Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661680 | XP_013462296.1 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 8.11e-99 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661680 | sp|P26585|HMGL_SOYBN | 79.508 | 122 | 22 | 2 | 1 | 121 | 1 | 120 | 6.74e-57 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661680 | I3S988 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 3.87e-99 | 291 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0661680 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0661680 | Msa1173530 | 0.912621 | 1.578318e-83 | -8.615850e-47 |
| Msa0186280 | Msa0661680 | 0.876326 | 1.525839e-68 | -8.615850e-47 |
| Msa0386070 | Msa0661680 | 0.870714 | 1.184123e-66 | -8.615850e-47 |
| Msa0387350 | Msa0661680 | 0.901945 | 1.602442e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661680 | MtrunA17_Chr3g0143991 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 7.46e-103 | 291 |
| Msa0661680 | MtrunA17_Chr5g0407011 | 57.895 | 133 | 48 | 4 | 5 | 137 | 3 | 127 | 1.42e-37 | 125 |
| Msa0661680 | MtrunA17_Chr8g0370431 | 60.150 | 133 | 44 | 5 | 5 | 137 | 3 | 126 | 1.77e-37 | 125 |
| Msa0661680 | MtrunA17_Chr7g0242251 | 70.297 | 101 | 28 | 1 | 41 | 141 | 47 | 145 | 5.84e-36 | 122 |
| Msa0661680 | MtrunA17_Chr1g0212341 | 60.000 | 80 | 32 | 0 | 41 | 120 | 98 | 177 | 5.53e-27 | 100 |
| Msa0661680 | MtrunA17_Chr4g0052011 | 47.674 | 86 | 45 | 0 | 35 | 120 | 54 | 139 | 4.26e-23 | 89.0 |
| Msa0661680 | MtrunA17_Chr1g0155251 | 46.667 | 75 | 39 | 1 | 41 | 115 | 554 | 627 | 1.11e-12 | 64.7 |
| Msa0661680 | MtrunA17_Chr8g0387931 | 35.714 | 98 | 60 | 1 | 41 | 138 | 262 | 356 | 2.94e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661680 | AT1G20693.2 | 66.013 | 153 | 41 | 4 | 1 | 153 | 1 | 142 | 1.03e-53 | 167 |
| Msa0661680 | AT1G20693.3 | 65.693 | 137 | 38 | 3 | 1 | 137 | 1 | 128 | 1.52e-47 | 151 |
| Msa0661680 | AT1G20693.1 | 65.693 | 137 | 38 | 3 | 1 | 137 | 1 | 128 | 1.57e-47 | 151 |
| Msa0661680 | AT1G20696.1 | 63.504 | 137 | 38 | 3 | 1 | 137 | 1 | 125 | 8.50e-46 | 146 |
| Msa0661680 | AT2G17560.3 | 54.483 | 145 | 54 | 4 | 1 | 144 | 1 | 134 | 2.12e-41 | 135 |
| Msa0661680 | AT2G17560.2 | 52.258 | 155 | 56 | 4 | 1 | 155 | 1 | 137 | 5.14e-41 | 134 |
| Msa0661680 | AT2G17560.1 | 52.258 | 155 | 56 | 4 | 1 | 155 | 1 | 137 | 5.14e-41 | 134 |
| Msa0661680 | AT1G20696.5 | 60.800 | 125 | 39 | 2 | 1 | 125 | 1 | 115 | 8.88e-41 | 134 |
| Msa0661680 | AT1G20696.2 | 63.559 | 118 | 33 | 2 | 1 | 118 | 1 | 108 | 1.11e-40 | 134 |
| Msa0661680 | AT3G51880.2 | 65.517 | 116 | 33 | 2 | 26 | 141 | 36 | 144 | 1.55e-39 | 132 |
| Msa0661680 | AT3G51880.5 | 69.608 | 102 | 26 | 1 | 40 | 141 | 48 | 144 | 1.92e-39 | 132 |
| Msa0661680 | AT3G51880.1 | 69.608 | 102 | 26 | 1 | 40 | 141 | 48 | 144 | 1.92e-39 | 132 |
| Msa0661680 | AT3G51880.3 | 69.608 | 102 | 26 | 1 | 40 | 141 | 48 | 144 | 1.92e-39 | 132 |
| Msa0661680 | AT3G51880.4 | 69.388 | 98 | 25 | 1 | 40 | 137 | 48 | 140 | 2.50e-37 | 125 |
| Msa0661680 | AT1G20696.3 | 66.327 | 98 | 29 | 2 | 53 | 150 | 1 | 94 | 1.62e-33 | 114 |
| Msa0661680 | AT4G35570.1 | 46.667 | 120 | 53 | 1 | 1 | 120 | 1 | 109 | 2.19e-32 | 112 |
| Msa0661680 | AT4G35570.2 | 46.667 | 120 | 53 | 1 | 1 | 120 | 1 | 109 | 2.19e-32 | 112 |
| Msa0661680 | AT1G20696.4 | 64.706 | 85 | 28 | 1 | 53 | 137 | 1 | 83 | 1.86e-28 | 101 |
| Msa0661680 | AT2G34450.4 | 37.374 | 99 | 47 | 1 | 45 | 143 | 63 | 146 | 2.69e-19 | 79.3 |
| Msa0661680 | AT2G34450.3 | 37.374 | 99 | 47 | 1 | 45 | 143 | 63 | 146 | 2.69e-19 | 79.3 |
| Msa0661680 | AT2G34450.1 | 37.374 | 99 | 47 | 1 | 45 | 143 | 63 | 146 | 2.69e-19 | 79.3 |
| Msa0661680 | AT2G34450.2 | 37.000 | 100 | 47 | 2 | 45 | 143 | 63 | 147 | 6.26e-18 | 75.9 |
| Msa0661680 | AT5G23420.1 | 46.739 | 92 | 41 | 2 | 26 | 110 | 89 | 179 | 1.35e-15 | 71.6 |
| Msa0661680 | AT4G23800.1 | 45.000 | 80 | 39 | 2 | 41 | 118 | 375 | 451 | 1.03e-11 | 62.0 |
| Msa0661680 | AT4G23800.2 | 45.000 | 80 | 39 | 2 | 41 | 118 | 369 | 445 | 1.07e-11 | 62.0 |
Find 85 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGTCTCTTAGGCTTGTT+AGG | 0.179440 | 4_3:+73150500 | None:intergenic |
| ACTAAAATAGTTGGATTTAA+AGG | 0.181207 | 4_3:+73149321 | None:intergenic |
| GATAAACATGTCTTACTTCT+AGG | 0.186530 | 4_3:-73149426 | Msa0661680:three_prime_UTR |
| TTTCTTGTTATATGCCTTCA+TGG | 0.203700 | 4_3:+73149819 | None:intergenic |
| TTACTTAGCATCGGCTTTCT+TGG | 0.250421 | 4_3:+73150788 | None:intergenic |
| CTTGGATTCACCCTTGGACT+TGG | 0.277403 | 4_3:+73150806 | None:intergenic |
| CAATCCAATGGTAGGGATTT+AGG | 0.280090 | 4_3:+73151097 | None:intergenic |
| AAAGCACTTGGAGGTCTCTT+AGG | 0.309499 | 4_3:+73150491 | None:intergenic |
| TTAGGCTTGTTAGGGTCCTT+TGG | 0.339552 | 4_3:+73150509 | None:intergenic |
