Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367740 | XP_003600629.1 | 98.593 | 1066 | 15 | 0 | 1 | 1066 | 1 | 1066 | 0.0 | 2171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367740 | sp|O82491|SPT16_ARATH | 71.185 | 1055 | 297 | 7 | 1 | 1052 | 1 | 1051 | 0.0 | 1521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367740 | G7J7Y6 | 98.593 | 1066 | 15 | 0 | 1 | 1066 | 1 | 1066 | 0.0 | 2171 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0367740 | 0.850769 | 1.370173e-60 | -8.615850e-47 |
| Msa0003270 | Msa0367740 | 0.810453 | 1.144095e-50 | -8.615850e-47 |
| Msa0005620 | Msa0367740 | 0.802449 | 5.580516e-49 | -8.615850e-47 |
| Msa0010770 | Msa0367740 | 0.838704 | 2.455265e-57 | -8.615850e-47 |
| Msa0022750 | Msa0367740 | -0.837897 | 3.964196e-57 | -8.615850e-47 |
| Msa0037120 | Msa0367740 | 0.852827 | 3.574249e-61 | -8.615850e-47 |
| Msa0039250 | Msa0367740 | 0.803331 | 3.668919e-49 | -8.615850e-47 |
| Msa0045340 | Msa0367740 | 0.851293 | 9.753015e-61 | -8.615850e-47 |
| Msa0054820 | Msa0367740 | 0.847650 | 1.011307e-59 | -8.615850e-47 |
| Msa0055600 | Msa0367740 | 0.821396 | 4.127790e-53 | -8.615850e-47 |
| Msa0055660 | Msa0367740 | 0.830692 | 2.544397e-55 | -8.615850e-47 |
| Msa0084340 | Msa0367740 | 0.852273 | 5.142864e-61 | -8.615850e-47 |
| Msa0091780 | Msa0367740 | 0.807938 | 3.958279e-50 | -8.615850e-47 |
| Msa0092440 | Msa0367740 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa0096580 | Msa0367740 | 0.842303 | 2.807223e-58 | -8.615850e-47 |
| Msa0100160 | Msa0367740 | 0.834500 | 2.892002e-56 | -8.615850e-47 |
| Msa0115560 | Msa0367740 | 0.818592 | 1.809104e-52 | -8.615850e-47 |
| Msa0131290 | Msa0367740 | 0.839967 | 1.154063e-57 | -8.615850e-47 |
| Msa0131700 | Msa0367740 | 0.806447 | 8.191328e-50 | -8.615850e-47 |
| Msa0138210 | Msa0367740 | 0.821525 | 3.855277e-53 | -8.615850e-47 |
| Msa0138950 | Msa0367740 | 0.818370 | 2.030987e-52 | -8.615850e-47 |
| Msa0144780 | Msa0367740 | 0.839709 | 1.347326e-57 | -8.615850e-47 |
| Msa0176830 | Msa0367740 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0177170 | Msa0367740 | 0.844997 | 5.343136e-59 | -8.615850e-47 |
| Msa0179000 | Msa0367740 | 0.810456 | 1.142663e-50 | -8.615850e-47 |
| Msa0183420 | Msa0367740 | 0.839490 | 1.536222e-57 | -8.615850e-47 |
| Msa0204250 | Msa0367740 | 0.821182 | 4.624892e-53 | -8.615850e-47 |
| Msa0210260 | Msa0367740 | 0.805973 | 1.030583e-49 | -8.615850e-47 |
| Msa0227230 | Msa0367740 | 0.843341 | 1.487101e-58 | -8.615850e-47 |
| Msa0236770 | Msa0367740 | 0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0237200 | Msa0367740 | 0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0367740 | Msa0377440 | 0.844507 | 7.241710e-59 | -8.615850e-47 |
| Msa0367740 | Msa0390960 | 0.818932 | 1.514439e-52 | -8.615850e-47 |
| Msa0367740 | Msa0415530 | 0.948157 | 1.645145e-106 | -8.615850e-47 |
| Msa0367740 | Msa0417650 | 0.819229 | 1.295899e-52 | -8.615850e-47 |
| Msa0367740 | Msa0423840 | 0.818711 | 1.699476e-52 | -8.615850e-47 |
| Msa0367740 | Msa0432170 | 0.825805 | 3.837604e-54 | -8.615850e-47 |
| Msa0367740 | Msa0450360 | 0.829257 | 5.695925e-55 | -8.615850e-47 |
| Msa0367740 | Msa0460700 | 0.929170 | 1.019546e-92 | -8.615850e-47 |
| Msa0367740 | Msa0480780 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
| Msa0367740 | Msa0510990 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa0367740 | Msa0517650 | 0.848098 | 7.608857e-60 | -8.615850e-47 |
| Msa0367740 | Msa0521020 | 0.814456 | 1.526918e-51 | -8.615850e-47 |
| Msa0367740 | Msa0549280 | 0.842704 | 2.197981e-58 | -8.615850e-47 |
| Msa0367740 | Msa0580640 | 0.819351 | 1.215626e-52 | -8.615850e-47 |
