Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679110 | XP_013455625.1 | 98.587 | 566 | 8 | 0 | 1 | 566 | 12 | 577 | 0.0 | 1176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679110 | sp|P45456|ACEA1_SOYBN | 88.036 | 560 | 64 | 2 | 8 | 566 | 1 | 558 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679110 | A0A072UJP2 | 98.587 | 566 | 8 | 0 | 1 | 566 | 12 | 577 | 0.0 | 1176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0640230 | Msa0679110 | 0.934103 | 6.773255e-96 | -8.615850e-47 |
| Msa0679110 | Msa1200420 | 0.842161 | 3.061283e-58 | -8.615850e-47 |
| Msa0543780 | Msa0679110 | 0.922630 | 7.662596e-89 | -8.615850e-47 |
| Msa0599540 | Msa0679110 | 0.919957 | 2.347872e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679110 | MtrunA17_Chr4g0024191 | 98.587 | 566 | 8 | 0 | 1 | 566 | 12 | 577 | 0.0 | 1176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679110 | AT3G21720.1 | 77.385 | 566 | 127 | 1 | 1 | 566 | 12 | 576 | 0.0 | 954 |
Find 137 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGATCATCAGTTTATTT+TGG | 0.128571 | 4_4:+36573633 | Msa0679110:CDS |
| TCTCATCCTCGTTAACATTT+TGG | 0.176405 | 4_4:-36573819 | None:intergenic |
| TTTGTCGAACGCGGTGCTGC+TGG | 0.231397 | 4_4:+36573415 | Msa0679110:CDS |
| TGTTACTGAAGATCAATTTA+AGG | 0.237060 | 4_4:+36574748 | Msa0679110:CDS |
| ATGATCCCTTGTATCAATAT+TGG | 0.254265 | 4_4:-36573620 | None:intergenic |
| AAAGATGTAGTTTCTCTTAG+AGG | 0.272776 | 4_4:+36572968 | Msa0679110:CDS |
| CACCACACGCTGATCTTATC+TGG | 0.275848 | 4_4:+36574037 | Msa0679110:CDS |
| AGTATAGCTCTTTCACATTC+TGG | 0.278293 | 4_4:-36574837 | None:intergenic |
| CTATCAATGCCCACTGTTCC+TGG | 0.282019 | 4_4:-36574785 | None:intergenic |
| ATGGCACAAGGCTTTGCTTC+TGG | 0.282248 | 4_4:+36573700 | Msa0679110:CDS |
| TAAAACCCTTCTCTAGTTCT+AGG | 0.287639 | 4_4:-36573964 | None:intergenic |
| GGTCTCAAATAATCGATAAA+AGG | 0.302353 | 4_4:-36573328 | None:intergenic |
| TTGAGGCATAGGTTTGTCTT+AGG | 0.310375 | 4_4:-36572994 | None:intergenic |
| AAGGCTTCAATTTGATGTTA+TGG | 0.316260 | 4_4:+36573540 | Msa0679110:CDS |
| CGGTTAGTGAACATATTAAT+AGG | 0.324157 | 4_4:+36573506 | Msa0679110:CDS |
| AAAAGATGTTCAACTTTGTT+CGG | 0.327767 | 4_4:-36573229 | None:intergenic |
| CGCTACTTCGGACTCGAATC+TGG | 0.343144 | 4_4:-36572885 | None:intergenic |
| TAGGTGTGAGAAACCTCTTT+TGG | 0.344319 | 4_4:+36573929 | Msa0679110:CDS |
| TGTGTGCACTCAACCACATT+TGG | 0.352120 | 4_4:-36574075 | None:intergenic |
| AAAGATGTTCAACTTTGTTC+GGG | 0.357887 | 4_4:-36573228 | None:intergenic |
| AGGCTTCAATTTGATGTTAT+GGG | 0.358560 | 4_4:+36573541 | Msa0679110:CDS |
| TCACATGGCGGGGAAAGTTT+TGG | 0.363190 | 4_4:+36573480 | Msa0679110:CDS |
| ATTCCTAAGATCGCTCAGTT+AGG | 0.369228 | 4_4:+36574210 | Msa0679110:CDS |
| TGCTGTTCTGTTGGCTTGGT+GGG | 0.371779 | 4_4:-36573053 | None:intergenic |
| TACCCTAACTGAGCGATCTT+AGG | 0.383967 | 4_4:-36574213 | None:intergenic |
| AGGGAGATTTCTGAGAGATT+AGG | 0.384886 | 4_4:+36573910 | Msa0679110:CDS |
| AAAGAGTGGAGCTGAACTTC+AGG | 0.398181 | 4_4:+36573723 | Msa0679110:CDS |
| ATACACTTGCTCATCAGAAA+TGG | 0.399650 | 4_4:+36574373 | Msa0679110:CDS |
| TATGGGAGTTGAAACTGTTT+TGG | 0.403754 | 4_4:+36573558 | Msa0679110:CDS |
| TTGTCGAACGCGGTGCTGCT+GGG | 0.408084 | 4_4:+36573416 | Msa0679110:CDS |
| AAAGAGTTTGGCAACAGTTA+TGG | 0.409607 | 4_4:+36573681 | Msa0679110:CDS |
| GTGTCACCATCAGCTATTAT+CGG | 0.409854 | 4_4:-36573349 | None:intergenic |
| AACATTTGGTGCACTTGATC+CGG | 0.420743 | 4_4:+36573081 | Msa0679110:CDS |
| CACTCAAATGGCAAAACACT+TGG | 0.421562 | 4_4:+36573111 | Msa0679110:CDS |
| GTGGGCATTGATAGAGATAA+TGG | 0.425327 | 4_4:+36574794 | Msa0679110:CDS |
| CGAGAAATGTCTTTCAATTG+AGG | 0.440558 | 4_4:+36573882 | Msa0679110:CDS |
| TCGATGCTGTTCTGTTGGCT+TGG | 0.443029 | 4_4:-36573057 | None:intergenic |
| AGAACAGCATCGAGAACATT+TGG | 0.443937 | 4_4:+36573067 | Msa0679110:CDS |
| GAGTCTCAAGGGAAAGAGTT+TGG | 0.453937 | 4_4:+36573669 | Msa0679110:CDS |
| GCCATTTGAGTGACTTGGAC+CGG | 0.455747 | 4_4:-36573100 | None:intergenic |
| GGATAACTCATTTGAGGCAT+AGG | 0.457391 | 4_4:-36573005 | None:intergenic |
| TTCCTAAGATCGCTCAGTTA+GGG | 0.462132 | 4_4:+36574211 | Msa0679110:CDS |
| TAATCACTTCAACATTTGCT+AGG | 0.466556 | 4_4:+36574280 | Msa0679110:CDS |
| AAGAAATGTGGTCACATGGC+GGG | 0.470668 | 4_4:+36573469 | Msa0679110:CDS |
| TTGGACACAATTTACGTCTC+AGG | 0.472223 | 4_4:+36573130 | Msa0679110:CDS |
| AGCTGAACTTCAGGCATTGG+AGG | 0.474914 | 4_4:+36573732 | Msa0679110:CDS |
| ATGCTGTTCTGTTGGCTTGG+TGG | 0.477703 | 4_4:-36573054 | None:intergenic |
| TGCGCAGTTGAAGACTTTCT+CGG | 0.480621 | 4_4:+36573771 | Msa0679110:CDS |
| AAGATCGGGACCAGGTTCAT+TGG | 0.481378 | 4_4:-36573182 | None:intergenic |
| TCGGTACCTCAAAACTATCC+AGG | 0.481959 | 4_4:+36574416 | Msa0679110:CDS |
| GGCTTTGCTTCTGGAAAGAG+TGG | 0.500361 | 4_4:+36573709 | Msa0679110:CDS |
| TGTTCTCGATGCTGTTCTGT+TGG | 0.500590 | 4_4:-36573062 | None:intergenic |
| TGGAGCTGAACTTCAGGCAT+TGG | 0.503758 | 4_4:+36573729 | Msa0679110:CDS |
| GTTACCGCGGCTATTGTTCG+TGG | 0.504473 | 4_4:+36574003 | Msa0679110:CDS |
| GTAAGGGTAATCAGCAAGAT+CGG | 0.507816 | 4_4:-36573197 | None:intergenic |
| AAACTCTTTCCCTTGAGACT+CGG | 0.508721 | 4_4:-36573667 | None:intergenic |
| TGCTTGCACCTCCGCTACTT+CGG | 0.511139 | 4_4:-36572897 | None:intergenic |
| GTTGAAGACTTTCTCGGAAG+CGG | 0.511981 | 4_4:+36573777 | Msa0679110:CDS |
| TACACTTGCTCATCAGAAAT+GGG | 0.513240 | 4_4:+36574374 | Msa0679110:CDS |