| TTTGGTTCCTTTCCCTTGGC+TGG | 0.339914 | 4_3:+73150527 | None:intergenic |
| GCAGACACAGCTTTGTTGTC+AGG | 0.342321 | 4_3:+73150113 | None:intergenic |
| GTAGATATTAAGCCCGTAAA+AGG | 0.346077 | 4_3:+73151041 | None:intergenic |
| GTCCTTTGGTTCCTTTCCCT+TGG | 0.359297 | 4_3:+73150523 | None:intergenic |
| GGATTTAAAGGTACAGATAA+AGG | 0.361741 | 4_3:+73149333 | None:intergenic |
| GGCTGGTTTCCTTCCGCCCT+TGG | 0.371407 | 4_3:+73150544 | None:intergenic |
| GCTGTTGAGGAAGAAGAATC+TGG | 0.372128 | 4_3:-73149698 | Msa0661680:CDS |
| TTGCAGGTGGGCAAAGCTGC+TGG | 0.380613 | 4_3:-73150014 | Msa0661680:intron |
| TGGGGTTGGAAACTAGGGTT+TGG | 0.387960 | 4_3:+73150944 | None:intergenic |
| GGCTTTCTTGGATTCACCCT+TGG | 0.397041 | 4_3:+73150800 | None:intergenic |
| GGGGTTGGAAACTAGGGTTT+GGG | 0.405858 | 4_3:+73150945 | None:intergenic |
| GTGGAATGGGGTTGGAAACT+AGG | 0.407115 | 4_3:+73150938 | None:intergenic |
| CACCTCTTAACTAAAATAGT+TGG | 0.422641 | 4_3:+73149312 | None:intergenic |
| AACGTACCGAACGGTGGAAT+GGG | 0.424680 | 4_3:+73150925 | None:intergenic |
| TTTCCTTCCGCCCTTGGTAG+TGG | 0.445999 | 4_3:+73150550 | None:intergenic |
| TCCAACCCCATTCCACCGTT+CGG | 0.447103 | 4_3:-73150931 | Msa0661680:intron |
| GCAAAGCTGCTGGAGCAAAA+TGG | 0.450601 | 4_3:-73150004 | Msa0661680:CDS |
| GAAGGCATATAACAAGAAAC+AGG | 0.452913 | 4_3:-73149815 | Msa0661680:intron |
| GGGTTGGAAACTAGGGTTTG+GGG | 0.453982 | 4_3:+73150946 | None:intergenic |
| GAGGTCTCTTAGGCTTGTTA+GGG | 0.458151 | 4_3:+73150501 | None:intergenic |
| TCTTCTTCCTCAACAGCAGC+TGG | 0.462822 | 4_3:+73149704 | None:intergenic |
| GGCGGCGCCCTTCTTATTCA+CGG | 0.463220 | 4_3:+73150571 | None:intergenic |
| ATGAAAATCAATCCAATGGT+AGG | 0.463826 | 4_3:+73151089 | None:intergenic |
| CAGACACAGCTTTGTTGTCA+GGG | 0.494732 | 4_3:+73150114 | None:intergenic |
| TGGAATGGGGTTGGAAACTA+GGG | 0.504893 | 4_3:+73150939 | None:intergenic |
| CCCGCCTAAATCCCTACCAT+TGG | 0.507483 | 4_3:-73151101 | Msa0661680:five_prime_UTR |
| ATGCAGCAAAAGCAGAGAAA+AGG | 0.511362 | 4_3:-73149861 | Msa0661680:CDS |
| AAACGATGATGCGGCAGGAT+AGG | 0.515254 | 4_3:+73149211 | None:intergenic |
| GGTTGGAAACTAGGGTTTGG+GGG | 0.520276 | 4_3:+73150947 | None:intergenic |
| GATGATGATAACATTTATGT+AGG | 0.521769 | 4_3:-73149497 | Msa0661680:three_prime_UTR |
| TGAAGGTCCAGCTGCTGTTG+AGG | 0.526952 | 4_3:-73149711 | Msa0661680:CDS |
| GAAGGGCGCCGCCACTACCA+AGG | 0.539172 | 4_3:-73150561 | Msa0661680:CDS |
| AAACGTACCGAACGGTGGAA+TGG | 0.540893 | 4_3:+73150924 | None:intergenic |
| GGGCGGAAGGAAACCAGCCA+AGG | 0.544457 | 4_3:-73150540 | Msa0661680:CDS |
| TAGGCTTGCCGTGAATAAGA+AGG | 0.545546 | 4_3:-73150579 | Msa0661680:CDS |
| TATGCAAACGATGATGCGGC+AGG | 0.549477 | 4_3:+73149206 | None:intergenic |
| AAGGAAACCAGCCAAGGGAA+AGG | 0.549929 | 4_3:-73150534 | Msa0661680:CDS |
| ACCGAACGGTGGAATGGGGT+TGG | 0.550575 | 4_3:+73150930 | None:intergenic |
| TGTGATTGTTGTCAGGCTGA+AGG | 0.555256 | 4_3:-73149728 | Msa0661680:intron |
| GGATTGAACTTACTTAGCAT+CGG | 0.556269 | 4_3:+73150779 | None:intergenic |
| AAAACGAAGAAAGCACTTGG+AGG | 0.558317 | 4_3:+73150482 | None:intergenic |
| AGCCAAGGGAAAGGAACCAA+AGG | 0.561691 | 4_3:-73150525 | Msa0661680:CDS |
| GAGGATGACGAATAGAAACT+TGG | 0.567255 | 4_3:-73149519 | Msa0661680:exon |
| CTGTTGAGGAAGAAGAATCT+GGG | 0.568023 | 4_3:-73149697 | Msa0661680:CDS |
| AAGGGCGCCGCCACTACCAA+GGG | 0.571773 | 4_3:-73150560 | Msa0661680:CDS |
| CCGCCACTACCAAGGGCGGA+AGG | 0.572782 | 4_3:-73150553 | Msa0661680:CDS |
| GAAAAGACAACATTTACCAA+GGG | 0.573601 | 4_3:+73149389 | None:intergenic |
| TGAAAATCAATCCAATGGTA+GGG | 0.574474 | 4_3:+73151090 | None:intergenic |
| TGAAATGAAAATCAATCCAA+TGG | 0.576914 | 4_3:+73151085 | None:intergenic |
| ACGAGAGACACACTAGGGTA+AGG | 0.580632 | 4_3:+73151007 | None:intergenic |
| TGAAAAGACAACATTTACCA+AGG | 0.587312 | 4_3:+73149388 | None:intergenic |
| ATGAAAACGAAGAAAGCACT+TGG | 0.589018 | 4_3:+73150479 | None:intergenic |
| CATGAAAGGAGCCAAGTCCA+AGG | 0.590256 | 4_3:-73150817 | Msa0661680:CDS |
| AAACAGAAGGAAACAAACAT+AGG | 0.591594 | 4_3:+73149180 | None:intergenic |
| TTGTATACGAGAGACACACT+AGG | 0.596814 | 4_3:+73151001 | None:intergenic |
| CCTTCCGCCCTTGGTAGTGG+CGG | 0.599374 | 4_3:+73150553 | None:intergenic |
| TGAAGTGCATGATGAGAATG+AGG | 0.606285 | 4_3:-73149663 | Msa0661680:CDS |
| GGCGCCGCCACTACCAAGGG+CGG | 0.610298 | 4_3:-73150557 | Msa0661680:CDS |
| AGGCTTGCCGTGAATAAGAA+GGG | 0.612713 | 4_3:-73150578 | Msa0661680:CDS |
| CTAGGGTAAGGATCAAATGC+GGG | 0.618398 | 4_3:+73151019 | None:intergenic |
| AGAATATGAGAAAACCATGA+AGG | 0.619628 | 4_3:-73149833 | Msa0661680:CDS |
| TGAGAATGAGGATGATGATG+AGG | 0.623282 | 4_3:-73149651 | Msa0661680:CDS |
| TGTATACGAGAGACACACTA+GGG | 0.625797 | 4_3:+73151002 | None:intergenic |