| Msa0367740 | Msa0628500 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0367740 | Msa0629430 | 0.830209 | 3.340878e-55 | -8.615850e-47 |
| Msa0367740 | Msa0642250 | 0.852798 | 3.643015e-61 | -8.615850e-47 |
| Msa0367740 | Msa0652690 | 0.802595 | 5.206624e-49 | -8.615850e-47 |
| Msa0367740 | Msa0681350 | 0.829240 | 5.749108e-55 | -8.615850e-47 |
| Msa0367740 | Msa0687450 | 0.805607 | 1.230489e-49 | -8.615850e-47 |
| Msa0367740 | Msa0689760 | 0.833664 | 4.684668e-56 | -8.615850e-47 |
| Msa0367740 | Msa0702570 | 0.811432 | 7.023406e-51 | -8.615850e-47 |
| Msa0367740 | Msa0710270 | 0.803214 | 3.878473e-49 | -8.615850e-47 |
| Msa0367740 | Msa0716860 | 0.829745 | 4.333691e-55 | -8.615850e-47 |
| Msa0367740 | Msa0757800 | 0.816787 | 4.619183e-52 | -8.615850e-47 |
| Msa0367740 | Msa0836500 | 0.804666 | 1.936314e-49 | -8.615850e-47 |
| Msa0367740 | Msa0896240 | 0.828516 | 8.607984e-55 | -8.615850e-47 |
| Msa0367740 | Msa0909770 | 0.832739 | 7.959603e-56 | -8.615850e-47 |
| Msa0367740 | Msa0937430 | 0.804539 | 2.058333e-49 | -8.615850e-47 |
| Msa0367740 | Msa0944660 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0367740 | Msa0945240 | 0.806019 | 1.007768e-49 | -8.615850e-47 |
| Msa0367740 | Msa0981310 | 0.820395 | 7.016075e-53 | -8.615850e-47 |
| Msa0367740 | Msa0982240 | 0.800309 | 1.530840e-48 | -8.615850e-47 |
| Msa0367740 | Msa1010070 | 0.839294 | 1.727251e-57 | -8.615850e-47 |
| Msa0367740 | Msa1079860 | 0.803197 | 3.910046e-49 | -8.615850e-47 |
| Msa0367740 | Msa1127270 | 0.812745 | 3.631895e-51 | -8.615850e-47 |
| Msa0367740 | Msa1127430 | 0.814536 | 1.465495e-51 | -8.615850e-47 |
| Msa0367740 | Msa1143710 | 0.821026 | 5.024365e-53 | -8.615850e-47 |
| Msa0367740 | Msa1214160 | 0.824201 | 9.175315e-54 | -8.615850e-47 |
| Msa0367740 | Msa1214320 | 0.802622 | 5.141634e-49 | -8.615850e-47 |
| Msa0367740 | Msa1224830 | 0.814168 | 1.767130e-51 | -8.615850e-47 |
| Msa0367740 | Msa1227320 | 0.841756 | 3.918081e-58 | -8.615850e-47 |
| Msa0367740 | Msa1265720 | 0.801423 | 9.069244e-49 | -8.615850e-47 |
| Msa0367740 | Msa1319340 | 0.812945 | 3.283012e-51 | -8.615850e-47 |
| Msa0367740 | Msa1333730 | 0.815799 | 7.680607e-52 | -8.615850e-47 |
| Msa0367740 | Msa1336040 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0367740 | Msa1359560 | 0.821333 | 4.268243e-53 | -8.615850e-47 |
| Msa0367740 | Msa1393820 | 0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0367740 | Msa1418260 | 0.806737 | 7.112031e-50 | -8.615850e-47 |
| Msa0367740 | Msa1420250 | 0.832597 | 8.633914e-56 | -8.615850e-47 |
| Msa0367740 | Msa1426910 | 0.806682 | 7.305544e-50 | -8.615850e-47 |
| Msa0367740 | Msa1431170 | 0.800789 | 1.221981e-48 | -8.615850e-47 |
| Msa0367740 | Msa1435260 | 0.807090 | 5.988561e-50 | -8.615850e-47 |
| Msa0367740 | Msa1438320 | 0.802305 | 5.975909e-49 | -8.615850e-47 |
| Msa0367740 | Msa1438520 | 0.848638 | 5.393703e-60 | -8.615850e-47 |
| Msa0367740 | Msa1444400 | 0.809842 | 1.549225e-50 | -8.615850e-47 |
| Msa0367740 | Msa1447150 | 0.806822 | 6.825243e-50 | -8.615850e-47 |
| Msa0245940 | Msa0367740 | 0.811389 | 7.175408e-51 | -8.615850e-47 |
| Msa0269520 | Msa0367740 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
| Msa0274970 | Msa0367740 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa0279390 | Msa0367740 | 0.816935 | 4.277722e-52 | -8.615850e-47 |
| Msa0301810 | Msa0367740 | 0.829277 | 5.632969e-55 | -8.615850e-47 |
| Msa0307860 | Msa0367740 | 0.803008 | 4.278168e-49 | -8.615850e-47 |
| Msa0315680 | Msa0367740 | 0.803818 | 2.907049e-49 | -8.615850e-47 |
| Msa0318880 | Msa0367740 | 0.831264 | 1.841894e-55 | -8.615850e-47 |
| Msa0322590 | Msa0367740 | 0.802170 | 6.371533e-49 | -8.615850e-47 |