| TCAACCGCTGCAATGGGAAA+AGG | 0.513835 | 4_4:+36574450 | Msa0679110:CDS |
| TGGCAGCATGGTGGTTGCTA+AGG | 0.514689 | 4_4:+36574814 | Msa0679110:CDS |
| TTGTTCGGGACAGTGTCGTA+AGG | 0.517461 | 4_4:-36573214 | None:intergenic |
| TGTTGCGTCAACCGCTGCAA+TGG | 0.518520 | 4_4:+36574443 | Msa0679110:CDS |
| TTCAATCCAATATTGATACA+AGG | 0.519422 | 4_4:+36573614 | Msa0679110:CDS |
| TCCGGTCCAAGTCACTCAAA+TGG | 0.523770 | 4_4:+36573099 | Msa0679110:CDS |
| GTCTTTCAATTGAGGAAGGT+AGG | 0.525513 | 4_4:+36573890 | Msa0679110:CDS |
| AATCACTTCAACATTTGCTA+GGG | 0.528772 | 4_4:+36574281 | Msa0679110:CDS |
| TGGCAGTTCATAACTGTTGG+AGG | 0.529681 | 4_4:+36574240 | Msa0679110:CDS |
| GCTGATGGTGACACTGGATT+CGG | 0.531005 | 4_4:+36573358 | Msa0679110:CDS |
| TAAGGGTAATCAGCAAGATC+GGG | 0.533195 | 4_4:-36573196 | None:intergenic |
| AAGCATGGTGGAACACAGAC+AGG | 0.535422 | 4_4:+36572915 | Msa0679110:CDS |
| AAAGGAGGAGGTTGAACGAG+TGG | 0.536117 | 4_4:+36573842 | Msa0679110:CDS |
| GTTGCGTCAACCGCTGCAAT+GGG | 0.541092 | 4_4:+36574444 | Msa0679110:CDS |
| TCTTTCAATTGAGGAAGGTA+GGG | 0.543833 | 4_4:+36573891 | Msa0679110:CDS |
| AAGGAAACATGGACTAGGCC+AGG | 0.547173 | 4_4:+36574767 | Msa0679110:CDS |
| CACACAACTACCAATGAACC+TGG | 0.547976 | 4_4:+36573172 | Msa0679110:CDS |
| GAAGCATCCCAATTAAAAGA+TGG | 0.548954 | 4_4:-36574156 | None:intergenic |
| AGAAATGTGGTCACATGGCG+GGG | 0.550249 | 4_4:+36573470 | Msa0679110:CDS |
| GCAAGTCCCAATCCCAAAAG+AGG | 0.559513 | 4_4:-36573942 | None:intergenic |
| TTAATAGGCTTGTTGCTGCA+AGG | 0.563432 | 4_4:+36573521 | Msa0679110:CDS |
| ATAATAGCTGATGGTGACAC+TGG | 0.566898 | 4_4:+36573352 | Msa0679110:CDS |
| ATGTTAACGAGGATGAGAAA+AGG | 0.568265 | 4_4:+36573824 | Msa0679110:CDS |
| TGCTGCTGGGATTCACATTG+AGG | 0.568298 | 4_4:+36573429 | Msa0679110:CDS |
| GAGTGCACACAGTTTGCTGA+AGG | 0.569482 | 4_4:+36574087 | Msa0679110:CDS |
| TCAATCCAATATTGATACAA+GGG | 0.570551 | 4_4:+36573615 | Msa0679110:CDS |
| ACGAGGATGAGAAAAGGAGG+AGG | 0.572283 | 4_4:+36573830 | Msa0679110:CDS |
| TTCATTGGTAGTTGTGTGTG+TGG | 0.576063 | 4_4:-36573167 | None:intergenic |
| CAGATTCGAGTCCGAAGTAG+CGG | 0.578055 | 4_4:+36572886 | Msa0679110:CDS |
| AAGTATCCACAGATATTGCT+CGG | 0.578731 | 4_4:+36574120 | Msa0679110:CDS |
| ACACAATTTACGTCTCAGGC+TGG | 0.581139 | 4_4:+36573134 | Msa0679110:CDS |
| CTTGCTCATCAGAAATGGGC+CGG | 0.586178 | 4_4:+36574378 | Msa0679110:CDS |
| GACTTGCCTAGAACTAGAGA+AGG | 0.586444 | 4_4:+36573958 | Msa0679110:CDS |
| AAATGTCTTTCAATTGAGGA+AGG | 0.590744 | 4_4:+36573886 | Msa0679110:CDS |
| AAGTAGCGGAGGTGCAAGCA+TGG | 0.591579 | 4_4:+36572900 | Msa0679110:CDS |
| TTCAGGCATTGGAGGATCAG+TGG | 0.592167 | 4_4:+36573740 | Msa0679110:CDS |
| TATGAGTGATATCGAAATGA+GGG | 0.592706 | 4_4:+36574182 | Msa0679110:CDS |
| TGTCGAAAGGATTCAAAGAG+AGG | 0.592801 | 4_4:+36574332 | Msa0679110:CDS |
| ATGGACTAGGCCAGGAACAG+TGG | 0.593862 | 4_4:+36574775 | Msa0679110:CDS |
| TTAACGAGGATGAGAAAAGG+AGG | 0.595598 | 4_4:+36573827 | Msa0679110:CDS |
| ACACGCTGATCTTATCTGGA+TGG | 0.596230 | 4_4:+36574041 | Msa0679110:CDS |
| CGTGACGAATCCGAGTCTCA+AGG | 0.596465 | 4_4:+36573657 | Msa0679110:CDS |
| CGGTACCTCAAAACTATCCA+GGG | 0.597608 | 4_4:+36574417 | Msa0679110:CDS |
| TAATCAGCAAGATCGGGACC+AGG | 0.598444 | 4_4:-36573190 | None:intergenic |
| GTGTGGCAGTTCATAACTGT+TGG | 0.599082 | 4_4:+36574237 | Msa0679110:CDS |
| TGTTCGGGACAGTGTCGTAA+GGG | 0.599131 | 4_4:-36573213 | None:intergenic |
| AAAGGATTCAAAGAGAGGAA+AGG | 0.602995 | 4_4:+36574337 | Msa0679110:CDS |
| GTATGAGTGATATCGAAATG+AGG | 0.607660 | 4_4:+36574181 | Msa0679110:CDS |
| GTGACGAATCCGAGTCTCAA+GGG | 0.609702 | 4_4:+36573658 | Msa0679110:CDS |
| TTGGCAACAGTTATGGCACA+AGG | 0.611584 | 4_4:+36573688 | Msa0679110:CDS |
| CAAAGAGAGGAAAGGAACAA+TGG | 0.612502 | 4_4:+36574345 | Msa0679110:CDS |
| AAGATCAATTTAAGGAAACA+TGG | 0.613442 | 4_4:+36574756 | Msa0679110:CDS |
| AATTTAAGGAAACATGGACT+AGG | 0.614157 | 4_4:+36574762 | Msa0679110:CDS |
| GTTTAAAGGTTCTGTTACCG+CGG | 0.615374 | 4_4:+36573990 | Msa0679110:CDS |
| CGGTTGACGCAACACCACCC+TGG | 0.615584 | 4_4:-36574434 | None:intergenic |
| GGAAACAGCAAGTCCAAATG+TGG | 0.619509 | 4_4:+36574062 | Msa0679110:CDS |
| TTGAGACCGATAATAGCTGA+TGG | 0.627292 | 4_4:+36573343 | Msa0679110:CDS |
| TGGACTAGGCCAGGAACAGT+GGG | 0.628373 | 4_4:+36574776 | Msa0679110:CDS |
| CAAGAGCCAAAATGTTAACG+AGG | 0.635217 | 4_4:+36573813 | Msa0679110:CDS |
| ACAGAAAGCAAAGAGAAGAG+AGG | 0.637146 | 4_4:+36573272 | Msa0679110:CDS |
| ACTTGCCTAGAACTAGAGAA+GGG | 0.637521 | 4_4:+36573959 | Msa0679110:CDS |
| ATTCGAGTCCGAAGTAGCGG+AGG | 0.641135 | 4_4:+36572889 | Msa0679110:CDS |
| GAATGCTAGCTTATGTCGAA+AGG | 0.643433 | 4_4:+36574319 | Msa0679110:CDS |
| TCGCTCAGTTAGGGTATGTG+TGG | 0.644468 | 4_4:+36574220 | Msa0679110:CDS |
| TGATAGAGATAATGGCAGCA+TGG | 0.645388 | 4_4:+36574802 | Msa0679110:CDS |
| CCGGTGCGAATTACTATGAT+CGG | 0.645865 | 4_4:+36574397 | Msa0679110:CDS |
| TCATCTGTGACTAAGAAATG+TGG | 0.647967 | 4_4:+36573457 | Msa0679110:CDS |
| TAGCGGAGGTGCAAGCATGG+TGG | 0.664228 | 4_4:+36572903 | Msa0679110:CDS |
| GACTAAGAAATGTGGTCACA+TGG | 0.665396 | 4_4:+36573465 | Msa0679110:CDS |
| AGTGCACACAGTTTGCTGAA+GGG | 0.671542 | 4_4:+36574088 | Msa0679110:CDS |
| TTGTATCCGAGCAATATCTG+TGG | 0.672590 | 4_4:-36574126 | None:intergenic |
| TAAGAAATGTGGTCACATGG+CGG | 0.675905 | 4_4:+36573468 | Msa0679110:CDS |
