AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0681350


Find 406 sgRNAs with CRISPR-Local

Find 675 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr4_4 gene 41685934 41695341 41685934 ID=Msa0681350;Name=Msa0681350
chr4_4 mRNA 41685934 41695341 41685934 ID=Msa0681350-mRNA-1;Parent=Msa0681350;Name=Msa0681350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.77|0.7|1|1|1|10|721|1602
chr4_4 exon 41685934 41686228 41685934 ID=Msa0681350-mRNA-1:exon:9930;Parent=Msa0681350-mRNA-1
chr4_4 exon 41686454 41686733 41686454 ID=Msa0681350-mRNA-1:exon:9931;Parent=Msa0681350-mRNA-1
chr4_4 exon 41686918 41687646 41686918 ID=Msa0681350-mRNA-1:exon:9932;Parent=Msa0681350-mRNA-1
chr4_4 exon 41687810 41689025 41687810 ID=Msa0681350-mRNA-1:exon:9933;Parent=Msa0681350-mRNA-1
chr4_4 exon 41691373 41691655 41691373 ID=Msa0681350-mRNA-1:exon:9934;Parent=Msa0681350-mRNA-1
chr4_4 exon 41692051 41692175 41692051 ID=Msa0681350-mRNA-1:exon:9935;Parent=Msa0681350-mRNA-1
chr4_4 exon 41692262 41692716 41692262 ID=Msa0681350-mRNA-1:exon:9936;Parent=Msa0681350-mRNA-1
chr4_4 exon 41692810 41692838 41692810 ID=Msa0681350-mRNA-1:exon:9937;Parent=Msa0681350-mRNA-1
chr4_4 exon 41693135 41693686 41693135 ID=Msa0681350-mRNA-1:exon:9938;Parent=Msa0681350-mRNA-1
chr4_4 exon 41693776 41695341 41693776 ID=Msa0681350-mRNA-1:exon:9939;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41685934 41686228 41685934 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41686454 41686733 41686454 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41686918 41687646 41686918 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41687810 41689025 41687810 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41691373 41691655 41691373 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41692051 41692175 41692051 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41692262 41692716 41692262 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41692810 41692838 41692810 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41693135 41693686 41693135 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 CDS 41693776 41694620 41693776 ID=Msa0681350-mRNA-1:cds;Parent=Msa0681350-mRNA-1
chr4_4 three_prime_UTR 41694621 41695341 41694621 ID=Msa0681350-mRNA-1:three_prime_utr;Parent=Msa0681350-mRNA-1
Gene Sequence