| Msa0343190 | Msa0367740 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0347950 | Msa0367740 | 0.818253 | 2.158880e-52 | -8.615850e-47 |
| Msa0347990 | Msa0367740 | 0.824540 | 7.637439e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367740 | MtrunA17_Chr3g0109751 | 98.593 | 1066 | 15 | 0 | 1 | 1066 | 1 | 1066 | 0.0 | 2171 |
| Msa0367740 | MtrunA17_Chr6g0452341 | 91.760 | 1068 | 76 | 4 | 1 | 1066 | 1 | 1058 | 0.0 | 1917 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367740 | AT4G10710.2 | 71.185 | 1055 | 297 | 7 | 1 | 1052 | 1 | 1051 | 0.0 | 1521 |
| Msa0367740 | AT4G10710.1 | 71.185 | 1055 | 297 | 7 | 1 | 1052 | 1 | 1051 | 0.0 | 1521 |
| Msa0367740 | AT4G10710.3 | 75.237 | 739 | 177 | 6 | 316 | 1052 | 10 | 744 | 0.0 | 1098 |
| Msa0367740 | AT4G10670.1 | 69.886 | 352 | 96 | 5 | 554 | 904 | 1 | 343 | 8.97e-172 | 507 |
Find 267 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACATGACAATCATCTTTA+AGG | 0.088915 | 3_1:-63622078 | Msa0367740:CDS |
| AAGGAAAATTGCTTGATTTA+TGG | 0.112517 | 3_1:-63624224 | Msa0367740:CDS |
| GTGAAGACCATTATTGTTTC+TGG | 0.116002 | 3_1:+63624474 | None:intergenic |
| TGGGGACAACCACAATTTAA+TGG | 0.219173 | 3_1:-63622290 | Msa0367740:CDS |
| CTTTGGATCCGCCCTCCTTT+TGG | 0.222506 | 3_1:-63622680 | Msa0367740:CDS |
| GGAACCATACTTCCGTTAAT+TGG | 0.229099 | 3_1:+63623025 | None:intergenic |
| AGGAAAATTGCTTGATTTAT+GGG | 0.258159 | 3_1:-63624223 | Msa0367740:CDS |
| TCCTCTTCAGAGTCTGATTC+AGG | 0.274402 | 3_1:+63621792 | None:intergenic |
| CTGTGATCAGCCTTTGATTT+AGG | 0.285367 | 3_1:+63623322 | None:intergenic |
| AAAGCCCATGAGGCGGTTAT+TGG | 0.285627 | 3_1:-63623721 | Msa0367740:CDS |
| CTTACCAATTAACGGAAGTA+TGG | 0.288492 | 3_1:-63623029 | Msa0367740:CDS |
| AGAACAGGGCAGTAGATTTC+AGG | 0.295049 | 3_1:+63624520 | None:intergenic |
| GAAGAATGCATGTTTAATAT+TGG | 0.302339 | 3_1:+63622559 | None:intergenic |
| GCCCTGTTCTTGTGGATGCT+TGG | 0.304413 | 3_1:-63624507 | Msa0367740:CDS |
| TTCCAGGTCTTCTGCAGAAC+TGG | 0.304577 | 3_1:-63623131 | Msa0367740:CDS |
| TCATCTGCACAACCATATTA+TGG | 0.305128 | 3_1:-63622498 | Msa0367740:CDS |
| TGAATCGGGTAAATGATCTT+TGG | 0.308578 | 3_1:-63622310 | Msa0367740:CDS |
| TCTTCCCGCCTCCAACATTC+TGG | 0.316659 | 3_1:+63622420 | None:intergenic |
| TGTTCTTCTTCAAGCTCATC+AGG | 0.321304 | 3_1:+63622383 | None:intergenic |
| GCAGCACTCAATTTGTTTCC+AGG | 0.322686 | 3_1:+63623688 | None:intergenic |
| ACTTATGTGCCTTGAATCCT+TGG | 0.333522 | 3_1:+63622841 | None:intergenic |
| TGATGATGGAGCTTCTCTTA+TGG | 0.339287 | 3_1:-63624334 | Msa0367740:CDS |
| CAAGAATAGATGCCTTCTTT+TGG | 0.342506 | 3_1:+63624424 | None:intergenic |
| GAATCGGGTAAATGATCTTT+GGG | 0.343377 | 3_1:-63622309 | Msa0367740:CDS |
| AGCCACATCTGTTAAAGCTT+TGG | 0.347961 | 3_1:+63623378 | None:intergenic |
| GTGGAGGGAAGTTTGATCTT+AGG | 0.349600 | 3_1:-63623903 | Msa0367740:CDS |
| ATCCCTTCTACATCACTTGA+TGG | 0.351532 | 3_1:-63622023 | Msa0367740:CDS |
| TAGCAAGCTGCAGTTTCTCC+TGG | 0.351870 | 3_1:+63622735 | None:intergenic |
| TCCTGCTTGACAAAGTCTGC+TGG | 0.361921 | 3_1:-63623616 | Msa0367740:CDS |
| ATCCAAGCATCCACAAGAAC+AGG | 0.363760 | 3_1:+63624505 | None:intergenic |
| CTCTTGAGGCTCATGTGAAT+GGG | 0.365352 | 3_1:-63622631 | Msa0367740:CDS |
| GGTCATCTGTGATTGTCTTC+AGG | 0.375295 | 3_1:+63621928 | None:intergenic |
| GAGAGCTGAGAGAGCAACTT+TGG | 0.377478 | 3_1:-63622762 | Msa0367740:CDS |
| GGTATTGAGTTTCGAGAGTC+TGG | 0.379234 | 3_1:-63623583 | Msa0367740:CDS |
| TTAGATGGCCTCGTGGCCTT+TGG | 0.380748 | 3_1:+63621580 | None:intergenic |
| TCGGCATGCTACTGCTTAGA+TGG | 0.382597 | 3_1:+63621565 | None:intergenic |
| ACCATGGCAGACCATCAAAA+TGG | 0.383296 | 3_1:-63624726 | Msa0367740:CDS |