| GATGGTGACACTGGATTCGG+TGG | 0.684262 | 4_4:+36573361 | Msa0679110:CDS |
| CCGATCATAGTAATTCGCAC+CGG | 0.697391 | 4_4:-36574397 | None:intergenic |
| ATCCAGATAAGATCAGCGTG+TGG | 0.728979 | 4_4:-36574039 | None:intergenic |
| ACAACCACGAACAATAGCCG+CGG | 0.738778 | 4_4:-36574007 | None:intergenic |
| TACCTCAAAACTATCCAGGG+TGG | 0.741495 | 4_4:+36574420 | Msa0679110:CDS |
| TAGAGATAATGGCAGCATGG+TGG | 0.765792 | 4_4:+36574805 | Msa0679110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATGTTACAATTA+AGG | + | chr4_4:36574482-36574501 | Msa0679110:intron | 10.0% |
| !!! | TTACGATTTTAATTTTTTAT+AGG | + | chr4_4:36574725-36574744 | Msa0679110:intron | 10.0% |
| !! | ATAAATTAATGTTACAATTA+AGG | + | chr4_4:36574482-36574501 | Msa0679110:intron | 10.0% |
| !!! | TTACGATTTTAATTTTTTAT+AGG | + | chr4_4:36574725-36574744 | Msa0679110:intron | 10.0% |
| ! | AAAAGATGTTCAACTTTGTT+CGG | - | chr4_4:36573232-36573251 | None:intergenic | 25.0% |
| ! | TTCAATCCAATATTGATACA+AGG | + | chr4_4:36573614-36573633 | Msa0679110:CDS | 25.0% |
| ! | TCAATCCAATATTGATACAA+GGG | + | chr4_4:36573615-36573634 | Msa0679110:CDS | 25.0% |
| ! | TGTTACTGAAGATCAATTTA+AGG | + | chr4_4:36574748-36574767 | Msa0679110:CDS | 25.0% |
| ! | AAGATCAATTTAAGGAAACA+TGG | + | chr4_4:36574756-36574775 | Msa0679110:CDS | 25.0% |
| ! | AAAAGATGTTCAACTTTGTT+CGG | - | chr4_4:36573232-36573251 | None:intergenic | 25.0% |
| ! | TTCAATCCAATATTGATACA+AGG | + | chr4_4:36573614-36573633 | Msa0679110:CDS | 25.0% |
| ! | TCAATCCAATATTGATACAA+GGG | + | chr4_4:36573615-36573634 | Msa0679110:CDS | 25.0% |
| ! | TGTTACTGAAGATCAATTTA+AGG | + | chr4_4:36574748-36574767 | Msa0679110:CDS | 25.0% |
| ! | AAGATCAATTTAAGGAAACA+TGG | + | chr4_4:36574756-36574775 | Msa0679110:CDS | 25.0% |
| AAAGATGTAGTTTCTCTTAG+AGG | + | chr4_4:36572968-36572987 | Msa0679110:CDS | 30.0% | |
| ! | CTTTTTGGATAACTCATTTG+AGG | - | chr4_4:36573014-36573033 | None:intergenic | 30.0% |
| ATGAGTTATCCAAAAAGCTA+TGG | + | chr4_4:36573017-36573036 | Msa0679110:CDS | 30.0% | |
| AAAGATGTTCAACTTTGTTC+GGG | - | chr4_4:36573231-36573250 | None:intergenic | 30.0% | |
| GGTCTCAAATAATCGATAAA+AGG | - | chr4_4:36573331-36573350 | None:intergenic | 30.0% | |
| CGGTTAGTGAACATATTAAT+AGG | + | chr4_4:36573506-36573525 | Msa0679110:CDS | 30.0% | |
| AAGGCTTCAATTTGATGTTA+TGG | + | chr4_4:36573540-36573559 | Msa0679110:CDS | 30.0% | |
| AGGCTTCAATTTGATGTTAT+GGG | + | chr4_4:36573541-36573560 | Msa0679110:CDS | 30.0% | |
| ATGATCCCTTGTATCAATAT+TGG | - | chr4_4:36573623-36573642 | None:intergenic | 30.0% | |
| ! | AAGGGATCATCAGTTTATTT+TGG | + | chr4_4:36573633-36573652 | Msa0679110:CDS | 30.0% |
| !! | AGGGATCATCAGTTTATTTT+GGG | + | chr4_4:36573634-36573653 | Msa0679110:CDS | 30.0% |
| AAATGTCTTTCAATTGAGGA+AGG | + | chr4_4:36573886-36573905 | Msa0679110:CDS | 30.0% | |
| ! | ATCTTTCGCCATCTTTTAAT+TGG | + | chr4_4:36574148-36574167 | Msa0679110:CDS | 30.0% |
| !! | TCTTTCGCCATCTTTTAATT+GGG | + | chr4_4:36574149-36574168 | Msa0679110:CDS | 30.0% |
| !! | ATCTTTTAATTGGGATGCTT+CGG | + | chr4_4:36574158-36574177 | Msa0679110:CDS | 30.0% |
| TATGAGTGATATCGAAATGA+GGG | + | chr4_4:36574182-36574201 | Msa0679110:CDS | 30.0% | |
| TAATCACTTCAACATTTGCT+AGG | + | chr4_4:36574280-36574299 | Msa0679110:CDS | 30.0% | |
| ! | AATCACTTCAACATTTGCTA+GGG | + | chr4_4:36574281-36574300 | Msa0679110:CDS | 30.0% |
| !! | ATAACGAGGGTTTTCTAAAA+AGG | - | chr4_4:36574661-36574680 | None:intergenic | 30.0% |
| AAAAATTAGCGCTATAACGA+GGG | - | chr4_4:36574674-36574693 | None:intergenic | 30.0% | |
| AAAAAATTAGCGCTATAACG+AGG | - | chr4_4:36574675-36574694 | None:intergenic | 30.0% | |
| AATTTAAGGAAACATGGACT+AGG | + | chr4_4:36574762-36574781 | Msa0679110:CDS | 30.0% | |
| AAAGATGTAGTTTCTCTTAG+AGG | + | chr4_4:36572968-36572987 | Msa0679110:CDS | 30.0% | |
| ! | CTTTTTGGATAACTCATTTG+AGG | - | chr4_4:36573014-36573033 | None:intergenic | 30.0% |
| ATGAGTTATCCAAAAAGCTA+TGG | + | chr4_4:36573017-36573036 | Msa0679110:CDS | 30.0% | |
| AAAGATGTTCAACTTTGTTC+GGG | - | chr4_4:36573231-36573250 | None:intergenic | 30.0% | |
| GGTCTCAAATAATCGATAAA+AGG | - | chr4_4:36573331-36573350 | None:intergenic | 30.0% | |
| CGGTTAGTGAACATATTAAT+AGG | + | chr4_4:36573506-36573525 | Msa0679110:CDS | 30.0% | |
| AAGGCTTCAATTTGATGTTA+TGG | + | chr4_4:36573540-36573559 | Msa0679110:CDS | 30.0% | |
| AGGCTTCAATTTGATGTTAT+GGG | + | chr4_4:36573541-36573560 | Msa0679110:CDS | 30.0% | |
| ATGATCCCTTGTATCAATAT+TGG | - | chr4_4:36573623-36573642 | None:intergenic | 30.0% | |
| ! | AAGGGATCATCAGTTTATTT+TGG | + | chr4_4:36573633-36573652 | Msa0679110:CDS | 30.0% |
| !! | AGGGATCATCAGTTTATTTT+GGG | + | chr4_4:36573634-36573653 | Msa0679110:CDS | 30.0% |
| AAATGTCTTTCAATTGAGGA+AGG | + | chr4_4:36573886-36573905 | Msa0679110:CDS | 30.0% | |
| ! | ATCTTTCGCCATCTTTTAAT+TGG | + | chr4_4:36574148-36574167 | Msa0679110:CDS | 30.0% |
| !! | TCTTTCGCCATCTTTTAATT+GGG | + | chr4_4:36574149-36574168 | Msa0679110:CDS | 30.0% |
| !! | ATCTTTTAATTGGGATGCTT+CGG | + | chr4_4:36574158-36574177 | Msa0679110:CDS | 30.0% |
| TATGAGTGATATCGAAATGA+GGG | + | chr4_4:36574182-36574201 | Msa0679110:CDS | 30.0% | |
| TAATCACTTCAACATTTGCT+AGG | + | chr4_4:36574280-36574299 | Msa0679110:CDS | 30.0% | |
| ! | AATCACTTCAACATTTGCTA+GGG | + | chr4_4:36574281-36574300 | Msa0679110:CDS | 30.0% |
| !! | ATAACGAGGGTTTTCTAAAA+AGG | - | chr4_4:36574661-36574680 | None:intergenic | 30.0% |