| AATGAGGATGATGATGAGGA+TGG | 0.627725 | 4_3:-73149647 | Msa0661680:CDS |
| ACGTACCGAACGGTGGAATG+GGG | 0.629092 | 4_3:+73150926 | None:intergenic |
| AGAGGAAACGTACCGAACGG+TGG | 0.632057 | 4_3:+73150919 | None:intergenic |
| ATGAAAGGAGCCAAGTCCAA+GGG | 0.636209 | 4_3:-73150816 | Msa0661680:CDS |
| GGCGGAAGGAAACCAGCCAA+GGG | 0.638094 | 4_3:-73150539 | Msa0661680:CDS |
| AGCAAAAGCAGAGAAAAGGA+AGG | 0.642820 | 4_3:-73149857 | Msa0661680:CDS |
| CCAATGGTAGGGATTTAGGC+GGG | 0.648488 | 4_3:+73151101 | None:intergenic |
| GATATATGCAAACGATGATG+CGG | 0.653333 | 4_3:+73149202 | None:intergenic |
| ACGTGAATAGCTAAAATACG+AGG | 0.663789 | 4_3:-73149363 | Msa0661680:three_prime_UTR |
| TCCAATGGTAGGGATTTAGG+CGG | 0.670919 | 4_3:+73151100 | None:intergenic |
| CGTGAATAGCTAAAATACGA+GGG | 0.671366 | 4_3:-73149362 | Msa0661680:three_prime_UTR |
| ACTAGGGTAAGGATCAAATG+CGG | 0.686246 | 4_3:+73151018 | None:intergenic |
| TGATGAGGATGGCAGTGAAG+AGG | 0.697028 | 4_3:-73149636 | Msa0661680:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTATTCAATTATAATAAT+TGG | + | chr4_3:73149958-73149977 | None:intergenic | 10.0% |
| !! | ATGTATTCAATTATAATAAT+TGG | + | chr4_3:73149958-73149977 | None:intergenic | 10.0% |
| !!! | TGAATTTCAATTTCCTTTTA+CGG | - | chr4_3:73149246-73149265 | Msa0661680:three_prime_UTR | 20.0% |
| !! | AAGAGGAAATTATGAAAAAA+CGG | + | chr4_3:73149545-73149564 | None:intergenic | 20.0% |
| !!! | ATTGATATTGTTGATTTTGA+TGG | - | chr4_3:73149698-73149717 | Msa0661680:CDS | 20.0% |
| !!! | TTTTTATTCTGAAATTTGTG+TGG | - | chr4_3:73150121-73150140 | Msa0661680:CDS | 20.0% |
| !! | GTATGTACTGTTATATTTAT+TGG | - | chr4_3:73150337-73150356 | Msa0661680:intron | 20.0% |
| !! | ACTAAAATAGTTGGATTTAA+AGG | + | chr4_3:73150982-73151001 | None:intergenic | 20.0% |
| !!! | TGAATTTCAATTTCCTTTTA+CGG | - | chr4_3:73149246-73149265 | Msa0661680:three_prime_UTR | 20.0% |
| !! | AAGAGGAAATTATGAAAAAA+CGG | + | chr4_3:73149545-73149564 | None:intergenic | 20.0% |
| !!! | ATTGATATTGTTGATTTTGA+TGG | - | chr4_3:73149698-73149717 | Msa0661680:CDS | 20.0% |
| !!! | TTTTTATTCTGAAATTTGTG+TGG | - | chr4_3:73150121-73150140 | Msa0661680:CDS | 20.0% |
| !! | GTATGTACTGTTATATTTAT+TGG | - | chr4_3:73150337-73150356 | Msa0661680:intron | 20.0% |
| !! | ACTAAAATAGTTGGATTTAA+AGG | + | chr4_3:73150982-73151001 | None:intergenic | 20.0% |
| ! | TGAAATGAAAATCAATCCAA+TGG | + | chr4_3:73149218-73149237 | None:intergenic | 25.0% |
| !! | GAATTTCAATTTCCTTTTAC+GGG | - | chr4_3:73149247-73149266 | Msa0661680:three_prime_UTR | 25.0% |
| ! | GCAAAAAATCGAGTAAATTA+GGG | - | chr4_3:73149591-73149610 | Msa0661680:intron | 25.0% |
| !! | AACTAGCATAATTTCTCTTT+TGG | - | chr4_3:73149652-73149671 | Msa0661680:CDS | 25.0% |
| !!! | ATATTGTTGATTTTGATGGT+AGG | - | chr4_3:73149702-73149721 | Msa0661680:CDS | 25.0% |
| ! | AAATTTGTGTGGTCTTTATA+GGG | - | chr4_3:73150132-73150151 | Msa0661680:CDS | 25.0% |
| ! | TGTTGTAAGTAAATGCAAAT+TGG | - | chr4_3:73150524-73150543 | Msa0661680:CDS | 25.0% |
| ! | GTTGTAAGTAAATGCAAATT+GGG | - | chr4_3:73150525-73150544 | Msa0661680:CDS | 25.0% |
| ! | ATTTATTTGTGATTGTTGTC+AGG | - | chr4_3:73150565-73150584 | Msa0661680:CDS | 25.0% |
| ! | TTTGTTGAATTTCACTTTGT+AGG | - | chr4_3:73150707-73150726 | Msa0661680:intron | 25.0% |
| ! | GATGATGATAACATTTATGT+AGG | - | chr4_3:73150803-73150822 | Msa0661680:CDS | 25.0% |
| !!! | ATCCAACTATTTTAGTTAAG+AGG | - | chr4_3:73150986-73151005 | Msa0661680:five_prime_UTR | 25.0% |
| ! | TGAAATGAAAATCAATCCAA+TGG | + | chr4_3:73149218-73149237 | None:intergenic | 25.0% |
| !! | GAATTTCAATTTCCTTTTAC+GGG | - | chr4_3:73149247-73149266 | Msa0661680:three_prime_UTR | 25.0% |
| ! | GCAAAAAATCGAGTAAATTA+GGG | - | chr4_3:73149591-73149610 | Msa0661680:intron | 25.0% |
| !! | AACTAGCATAATTTCTCTTT+TGG | - | chr4_3:73149652-73149671 | Msa0661680:CDS | 25.0% |
| !!! | ATATTGTTGATTTTGATGGT+AGG | - | chr4_3:73149702-73149721 | Msa0661680:CDS | 25.0% |
| ! | AAATTTGTGTGGTCTTTATA+GGG | - | chr4_3:73150132-73150151 | Msa0661680:CDS | 25.0% |
| ! | TGTTGTAAGTAAATGCAAAT+TGG | - | chr4_3:73150524-73150543 | Msa0661680:CDS | 25.0% |
| ! | GTTGTAAGTAAATGCAAATT+GGG | - | chr4_3:73150525-73150544 | Msa0661680:CDS | 25.0% |
| ! | ATTTATTTGTGATTGTTGTC+AGG | - | chr4_3:73150565-73150584 | Msa0661680:CDS | 25.0% |
| ! | TTTGTTGAATTTCACTTTGT+AGG | - | chr4_3:73150707-73150726 | Msa0661680:intron | 25.0% |
| ! | GATGATGATAACATTTATGT+AGG | - | chr4_3:73150803-73150822 | Msa0661680:CDS | 25.0% |
| !!! | ATCCAACTATTTTAGTTAAG+AGG | - | chr4_3:73150986-73151005 | Msa0661680:five_prime_UTR | 25.0% |
| TGAAAATCAATCCAATGGTA+GGG | + | chr4_3:73149213-73149232 | None:intergenic | 30.0% | |
| ATGAAAATCAATCCAATGGT+AGG | + | chr4_3:73149214-73149233 | None:intergenic | 30.0% | |