| ATTTCAAAGCTTTGTGAATC+GGG | 0.383390 | 3_1:-63622324 | Msa0367740:CDS |
| GATACAACCGTTCCTCTTCC+AGG | 0.385090 | 3_1:-63623147 | Msa0367740:CDS |
| GAGGTATGCAGCTCTCTTAA+TGG | 0.385795 | 3_1:+63624107 | None:intergenic |
| ACTCTTGAGGCTCATGTGAA+TGG | 0.385873 | 3_1:-63622632 | Msa0367740:CDS |
| TCATAAGCCTTGCTTTGAAT+AGG | 0.393028 | 3_1:+63623754 | None:intergenic |
| GGGAAGCAAGCAATGCAGAT+AGG | 0.393150 | 3_1:-63621662 | Msa0367740:CDS |
| AATCTGAATCATCATCTCTC+TGG | 0.396682 | 3_1:+63623075 | None:intergenic |
| CAAAGGTCAGGCAATCTTAT+CGG | 0.398432 | 3_1:+63622698 | None:intergenic |
| CGATAAGATTGCCTGACCTT+TGG | 0.400151 | 3_1:-63622697 | Msa0367740:CDS |
| TATTCAAAGCAAGGCTTATG+AGG | 0.400674 | 3_1:-63623752 | Msa0367740:CDS |
| TGAGATTGAGATTGTGAATC+TGG | 0.401650 | 3_1:-63622129 | Msa0367740:CDS |
| CTTAGAGAACTTGGCTTCCC+CGG | 0.402454 | 3_1:-63622242 | Msa0367740:CDS |
| ATGCCATCAAGTGATGTAGA+AGG | 0.405065 | 3_1:+63622020 | None:intergenic |
| AAGGTCGTTTATGTTCTTGT+AGG | 0.408599 | 3_1:+63623105 | None:intergenic |
| TGAAGACCATTATTGTTTCT+GGG | 0.413314 | 3_1:+63624475 | None:intergenic |
| GAAACTGCTAGGCGGCTTGC+TGG | 0.416847 | 3_1:-63623187 | Msa0367740:CDS |
| ATGAAAGCAGGACAGATCTC+TGG | 0.417676 | 3_1:-63624599 | Msa0367740:CDS |
| AACCATAATCTATCTTAACT+TGG | 0.425659 | 3_1:+63621536 | None:intergenic |
| GCTTCATTGAAGGTGGTGGC+TGG | 0.426732 | 3_1:-63621899 | Msa0367740:CDS |
| AATTTCAAAGCTTTGTGAAT+CGG | 0.427983 | 3_1:-63622325 | Msa0367740:CDS |
| CCAAGGATCTATTTATTTGA+AGG | 0.428187 | 3_1:-63622879 | Msa0367740:CDS |
| CTCCACACCAACTGACTCTC+TGG | 0.432571 | 3_1:+63624383 | None:intergenic |
| AGTCGGACAGTGAGGAAGAT+AGG | 0.432948 | 3_1:-63621626 | Msa0367740:CDS |
| TATCTTAACTTGGGCCGCTT+CGG | 0.435139 | 3_1:+63621546 | None:intergenic |
| CACCTTCAATGAAGCTTTGA+GGG | 0.435984 | 3_1:+63621907 | None:intergenic |
| GGCTCAGAGGAATCTGATAA+AGG | 0.439492 | 3_1:-63621837 | Msa0367740:CDS |
| GTTATTGGTTCTTTAAAGCC+TGG | 0.441563 | 3_1:-63623706 | Msa0367740:CDS |
| TTAGAGAACTTGGCTTCCCC+GGG | 0.443606 | 3_1:-63622241 | Msa0367740:CDS |
| GCGGTTCTCTTACCAATTAA+CGG | 0.444770 | 3_1:-63623037 | Msa0367740:CDS |
| CGTTCCGCTCCAAGGATTCA+AGG | 0.445173 | 3_1:-63622850 | Msa0367740:CDS |
| AATGGAAAAGCTAGTGCAGC+TGG | 0.449250 | 3_1:-63624687 | Msa0367740:CDS |
| GTCAAGCAGGAAACCATGTC+AGG | 0.453767 | 3_1:+63623628 | None:intergenic |
| CCTTCAAATAAATAGATCCT+TGG | 0.455049 | 3_1:+63622879 | None:intergenic |
| GATCAACCTCTTAGAGAACT+TGG | 0.462116 | 3_1:-63622251 | Msa0367740:CDS |
| ACAATTTAATGGCCTTGACT+TGG | 0.466622 | 3_1:-63622279 | Msa0367740:CDS |
| TGCAGTTTCTGTTGTTGAAA+AGG | 0.470732 | 3_1:-63623656 | Msa0367740:CDS |
| GCTAGGCGGCTTGCTGGTGG+CGG | 0.472338 | 3_1:-63623181 | Msa0367740:CDS |
| GGAACTCCGGAGACAGCATC+AGG | 0.474356 | 3_1:-63623236 | Msa0367740:CDS |
| ATCTAAGTGATGTGGCCAAT+GGG | 0.475775 | 3_1:-63624173 | Msa0367740:CDS |
| TTTCAATGAGGATGAGGAAG+AGG | 0.477971 | 3_1:-63623350 | Msa0367740:CDS |
| AACATAAAACTGAACATCCT+TGG | 0.478100 | 3_1:+63622460 | None:intergenic |
| GGAAGCAAGCAATGCAGATA+GGG | 0.478405 | 3_1:-63621661 | Msa0367740:CDS |
| TGAGTTCCCAGAAACAATAA+TGG | 0.479286 | 3_1:-63624481 | Msa0367740:CDS |
| ATCAACACGCTCATCAGATC+TGG | 0.480897 | 3_1:+63622592 | None:intergenic |
| AAAGCAGGCTGAATCTGAAC+TGG | 0.481733 | 3_1:-63621959 | Msa0367740:CDS |
| GTCTGAGGACGACGAGGAGG+AGG | 0.483048 | 3_1:-63621742 | Msa0367740:CDS |
| AGCAATGCAGATAGGGAGAA+AGG | 0.483063 | 3_1:-63621654 | Msa0367740:CDS |
| CCCAGCAGACTTTGTCAAGC+AGG | 0.483760 | 3_1:+63623615 | None:intergenic |
| GGGAAAGACATGGGAAGAAC+TGG | 0.487052 | 3_1:-63621688 | Msa0367740:CDS |