| AAAAATTAGCGCTATAACGA+GGG | - | chr4_4:36574674-36574693 | None:intergenic | 30.0% | |
| AAAAAATTAGCGCTATAACG+AGG | - | chr4_4:36574675-36574694 | None:intergenic | 30.0% | |
| AATTTAAGGAAACATGGACT+AGG | + | chr4_4:36574762-36574781 | Msa0679110:CDS | 30.0% | |
| ! | TTTTGCTGAGTATGGTCTTT+GGG | - | chr4_4:36572951-36572970 | None:intergenic | 35.0% |
| ! | ACTACATCTTTTGCTGAGTA+TGG | - | chr4_4:36572959-36572978 | None:intergenic | 35.0% |
| TCATCTGTGACTAAGAAATG+TGG | + | chr4_4:36573457-36573476 | Msa0679110:CDS | 35.0% | |
| ! | TATGGGAGTTGAAACTGTTT+TGG | + | chr4_4:36573558-36573577 | Msa0679110:CDS | 35.0% |
| AAAGAGTTTGGCAACAGTTA+TGG | + | chr4_4:36573681-36573700 | Msa0679110:CDS | 35.0% | |
| ! | TCTCATCCTCGTTAACATTT+TGG | - | chr4_4:36573822-36573841 | None:intergenic | 35.0% |
| ATGTTAACGAGGATGAGAAA+AGG | + | chr4_4:36573824-36573843 | Msa0679110:CDS | 35.0% | |
| CGAGAAATGTCTTTCAATTG+AGG | + | chr4_4:36573882-36573901 | Msa0679110:CDS | 35.0% | |
| TCTTTCAATTGAGGAAGGTA+GGG | + | chr4_4:36573891-36573910 | Msa0679110:CDS | 35.0% | |
| !! | TAAAACCCTTCTCTAGTTCT+AGG | - | chr4_4:36573967-36573986 | None:intergenic | 35.0% |
| ! | GAAGGGTTTTACAGGTTTAA+AGG | + | chr4_4:36573976-36573995 | Msa0679110:CDS | 35.0% |
| AAGTATCCACAGATATTGCT+CGG | + | chr4_4:36574120-36574139 | Msa0679110:CDS | 35.0% | |
| ! | GAAGCATCCCAATTAAAAGA+TGG | - | chr4_4:36574159-36574178 | None:intergenic | 35.0% |
| !! | TCTTTTAATTGGGATGCTTC+GGG | + | chr4_4:36574159-36574178 | Msa0679110:CDS | 35.0% |
| GTATGAGTGATATCGAAATG+AGG | + | chr4_4:36574181-36574200 | Msa0679110:CDS | 35.0% | |
| AAAGGATTCAAAGAGAGGAA+AGG | + | chr4_4:36574337-36574356 | Msa0679110:CDS | 35.0% | |
| ATACACTTGCTCATCAGAAA+TGG | + | chr4_4:36574373-36574392 | Msa0679110:CDS | 35.0% | |
| TACACTTGCTCATCAGAAAT+GGG | + | chr4_4:36574374-36574393 | Msa0679110:CDS | 35.0% | |
| AGTGACTCTCAGTAATATCA+AGG | - | chr4_4:36574546-36574565 | None:intergenic | 35.0% | |
| ! | TTTTGCTGAGTATGGTCTTT+GGG | - | chr4_4:36572951-36572970 | None:intergenic | 35.0% |
| ! | ACTACATCTTTTGCTGAGTA+TGG | - | chr4_4:36572959-36572978 | None:intergenic | 35.0% |
| TCATCTGTGACTAAGAAATG+TGG | + | chr4_4:36573457-36573476 | Msa0679110:CDS | 35.0% | |
| ! | TATGGGAGTTGAAACTGTTT+TGG | + | chr4_4:36573558-36573577 | Msa0679110:CDS | 35.0% |
| AAAGAGTTTGGCAACAGTTA+TGG | + | chr4_4:36573681-36573700 | Msa0679110:CDS | 35.0% | |
| ! | TCTCATCCTCGTTAACATTT+TGG | - | chr4_4:36573822-36573841 | None:intergenic | 35.0% |
| ATGTTAACGAGGATGAGAAA+AGG | + | chr4_4:36573824-36573843 | Msa0679110:CDS | 35.0% | |
| CGAGAAATGTCTTTCAATTG+AGG | + | chr4_4:36573882-36573901 | Msa0679110:CDS | 35.0% | |
| TCTTTCAATTGAGGAAGGTA+GGG | + | chr4_4:36573891-36573910 | Msa0679110:CDS | 35.0% | |
| !! | TAAAACCCTTCTCTAGTTCT+AGG | - | chr4_4:36573967-36573986 | None:intergenic | 35.0% |
| ! | GAAGGGTTTTACAGGTTTAA+AGG | + | chr4_4:36573976-36573995 | Msa0679110:CDS | 35.0% |
| AAGTATCCACAGATATTGCT+CGG | + | chr4_4:36574120-36574139 | Msa0679110:CDS | 35.0% | |
| ! | GAAGCATCCCAATTAAAAGA+TGG | - | chr4_4:36574159-36574178 | None:intergenic | 35.0% |
| !! | TCTTTTAATTGGGATGCTTC+GGG | + | chr4_4:36574159-36574178 | Msa0679110:CDS | 35.0% |
| GTATGAGTGATATCGAAATG+AGG | + | chr4_4:36574181-36574200 | Msa0679110:CDS | 35.0% | |
| AAAGGATTCAAAGAGAGGAA+AGG | + | chr4_4:36574337-36574356 | Msa0679110:CDS | 35.0% | |
| ATACACTTGCTCATCAGAAA+TGG | + | chr4_4:36574373-36574392 | Msa0679110:CDS | 35.0% | |
| TACACTTGCTCATCAGAAAT+GGG | + | chr4_4:36574374-36574393 | Msa0679110:CDS | 35.0% | |
| AGTGACTCTCAGTAATATCA+AGG | - | chr4_4:36574546-36574565 | None:intergenic | 35.0% | |
| ! | CTTTTGCTGAGTATGGTCTT+TGG | - | chr4_4:36572952-36572971 | None:intergenic | 40.0% |
| TTGAGGCATAGGTTTGTCTT+AGG | - | chr4_4:36572997-36573016 | None:intergenic | 40.0% | |
| ! | GGATAACTCATTTGAGGCAT+AGG | - | chr4_4:36573008-36573027 | None:intergenic | 40.0% |
| ! | GAGAAGTCTCCATAGCTTTT+TGG | - | chr4_4:36573029-36573048 | None:intergenic | 40.0% |
| ! | AGAACAGCATCGAGAACATT+TGG | + | chr4_4:36573067-36573086 | Msa0679110:CDS | 40.0% |
| !! | AACATTTGGTGCACTTGATC+CGG | + | chr4_4:36573081-36573100 | Msa0679110:CDS | 40.0% |
| !! | GTTTTGCCATTTGAGTGACT+TGG | - | chr4_4:36573108-36573127 | None:intergenic | 40.0% |
| CACTCAAATGGCAAAACACT+TGG | + | chr4_4:36573111-36573130 | Msa0679110:CDS | 40.0% | |
| TTGGACACAATTTACGTCTC+AGG | + | chr4_4:36573130-36573149 | Msa0679110:CDS | 40.0% | |
| ! | TTCATTGGTAGTTGTGTGTG+TGG | - | chr4_4:36573170-36573189 | None:intergenic | 40.0% |
| TAAGGGTAATCAGCAAGATC+GGG | - | chr4_4:36573199-36573218 | None:intergenic | 40.0% | |
| GTAAGGGTAATCAGCAAGAT+CGG | - | chr4_4:36573200-36573219 | None:intergenic | 40.0% | |
| ACAGAAAGCAAAGAGAAGAG+AGG | + | chr4_4:36573272-36573291 | Msa0679110:CDS | 40.0% | |
| ! | GCATTTTTGCTCGATCTTCT+CGG | - | chr4_4:36573309-36573328 | None:intergenic | 40.0% |
| TTGAGACCGATAATAGCTGA+TGG | + | chr4_4:36573343-36573362 | Msa0679110:CDS | 40.0% | |
| GTGTCACCATCAGCTATTAT+CGG | - | chr4_4:36573352-36573371 | None:intergenic | 40.0% | |
| ! | ATAATAGCTGATGGTGACAC+TGG | + | chr4_4:36573352-36573371 | Msa0679110:CDS | 40.0% |
| ! | TGTAAGCTTTTTGTCGAACG+CGG | + | chr4_4:36573406-36573425 | Msa0679110:CDS | 40.0% |
| GACTAAGAAATGTGGTCACA+TGG | + | chr4_4:36573465-36573484 | Msa0679110:CDS | 40.0% | |