>Msa0681350

ATGGAGAAGGGTGGTGGGAAACCGAGGGGTCGTCCGAGGAAACGACGAAAGGAGGACGAAGAGAAGAAGGAAGGGAAATTGGTTAATGAAGCTAAGAGGCAAGCAGTTGAGACGAAACCGATTCCGTTGGTTGGGAGGTATGTGCTGAAAGAGTTTCCTAGAAACGGTGTTTTTCTAGGTAAAGTTGTGTATTATGAAAGTGGTTTATACAGGGTTAATTATGAAGACGGTGATTTTGAAGATTTAGAGAGTGTTGAAATTCGTCCGATACTTGTCAGGGACGATAGTTTTGATGTGCCTTTGCCTCCACCATTGCATTTGCCGCCATCGTCCGGAACTATTGGTGTGCCTGAGCCGAGTGTCTCACACCTCCTATCTGTGTATGGGTTTTTGAGATCGTTCAGCACCCGATTGTTTCTTCATCCTTTTACTTTGGATGATTTTGTTGGTGCCCTGAATTATCAAGGGCCAAGCACTTTGTTTGACGCAATTCATCTTTCTCTGATGCGGGTGTTGAGGCGTCATCTTGAAAGCCTGTCATCTGAGGGGTTTGAGCTTGCATCACAATGTCTTAGGTGCAACGATTGGAGCTTGCTCGATACGTTGACTTGGTCCGTTTTTGTGATTCTATATTTGGTGGTCAATGGGTACACAAAAGGACCTGAATGGAAAGGATTTTATGATGAGTTTTTTAGCAGCGAGTATTATTTGTTGCCTGTAAGTAGGAAGTTAATGATTCTGCAAATTCTTTGTGATGATGTTTTGGAATCTGAGGAGCTAAAAACTGAAATGAACACGCGAAAGGAATCAGAGGTCGGGATGGATGATGATGCAGAAGATATCGTTCCTGCAGAAACTGGCCCCAGAAAAGTCTATCCAAGATATACCAGGACCTCTTTTTGTGAGGATAAAGAAGCTGTGAAATTGGTTTCAGCATCAAATGCTGGTACAGAAACCACTGGGGATGGAGATGTTGATAGAAATGGAGATGAATGTCGCCTCTGCGGTATGGACGGAACCCTTATTTGTTGTGACGGTTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGATGAAAATGTTTATACCAGAAGGGCCATGGTATTGTCCAGAGTGCAAAATTGATATGGCTGGGCCTACAATTGCAAAGGGAACCTCACTTAGAGGGGCTGAAGTATTTGGGAAGGATTTGTATGGGCAGCTCTTCATGGGTACATGCGACCACTTACTTGTGTATGTTCAACATCTTTCTGGTGTTACATTTGCCCTTTCATTTGCTATGCTAGGATCAGTACTGGTGCTGCTTAACTTTGAGAACAATGAAGTTTGTCTTAGATATTACAATCAGAAGGACATCCCTAAAGTTGTCCAAGTGCTTTATGAATCCATGCTGCATAGGCCAATGTACCATGGTATTTGCATGGCAGTTTTACAATATTGGAATATTTCAGAAAACTTCTTACCTCTTTGTGCTTCAATTGAAACAAATTTAAAGGATGAGACAAAATTTTCTTCCCCTTTACGTCCTCCTTCAAGTGAAGACAACCATACACCTGTTAGTTTGGTCAAGGTAGAGAACTCTCCAACCACTGCGAGTTTGATTCCCAATGATAATATGGTGCCTTCTCTTGATGCTTTGCAAATTATCCCTCAAAGTCTTGCTTTTAATAGCAGTGGCATTGATAGAAGTGAAGAGGGCCTTATTGTAAATAAGAAGCTTTCTGAGGAAATTAAGACGGAGGCAATAATTTCAGCTGGTTCTGTTAGTCATCCATCCGACATGAACTTTCAGAATTCTGTCAATATGTCAACTGCAGTAGATGCTGCTAAGTACTCTGTGGTAAACAGTCAATCAAGTAATTGTGGCCATGCAAATGATATGGAGTTGCCTTCAAATTTTTCTTTGCAAAACAAAGAAAACACCCAAGTAGGTTTTGGAAAGTGTGAACGCACTGCAAGTGATGATTTTTGTTACATGGGTTTCTCCTTTAAACCCATGTCGTACATAAATTACTATATGCATGGTGAATTTTCTGCATCAGCAGCTGCCAAATTTGCATCTGATTCTTCAGAGGAGTCTAAGCCAGAGGGTCATGCGTCAGACAGCCAGAAGAAAACATTATCTGCATACACTTATTTGCAAGCAAAATCATTCTCCCAAGTAGCTTCACGTTTCTTTTGGCCCAGTTCAGAAAAGAAGCTTGTGGATGTTCCAAGAGAGAGGTGTGGTTGGTGTCTTTCCTGTAAAGCCAATGTTGTTAGCAAGAGAGGGTGCATGTTAAATCAGTCTCTTATAATTGCCACAAAAAGTGCTATGAAAACCCTTGCTATATTACCTCCTTTAAGGAATGGAGAGGGAATTCTTCCTAGTACCATTGCAACTTACATTTTATATATGGAGAGATGTTTGCATGGTTTAGTCGTTGGACCCTTCGTAAATGCAAGCTATAGAGAGAACTGGCGTGAGCAAGTTAAACAAGCCACAACATTTAGTGCTATCAAGCCACTTCTACTTAAACTTGAGGAGAACATTCGAATCGTTGCTTTTTGTGGGGACTGGGTTAAGCTGACGGATGATCACTTAGTTGAATTTTCCAACATCAAAAGTGCCACATCTACTCAAGGAACAACTCAGAAACGTGCACCAAGTGGAAGGCGTTCTAAAAAGAGGTCATATAGTGATGAAGCTACAGATGATGGTTCCAAGGAAAGTATGTGGTGGCGCGGTGGAAGGTTTTCAAGATTTATATCTCAGAATATAACTGTGCCCAAATCAATGGTCCGAAAAGCAGCTCGCCAAGGTGGTTCGAGGAAAATTTCTGGTATATTCTATGCTGATGAATCTGAAATTCCCAAAAGAAGTAGACAGCTTGTCTGGAGAGTCGCAGTTGAAATGAGTAGGAATGCCTCACAGCTGGCACTCCAGGTCAGATATCTAGATTTTTATCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACACACAGGACGGGAAAGGCCAAGAGACCGAAGCTTCTGCTTTCCGAAATGCAAACATTTGTGACAAAAAACTTGTACAGGGAAAAATTTGTTACGGGATAATTTTTGGGAGCCAAAAGCATCTTCCTATTCGGGTGATGAAAAGTGCTGTTGAAACAGAGCAAGGGCCGGAAGGAAGAGAAAAGTATTGGTTTTTTGAAAATCGCATTCCTTTATATTTGGTAAAAGAGTATGAAGAAGGTAATGAAAAGGCTCCATGTGAAGAGTACTATAGTGGTACATATCAGTTACACAGAAGGCAGTTGAAATGTTCCTGCAATGACATATTCTTTTACCTCATTTGCAAGAGAGACAACTTGGCATACTCGTGTTCTTCATGTCAGATGGCCATTTCAATTCGGTATGCTCACAAGTGCAATGCATGTCAAGGTTATTGTCACAAGGACTGTTCCATAAGTTCAGTCTCTAGACTCTCTACAAAAGGGGGAGTTGAATGCTTGACAACATGCAAACAATGTCACCATGCCAAGTTACTTGCTCCAAACATAACTAGTGATGAATCTCCAACAAGTCCCTTAATCTTACAAGGACAGGAAAACAGCTCTGGGACTAGTTTTAAGGGAGCAAGGCCAAAGACCAGTCATTCTGATATGAAACAAGTTAACTCCAAGTCAGTTTCGAAAGGATCAAAGCGTAAATGTCAGGATCAAACTTTGACTTCTACCAGGAAAAAGAATGGTCATCCTGAGACAAAACTAGTCGAGTCTGATTCCACTTCGGCATCAATCAACCGTCGCAACAATAATTGTTCTTGGGGTGTTATCTGGAAAAAGAAAATGAACGAAGATAACTTTAATTTTGTGATCAAAAACATACTTTTCAGGGGAGCGTCAGACATACCTGATTCGGGACCTACTTGTCACTTGTGTGGAAAGGCATATAGGTCGGATCTAATGTATATTTGCTGCGAAACATGCCAAAATTGGTTTCATGCTGAAGCTGTTGAACTTGAAGAATCCCAAATTTCGGCCATGTTGGGCTTTAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTCTGATTCAAAACCTAAGTCAGAAGTTAAGAAACCACGCAAAAGGACTGTAAAGAAAGAACATTCTGGAGCCAATTCTGATTCTGGAACATTTAATGATACGAGGGAGTGTGAACCTGCTACTCCTGTCTATCCTGTGGGAAATGATCATTTAACTTACTCCCTTGAAAATGTTGAGCTGATTACAGAGCGTAATAAATTAGATTCGGATGTCGAGTGGAACACTGTTTCTGTGCCAGGGCCTCGGAAATTACCAGTGAGAAGGCATGTTAAGCATGAAGGGGATGACGATGGTTCTGTTGCAGGAATTCCTTTACAAGCTGAATTTCCAACATACAGTGAAGCAAGTTATCTGTCCAATCCAGCAGATTCAACATTACCTTTAGAATACGACCCTACTGCTTTTGACAGCAATCTGATGATTGATTTTGAAGACAATAACAATACCATCTTCGATACAAATGAACTTCTGCGCTCAGATGATGACGGCCAGATTGGTGGAGTTGATTTGTCCGGGGAATTGTTGGAATATGATTTTGACAATTTTGACACCGCTAATCTTGAAGAATTTGGAGATGGTAGTTTTAGTTGTTGTGTATGTCTTCAAGGTGAACCAGGCCCTGATCTTTTTTGTGAGACTTGCGGGACTTTGATGCACAGCCATTGTTTGCCTCCTTGGCATGAACCAATTTCTGATCCGGAACATTGGAGGTGTCTGACTTGCCGGGATTGGCAATAA