| AATCTACTGCCCTGTTCTTG+TGG | 0.488157 | 3_1:-63624515 | Msa0367740:CDS |
| AATCTAAGTGATGTGGCCAA+TGG | 0.492543 | 3_1:-63624174 | Msa0367740:CDS |
| GGAAGATAGGAAGAGGAGGA+AGG | 0.492720 | 3_1:-63621613 | Msa0367740:CDS |
| GGAGACTGAGAAAGTCATAC+TGG | 0.494546 | 3_1:-63623995 | Msa0367740:CDS |
| GAAGACGTTGTATAAACATT+GGG | 0.494826 | 3_1:-63624622 | Msa0367740:CDS |
| GGCCATGATTCTTCCACTGT+TGG | 0.498591 | 3_1:-63624270 | Msa0367740:CDS |
| CCACCTTCAATGAAGCTTTG+AGG | 0.498853 | 3_1:+63621906 | None:intergenic |
| GGAAGTGCACAAGGCGCCAA+TGG | 0.499252 | 3_1:-63624705 | Msa0367740:CDS |
| TTCCTTCCACGTCCACCAAA+AGG | 0.500282 | 3_1:+63622665 | None:intergenic |
| ATCTGAATCATCATCTCTCT+GGG | 0.500690 | 3_1:+63623076 | None:intergenic |
| ACTTCAAGCGGGATGTCCTC+AGG | 0.502764 | 3_1:-63622055 | Msa0367740:CDS |
| TGAAAGCAGGACAGATCTCT+GGG | 0.503162 | 3_1:-63624598 | Msa0367740:CDS |
| GCTTGCTGGTGGCGGTAATG+AGG | 0.504642 | 3_1:-63623173 | Msa0367740:CDS |
| TATCTTATGCAGCCAAAAGA+AGG | 0.506111 | 3_1:-63624436 | Msa0367740:CDS |
| TGCAGAGGATTCAGAGGAAG+AGG | 0.506347 | 3_1:-63621712 | Msa0367740:CDS |
| AAGTCTGCTGGGACAGGCAT+TGG | 0.511350 | 3_1:-63623604 | Msa0367740:CDS |
| ATGACATTCAATGTTTCGCT+TGG | 0.512602 | 3_1:-63623517 | Msa0367740:CDS |
| TTGTATCGAGAGAACTGAAA+GGG | 0.512890 | 3_1:+63622912 | None:intergenic |
| CAATCACGATATTTCAAAAG+AGG | 0.513789 | 3_1:-63623257 | Msa0367740:CDS |
| GTTCTGCCTGATGCTGTCTC+CGG | 0.514568 | 3_1:+63623230 | None:intergenic |
| TTGACAAAGTCTGCTGGGAC+AGG | 0.514882 | 3_1:-63623610 | Msa0367740:CDS |
| GACCCTCAAAGCTTCATTGA+AGG | 0.517589 | 3_1:-63621909 | Msa0367740:CDS |
| AACCAGTTCTGCAGAAGACC+TGG | 0.517980 | 3_1:+63623129 | None:intergenic |
| CCTGCTTGACAAAGTCTGCT+GGG | 0.520875 | 3_1:-63623615 | Msa0367740:CDS |
| GCTGGTGGCGGTAATGAGGC+AGG | 0.521800 | 3_1:-63623169 | Msa0367740:CDS |
| TTCTGAGAGTGCATCACTTG+TGG | 0.523683 | 3_1:-63621766 | Msa0367740:CDS |
| ATAAATACTGAAGATTTATG+AGG | 0.524990 | 3_1:+63622215 | None:intergenic |
| AGCAAGCTGCAGTTTCTCCT+GGG | 0.525109 | 3_1:+63622736 | None:intergenic |
| CTCCAAAGCTTTAACAGATG+TGG | 0.525970 | 3_1:-63623380 | Msa0367740:CDS |
| GGAGGGCGGATCCAAAGGTC+AGG | 0.526975 | 3_1:+63622686 | None:intergenic |
| TCATCATTGCTGACAGCACT+AGG | 0.527453 | 3_1:+63623880 | None:intergenic |
| AGGAAGAGGCGGGAAAGACA+TGG | 0.527610 | 3_1:-63621698 | Msa0367740:CDS |
| TACATCACTTGATGGCATCA+AGG | 0.528132 | 3_1:-63622015 | Msa0367740:CDS |
| TTATTCTTTCAATGAGGATG+AGG | 0.529141 | 3_1:-63623356 | Msa0367740:CDS |
| TGGCGTCTAAGACAACTCTA+AGG | 0.530211 | 3_1:-63623285 | Msa0367740:CDS |
| AATTGCGATTGGTGTCCTGC+TGG | 0.530681 | 3_1:+63622969 | None:intergenic |
| TCTTACATAGCAATTGCGAT+TGG | 0.531118 | 3_1:+63622958 | None:intergenic |
| TGAAGACGTTGTATAAACAT+TGG | 0.532003 | 3_1:-63624623 | Msa0367740:CDS |
| CTTCATTGAAGGTGGTGGCT+GGG | 0.532185 | 3_1:-63621898 | Msa0367740:CDS |
| CAAAGCTTCATTGAAGGTGG+TGG | 0.533442 | 3_1:-63621903 | Msa0367740:CDS |
| AGAGAACTGAAAGGGGTCCC+AGG | 0.533777 | 3_1:+63622920 | None:intergenic |
| AAGAACAAAGAGAAAGAGAG+AGG | 0.536590 | 3_1:-63622367 | Msa0367740:CDS |
| AGCTACTGATTCAGAATCTG+AGG | 0.537181 | 3_1:-63621859 | Msa0367740:CDS |
| ACCATAATCTATCTTAACTT+GGG | 0.537405 | 3_1:+63621537 | None:intergenic |
| ATCATCATCTCTCTGGGAGG+AGG | 0.537696 | 3_1:+63623082 | None:intergenic |
| TCGAACTGTTTCAAGCCAGC+AGG | 0.538312 | 3_1:-63622984 | Msa0367740:CDS |
| AAGAACCAATAACCGCCTCA+TGG | 0.543445 | 3_1:+63623716 | None:intergenic |
| TTGAGCAGTAGCTCTTGTAC+CGG | 0.544780 | 3_1:+63623809 | None:intergenic |
| TGGACGTGGAAGGAAGATAC+CGG | 0.545756 | 3_1:-63622657 | Msa0367740:CDS |
| CAAAAGGAGGGCGGATCCAA+AGG | 0.545951 | 3_1:+63622681 | None:intergenic |
