AGG | + | chr4_3:66296491-66296510 | Msa0656940:intron | 35.0% | |
| CCCCATGCAAAATCAATTTA+AGG | - | chr4_3:66296562-66296581 | None:intergenic | 35.0% | |
| CATTTGAAGAAGACTCATCA+AGG | + | chr4_3:66296774-66296793 | Msa0656940:intron | 35.0% | |
| !! | TTATTTTGCAGTGGAAAACC+CGG | - | chr4_3:66296896-66296915 | None:intergenic | 35.0% |
| !!! | CAGATTAGCTTATTTTGCAG+TGG | - | chr4_3:66296905-66296924 | None:intergenic | 35.0% |
| TTTGATTACATGACATGGTG+TGG | + | chr4_3:66296960-66296979 | Msa0656940:intron | 35.0% | |
| AAGCTTTCACAGAACTGAAA+TGG | + | chr4_3:66297080-66297099 | Msa0656940:intron | 35.0% | |
| !! | TTCTGGTTCCTGATATTTAC+TGG | + | chr4_3:66297263-66297282 | Msa0656940:intron | 35.0% |
| ATCAAGCACCAGTAAATATC+AGG | - | chr4_3:66297274-66297293 | None:intergenic | 35.0% | |
| GAAAGAAGGAGATAGTACAA+AGG | - | chr4_3:66297301-66297320 | None:intergenic | 35.0% | |
| ACTATCTCCTTCTTTCTCTT+AGG | + | chr4_3:66297305-66297324 | Msa0656940:intron | 35.0% | |
| !! | AGTACATTTTAAGTGTGCTG+TGG | + | chr4_3:66297494-66297513 | Msa0656940:intron | 35.0% |
| AAAAACAGGCAACTTGGTTT+AGG | + | chr4_3:66297559-66297578 | Msa0656940:intron | 35.0% | |
| AAAACAGGCAACTTGGTTTA+GGG | + | chr4_3:66297560-66297579 | Msa0656940:intron | 35.0% | |
| !! | GTGTAACTGACTTACGTTTT+GGG | + | chr4_3:66297582-66297601 | Msa0656940:intron | 35.0% |
| CGTTGACATATACACACAAA+AGG | - | chr4_3:66297786-66297805 | None:intergenic | 35.0% | |
| !! | AGTAACTTGTTCAGTGTTTG+TGG | - | chr4_3:66297826-66297845 | None:intergenic | 35.0% |
| ACAATCAGAAAACAACATCC+TGG | - | chr4_3:66297930-66297949 | None:intergenic | 35.0% | |
| ATCATGCCTTCAAAAGAGAT+AGG | + | chr4_3:66298226-66298245 | Msa0656940:intron | 35.0% | |
| TCATGCCTTCAAAAGAGATA+GGG | + | chr4_3:66298227-66298246 | Msa0656940:intron | 35.0% | |
| ! | AATGTCCCTATCTCTTTTGA+AGG | - | chr4_3:66298235-66298254 | None:intergenic | 35.0% |
| TTCATTGAATAGGACCTTTG+GGG | + | chr4_3:66298337-66298356 | Msa0656940:intron | 35.0% | |
| TGAGTGAACAAAAGGATGAA+TGG | + | chr4_3:66298429-66298448 | Msa0656940:CDS | 35.0% | |
| !! | TGAAGGTGGCTTTAAGCTTT+GGG | - | chr4_3:66295315-66295334 | None:intergenic | 40.0% |
| !! | TTGAAGGTGGCTTTAAGCTT+TGG | - | chr4_3:66295316-66295335 | None:intergenic | 40.0% |
| !! | ACTTGCAAGAAAGTATCACC+CGG | + | chr4_3:66295429-66295448 | Msa0656940:CDS | 40.0% |
| ! | GACCCTTCATTGTTTTCATC+TGG | + | chr4_3:66296184-66296203 | Msa0656940:intron | 40.0% |
| CTCCCAGATGAAAACAATGA+AGG | - | chr4_3:66296190-66296209 | None:intergenic | 40.0% | |
| ! | CTTCATTGTTTTCATCTGGG+AGG | + | chr4_3:66296188-66296207 | Msa0656940:intron | 40.0% |
| GTAGAGCTTATGACTGAAAC+CGG | + | chr4_3:66296874-66296893 | Msa0656940:intron | 40.0% | |