| AGCGAATAAAACGATTTAAG+AGG | + | chr4_3:73149562-73149581 | None:intergenic | 30.0% | |
| GGCAAAAAATCGAGTAAATT+AGG | - | chr4_3:73149590-73149609 | Msa0661680:intron | 30.0% | |
| ATAAAAATGTCAAAGTCCCA+CGG | + | chr4_3:73150085-73150104 | None:intergenic | 30.0% | |
| GAAATTTGTGTGGTCTTTAT+AGG | - | chr4_3:73150131-73150150 | Msa0661680:CDS | 30.0% | |
| TGCTTATTACATGCGATATA+AGG | + | chr4_3:73150240-73150259 | None:intergenic | 30.0% | |
| ! | CATCTGTATATGAATTTTGC+AGG | - | chr4_3:73150270-73150289 | Msa0661680:intron | 30.0% |
| ! | TGTATATGAATTTTGCAGGT+GGG | - | chr4_3:73150274-73150293 | Msa0661680:intron | 30.0% |
| AGAATATGAGAAAACCATGA+AGG | - | chr4_3:73150467-73150486 | Msa0661680:intron | 30.0% | |
| ! | TTTCTTGTTATATGCCTTCA+TGG | + | chr4_3:73150484-73150503 | None:intergenic | 30.0% |
| TAAATGCAAATTGGGTAACT+AGG | - | chr4_3:73150533-73150552 | Msa0661680:CDS | 30.0% | |
| GATAAACATGTCTTACTTCT+AGG | - | chr4_3:73150874-73150893 | Msa0661680:intron | 30.0% | |
| GAAAAGACAACATTTACCAA+GGG | + | chr4_3:73150914-73150933 | None:intergenic | 30.0% | |
| TGAAAAGACAACATTTACCA+AGG | + | chr4_3:73150915-73150934 | None:intergenic | 30.0% | |
| ! | GGATTTAAAGGTACAGATAA+AGG | + | chr4_3:73150970-73150989 | None:intergenic | 30.0% |
| CACCTCTTAACTAAAATAGT+TGG | + | chr4_3:73150991-73151010 | None:intergenic | 30.0% | |
| TGAAAATCAATCCAATGGTA+GGG | + | chr4_3:73149213-73149232 | None:intergenic | 30.0% | |
| ATGAAAATCAATCCAATGGT+AGG | + | chr4_3:73149214-73149233 | None:intergenic | 30.0% | |
| AGCGAATAAAACGATTTAAG+AGG | + | chr4_3:73149562-73149581 | None:intergenic | 30.0% | |
| GGCAAAAAATCGAGTAAATT+AGG | - | chr4_3:73149590-73149609 | Msa0661680:intron | 30.0% | |
| ATAAAAATGTCAAAGTCCCA+CGG | + | chr4_3:73150085-73150104 | None:intergenic | 30.0% | |
| GAAATTTGTGTGGTCTTTAT+AGG | - | chr4_3:73150131-73150150 | Msa0661680:CDS | 30.0% | |
| TGCTTATTACATGCGATATA+AGG | + | chr4_3:73150240-73150259 | None:intergenic | 30.0% | |
| ! | CATCTGTATATGAATTTTGC+AGG | - | chr4_3:73150270-73150289 | Msa0661680:intron | 30.0% |
| ! | TGTATATGAATTTTGCAGGT+GGG | - | chr4_3:73150274-73150293 | Msa0661680:intron | 30.0% |
| AGAATATGAGAAAACCATGA+AGG | - | chr4_3:73150467-73150486 | Msa0661680:intron | 30.0% | |
| ! | TTTCTTGTTATATGCCTTCA+TGG | + | chr4_3:73150484-73150503 | None:intergenic | 30.0% |
| TAAATGCAAATTGGGTAACT+AGG | - | chr4_3:73150533-73150552 | Msa0661680:CDS | 30.0% | |
| GATAAACATGTCTTACTTCT+AGG | - | chr4_3:73150874-73150893 | Msa0661680:intron | 30.0% | |
| GAAAAGACAACATTTACCAA+GGG | + | chr4_3:73150914-73150933 | None:intergenic | 30.0% | |
| TGAAAAGACAACATTTACCA+AGG | + | chr4_3:73150915-73150934 | None:intergenic | 30.0% | |
| ! | GGATTTAAAGGTACAGATAA+AGG | + | chr4_3:73150970-73150989 | None:intergenic | 30.0% |
| CACCTCTTAACTAAAATAGT+TGG | + | chr4_3:73150991-73151010 | None:intergenic | 30.0% | |
| GTAGATATTAAGCCCGTAAA+AGG | + | chr4_3:73149262-73149281 | None:intergenic | 35.0% | |
| GAAAATTGAGCGAAATTGAG+AGG | + | chr4_3:73149402-73149421 | None:intergenic | 35.0% | |
| ! | ACTGCAGTTTTCATCATGAA+AGG | - | chr4_3:73149469-73149488 | Msa0661680:three_prime_UTR | 35.0% |
| GGATTGAACTTACTTAGCAT+CGG | + | chr4_3:73149524-73149543 | None:intergenic | 35.0% | |
| !! | CGTTTTATTCGCTTTCGATT+TGG | - | chr4_3:73149569-73149588 | Msa0661680:intron | 35.0% |
| !! | ATGAAAACGAAGAAAGCACT+TGG | + | chr4_3:73149824-73149843 | None:intergenic | 35.0% |
| ! | CAGTCATAACTGTTTTCACA+CGG | + | chr4_3:73150048-73150067 | None:intergenic | 35.0% |
| ! | GTCTTTATAGGGAGGATTTT+AGG | - | chr4_3:73150143-73150162 | Msa0661680:CDS | 35.0% |
| !! | TTTTAGGAAGCAGTTCAAGA+AGG | - | chr4_3:73150159-73150178 | Msa0661680:intron | 35.0% |
| !!! | AGTATCCGTTGTTGTTTTAC+TGG | - | chr4_3:73150214-73150233 | Msa0661680:intron | 35.0% |
| TAAGGCCAGTAAAACAACAA+CGG | + | chr4_3:73150222-73150241 | None:intergenic | 35.0% | |
| ! | CTGTATATGAATTTTGCAGG+TGG | - | chr4_3:73150273-73150292 | Msa0661680:intron | 35.0% |
| CGTTCAATCACAGCATATAA+TGG | + | chr4_3:73150385-73150404 | None:intergenic | 35.0% | |
| ATATGCTGTGATTGAACGTT+TGG | - | chr4_3:73150387-73150406 | Msa0661680:intron | 35.0% | |
| GTTTGGTCTCTGGATTTATT+AGG | - | chr4_3:73150404-73150423 | Msa0661680:intron | 35.0% | |
| ! | GAAGGCATATAACAAGAAAC+AGG | - | chr4_3:73150485-73150504 | Msa0661680:CDS | 35.0% |
| GCATATAACAAGAAACAGGT+CGG | - | chr4_3:73150489-73150508 | Msa0661680:CDS | 35.0% | |
| TTGTTCCTTATGTTTCATGC+AGG | - | chr4_3:73150756-73150775 | Msa0661680:intron | 35.0% | |
| ACGTGAATAGCTAAAATACG+AGG | - | chr4_3:73150937-73150956 | Msa0661680:five_prime_UTR | 35.0% | |
| CGTGAATAGCTAAAATACGA+GGG | - | chr4_3:73150938-73150957 | Msa0661680:five_prime_UTR | 35.0% | |