| TAAGAAATGTGGTCACATGG+CGG | + | chr4_4:36573468-36573487 | Msa0679110:CDS | 40.0% | |
| !! | TTAATAGGCTTGTTGCTGCA+AGG | + | chr4_4:36573521-36573540 | Msa0679110:CDS | 40.0% |
| AAACTCTTTCCCTTGAGACT+CGG | - | chr4_4:36573670-36573689 | None:intergenic | 40.0% | |
| CAAGAGCCAAAATGTTAACG+AGG | + | chr4_4:36573813-36573832 | Msa0679110:CDS | 40.0% | |
| TTAACGAGGATGAGAAAAGG+AGG | + | chr4_4:36573827-36573846 | Msa0679110:CDS | 40.0% | |
| GTCTTTCAATTGAGGAAGGT+AGG | + | chr4_4:36573890-36573909 | Msa0679110:CDS | 40.0% | |
| ! | AGGGAGATTTCTGAGAGATT+AGG | + | chr4_4:36573910-36573929 | Msa0679110:CDS | 40.0% |
| ! | TAGGTGTGAGAAACCTCTTT+TGG | + | chr4_4:36573929-36573948 | Msa0679110:CDS | 40.0% |
| ! | AGGTGTGAGAAACCTCTTTT+GGG | + | chr4_4:36573930-36573949 | Msa0679110:CDS | 40.0% |
| !!! | TGAGAAACCTCTTTTGGGAT+TGG | + | chr4_4:36573935-36573954 | Msa0679110:CDS | 40.0% |
| !!! | GAGAAACCTCTTTTGGGATT+GGG | + | chr4_4:36573936-36573955 | Msa0679110:CDS | 40.0% |
| ACTTGCCTAGAACTAGAGAA+GGG | + | chr4_4:36573959-36573978 | Msa0679110:CDS | 40.0% | |
| ! | GAACTAGAGAAGGGTTTTAC+AGG | + | chr4_4:36573968-36573987 | Msa0679110:CDS | 40.0% |
| GTTTAAAGGTTCTGTTACCG+CGG | + | chr4_4:36573990-36574009 | Msa0679110:CDS | 40.0% | |
| TTGTATCCGAGCAATATCTG+TGG | - | chr4_4:36574129-36574148 | None:intergenic | 40.0% | |
| ATTCCTAAGATCGCTCAGTT+AGG | + | chr4_4:36574210-36574229 | Msa0679110:CDS | 40.0% | |
| TTCCTAAGATCGCTCAGTTA+GGG | + | chr4_4:36574211-36574230 | Msa0679110:CDS | 40.0% | |
| ! | TTGCTAGGGATTTTGCTAAC+AGG | + | chr4_4:36574295-36574314 | Msa0679110:CDS | 40.0% |
| ! | TGCTAGGGATTTTGCTAACA+GGG | + | chr4_4:36574296-36574315 | Msa0679110:CDS | 40.0% |
| ! | GAATGCTAGCTTATGTCGAA+AGG | + | chr4_4:36574319-36574338 | Msa0679110:CDS | 40.0% |
| TGTCGAAAGGATTCAAAGAG+AGG | + | chr4_4:36574332-36574351 | Msa0679110:CDS | 40.0% | |
| CAAAGAGAGGAAAGGAACAA+TGG | + | chr4_4:36574345-36574364 | Msa0679110:CDS | 40.0% | |
| CTGAGAGTCACTATCAAATG+TGG | + | chr4_4:36574554-36574573 | Msa0679110:intron | 40.0% | |
| AAATGTGGCGAATGTCAAAG+TGG | + | chr4_4:36574569-36574588 | Msa0679110:intron | 40.0% | |
| AATGTGGCGAATGTCAAAGT+GGG | + | chr4_4:36574570-36574589 | Msa0679110:intron | 40.0% | |
| GTCAAAGTGGGATCAAATTG+TGG | + | chr4_4:36574582-36574601 | Msa0679110:intron | 40.0% | |
| CATCAAAAACCTTGATGTCG+CGG | + | chr4_4:36574614-36574633 | Msa0679110:intron | 40.0% | |
| !! | GTGGGCATTGATAGAGATAA+TGG | + | chr4_4:36574794-36574813 | Msa0679110:CDS | 40.0% |
| ! | TGATAGAGATAATGGCAGCA+TGG | + | chr4_4:36574802-36574821 | Msa0679110:CDS | 40.0% |
| ! | CTTTTGCTGAGTATGGTCTT+TGG | - | chr4_4:36572952-36572971 | None:intergenic | 40.0% |
| TTGAGGCATAGGTTTGTCTT+AGG | - | chr4_4:36572997-36573016 | None:intergenic | 40.0% | |
| ! | GGATAACTCATTTGAGGCAT+AGG | - | chr4_4:36573008-36573027 | None:intergenic | 40.0% |
| ! | GAGAAGTCTCCATAGCTTTT+TGG | - | chr4_4:36573029-36573048 | None:intergenic | 40.0% |
| ! | AGAACAGCATCGAGAACATT+TGG | + | chr4_4:36573067-36573086 | Msa0679110:CDS | 40.0% |
| !! | AACATTTGGTGCACTTGATC+CGG | + | chr4_4:36573081-36573100 | Msa0679110:CDS | 40.0% |
| !! | GTTTTGCCATTTGAGTGACT+TGG | - | chr4_4:36573108-36573127 | None:intergenic | 40.0% |
| CACTCAAATGGCAAAACACT+TGG | + | chr4_4:36573111-36573130 | Msa0679110:CDS | 40.0% | |
| TTGGACACAATTTACGTCTC+AGG | + | chr4_4:36573130-36573149 | Msa0679110:CDS | 40.0% | |
| ! | TTCATTGGTAGTTGTGTGTG+TGG | - | chr4_4:36573170-36573189 | None:intergenic | 40.0% |
| TAAGGGTAATCAGCAAGATC+GGG | - | chr4_4:36573199-36573218 | None:intergenic | 40.0% | |
| GTAAGGGTAATCAGCAAGAT+CGG | - | chr4_4:36573200-36573219 | None:intergenic | 40.0% | |
| ACAGAAAGCAAAGAGAAGAG+AGG | + | chr4_4:36573272-36573291 | Msa0679110:CDS | 40.0% | |
| ! | GCATTTTTGCTCGATCTTCT+CGG | - | chr4_4:36573309-36573328 | None:intergenic | 40.0% |
| TTGAGACCGATAATAGCTGA+TGG | + | chr4_4:36573343-36573362 | Msa0679110:CDS | 40.0% | |
| GTGTCACCATCAGCTATTAT+CGG | - | chr4_4:36573352-36573371 | None:intergenic | 40.0% | |
| ! | ATAATAGCTGATGGTGACAC+TGG | + | chr4_4:36573352-36573371 | Msa0679110:CDS | 40.0% |
| ! | TGTAAGCTTTTTGTCGAACG+CGG | + | chr4_4:36573406-36573425 | Msa0679110:CDS | 40.0% |
| GACTAAGAAATGTGGTCACA+TGG | + | chr4_4:36573465-36573484 | Msa0679110:CDS | 40.0% | |
| TAAGAAATGTGGTCACATGG+CGG | + | chr4_4:36573468-36573487 | Msa0679110:CDS | 40.0% | |
| !! | TTAATAGGCTTGTTGCTGCA+AGG | + | chr4_4:36573521-36573540 | Msa0679110:CDS | 40.0% |
| AAACTCTTTCCCTTGAGACT+CGG | - | chr4_4:36573670-36573689 | None:intergenic | 40.0% | |
| CAAGAGCCAAAATGTTAACG+AGG | + | chr4_4:36573813-36573832 | Msa0679110:CDS | 40.0% | |
| TTAACGAGGATGAGAAAAGG+AGG | + | chr4_4:36573827-36573846 | Msa0679110:CDS | 40.0% | |
| GTCTTTCAATTGAGGAAGGT+AGG | + | chr4_4:36573890-36573909 | Msa0679110:CDS | 40.0% | |
| ! | AGGGAGATTTCTGAGAGATT+AGG | + | chr4_4:36573910-36573929 | Msa0679110:CDS | 40.0% |
| ! | TAGGTGTGAGAAACCTCTTT+TGG | + | chr4_4:36573929-36573948 | Msa0679110:CDS | 40.0% |
| ! | AGGTGTGAGAAACCTCTTTT+GGG | + | chr4_4:36573930-36573949 | Msa0679110:CDS | 40.0% |
| !!! | TGAGAAACCTCTTTTGGGAT+TGG | + | chr4_4:36573935-36573954 | Msa0679110:CDS | 40.0% |
| !!! | GAGAAACCTCTTTTGGGATT+GGG | + | chr4_4:36573936-36573955 | Msa0679110:CDS | 40.0% |
| ACTTGCCTAGAACTAGAGAA+GGG | + | chr4_4:36573959-36573978 | Msa0679110:CDS | 40.0% | |