| TAGAGCTTATGACTGAAACC+GGG | + | chr4_3:66296875-66296894 | Msa0656940:intron | 40.0% | |
| TTAAGGCTTCCTCCTTATCT+TGG | + | chr4_3:66296995-66297014 | Msa0656940:intron | 40.0% | |
| ATTGAATTGCGACCACAATG+TGG | - | chr4_3:66297023-66297042 | None:intergenic | 40.0% | |
| CCTAAGGTAACCAAATCAGT+AGG | - | chr4_3:66297166-66297185 | None:intergenic | 40.0% | |
| !! | CCTACTGATTTGGTTACCTT+AGG | + | chr4_3:66297163-66297182 | Msa0656940:intron | 40.0% |
| TTTCGATACTCCCTACAATC+CGG | - | chr4_3:66297207-66297226 | None:intergenic | 40.0% | |
| !! | GGTGTAACTGACTTACGTTT+TGG | + | chr4_3:66297581-66297600 | Msa0656940:intron | 40.0% |
| ! | AACTTGTTCAGTGTTTGTGG+TGG | - | chr4_3:66297823-66297842 | None:intergenic | 40.0% |
| TCATTGAATAGGACCTTTGG+GGG | + | chr4_3:66298338-66298357 | Msa0656940:intron | 40.0% | |
| AGGATGAATGGAAATCTCGT+TGG | + | chr4_3:66298441-66298460 | Msa0656940:CDS | 40.0% | |
| TGCTATCACTTCTTCTCTTC+AGG | - | chr4_3:66298484-66298503 | None:intergenic | 40.0% | |
| GAAGAGAAGAAGTGATAGCA+AGG | + | chr4_3:66298484-66298503 | Msa0656940:CDS | 40.0% | |
| AAGAAGTGATAGCAAGGTCA+TGG | + | chr4_3:66298490-66298509 | Msa0656940:CDS | 40.0% | |
| ATGCTGCTGATAATACGTCA+TGG | + | chr4_3:66298513-66298532 | Msa0656940:CDS | 40.0% | |
| TGCTGCTGATAATACGTCAT+GGG | + | chr4_3:66298514-66298533 | Msa0656940:CDS | 40.0% | |
| GAGAGAGAGATGCGTTGTTA+CGG | + | chr4_3:66295175-66295194 | Msa0656940:exon | 45.0% | |
| TGTTACGGCTTAACAATCCC+CGG | + | chr4_3:66295190-66295209 | Msa0656940:CDS | 45.0% | |
| ATGAAGCGATAATCGCTTCC+GGG | - | chr4_3:66295211-66295230 | None:intergenic | 45.0% | |
| GATGAAGCGATAATCGCTTC+CGG | - | chr4_3:66295212-66295231 | None:intergenic | 45.0% | |
| AGGATGACCCGAATGAGATT+CGG | - | chr4_3:66295291-66295310 | None:intergenic | 45.0% | |
| CTTAAAGCCACCTTCAACGA+CGG | + | chr4_3:66295319-66295338 | Msa0656940:CDS | 45.0% | |
| ACCAGAATCCGGTTCATTGA+TGG | + | chr4_3:66295384-66295403 | Msa0656940:CDS | 45.0% | |
| TCCATCAATGAACCGGATTC+TGG | - | chr4_3:66295388-66295407 | None:intergenic | 45.0% | |
| CTGCACCTGAATAAACCTCT+TGG | - | chr4_3:66295488-66295507 | None:intergenic | 45.0% | |
| CAAGAGGTTTATTCAGGTGC+AGG | + | chr4_3:66295486-66295505 | Msa0656940:CDS | 45.0% | |
| CTTTGTCTGATCCTTCAAGG+AGG | + | chr4_3:66295521-66295540 | Msa0656940:CDS | 45.0% | |
| AATGTGGAGCCAAGATAAGG+AGG | - | chr4_3:66297007-66297026 | None:intergenic | 45.0% | |
| CACAATGTGGAGCCAAGATA+AGG | - | chr4_3:66297010-66297029 | None:intergenic | 45.0% | |
| CTTATCTTGGCTCCACATTG+TGG | + | chr4_3:66297008-66297027 | Msa0656940:intron | 45.0% | |
| CATTGAATAGGACCTTTGGG+GGG | + | chr4_3:66298339-66298358 | Msa0656940:intron | 45.0% | |
| TGCTGATAATACGTCATGGG+CGG | + | chr4_3:66298517-66298536 | Msa0656940:CDS | 45.0% | |