| !!! | AGAGCTTTTAGTTTCTCTTG+TGG | - | chr4_3:73151023-73151042 | Msa0661680:five_prime_UTR | 35.0% |
| GATATATGCAAACGATGATG+CGG | + | chr4_3:73151101-73151120 | None:intergenic | 35.0% | |
| GTAGATATTAAGCCCGTAAA+AGG | + | chr4_3:73149262-73149281 | None:intergenic | 35.0% | |
| GAAAATTGAGCGAAATTGAG+AGG | + | chr4_3:73149402-73149421 | None:intergenic | 35.0% | |
| ! | ACTGCAGTTTTCATCATGAA+AGG | - | chr4_3:73149469-73149488 | Msa0661680:three_prime_UTR | 35.0% |
| GGATTGAACTTACTTAGCAT+CGG | + | chr4_3:73149524-73149543 | None:intergenic | 35.0% | |
| !! | CGTTTTATTCGCTTTCGATT+TGG | - | chr4_3:73149569-73149588 | Msa0661680:intron | 35.0% |
| !! | ATGAAAACGAAGAAAGCACT+TGG | + | chr4_3:73149824-73149843 | None:intergenic | 35.0% |
| ! | CAGTCATAACTGTTTTCACA+CGG | + | chr4_3:73150048-73150067 | None:intergenic | 35.0% |
| ! | GTCTTTATAGGGAGGATTTT+AGG | - | chr4_3:73150143-73150162 | Msa0661680:CDS | 35.0% |
| !! | TTTTAGGAAGCAGTTCAAGA+AGG | - | chr4_3:73150159-73150178 | Msa0661680:intron | 35.0% |
| !!! | AGTATCCGTTGTTGTTTTAC+TGG | - | chr4_3:73150214-73150233 | Msa0661680:intron | 35.0% |
| TAAGGCCAGTAAAACAACAA+CGG | + | chr4_3:73150222-73150241 | None:intergenic | 35.0% | |
| ! | CTGTATATGAATTTTGCAGG+TGG | - | chr4_3:73150273-73150292 | Msa0661680:intron | 35.0% |
| CGTTCAATCACAGCATATAA+TGG | + | chr4_3:73150385-73150404 | None:intergenic | 35.0% | |
| ATATGCTGTGATTGAACGTT+TGG | - | chr4_3:73150387-73150406 | Msa0661680:intron | 35.0% | |
| GTTTGGTCTCTGGATTTATT+AGG | - | chr4_3:73150404-73150423 | Msa0661680:intron | 35.0% | |
| ! | GAAGGCATATAACAAGAAAC+AGG | - | chr4_3:73150485-73150504 | Msa0661680:CDS | 35.0% |
| GCATATAACAAGAAACAGGT+CGG | - | chr4_3:73150489-73150508 | Msa0661680:CDS | 35.0% | |
| TTGTTCCTTATGTTTCATGC+AGG | - | chr4_3:73150756-73150775 | Msa0661680:intron | 35.0% | |
| ACGTGAATAGCTAAAATACG+AGG | - | chr4_3:73150937-73150956 | Msa0661680:five_prime_UTR | 35.0% | |
| CGTGAATAGCTAAAATACGA+GGG | - | chr4_3:73150938-73150957 | Msa0661680:five_prime_UTR | 35.0% | |
| !!! | AGAGCTTTTAGTTTCTCTTG+TGG | - | chr4_3:73151023-73151042 | Msa0661680:five_prime_UTR | 35.0% |
| GATATATGCAAACGATGATG+CGG | + | chr4_3:73151101-73151120 | None:intergenic | 35.0% | |
| CAATCCAATGGTAGGGATTT+AGG | + | chr4_3:73149206-73149225 | None:intergenic | 40.0% | |
| ACTAGGGTAAGGATCAAATG+CGG | + | chr4_3:73149285-73149304 | None:intergenic | 40.0% | |
| TGTATACGAGAGACACACTA+GGG | + | chr4_3:73149301-73149320 | None:intergenic | 40.0% | |
| TTGTATACGAGAGACACACT+AGG | + | chr4_3:73149302-73149321 | None:intergenic | 40.0% | |
| !!! | GCGTTAGTTTTTACAGCGAA+AGG | + | chr4_3:73149440-73149459 | None:intergenic | 40.0% |
| !! | TTACTTAGCATCGGCTTTCT+TGG | + | chr4_3:73149515-73149534 | None:intergenic | 40.0% |
| ! | CGATTTTCAGATCTCAGATC+TGG | + | chr4_3:73149628-73149647 | None:intergenic | 40.0% |
| !! | AAAACGAAGAAAGCACTTGG+AGG | + | chr4_3:73149821-73149840 | None:intergenic | 40.0% |
| ! | GTTTTCACACGGTATAAGAC+AGG | + | chr4_3:73150037-73150056 | None:intergenic | 40.0% |
| TTTGTGTGGTCTTTATAGGG+AGG | - | chr4_3:73150135-73150154 | Msa0661680:CDS | 40.0% | |
| !! | TTCTCTGCTTTTGCTGCATA+TGG | + | chr4_3:73150438-73150457 | None:intergenic | 40.0% |
| ATGCAGCAAAAGCAGAGAAA+AGG | - | chr4_3:73150439-73150458 | Msa0661680:intron | 40.0% | |
| AGCAAAAGCAGAGAAAAGGA+AGG | - | chr4_3:73150443-73150462 | Msa0661680:intron | 40.0% | |
| CTGTTGAGGAAGAAGAATCT+GGG | - | chr4_3:73150603-73150622 | Msa0661680:intron | 40.0% | |
| TGAAGTGCATGATGAGAATG+AGG | - | chr4_3:73150637-73150656 | Msa0661680:intron | 40.0% | |
| ! | TGAGAATGAGGATGATGATG+AGG | - | chr4_3:73150649-73150668 | Msa0661680:intron | 40.0% |
| ! | AATGAGGATGATGATGAGGA+TGG | - | chr4_3:73150653-73150672 | Msa0661680:intron | 40.0% |
| TTCCTTATGTTTCATGCAGG+AGG | - | chr4_3:73150759-73150778 | Msa0661680:intron | 40.0% | |
| GAGGATGACGAATAGAAACT+TGG | - | chr4_3:73150781-73150800 | Msa0661680:intron | 40.0% | |
| CAATCCAATGGTAGGGATTT+AGG | + | chr4_3:73149206-73149225 | None:intergenic | 40.0% | |
| ACTAGGGTAAGGATCAAATG+CGG | + | chr4_3:73149285-73149304 | None:intergenic | 40.0% | |
| TGTATACGAGAGACACACTA+GGG | + | chr4_3:73149301-73149320 | None:intergenic | 40.0% | |
| TTGTATACGAGAGACACACT+AGG | + | chr4_3:73149302-73149321 | None:intergenic | 40.0% | |
| !!! | GCGTTAGTTTTTACAGCGAA+AGG | + | chr4_3:73149440-73149459 | None:intergenic | 40.0% |
| !! | TTACTTAGCATCGGCTTTCT+TGG | + | chr4_3:73149515-73149534 | None:intergenic | 40.0% |
| ! | CGATTTTCAGATCTCAGATC+TGG | + | chr4_3:73149628-73149647 | None:intergenic | 40.0% |
| !! | AAAACGAAGAAAGCACTTGG+AGG | + | chr4_3:73149821-73149840 | None:intergenic | 40.0% |