| ! | GAACTAGAGAAGGGTTTTAC+AGG | + | chr4_4:36573968-36573987 | Msa0679110:CDS | 40.0% |
| GTTTAAAGGTTCTGTTACCG+CGG | + | chr4_4:36573990-36574009 | Msa0679110:CDS | 40.0% | |
| TTGTATCCGAGCAATATCTG+TGG | - | chr4_4:36574129-36574148 | None:intergenic | 40.0% | |
| ATTCCTAAGATCGCTCAGTT+AGG | + | chr4_4:36574210-36574229 | Msa0679110:CDS | 40.0% | |
| TTCCTAAGATCGCTCAGTTA+GGG | + | chr4_4:36574211-36574230 | Msa0679110:CDS | 40.0% | |
| ! | TTGCTAGGGATTTTGCTAAC+AGG | + | chr4_4:36574295-36574314 | Msa0679110:CDS | 40.0% |
| ! | TGCTAGGGATTTTGCTAACA+GGG | + | chr4_4:36574296-36574315 | Msa0679110:CDS | 40.0% |
| ! | GAATGCTAGCTTATGTCGAA+AGG | + | chr4_4:36574319-36574338 | Msa0679110:CDS | 40.0% |
| TGTCGAAAGGATTCAAAGAG+AGG | + | chr4_4:36574332-36574351 | Msa0679110:CDS | 40.0% | |
| CAAAGAGAGGAAAGGAACAA+TGG | + | chr4_4:36574345-36574364 | Msa0679110:CDS | 40.0% | |
| CTGAGAGTCACTATCAAATG+TGG | + | chr4_4:36574554-36574573 | Msa0679110:intron | 40.0% | |
| AAATGTGGCGAATGTCAAAG+TGG | + | chr4_4:36574569-36574588 | Msa0679110:intron | 40.0% | |
| AATGTGGCGAATGTCAAAGT+GGG | + | chr4_4:36574570-36574589 | Msa0679110:intron | 40.0% | |
| GTCAAAGTGGGATCAAATTG+TGG | + | chr4_4:36574582-36574601 | Msa0679110:intron | 40.0% | |
| CATCAAAAACCTTGATGTCG+CGG | + | chr4_4:36574614-36574633 | Msa0679110:intron | 40.0% | |
| !! | GTGGGCATTGATAGAGATAA+TGG | + | chr4_4:36574794-36574813 | Msa0679110:CDS | 40.0% |
| ! | TGATAGAGATAATGGCAGCA+TGG | + | chr4_4:36574802-36574821 | Msa0679110:CDS | 40.0% |
| TGTTCTCGATGCTGTTCTGT+TGG | - | chr4_4:36573065-36573084 | None:intergenic | 45.0% | |
| ACACAATTTACGTCTCAGGC+TGG | + | chr4_4:36573134-36573153 | Msa0679110:CDS | 45.0% | |
| CACACAACTACCAATGAACC+TGG | + | chr4_4:36573172-36573191 | Msa0679110:CDS | 45.0% | |
| AAGAAATGTGGTCACATGGC+GGG | + | chr4_4:36573469-36573488 | Msa0679110:CDS | 45.0% | |
| GAGTCTCAAGGGAAAGAGTT+TGG | + | chr4_4:36573669-36573688 | Msa0679110:CDS | 45.0% | |
| TTGGCAACAGTTATGGCACA+AGG | + | chr4_4:36573688-36573707 | Msa0679110:CDS | 45.0% | |
| AAAGAGTGGAGCTGAACTTC+AGG | + | chr4_4:36573723-36573742 | Msa0679110:CDS | 45.0% | |
| TGCGCAGTTGAAGACTTTCT+CGG | + | chr4_4:36573771-36573790 | Msa0679110:CDS | 45.0% | |
| GTTGAAGACTTTCTCGGAAG+CGG | + | chr4_4:36573777-36573796 | Msa0679110:CDS | 45.0% | |
| GACTTGCCTAGAACTAGAGA+AGG | + | chr4_4:36573958-36573977 | Msa0679110:CDS | 45.0% | |
| ATCCAGATAAGATCAGCGTG+TGG | - | chr4_4:36574042-36574061 | None:intergenic | 45.0% | |
| ACACGCTGATCTTATCTGGA+TGG | + | chr4_4:36574041-36574060 | Msa0679110:CDS | 45.0% | |
| GGAAACAGCAAGTCCAAATG+TGG | + | chr4_4:36574062-36574081 | Msa0679110:CDS | 45.0% | |
| TGTGTGCACTCAACCACATT+TGG | - | chr4_4:36574078-36574097 | None:intergenic | 45.0% | |
| !! | AGTGCACACAGTTTGCTGAA+GGG | + | chr4_4:36574088-36574107 | Msa0679110:CDS | 45.0% |
| TACCCTAACTGAGCGATCTT+AGG | - | chr4_4:36574216-36574235 | None:intergenic | 45.0% | |
| GTGTGGCAGTTCATAACTGT+TGG | + | chr4_4:36574237-36574256 | Msa0679110:CDS | 45.0% | |
| TGGCAGTTCATAACTGTTGG+AGG | + | chr4_4:36574240-36574259 | Msa0679110:CDS | 45.0% | |
| ! | GCTAGGGATTTTGCTAACAG+GGG | + | chr4_4:36574297-36574316 | Msa0679110:CDS | 45.0% |
| CCGATCATAGTAATTCGCAC+CGG | - | chr4_4:36574400-36574419 | None:intergenic | 45.0% | |
| CCGGTGCGAATTACTATGAT+CGG | + | chr4_4:36574397-36574416 | Msa0679110:CDS | 45.0% | |
| TCGGTACCTCAAAACTATCC+AGG | + | chr4_4:36574416-36574435 | Msa0679110:CDS | 45.0% | |
| CGGTACCTCAAAACTATCCA+GGG | + | chr4_4:36574417-36574436 | Msa0679110:CDS | 45.0% | |
| TACCTCAAAACTATCCAGGG+TGG | + | chr4_4:36574420-36574439 | Msa0679110:CDS | 45.0% | |
| ! | CTTACCTTTTCCCATTGCAG+CGG | - | chr4_4:36574457-36574476 | None:intergenic | 45.0% |
| ! | TAGAGATAATGGCAGCATGG+TGG | + | chr4_4:36574805-36574824 | Msa0679110:CDS | 45.0% |
| TGTTCTCGATGCTGTTCTGT+TGG | - | chr4_4:36573065-36573084 | None:intergenic | 45.0% | |
| ACACAATTTACGTCTCAGGC+TGG | + | chr4_4:36573134-36573153 | Msa0679110:CDS | 45.0% | |
| CACACAACTACCAATGAACC+TGG | + | chr4_4:36573172-36573191 | Msa0679110:CDS | 45.0% | |
| AAGAAATGTGGTCACATGGC+GGG | + | chr4_4:36573469-36573488 | Msa0679110:CDS | 45.0% | |
| GAGTCTCAAGGGAAAGAGTT+TGG | + | chr4_4:36573669-36573688 | Msa0679110:CDS | 45.0% | |
| TTGGCAACAGTTATGGCACA+AGG | + | chr4_4:36573688-36573707 | Msa0679110:CDS | 45.0% | |
| AAAGAGTGGAGCTGAACTTC+AGG | + | chr4_4:36573723-36573742 | Msa0679110:CDS | 45.0% | |
| TGCGCAGTTGAAGACTTTCT+CGG | + | chr4_4:36573771-36573790 | Msa0679110:CDS | 45.0% | |
| GTTGAAGACTTTCTCGGAAG+CGG | + | chr4_4:36573777-36573796 | Msa0679110:CDS | 45.0% | |
| GACTTGCCTAGAACTAGAGA+AGG | + | chr4_4:36573958-36573977 | Msa0679110:CDS | 45.0% | |
| ATCCAGATAAGATCAGCGTG+TGG | - | chr4_4:36574042-36574061 | None:intergenic | 45.0% | |
| ACACGCTGATCTTATCTGGA+TGG | + | chr4_4:36574041-36574060 | Msa0679110:CDS | 45.0% | |
| GGAAACAGCAAGTCCAAATG+TGG | + | chr4_4:36574062-36574081 | Msa0679110:CDS | 45.0% | |
| TGTGTGCACTCAACCACATT+TGG | - | chr4_4:36574078-36574097 | None:intergenic | 45.0% | |
| !! | AGTGCACACAGTTTGCTGAA+GGG | + | chr4_4:36574088-36574107 | Msa0679110:CDS | 45.0% |
| TACCCTAACTGAGCGATCTT+AGG | - | chr4_4:36574216-36574235 | None:intergenic | 45.0% | |
| GTGTGGCAGTTCATAACTGT+TGG | + | chr4_4:36574237-36574256 | Msa0679110:CDS | 45.0% | |
| TGGCAGTTCATAACTGTTGG+AGG | + | chr4_4:36574240-36574259 | Msa0679110:CDS | 45.0% | |