| !!! | TTAATAAATTTTCATAATTT+TGG | - | chr4_3:66297048-66297067 | None:intergenic | 5.0% |
| !! | TATAATAAAATTAAACAAAA+TGG | - | chr4_3:66298763-66298782 | None:intergenic | 5.0% |
| TGAAGCGATAATCGCTTCCG+GGG | - | chr4_3:66295210-66295229 | None:intergenic | 50.0% | |
| AGTGAAGGAGGAGGTAGTGT+TGG | - | chr4_3:66295238-66295257 | None:intergenic | 50.0% | |
| TGAGATTCGGGTCATGGGTA+TGG | - | chr4_3:66295278-66295297 | None:intergenic | 50.0% | |
| CCGAATGAGATTCGGGTCAT+GGG | - | chr4_3:66295283-66295302 | None:intergenic | 50.0% | |
| CCCATGACCCGAATCTCATT+CGG | + | chr4_3:66295280-66295299 | Msa0656940:CDS | 50.0% | |
| CCATGACCCGAATCTCATTC+GGG | + | chr4_3:66295281-66295300 | Msa0656940:CDS | 50.0% | |
| GGATGACCCGAATGAGATTC+GGG | - | chr4_3:66295290-66295309 | None:intergenic | 50.0% | |
| !! | GGTGGCTTTAAGCTTTGGGA+AGG | - | chr4_3:66295311-66295330 | None:intergenic | 50.0% |
| ACGGAGCTTCTACGATCTTC+TGG | + | chr4_3:66295357-66295376 | Msa0656940:CDS | 50.0% | |
| CGGAGCTTCTACGATCTTCT+GGG | + | chr4_3:66295358-66295377 | Msa0656940:CDS | 50.0% | |
| CTTCTGGGCATACCAGAATC+CGG | + | chr4_3:66295373-66295392 | Msa0656940:CDS | 50.0% | |
| GTATACTCTTCCACCCGATC+CGG | - | chr4_3:66295466-66295485 | None:intergenic | 50.0% | |
| ! | GGGTGGAAGAGTATACCAAG+AGG | + | chr4_3:66295470-66295489 | Msa0656940:CDS | 50.0% |
| GAGGTTTATTCAGGTGCAGG+AGG | + | chr4_3:66295489-66295508 | Msa0656940:CDS | 50.0% | |
| !! | CTGGGAGGGTTGATTTGTCA+AGG | + | chr4_3:66296203-66296222 | Msa0656940:intron | 50.0% |
| ! | AGTGTTTGTGGTGGTGAGCT+GGG | - | chr4_3:66297814-66297833 | None:intergenic | 50.0% |
| ! | AATAGGACCTTTGGGGGGAT+TGG | + | chr4_3:66298344-66298363 | Msa0656940:intron | 50.0% |
| CGTTGGCAATCTCAACTCGA+TGG | + | chr4_3:66298458-66298477 | Msa0656940:CDS | 50.0% | |
| !! | TCATGGGTATGGTGGTGGGT+CGG | - | chr4_3:66295267-66295286 | None:intergenic | 55.0% |
| GATTCGGGTCATGGGTATGG+TGG | - | chr4_3:66295275-66295294 | None:intergenic | 55.0% | |
| CCCGAATGAGATTCGGGTCA+TGG | - | chr4_3:66295284-66295303 | None:intergenic | 55.0% | |
| TCACCCGGATGTTTCACCAC+CGG | + | chr4_3:66295444-66295463 | Msa0656940:CDS | 55.0% | |
| GATCCGGTGGTGAAACATCC+GGG | - | chr4_3:66295450-66295469 | None:intergenic | 55.0% | |
| CGATCCGGTGGTGAAACATC+CGG | - | chr4_3:66295451-66295470 | None:intergenic | 55.0% | |
| CGGATGTTTCACCACCGGAT+CGG | + | chr4_3:66295449-66295468 | Msa0656940:CDS | 55.0% | |
| GGATGTTTCACCACCGGATC+GGG | + | chr4_3:66295450-66295469 | Msa0656940:CDS | 55.0% | |
| ! | CAGTGTTTGTGGTGGTGAGC+TGG | - | chr4_3:66297815-66297834 | None:intergenic | 55.0% |
| CTTCTAGCCAATCCCCCCAA+AGG | - | chr4_3:66298354-66298373 | None:intergenic | 55.0% | |
| CGGAAGGACAGTGAAGGAGG+AGG | - | chr4_3:66295247-66295266 | None:intergenic | 60.0% | |