| CGAATGAAAGCCACATGGAA+AGG | 0.548195 | 3_1:+63623004 | None:intergenic |
| ATGGACATGGTCCAGAATGT+TGG | 0.549560 | 3_1:-63622431 | Msa0367740:CDS |
| ACATCAAATATTATGAAAGC+AGG | 0.549784 | 3_1:-63621974 | Msa0367740:CDS |
| ATAAACATTGGGATGAAAGC+AGG | 0.551702 | 3_1:-63624611 | Msa0367740:CDS |
| AAAATTTAATCTAAGTGATG+TGG | 0.552032 | 3_1:-63624181 | Msa0367740:CDS |
| ACACCAACTGACTCTCTGGC+AGG | 0.552730 | 3_1:+63624387 | None:intergenic |
| GATTCAGGTTCAACATCTGA+AGG | 0.552962 | 3_1:+63621807 | None:intergenic |
| GTGAGGAAGATAGGAAGAGG+AGG | 0.553851 | 3_1:-63621617 | Msa0367740:CDS |
| ACTGCTAGGCGGCTTGCTGG+TGG | 0.554256 | 3_1:-63623184 | Msa0367740:CDS |
| AATGATCTGATAGTTAAAGA+AGG | 0.554683 | 3_1:-63623541 | Msa0367740:CDS |
| TGAAAAGGAGGCCCCTGACA+TGG | 0.554904 | 3_1:-63623641 | Msa0367740:CDS |
| AGAACCAATAACCGCCTCAT+GGG | 0.556014 | 3_1:+63623717 | None:intergenic |
| GTCCAACAGTGGAAGAATCA+TGG | 0.556378 | 3_1:+63624268 | None:intergenic |
| AGTGTGATTATATGTGCTGT+TGG | 0.557082 | 3_1:-63623835 | Msa0367740:CDS |
| GAAGATTTATGAGGTACCCC+GGG | 0.559058 | 3_1:+63622224 | None:intergenic |
| GCTACTGCTCAAATATAGCT+AGG | 0.560194 | 3_1:-63623798 | Msa0367740:CDS |
| ACATGAGCCTCAAGAGTGCC+CGG | 0.563146 | 3_1:+63622638 | None:intergenic |
| TGGTCCAGAATGTTGGAGGC+GGG | 0.564438 | 3_1:-63622424 | Msa0367740:CDS |
| GGAAGCTTCGTTCCGCTCCA+AGG | 0.565649 | 3_1:-63622858 | Msa0367740:CDS |
| GCAATGCAGATAGGGAGAAA+GGG | 0.565681 | 3_1:-63621653 | Msa0367740:CDS |
| ATGGTCCAGAATGTTGGAGG+CGG | 0.567491 | 3_1:-63622425 | Msa0367740:CDS |
| TGCCAGAGAGTCAGTTGGTG+TGG | 0.567786 | 3_1:-63624385 | Msa0367740:CDS |
| TCAACAAGGCAAGCTGAAGT+AGG | 0.568242 | 3_1:+63622188 | None:intergenic |
| TGCAGAACCTATTCAAAGCA+AGG | 0.568532 | 3_1:-63623761 | Msa0367740:CDS |
| CATCTTTAAGGACTTCAAGC+GGG | 0.568704 | 3_1:-63622066 | Msa0367740:CDS |
| ATCTGGAGAGAGTTGGACTT+GGG | 0.569122 | 3_1:-63622112 | Msa0367740:CDS |
| TTTACATTCTACACTGATGG+AGG | 0.570096 | 3_1:-63624016 | Msa0367740:CDS |
| GAAGATACCGGGCACTCTTG+AGG | 0.573504 | 3_1:-63622645 | Msa0367740:CDS |
| TGCATCACTTGTGGAGTCTG+AGG | 0.574872 | 3_1:-63621757 | Msa0367740:CDS |
| ACAGTGAGGAAGATAGGAAG+AGG | 0.574947 | 3_1:-63621620 | Msa0367740:CDS |
| AGTTTCTGTTGTTGAAAAGG+AGG | 0.575255 | 3_1:-63623653 | Msa0367740:CDS |
| GACATGGTCCAGAATGTTGG+AGG | 0.577607 | 3_1:-63622428 | Msa0367740:CDS |
| GATACAAACATGAAGTTCCA+AGG | 0.577642 | 3_1:-63622896 | Msa0367740:CDS |
| AAAAGTCAACTGTAAACTGA+AGG | 0.577733 | 3_1:-63623965 | Msa0367740:CDS |
| GAGGATTCAGAGGAAGAGGC+GGG | 0.578156 | 3_1:-63621708 | Msa0367740:CDS |
| AGACTCTGCAGAGGATTCAG+AGG | 0.578273 | 3_1:-63621718 | Msa0367740:CDS |
| GGGAAGCCAAGTTCTCTAAG+AGG | 0.580331 | 3_1:+63622245 | None:intergenic |
| GAGAGCAACTTTGGTTACCC+AGG | 0.581021 | 3_1:-63622753 | Msa0367740:CDS |
| TGAGCAGTAGCTCTTGTACC+GGG | 0.581429 | 3_1:+63623810 | None:intergenic |
| TCTTCATCACATTAGTTGTG+AGG | 0.583182 | 3_1:+63624088 | None:intergenic |
| CTTAGATCTTCTGAAGGTGG+AGG | 0.583379 | 3_1:+63624546 | None:intergenic |
| CTGCACAACCATATTATGGT+AGG | 0.583831 | 3_1:-63622494 | Msa0367740:CDS |
| AATCTGGAGAGAGTTGGACT+TGG | 0.585540 | 3_1:-63622113 | Msa0367740:CDS |
| CATCAAAATGGAAGTGCACA+AGG | 0.586647 | 3_1:-63624714 | Msa0367740:CDS |
| GGAAGAGGCGGGAAAGACAT+GGG | 0.587578 | 3_1:-63621697 | Msa0367740:CDS |
| TCATCTTTAAGGACTTCAAG+CGG | 0.589833 | 3_1:-63622067 | Msa0367740:CDS |
| AGAGGATTCAGAGGAAGAGG+CGG | 0.590139 | 3_1:-63621709 | Msa0367740:CDS |
| TTATGTTGAGGTAATGGACA+TGG | 0.591059 | 3_1:-63622444 | Msa0367740:CDS |
| GATTGATCAAAAGAATGAAG+CGG | 0.595195 | 3_1:-63623056 | Msa0367740:CDS |
| AGGTATCTTAGATCTTCTGA+AGG | 0.596800 | 3_1:+63624540 | None:intergenic |