| ! | GCTAGGGATTTTGCTAACAG+GGG | + | chr4_4:36574297-36574316 | Msa0679110:CDS | 45.0% |
| CCGATCATAGTAATTCGCAC+CGG | - | chr4_4:36574400-36574419 | None:intergenic | 45.0% | |
| CCGGTGCGAATTACTATGAT+CGG | + | chr4_4:36574397-36574416 | Msa0679110:CDS | 45.0% | |
| TCGGTACCTCAAAACTATCC+AGG | + | chr4_4:36574416-36574435 | Msa0679110:CDS | 45.0% | |
| CGGTACCTCAAAACTATCCA+GGG | + | chr4_4:36574417-36574436 | Msa0679110:CDS | 45.0% | |
| TACCTCAAAACTATCCAGGG+TGG | + | chr4_4:36574420-36574439 | Msa0679110:CDS | 45.0% | |
| ! | CTTACCTTTTCCCATTGCAG+CGG | - | chr4_4:36574457-36574476 | None:intergenic | 45.0% |
| ! | TAGAGATAATGGCAGCATGG+TGG | + | chr4_4:36574805-36574824 | Msa0679110:CDS | 45.0% |
| !!! | AATTTTTTTTAATAAAACAA+CGG | + | chr4_4:36574687-36574706 | Msa0679110:intron | 5.0% |
| !!! | AATTTTTTTTAATAAAACAA+CGG | + | chr4_4:36574687-36574706 | Msa0679110:intron | 5.0% |
| CAGATTCGAGTCCGAAGTAG+CGG | + | chr4_4:36572886-36572905 | Msa0679110:CDS | 50.0% | |
| ! | AAGCATGGTGGAACACAGAC+AGG | + | chr4_4:36572915-36572934 | Msa0679110:CDS | 50.0% |
| !! | TGCTGTTCTGTTGGCTTGGT+GGG | - | chr4_4:36573056-36573075 | None:intergenic | 50.0% |
| !! | ATGCTGTTCTGTTGGCTTGG+TGG | - | chr4_4:36573057-36573076 | None:intergenic | 50.0% |
| ! | TCGATGCTGTTCTGTTGGCT+TGG | - | chr4_4:36573060-36573079 | None:intergenic | 50.0% |
| TCCGGTCCAAGTCACTCAAA+TGG | + | chr4_4:36573099-36573118 | Msa0679110:CDS | 50.0% | |
| ! | GCCATTTGAGTGACTTGGAC+CGG | - | chr4_4:36573103-36573122 | None:intergenic | 50.0% |
| AAGATCGGGACCAGGTTCAT+TGG | - | chr4_4:36573185-36573204 | None:intergenic | 50.0% | |
| TAATCAGCAAGATCGGGACC+AGG | - | chr4_4:36573193-36573212 | None:intergenic | 50.0% | |
| TGTTCGGGACAGTGTCGTAA+GGG | - | chr4_4:36573216-36573235 | None:intergenic | 50.0% | |
| TTGTTCGGGACAGTGTCGTA+AGG | - | chr4_4:36573217-36573236 | None:intergenic | 50.0% | |
| ! | GCTGATGGTGACACTGGATT+CGG | + | chr4_4:36573358-36573377 | Msa0679110:CDS | 50.0% |
| TGCTGCTGGGATTCACATTG+AGG | + | chr4_4:36573429-36573448 | Msa0679110:CDS | 50.0% | |
| AGAAATGTGGTCACATGGCG+GGG | + | chr4_4:36573470-36573489 | Msa0679110:CDS | 50.0% | |
| !! | TCACATGGCGGGGAAAGTTT+TGG | + | chr4_4:36573480-36573499 | Msa0679110:CDS | 50.0% |
| GTGACGAATCCGAGTCTCAA+GGG | + | chr4_4:36573658-36573677 | Msa0679110:CDS | 50.0% | |
| ATGGCACAAGGCTTTGCTTC+TGG | + | chr4_4:36573700-36573719 | Msa0679110:CDS | 50.0% | |
| ! | GGCTTTGCTTCTGGAAAGAG+TGG | + | chr4_4:36573709-36573728 | Msa0679110:CDS | 50.0% |
| TGGAGCTGAACTTCAGGCAT+TGG | + | chr4_4:36573729-36573748 | Msa0679110:CDS | 50.0% | |
| !! | AGCTGAACTTCAGGCATTGG+AGG | + | chr4_4:36573732-36573751 | Msa0679110:CDS | 50.0% |
| !! | TTCAGGCATTGGAGGATCAG+TGG | + | chr4_4:36573740-36573759 | Msa0679110:CDS | 50.0% |
| ACGAGGATGAGAAAAGGAGG+AGG | + | chr4_4:36573830-36573849 | Msa0679110:CDS | 50.0% | |
| AAAGGAGGAGGTTGAACGAG+TGG | + | chr4_4:36573842-36573861 | Msa0679110:CDS | 50.0% | |
| GCAAGTCCCAATCCCAAAAG+AGG | - | chr4_4:36573945-36573964 | None:intergenic | 50.0% | |
| ACAACCACGAACAATAGCCG+CGG | - | chr4_4:36574010-36574029 | None:intergenic | 50.0% | |
| CACCACACGCTGATCTTATC+TGG | + | chr4_4:36574037-36574056 | Msa0679110:CDS | 50.0% | |
| !! | GAGTGCACACAGTTTGCTGA+AGG | + | chr4_4:36574087-36574106 | Msa0679110:CDS | 50.0% |
| TCGCTCAGTTAGGGTATGTG+TGG | + | chr4_4:36574220-36574239 | Msa0679110:CDS | 50.0% | |
| CTTGCTCATCAGAAATGGGC+CGG | + | chr4_4:36574378-36574397 | Msa0679110:CDS | 50.0% | |
| !! | CACCACCCTGGATAGTTTTG+AGG | - | chr4_4:36574425-36574444 | None:intergenic | 50.0% |
| TCAACCGCTGCAATGGGAAA+AGG | + | chr4_4:36574450-36574469 | Msa0679110:CDS | 50.0% | |
| !! | AAGGAAACATGGACTAGGCC+AGG | + | chr4_4:36574767-36574786 | Msa0679110:CDS | 50.0% |
| CTATCAATGCCCACTGTTCC+TGG | - | chr4_4:36574788-36574807 | None:intergenic | 50.0% | |
| CAGATTCGAGTCCGAAGTAG+CGG | + | chr4_4:36572886-36572905 | Msa0679110:CDS | 50.0% | |
| ! | AAGCATGGTGGAACACAGAC+AGG | + | chr4_4:36572915-36572934 | Msa0679110:CDS | 50.0% |
| !! | TGCTGTTCTGTTGGCTTGGT+GGG | - | chr4_4:36573056-36573075 | None:intergenic | 50.0% |
| !! | ATGCTGTTCTGTTGGCTTGG+TGG | - | chr4_4:36573057-36573076 | None:intergenic | 50.0% |
| ! | TCGATGCTGTTCTGTTGGCT+TGG | - | chr4_4:36573060-36573079 | None:intergenic | 50.0% |
| TCCGGTCCAAGTCACTCAAA+TGG | + | chr4_4:36573099-36573118 | Msa0679110:CDS | 50.0% | |
| ! | GCCATTTGAGTGACTTGGAC+CGG | - | chr4_4:36573103-36573122 | None:intergenic | 50.0% |
| AAGATCGGGACCAGGTTCAT+TGG | - | chr4_4:36573185-36573204 | None:intergenic | 50.0% | |
| TAATCAGCAAGATCGGGACC+AGG | - | chr4_4:36573193-36573212 | None:intergenic | 50.0% | |
| TGTTCGGGACAGTGTCGTAA+GGG | - | chr4_4:36573216-36573235 | None:intergenic | 50.0% | |
| TTGTTCGGGACAGTGTCGTA+AGG | - | chr4_4:36573217-36573236 | None:intergenic | 50.0% | |
| ! | GCTGATGGTGACACTGGATT+CGG | + | chr4_4:36573358-36573377 | Msa0679110:CDS | 50.0% |
| TGCTGCTGGGATTCACATTG+AGG | + | chr4_4:36573429-36573448 | Msa0679110:CDS | 50.0% | |
| AGAAATGTGGTCACATGGCG+GGG | + | chr4_4:36573470-36573489 | Msa0679110:CDS | 50.0% | |
| !! | TCACATGGCGGGGAAAGTTT+TGG | + | chr4_4:36573480-36573499 | Msa0679110:CDS | 50.0% |
| GTGACGAATCCGAGTCTCAA+GGG | + | chr4_4:36573658-36573677 | Msa0679110:CDS | 50.0% | |
| ATGGCACAAGGCTTTGCTTC+TGG | + | chr4_4:36573700-36573719 | Msa0679110:CDS | 50.0% | |