| GGTCGGAAGGACAGTGAAGG+AGG | - | chr4_3:66295250-66295269 | None:intergenic | 60.0% | |
| GTGGGTCGGAAGGACAGTGA+AGG | - | chr4_3:66295253-66295272 | None:intergenic | 60.0% | |
| CGGGTCATGGGTATGGTGGT+GGG | - | chr4_3:66295271-66295290 | None:intergenic | 60.0% | |
| TCGGGTCATGGGTATGGTGG+TGG | - | chr4_3:66295272-66295291 | None:intergenic | 60.0% | |
| CACAACGCCGTCGTTGAAGG+TGG | - | chr4_3:66295329-66295348 | None:intergenic | 60.0% | |
| CACCTTCAACGACGGCGTTG+TGG | + | chr4_3:66295327-66295346 | Msa0656940:CDS | 60.0% | |
| CTTCAACGACGGCGTTGTGG+CGG | + | chr4_3:66295330-66295349 | Msa0656940:CDS | 60.0% | |
| TGTTTCACCACCGGATCGGG+TGG | + | chr4_3:66295453-66295472 | Msa0656940:CDS | 60.0% | |
| TACTCTTCCACCCGATCCGG+TGG | - | chr4_3:66295463-66295482 | None:intergenic | 60.0% | |
| GGCTCGAATACGCCAGCAGA+GGG | + | chr4_3:66298538-66298557 | Msa0656940:CDS | 60.0% | |
| GCTCGAATACGCCAGCAGAG+GGG | + | chr4_3:66298539-66298558 | Msa0656940:CDS | 60.0% | |
| CTCGAATACGCCAGCAGAGG+GGG | + | chr4_3:66298540-66298559 | Msa0656940:CDS | 60.0% | |
| TCGAATACGCCAGCAGAGGG+GGG | + | chr4_3:66298541-66298560 | Msa0656940:CDS | 60.0% | |
| !! | GGGTATGGTGGTGGGTCGGA+AGG | - | chr4_3:66295263-66295282 | None:intergenic | 65.0% |
| CGCCACAACGCCGTCGTTGA+AGG | - | chr4_3:66295332-66295351 | None:intergenic | 65.0% | |
| ! | ACGGCGTTGTGGCGGAGGAA+CGG | + | chr4_3:66295338-66295357 | Msa0656940:CDS | 65.0% |
| CGGCTCGAATACGCCAGCAG+AGG | + | chr4_3:66298537-66298556 | Msa0656940:CDS | 65.0% | |
| CGAATACGCCAGCAGAGGGG+GGG | + | chr4_3:66298542-66298561 | Msa0656940:CDS | 65.0% | |
| GTCACAATCCCCCCCTCTGC+TGG | - | chr4_3:66298553-66298572 | None:intergenic | 65.0% | |
| CAACGACGGCGTTGTGGCGG+AGG | + | chr4_3:66295333-66295352 | Msa0656940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 66295085 | 66298808 | 66295085 | ID=Msa0656940;Name=Msa0656940 |
| chr4_3 | mRNA | 66295085 | 66298808 | 66295085 | ID=Msa0656940-mRNA-1;Parent=Msa0656940;Name=Msa0656940-mRNA-1;_AED=0.00;_eAED=0.00;_QI=99|1|1|1|1|1|2|237|193 |
| chr4_3 | exon | 66295085 | 66295621 | 66295085 | ID=Msa0656940-mRNA-1:exon:19055;Parent=Msa0656940-mRNA-1 |
| chr4_3 | exon | 66298428 | 66298808 | 66298428 | ID=Msa0656940-mRNA-1:exon:19056;Parent=Msa0656940-mRNA-1 |
| chr4_3 | five_prime_UTR | 66295085 | 66295183 | 66295085 | ID=Msa0656940-mRNA-1:five_prime_utr;Parent=Msa0656940-mRNA-1 |
| chr4_3 | CDS | 66295184 | 66295621 | 66295184 | ID=Msa0656940-mRNA-1:cds;Parent=Msa0656940-mRNA-1 |
| chr4_3 | CDS | 66298428 | 66298571 | 66298428 | ID=Msa0656940-mRNA-1:cds;Parent=Msa0656940-mRNA-1 |
| chr4_3 | three_prime_UTR | 66298572 | 66298808 | 66298572 | ID=Msa0656940-mRNA-1:three_prime_utr;Parent=Msa0656940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