| ! | GTTTTCACACGGTATAAGAC+AGG | + | chr4_3:73150037-73150056 | None:intergenic | 40.0% |
| TTTGTGTGGTCTTTATAGGG+AGG | - | chr4_3:73150135-73150154 | Msa0661680:CDS | 40.0% | |
| !! | TTCTCTGCTTTTGCTGCATA+TGG | + | chr4_3:73150438-73150457 | None:intergenic | 40.0% |
| ATGCAGCAAAAGCAGAGAAA+AGG | - | chr4_3:73150439-73150458 | Msa0661680:intron | 40.0% | |
| AGCAAAAGCAGAGAAAAGGA+AGG | - | chr4_3:73150443-73150462 | Msa0661680:intron | 40.0% | |
| CTGTTGAGGAAGAAGAATCT+GGG | - | chr4_3:73150603-73150622 | Msa0661680:intron | 40.0% | |
| TGAAGTGCATGATGAGAATG+AGG | - | chr4_3:73150637-73150656 | Msa0661680:intron | 40.0% | |
| ! | TGAGAATGAGGATGATGATG+AGG | - | chr4_3:73150649-73150668 | Msa0661680:intron | 40.0% |
| ! | AATGAGGATGATGATGAGGA+TGG | - | chr4_3:73150653-73150672 | Msa0661680:intron | 40.0% |
| TTCCTTATGTTTCATGCAGG+AGG | - | chr4_3:73150759-73150778 | Msa0661680:intron | 40.0% | |
| GAGGATGACGAATAGAAACT+TGG | - | chr4_3:73150781-73150800 | Msa0661680:intron | 40.0% | |
| TCCAATGGTAGGGATTTAGG+CGG | + | chr4_3:73149203-73149222 | None:intergenic | 45.0% | |
| CTAGGGTAAGGATCAAATGC+GGG | + | chr4_3:73149284-73149303 | None:intergenic | 45.0% | |
| TGGAATGGGGTTGGAAACTA+GGG | + | chr4_3:73149364-73149383 | None:intergenic | 45.0% | |
| TTGAGAGGAAACGTACCGAA+CGG | + | chr4_3:73149387-73149406 | None:intergenic | 45.0% | |
| ATGAAAGGAGCCAAGTCCAA+GGG | - | chr4_3:73149484-73149503 | Msa0661680:three_prime_UTR | 45.0% | |
| TAGGCTTGCCGTGAATAAGA+AGG | - | chr4_3:73149721-73149740 | Msa0661680:intron | 45.0% | |
| AGGCTTGCCGTGAATAAGAA+GGG | - | chr4_3:73149722-73149741 | Msa0661680:intron | 45.0% | |
| !! | TTAGGCTTGTTAGGGTCCTT+TGG | + | chr4_3:73149794-73149813 | None:intergenic | 45.0% |
| !! | GAGGTCTCTTAGGCTTGTTA+GGG | + | chr4_3:73149802-73149821 | None:intergenic | 45.0% |
| ! | AAAGCACTTGGAGGTCTCTT+AGG | + | chr4_3:73149812-73149831 | None:intergenic | 45.0% |
| TGCTGAGTTATGATGACCGT+GGG | - | chr4_3:73150066-73150085 | Msa0661680:intron | 45.0% | |
| !! | CAGACACAGCTTTGTTGTCA+GGG | + | chr4_3:73150189-73150208 | None:intergenic | 45.0% |
| GTGATTGAACGTTTGGTCTC+TGG | - | chr4_3:73150394-73150413 | Msa0661680:intron | 45.0% | |
| TGTGATTGTTGTCAGGCTGA+AGG | - | chr4_3:73150572-73150591 | Msa0661680:CDS | 45.0% | |
| GCTGTTGAGGAAGAAGAATC+TGG | - | chr4_3:73150602-73150621 | Msa0661680:intron | 45.0% | |
| CTCCTCCTGCATGAAACATA+AGG | + | chr4_3:73150764-73150783 | None:intergenic | 45.0% | |
| CTTATGTTTCATGCAGGAGG+AGG | - | chr4_3:73150762-73150781 | Msa0661680:intron | 45.0% | |
| ! | GGAATATTTTGCTGCTCCCT+TGG | - | chr4_3:73150895-73150914 | Msa0661680:intron | 45.0% |
| TCCAATGGTAGGGATTTAGG+CGG | + | chr4_3:73149203-73149222 | None:intergenic | 45.0% | |
| CTAGGGTAAGGATCAAATGC+GGG | + | chr4_3:73149284-73149303 | None:intergenic | 45.0% | |
| TGGAATGGGGTTGGAAACTA+GGG | + | chr4_3:73149364-73149383 | None:intergenic | 45.0% | |
| TTGAGAGGAAACGTACCGAA+CGG | + | chr4_3:73149387-73149406 | None:intergenic | 45.0% | |
| ATGAAAGGAGCCAAGTCCAA+GGG | - | chr4_3:73149484-73149503 | Msa0661680:three_prime_UTR | 45.0% | |
| TAGGCTTGCCGTGAATAAGA+AGG | - | chr4_3:73149721-73149740 | Msa0661680:intron | 45.0% | |
| AGGCTTGCCGTGAATAAGAA+GGG | - | chr4_3:73149722-73149741 | Msa0661680:intron | 45.0% | |
| !! | TTAGGCTTGTTAGGGTCCTT+TGG | + | chr4_3:73149794-73149813 | None:intergenic | 45.0% |
| !! | GAGGTCTCTTAGGCTTGTTA+GGG | + | chr4_3:73149802-73149821 | None:intergenic | 45.0% |
| ! | AAAGCACTTGGAGGTCTCTT+AGG | + | chr4_3:73149812-73149831 | None:intergenic | 45.0% |
| TGCTGAGTTATGATGACCGT+GGG | - | chr4_3:73150066-73150085 | Msa0661680:intron | 45.0% | |
| !! | CAGACACAGCTTTGTTGTCA+GGG | + | chr4_3:73150189-73150208 | None:intergenic | 45.0% |
| GTGATTGAACGTTTGGTCTC+TGG | - | chr4_3:73150394-73150413 | Msa0661680:intron | 45.0% | |
| TGTGATTGTTGTCAGGCTGA+AGG | - | chr4_3:73150572-73150591 | Msa0661680:CDS | 45.0% | |
| GCTGTTGAGGAAGAAGAATC+TGG | - | chr4_3:73150602-73150621 | Msa0661680:intron | 45.0% | |
| CTCCTCCTGCATGAAACATA+AGG | + | chr4_3:73150764-73150783 | None:intergenic | 45.0% | |
| CTTATGTTTCATGCAGGAGG+AGG | - | chr4_3:73150762-73150781 | Msa0661680:intron | 45.0% | |
| ! | GGAATATTTTGCTGCTCCCT+TGG | - | chr4_3:73150895-73150914 | Msa0661680:intron | 45.0% |
| CCAATGGTAGGGATTTAGGC+GGG | + | chr4_3:73149202-73149221 | None:intergenic | 50.0% | |
| ACGAGAGACACACTAGGGTA+AGG | + | chr4_3:73149296-73149315 | None:intergenic | 50.0% | |
| GGAGAGAGAGAGAGAGTTTG+TGG | + | chr4_3:73149335-73149354 | None:intergenic | 50.0% | |
| GGTTGGAAACTAGGGTTTGG+GGG | + | chr4_3:73149356-73149375 | None:intergenic | 50.0% | |
| GGGTTGGAAACTAGGGTTTG+GGG | + | chr4_3:73149357-73149376 | None:intergenic | 50.0% | |