| ! | GGCTTTGCTTCTGGAAAGAG+TGG | + | chr4_4:36573709-36573728 | Msa0679110:CDS | 50.0% |
| TGGAGCTGAACTTCAGGCAT+TGG | + | chr4_4:36573729-36573748 | Msa0679110:CDS | 50.0% | |
| !! | AGCTGAACTTCAGGCATTGG+AGG | + | chr4_4:36573732-36573751 | Msa0679110:CDS | 50.0% |
| !! | TTCAGGCATTGGAGGATCAG+TGG | + | chr4_4:36573740-36573759 | Msa0679110:CDS | 50.0% |
| ACGAGGATGAGAAAAGGAGG+AGG | + | chr4_4:36573830-36573849 | Msa0679110:CDS | 50.0% | |
| AAAGGAGGAGGTTGAACGAG+TGG | + | chr4_4:36573842-36573861 | Msa0679110:CDS | 50.0% | |
| GCAAGTCCCAATCCCAAAAG+AGG | - | chr4_4:36573945-36573964 | None:intergenic | 50.0% | |
| ACAACCACGAACAATAGCCG+CGG | - | chr4_4:36574010-36574029 | None:intergenic | 50.0% | |
| CACCACACGCTGATCTTATC+TGG | + | chr4_4:36574037-36574056 | Msa0679110:CDS | 50.0% | |
| !! | GAGTGCACACAGTTTGCTGA+AGG | + | chr4_4:36574087-36574106 | Msa0679110:CDS | 50.0% |
| TCGCTCAGTTAGGGTATGTG+TGG | + | chr4_4:36574220-36574239 | Msa0679110:CDS | 50.0% | |
| CTTGCTCATCAGAAATGGGC+CGG | + | chr4_4:36574378-36574397 | Msa0679110:CDS | 50.0% | |
| !! | CACCACCCTGGATAGTTTTG+AGG | - | chr4_4:36574425-36574444 | None:intergenic | 50.0% |
| TCAACCGCTGCAATGGGAAA+AGG | + | chr4_4:36574450-36574469 | Msa0679110:CDS | 50.0% | |
| !! | AAGGAAACATGGACTAGGCC+AGG | + | chr4_4:36574767-36574786 | Msa0679110:CDS | 50.0% |
| CTATCAATGCCCACTGTTCC+TGG | - | chr4_4:36574788-36574807 | None:intergenic | 50.0% | |
| CGCTACTTCGGACTCGAATC+TGG | - | chr4_4:36572888-36572907 | None:intergenic | 55.0% | |
| ATTCGAGTCCGAAGTAGCGG+AGG | + | chr4_4:36572889-36572908 | Msa0679110:CDS | 55.0% | |
| TGCTTGCACCTCCGCTACTT+CGG | - | chr4_4:36572900-36572919 | None:intergenic | 55.0% | |
| ! | AAGTAGCGGAGGTGCAAGCA+TGG | + | chr4_4:36572900-36572919 | Msa0679110:CDS | 55.0% |
| GATGGTGACACTGGATTCGG+TGG | + | chr4_4:36573361-36573380 | Msa0679110:CDS | 55.0% | |
| !!! | GGCGGGGAAAGTTTTGGTTG+CGG | + | chr4_4:36573486-36573505 | Msa0679110:CDS | 55.0% |
| CGTGACGAATCCGAGTCTCA+AGG | + | chr4_4:36573657-36573676 | Msa0679110:CDS | 55.0% | |
| GTTACCGCGGCTATTGTTCG+TGG | + | chr4_4:36574003-36574022 | Msa0679110:CDS | 55.0% | |
| TGTTGCGTCAACCGCTGCAA+TGG | + | chr4_4:36574443-36574462 | Msa0679110:CDS | 55.0% | |
| GTTGCGTCAACCGCTGCAAT+GGG | + | chr4_4:36574444-36574463 | Msa0679110:CDS | 55.0% | |
| AGATCTGAGCCGCGACATCA+AGG | - | chr4_4:36574626-36574645 | None:intergenic | 55.0% | |
| !! | ATGGACTAGGCCAGGAACAG+TGG | + | chr4_4:36574775-36574794 | Msa0679110:CDS | 55.0% |
| ! | TGGACTAGGCCAGGAACAGT+GGG | + | chr4_4:36574776-36574795 | Msa0679110:CDS | 55.0% |
| TGGCAGCATGGTGGTTGCTA+AGG | + | chr4_4:36574814-36574833 | Msa0679110:CDS | 55.0% | |
| CGCTACTTCGGACTCGAATC+TGG | - | chr4_4:36572888-36572907 | None:intergenic | 55.0% | |
| ATTCGAGTCCGAAGTAGCGG+AGG | + | chr4_4:36572889-36572908 | Msa0679110:CDS | 55.0% | |
| TGCTTGCACCTCCGCTACTT+CGG | - | chr4_4:36572900-36572919 | None:intergenic | 55.0% | |
| ! | AAGTAGCGGAGGTGCAAGCA+TGG | + | chr4_4:36572900-36572919 | Msa0679110:CDS | 55.0% |
| GATGGTGACACTGGATTCGG+TGG | + | chr4_4:36573361-36573380 | Msa0679110:CDS | 55.0% | |
| !!! | GGCGGGGAAAGTTTTGGTTG+CGG | + | chr4_4:36573486-36573505 | Msa0679110:CDS | 55.0% |
| CGTGACGAATCCGAGTCTCA+AGG | + | chr4_4:36573657-36573676 | Msa0679110:CDS | 55.0% | |
| GTTACCGCGGCTATTGTTCG+TGG | + | chr4_4:36574003-36574022 | Msa0679110:CDS | 55.0% | |
| TGTTGCGTCAACCGCTGCAA+TGG | + | chr4_4:36574443-36574462 | Msa0679110:CDS | 55.0% | |
| GTTGCGTCAACCGCTGCAAT+GGG | + | chr4_4:36574444-36574463 | Msa0679110:CDS | 55.0% | |
| AGATCTGAGCCGCGACATCA+AGG | - | chr4_4:36574626-36574645 | None:intergenic | 55.0% | |
| !! | ATGGACTAGGCCAGGAACAG+TGG | + | chr4_4:36574775-36574794 | Msa0679110:CDS | 55.0% |
| ! | TGGACTAGGCCAGGAACAGT+GGG | + | chr4_4:36574776-36574795 | Msa0679110:CDS | 55.0% |
| TGGCAGCATGGTGGTTGCTA+AGG | + | chr4_4:36574814-36574833 | Msa0679110:CDS | 55.0% | |
| ! | TAGCGGAGGTGCAAGCATGG+TGG | + | chr4_4:36572903-36572922 | Msa0679110:CDS | 60.0% |
| !! | TTTGTCGAACGCGGTGCTGC+TGG | + | chr4_4:36573415-36573434 | Msa0679110:CDS | 60.0% |
| !! | TTGTCGAACGCGGTGCTGCT+GGG | + | chr4_4:36573416-36573435 | Msa0679110:CDS | 60.0% |
| ! | TAGCGGAGGTGCAAGCATGG+TGG | + | chr4_4:36572903-36572922 | Msa0679110:CDS | 60.0% |
| !! | TTTGTCGAACGCGGTGCTGC+TGG | + | chr4_4:36573415-36573434 | Msa0679110:CDS | 60.0% |
| !! | TTGTCGAACGCGGTGCTGCT+GGG | + | chr4_4:36573416-36573435 | Msa0679110:CDS | 60.0% |
| CGGTTGACGCAACACCACCC+TGG | - | chr4_4:36574437-36574456 | None:intergenic | 65.0% | |
| CGGTTGACGCAACACCACCC+TGG | - | chr4_4:36574437-36574456 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 36572872 | 36574847 | 36572872 | ID=Msa0679110;Name=Msa0679110 |
| chr4_4 | mRNA | 36572872 | 36574847 | 36572872 | ID=Msa0679110-mRNA-1;Parent=Msa0679110;Name=Msa0679110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|566 |
| chr4_4 | exon | 36572872 | 36574471 | 36572872 | ID=Msa0679110-mRNA-1:exon:8565;Parent=Msa0679110-mRNA-1 |
| chr4_4 | exon | 36574747 | 36574847 | 36574747 | ID=Msa0679110-mRNA-1:exon:8566;Parent=Msa0679110-mRNA-1 |
| chr4_4 | CDS | 36572872 | 36574471 | 36572872 | ID=Msa0679110-mRNA-1:cds;Parent=Msa0679110-mRNA-1 |
| chr4_4 | CDS | 36574747 | 36574847 | 36574747 | ID=Msa0679110-mRNA-1:cds;Parent=Msa0679110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