Protein sequence

>Msa0681350

MEKGGGKPRGRPRKRRKEDEEKKEGKLVNEAKRQAVETKPIPLVGRYVLKEFPRNGVFLGKVVYYESGLYRVNYEDGDFEDLESVEIRPILVRDDSFDVPLPPPLHLPPSSGTIGVPEPSVSHLLSVYGFLRSFSTRLFLHPFTLDDFVGALNYQGPSTLFDAIHLSLMRVLRRHLESLSSEGFELASQCLRCNDWSLLDTLTWSVFVILYLVVNGYTKGPEWKGFYDEFFSSEYYLLPVSRKLMILQILCDDVLESEELKTEMNTRKESEVGMDDDAEDIVPAETGPRKVYPRYTRTSFCEDKEAVKLVSASNAGTETTGDGDVDRNGDECRLCGMDGTLICCDGCPSAYHSRCIGVMKMFIPEGPWYCPECKIDMAGPTIAKGTSLRGAEVFGKDLYGQLFMGTCDHLLVYVQHLSGVTFALSFAMLGSVLVLLNFENNEVCLRYYNQKDIPKVVQVLYESMLHRPMYHGICMAVLQYWNISENFLPLCASIETNLKDETKFSSPLRPPSSEDNHTPVSLVKVENSPTTASLIPNDNMVPSLDALQIIPQSLAFNSSGIDRSEEGLIVNKKLSEEIKTEAIISAGSVSHPSDMNFQNSVNMSTAVDAAKYSVVNSQSSNCGHANDMELPSNFSLQNKENTQVGFGKCERTASDDFCYMGFSFKPMSYINYYMHGEFSASAAAKFASDSSEESKPEGHASDSQKKTLSAYTYLQAKSFSQVASRFFWPSSEKKLVDVPRERCGWCLSCKANVVSKRGCMLNQSLIIATKSAMKTLAILPPLRNGEGILPSTIATYILYMERCLHGLVVGPFVNASYRENWREQVKQATTFSAIKPLLLKLEENIRIVAFCGDWVKLTDDHLVEFSNIKSATSTQGTTQKRAPSGRRSKKRSYSDEATDDGSKESMWWRGGRFSRFISQNITVPKSMVRKAARQGGSRKISGIFYADESEIPKRSRQLVWRVAVEMSRNASQLALQVRYLDFYLRWSDLIRPEQNTQDGKGQETEASAFRNANICDKKLVQGKICYGIIFGSQKHLPIRVMKSAVETEQGPEGREKYWFFENRIPLYLVKEYEEGNEKAPCEEYYSGTYQLHRRQLKCSCNDIFFYLICKRDNLAYSCSSCQMAISIRYAHKCNACQGYCHKDCSISSVSRLSTKGGVECLTTCKQCHHAKLLAPNITSDESPTSPLILQGQENSSGTSFKGARPKTSHSDMKQVNSKSVSKGSKRKCQDQTLTSTRKKNGHPETKLVESDSTSASINRRNNNCSWGVIWKKKMNEDNFNFVIKNILFRGASDIPDSGPTCHLCGKAYRSDLMYICCETCQNWFHAEAVELEESQISAMLGFKCCKCRRIKSPVCPYSDSKPKSEVKKPRKRTVKKEHSGANSDSGTFNDTRECEPATPVYPVGNDHLTYSLENVELITERNKLDSDVEWNTVSVPGPRKLPVRRHVKHEGDDDGSVAGIPLQAEFPTYSEASYLSNPADSTLPLEYDPTAFDSNLMIDFEDNNNTIFDTNELLRSDDDGQIGGVDLSGELLEYDFDNFDTANLEEFGDGSFSCCVCLQGEPGPDLFCETCGTLMHSHCLPPWHEPISDPEHWRCLTCRDWQ*