| TTCTGCAGAAGACCTGGAAG+AGG | 0.598092 | 3_1:+63623135 | None:intergenic |
| AAGTCAAGGCCATTAAATTG+TGG | 0.598223 | 3_1:+63622281 | None:intergenic |
| TGAAGATTTATGAGGTACCC+CGG | 0.598255 | 3_1:+63622223 | None:intergenic |
| TCACAGTGGTACAGAGCACT+TGG | 0.599117 | 3_1:-63623305 | Msa0367740:CDS |
| TGTGGCTTATTCTTTCAATG+AGG | 0.600732 | 3_1:-63623362 | Msa0367740:CDS |
| TCATCTCTCTGGGAGGAGGA+AGG | 0.600914 | 3_1:+63623086 | None:intergenic |
| TCAAGCAGGAAACCATGTCA+GGG | 0.602541 | 3_1:+63623629 | None:intergenic |
| TTATATGTGCTGTTGGAGCC+CGG | 0.604832 | 3_1:-63623828 | Msa0367740:CDS |
| CACTTGATGGCATCAAGGAG+TGG | 0.604894 | 3_1:-63622010 | Msa0367740:CDS |
| TGCCATCAAGTGATGTAGAA+GGG | 0.604900 | 3_1:+63622021 | None:intergenic |
| CGTACTCAGTCAAAGTCTGA+TGG | 0.605540 | 3_1:-63624291 | Msa0367740:CDS |
| CTTCCACGTCCACCAAAAGG+AGG | 0.606372 | 3_1:+63622668 | None:intergenic |
| GACATGGGAAGAACTGGAGA+GGG | 0.606608 | 3_1:-63621682 | Msa0367740:CDS |
| TGTATTCAGATCAATAGCAT+AGG | 0.607701 | 3_1:+63624659 | None:intergenic |
| TATCTTAGATCTTCTGAAGG+TGG | 0.609706 | 3_1:+63624543 | None:intergenic |
| ACCTGAATCAGACTCTGAAG+AGG | 0.611399 | 3_1:-63621793 | Msa0367740:CDS |
| GGAAGGCTAAAACGAACCAA+AGG | 0.611552 | 3_1:-63621596 | Msa0367740:CDS |
| AAACAATGCAGAAAACCCAT+TGG | 0.611642 | 3_1:+63624158 | None:intergenic |
| AGAGGAAAAGCCTAAATCAA+AGG | 0.612477 | 3_1:-63623332 | Msa0367740:CDS |
| ATATTTCAAAAGAGGAACTC+CGG | 0.612864 | 3_1:-63623249 | Msa0367740:CDS |
| CTTAGAGTGACAACAAGGAA+AGG | 0.613481 | 3_1:+63622152 | None:intergenic |
| TGAATCAGACTCTGAAGAGG+AGG | 0.614954 | 3_1:-63621790 | Msa0367740:CDS |
| CAAGTCTGATGTGGTGACTT+CGG | 0.615721 | 3_1:-63623407 | Msa0367740:CDS |
| TCCAAGCATCCACAAGAACA+GGG | 0.615743 | 3_1:+63624506 | None:intergenic |
| CCTCAAAGCTTCATTGAAGG+TGG | 0.617669 | 3_1:-63621906 | Msa0367740:CDS |
| AGACTTTGACTGAGTACGAA+TGG | 0.619128 | 3_1:+63624296 | None:intergenic |
| GTTGATCAAACTCCAAGTCA+AGG | 0.619153 | 3_1:+63622267 | None:intergenic |
| ATTGTGAATCTGGAGAGAGT+TGG | 0.619770 | 3_1:-63622119 | Msa0367740:CDS |
| ATGGAAAAGCTAGTGCAGCT+GGG | 0.621264 | 3_1:-63624686 | Msa0367740:CDS |
| AACAATAATGGTCTTCACGA+AGG | 0.621713 | 3_1:-63624469 | Msa0367740:CDS |
| TGCAATCCATCAAAACACTC+AGG | 0.622239 | 3_1:-63622811 | Msa0367740:CDS |
| TTGACTGAGTACGAATGGCA+CGG | 0.623097 | 3_1:+63624301 | None:intergenic |
| CAACAAAGACAAGTCTGATG+TGG | 0.623256 | 3_1:-63623416 | Msa0367740:CDS |
| AGGGAACGAGTCGGACAGTG+AGG | 0.623387 | 3_1:-63621634 | Msa0367740:CDS |
| AAAAGCTAGTGCAGCTGGGT+CGG | 0.623884 | 3_1:-63624682 | Msa0367740:CDS |
| TTCAGAATCTGAGGGCTCAG+AGG | 0.624658 | 3_1:-63621850 | Msa0367740:CDS |
| TGTTGGACACATAGCTAGAG+AGG | 0.625583 | 3_1:-63624253 | Msa0367740:CDS |
| TTCCACGTCCACCAAAAGGA+GGG | 0.626429 | 3_1:+63622669 | None:intergenic |
| CAGGCGACAAGTTGTAGCGA+GGG | 0.629946 | 3_1:-63622792 | Msa0367740:CDS |
| TCTAGCTATGTGTCCAACAG+TGG | 0.637321 | 3_1:+63624257 | None:intergenic |
| CAGAAGACCTGGAAGAGGAA+CGG | 0.638461 | 3_1:+63623140 | None:intergenic |
| AACACGCTCATCAGATCTGG+TGG | 0.641662 | 3_1:+63622595 | None:intergenic |
| TAAGCAGTAGCATGCCGAAG+CGG | 0.644981 | 3_1:-63621560 | Msa0367740:CDS |
| GGAGGAGGAAGACTCTGCAG+AGG | 0.646849 | 3_1:-63621727 | Msa0367740:CDS |
| TAGTGCTGTCAGCAATGATG+AGG | 0.647144 | 3_1:-63623878 | Msa0367740:CDS |
| TAGGGAGAAAGGGAACGAGT+CGG | 0.649683 | 3_1:-63621643 | Msa0367740:CDS |
| AAGTATGGTTCCTTTCCATG+TGG | 0.652478 | 3_1:-63623014 | Msa0367740:CDS |
| GCTACTGATTCAGAATCTGA+GGG | 0.654893 | 3_1:-63621858 | Msa0367740:CDS |
| AAACCTGCCAGAGAGTCAGT+TGG | 0.655802 | 3_1:-63624390 | Msa0367740:CDS |