| GGGGTTGGAAACTAGGGTTT+GGG | + | chr4_3:73149358-73149377 | None:intergenic | 50.0% | |
| TGGGGTTGGAAACTAGGGTT+TGG | + | chr4_3:73149359-73149378 | None:intergenic | 50.0% | |
| GTGGAATGGGGTTGGAAACT+AGG | + | chr4_3:73149365-73149384 | None:intergenic | 50.0% | |
| AACGTACCGAACGGTGGAAT+GGG | + | chr4_3:73149378-73149397 | None:intergenic | 50.0% | |
| AAACGTACCGAACGGTGGAA+TGG | + | chr4_3:73149379-73149398 | None:intergenic | 50.0% | |
| CATGAAAGGAGCCAAGTCCA+AGG | - | chr4_3:73149483-73149502 | Msa0661680:three_prime_UTR | 50.0% | |
| CTTGGATTCACCCTTGGACT+TGG | + | chr4_3:73149497-73149516 | None:intergenic | 50.0% | |
| GGCTTTCTTGGATTCACCCT+TGG | + | chr4_3:73149503-73149522 | None:intergenic | 50.0% | |
| AAGGAAACCAGCCAAGGGAA+AGG | - | chr4_3:73149766-73149785 | Msa0661680:intron | 50.0% | |
| ! | TTTGGTTCCTTTCCCTTGGC+TGG | + | chr4_3:73149776-73149795 | None:intergenic | 50.0% |
| AGCCAAGGGAAAGGAACCAA+AGG | - | chr4_3:73149775-73149794 | Msa0661680:intron | 50.0% | |
| ! | GTCCTTTGGTTCCTTTCCCT+TGG | + | chr4_3:73149780-73149799 | None:intergenic | 50.0% |
| ! | GGAGGTCTCTTAGGCTTGTT+AGG | + | chr4_3:73149803-73149822 | None:intergenic | 50.0% |
| CTGCTGAGTTATGATGACCG+TGG | - | chr4_3:73150065-73150084 | Msa0661680:intron | 50.0% | |
| !! | GCAGACACAGCTTTGTTGTC+AGG | + | chr4_3:73150190-73150209 | None:intergenic | 50.0% |
| GCAAAGCTGCTGGAGCAAAA+TGG | - | chr4_3:73150296-73150315 | Msa0661680:intron | 50.0% | |
| TCTTCTTCCTCAACAGCAGC+TGG | + | chr4_3:73150599-73150618 | None:intergenic | 50.0% | |
| TGATGAGGATGGCAGTGAAG+AGG | - | chr4_3:73150664-73150683 | Msa0661680:intron | 50.0% | |
| AAACGATGATGCGGCAGGAT+AGG | + | chr4_3:73151092-73151111 | None:intergenic | 50.0% | |
| TATGCAAACGATGATGCGGC+AGG | + | chr4_3:73151097-73151116 | None:intergenic | 50.0% | |
| CCAATGGTAGGGATTTAGGC+GGG | + | chr4_3:73149202-73149221 | None:intergenic | 50.0% | |
| ACGAGAGACACACTAGGGTA+AGG | + | chr4_3:73149296-73149315 | None:intergenic | 50.0% | |
| GGAGAGAGAGAGAGAGTTTG+TGG | + | chr4_3:73149335-73149354 | None:intergenic | 50.0% | |
| GGTTGGAAACTAGGGTTTGG+GGG | + | chr4_3:73149356-73149375 | None:intergenic | 50.0% | |
| GGGTTGGAAACTAGGGTTTG+GGG | + | chr4_3:73149357-73149376 | None:intergenic | 50.0% | |
| GGGGTTGGAAACTAGGGTTT+GGG | + | chr4_3:73149358-73149377 | None:intergenic | 50.0% | |
| TGGGGTTGGAAACTAGGGTT+TGG | + | chr4_3:73149359-73149378 | None:intergenic | 50.0% | |
| GTGGAATGGGGTTGGAAACT+AGG | + | chr4_3:73149365-73149384 | None:intergenic | 50.0% | |
| AACGTACCGAACGGTGGAAT+GGG | + | chr4_3:73149378-73149397 | None:intergenic | 50.0% | |
| AAACGTACCGAACGGTGGAA+TGG | + | chr4_3:73149379-73149398 | None:intergenic | 50.0% | |
| CATGAAAGGAGCCAAGTCCA+AGG | - | chr4_3:73149483-73149502 | Msa0661680:three_prime_UTR | 50.0% | |
| CTTGGATTCACCCTTGGACT+TGG | + | chr4_3:73149497-73149516 | None:intergenic | 50.0% | |
| GGCTTTCTTGGATTCACCCT+TGG | + | chr4_3:73149503-73149522 | None:intergenic | 50.0% | |
| AAGGAAACCAGCCAAGGGAA+AGG | - | chr4_3:73149766-73149785 | Msa0661680:intron | 50.0% | |
| ! | TTTGGTTCCTTTCCCTTGGC+TGG | + | chr4_3:73149776-73149795 | None:intergenic | 50.0% |
| AGCCAAGGGAAAGGAACCAA+AGG | - | chr4_3:73149775-73149794 | Msa0661680:intron | 50.0% | |
| ! | GTCCTTTGGTTCCTTTCCCT+TGG | + | chr4_3:73149780-73149799 | None:intergenic | 50.0% |
| ! | GGAGGTCTCTTAGGCTTGTT+AGG | + | chr4_3:73149803-73149822 | None:intergenic | 50.0% |
| CTGCTGAGTTATGATGACCG+TGG | - | chr4_3:73150065-73150084 | Msa0661680:intron | 50.0% | |
| !! | GCAGACACAGCTTTGTTGTC+AGG | + | chr4_3:73150190-73150209 | None:intergenic | 50.0% |
| GCAAAGCTGCTGGAGCAAAA+TGG | - | chr4_3:73150296-73150315 | Msa0661680:intron | 50.0% | |
| TCTTCTTCCTCAACAGCAGC+TGG | + | chr4_3:73150599-73150618 | None:intergenic | 50.0% | |
| TGATGAGGATGGCAGTGAAG+AGG | - | chr4_3:73150664-73150683 | Msa0661680:intron | 50.0% | |
| AAACGATGATGCGGCAGGAT+AGG | + | chr4_3:73151092-73151111 | None:intergenic | 50.0% | |
| TATGCAAACGATGATGCGGC+AGG | + | chr4_3:73151097-73151116 | None:intergenic | 50.0% | |
| CCCGCCTAAATCCCTACCAT+TGG | - | chr4_3:73149199-73149218 | Msa0661680:three_prime_UTR | 55.0% | |
| TCCAACCCCATTCCACCGTT+CGG | - | chr4_3:73149369-73149388 | Msa0661680:three_prime_UTR | 55.0% | |
| ACGTACCGAACGGTGGAATG+GGG | + | chr4_3:73149377-73149396 | None:intergenic | 55.0% | |
| AGAGGAAACGTACCGAACGG+TGG | + | chr4_3:73149384-73149403 | None:intergenic | 55.0% | |
| TTTCCTTCCGCCCTTGGTAG+TGG | + | chr4_3:73149753-73149772 | None:intergenic | 55.0% | |
| TGAAGGTCCAGCTGCTGTTG+AGG | - | chr4_3:73150589-73150608 | Msa0661680:intron | 55.0% | |
| CCCGCCTAAATCCCTACCAT+TGG | - | chr4_3:73149199-73149218 | Msa0661680:three_prime_UTR | 55.0% | |
| TCCAACCCCATTCCACCGTT+CGG | - | chr4_3:73149369-73149388 | Msa0661680:three_prime_UTR | 55.0% | |
| ACGTACCGAACGGTGGAATG+GGG | + | chr4_3:73149377-73149396 | None:intergenic | 55.0% | |
| AGAGGAAACGTACCGAACGG+TGG | + | chr4_3:73149384-73149403 | None:intergenic | 55.0% | |
| TTTCCTTCCGCCCTTGGTAG+TGG | + | chr4_3:73149753-73149772 | None:intergenic | 55.0% | |
| TGAAGGTCCAGCTGCTGTTG+AGG | - | chr4_3:73150589-73150608 | Msa0661680:intron | 55.0% | |
| ACCGAACGGTGGAATGGGGT+TGG | + | chr4_3:73149373-73149392 | None:intergenic | 60.0% | |
| GGCGGCGCCCTTCTTATTCA+CGG | + | chr4_3:73149732-73149751 | None:intergenic | 60.0% | |
| GGCGGAAGGAAACCAGCCAA+GGG | - | chr4_3:73149761-73149780 | Msa0661680:intron | 60.0% | |
| TTGCAGGTGGGCAAAGCTGC+TGG | - | chr4_3:73150286-73150305 | Msa0661680:intron | 60.0% | |
| ACCGAACGGTGGAATGGGGT+TGG | + | chr4_3:73149373-73149392 | None:intergenic | 60.0% | |
| GGCGGCGCCCTTCTTATTCA+CGG | + | chr4_3:73149732-73149751 | None:intergenic | 60.0% | |
| GGCGGAAGGAAACCAGCCAA+GGG | - | chr4_3:73149761-73149780 | Msa0661680:intron | 60.0% | |
| TTGCAGGTGGGCAAAGCTGC+TGG | - | chr4_3:73150286-73150305 | Msa0661680:intron | 60.0% | |
| !! | AAGGGCGCCGCCACTACCAA+GGG | - | chr4_3:73149740-73149759 | Msa0661680:intron | 65.0% |
| !! | CCTTCCGCCCTTGGTAGTGG+CGG | + | chr4_3:73149750-73149769 | None:intergenic | 65.0% |
| !! | GGCTGGTTTCCTTCCGCCCT+TGG | + | chr4_3:73149759-73149778 | None:intergenic | 65.0% |
| GGGCGGAAGGAAACCAGCCA+AGG | - | chr4_3:73149760-73149779 | Msa0661680:intron | 65.0% | |
| !! | AAGGGCGCCGCCACTACCAA+GGG | - | chr4_3:73149740-73149759 | Msa0661680:intron | 65.0% |
| !! | CCTTCCGCCCTTGGTAGTGG+CGG | + | chr4_3:73149750-73149769 | None:intergenic | 65.0% |
| !! | GGCTGGTTTCCTTCCGCCCT+TGG | + | chr4_3:73149759-73149778 | None:intergenic | 65.0% |
| GGGCGGAAGGAAACCAGCCA+AGG | - | chr4_3:73149760-73149779 | Msa0661680:intron | 65.0% | |
| !! | GAAGGGCGCCGCCACTACCA+AGG | - | chr4_3:73149739-73149758 | Msa0661680:intron | 70.0% |
| CCGCCACTACCAAGGGCGGA+AGG | - | chr4_3:73149747-73149766 | Msa0661680:intron | 70.0% | |
| !! | GAAGGGCGCCGCCACTACCA+AGG | - | chr4_3:73149739-73149758 | Msa0661680:intron | 70.0% |
| CCGCCACTACCAAGGGCGGA+AGG | - | chr4_3:73149747-73149766 | Msa0661680:intron | 70.0% | |
| GGCGCCGCCACTACCAAGGG+CGG | - | chr4_3:73149743-73149762 | Msa0661680:intron | 75.0% | |
| GGCGCCGCCACTACCAAGGG+CGG | - | chr4_3:73149743-73149762 | Msa0661680:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 73149193 | 73151129 | 73149193 | ID=Msa0661680;Name=Msa0661680 |
| chr4_3 | mRNA | 73149193 | 73151129 | 73149193 | ID=Msa0661680-mRNA-1;Parent=Msa0661680;Name=Msa0661680-mRNA-1;_AED=0.05;_eAED=0.05;_QI=206|1|1|1|0.85|0.75|8|334|155 |
| chr4_3 | exon | 73149193 | 73149544 | 73149193 | ID=Msa0661680-mRNA-1:exon:22064;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73149637 | 73149735 | 73149637 | ID=Msa0661680-mRNA-1:exon:22063;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73149816 | 73149896 | 73149816 | ID=Msa0661680-mRNA-1:exon:22062;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73149986 | 73150030 | 73149986 | ID=Msa0661680-mRNA-1:exon:22061;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73150112 | 73150169 | 73150112 | ID=Msa0661680-mRNA-1:exon:22060;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73150479 | 73150598 | 73150479 | ID=Msa0661680-mRNA-1:exon:22059;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73150792 | 73150846 | 73150792 | ID=Msa0661680-mRNA-1:exon:22058;Parent=Msa0661680-mRNA-1 |
| chr4_3 | exon | 73150932 | 73151129 | 73150932 | ID=Msa0661680-mRNA-1:exon:22057;Parent=Msa0661680-mRNA-1 |
| chr4_3 | five_prime_UTR | 73150932 | 73151129 | 73150932 | ID=Msa0661680-mRNA-1:five_prime_utr;Parent=Msa0661680-mRNA-1 |
| chr4_3 | five_prime_UTR | 73150839 | 73150846 | 73150839 | ID=Msa0661680-mRNA-1:five_prime_utr;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73150792 | 73150838 | 73150792 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73150479 | 73150598 | 73150479 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73150112 | 73150169 | 73150112 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73149986 | 73150030 | 73149986 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73149816 | 73149896 | 73149816 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73149637 | 73149735 | 73149637 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | CDS | 73149527 | 73149544 | 73149527 | ID=Msa0661680-mRNA-1:cds;Parent=Msa0661680-mRNA-1 |
| chr4_3 | three_prime_UTR | 73149193 | 73149526 | 73149193 | ID=Msa0661680-mRNA-1:three_prime_utr;Parent=Msa0661680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