| GGTTGTGCAGATGAAAGTGC+AGG | 0.656548 | 3_1:+63622507 | None:intergenic |
| AGACATGGGAAGAACTGGAG+AGG | 0.656591 | 3_1:-63621683 | Msa0367740:CDS |
| CAGTTCGAATGAAAGCCACA+TGG | 0.657920 | 3_1:+63622999 | None:intergenic |
| AATCGGGTAAATGATCTTTG+GGG | 0.658631 | 3_1:-63622308 | Msa0367740:CDS |
| GAACAGTAAGTCTAAGAACA+AGG | 0.659531 | 3_1:-63623473 | Msa0367740:CDS |
| TTTGTATCGAGAGAACTGAA+AGG | 0.661507 | 3_1:+63622911 | None:intergenic |
| GGATTCAAGGCACATAAGTG+AGG | 0.661843 | 3_1:-63622837 | Msa0367740:CDS |
| TCAGGCGACAAGTTGTAGCG+AGG | 0.662477 | 3_1:-63622793 | Msa0367740:CDS |
| AACAGCACATATAATCACAC+TGG | 0.665786 | 3_1:+63623837 | None:intergenic |
| TCTTCTGAAAGCCCATGAGG+CGG | 0.666109 | 3_1:-63623728 | Msa0367740:CDS |
| TCTCACTTAGAGTGACAACA+AGG | 0.668335 | 3_1:+63622147 | None:intergenic |
| CACGTCCACCAAAAGGAGGG+CGG | 0.668683 | 3_1:+63622672 | None:intergenic |
| GGACGTGGAAGGAAGATACC+GGG | 0.672363 | 3_1:-63622656 | Msa0367740:CDS |
| GTGCAGATGAAAGTGCAGGA+GGG | 0.672573 | 3_1:+63622511 | None:intergenic |
| TGTGCCTTGAATCCTTGGAG+CGG | 0.674560 | 3_1:+63622846 | None:intergenic |
| GGAGTCTGAGGACGACGAGG+AGG | 0.681166 | 3_1:-63621745 | Msa0367740:CDS |
| CTACTGCTTAGATGGCCTCG+TGG | 0.686092 | 3_1:+63621573 | None:intergenic |
| CAAGCAGGAAACCATGTCAG+GGG | 0.692606 | 3_1:+63623630 | None:intergenic |
| GGTTCTTCTGAAAGCCCATG+AGG | 0.693546 | 3_1:-63623731 | Msa0367740:CDS |
| ATAGCTAGAGAGGAACCTGA+AGG | 0.698763 | 3_1:-63624243 | Msa0367740:CDS |
| TAGAGAACTTGGCTTCCCCG+GGG | 0.698919 | 3_1:-63622240 | Msa0367740:CDS |
| AAAACGAACCAAAGGCCACG+AGG | 0.699347 | 3_1:-63621588 | Msa0367740:CDS |
| TGTGGAGTCTGAGGACGACG+AGG | 0.700555 | 3_1:-63621748 | Msa0367740:CDS |
| TGTGCAGATGAAAGTGCAGG+AGG | 0.701443 | 3_1:+63622510 | None:intergenic |
| TGTATCGAGAGAACTGAAAG+GGG | 0.703721 | 3_1:+63622913 | None:intergenic |
| AAGGGATAGAATCAATCCTG+AGG | 0.704632 | 3_1:+63622039 | None:intergenic |
| GAGTCTCTATCAGTTCAACA+AGG | 0.714546 | 3_1:+63622174 | None:intergenic |
| TGAATCATCATCTCTCTGGG+AGG | 0.727247 | 3_1:+63623079 | None:intergenic |
| AAAATGAAGAAACTGCTAGG+CGG | 0.732229 | 3_1:-63623195 | Msa0367740:CDS |
| AAATCAAAGGCTGATCACAG+TGG | 0.756929 | 3_1:-63623319 | Msa0367740:CDS |
| GAAAGCAGGACAGATCTCTG+GGG | 0.762904 | 3_1:-63624597 | Msa0367740:CDS |
| AAGATTTATGAGGTACCCCG+GGG | 0.785379 | 3_1:+63622225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTAATCTAAGTGATG+TGG | - | chr3_1:63622087-63622106 | Msa0367740:CDS | 20.0% |
| !!! | AGAATTATTTTTAATGTTCC+TGG | - | chr3_1:63623330-63623349 | Msa0367740:CDS | 20.0% |
| !!! | GAATTATTTTTAATGTTCCT+GGG | - | chr3_1:63623331-63623350 | Msa0367740:CDS | 20.0% |
| !!! | TTTTATTTCCTACCATAATA+TGG | + | chr3_1:63623785-63623804 | None:intergenic | 20.0% |
| !! | ATAAATACTGAAGATTTATG+AGG | + | chr3_1:63624056-63624075 | None:intergenic | 20.0% |
| ! | AAGGAAAATTGCTTGATTTA+TGG | - | chr3_1:63622044-63622063 | Msa0367740:CDS | 25.0% |
| ! | AGGAAAATTGCTTGATTTAT+GGG | - | chr3_1:63622045-63622064 | Msa0367740:CDS | 25.0% |
| !! | AATTTTACATTCTACACTGA+TGG | - | chr3_1:63622249-63622268 | Msa0367740:CDS | 25.0% |
| ! | AATGATCTGATAGTTAAAGA+AGG | - | chr3_1:63622727-63622746 | Msa0367740:CDS | 25.0% |
| ! | GAAGAATGCATGTTTAATAT+TGG | + | chr3_1:63623712-63623731 | None:intergenic | 25.0% |
| !! | AATTTCAAAGCTTTGTGAAT+CGG | - | chr3_1:63623943-63623962 | Msa0367740:CDS | 25.0% |
| ! | ACATCAAATATTATGAAAGC+AGG | - | chr3_1:63624294-63624313 | Msa0367740:CDS | 25.0% |
| TGTATTCAGATCAATAGCAT+AGG | + | chr3_1:63621612-63621631 | None:intergenic | 30.0% | |
| TGAAGACGTTGTATAAACAT+TGG | - | chr3_1:63621645-63621664 | Msa0367740:CDS | 30.0% | |
| GAAGACGTTGTATAAACATT+GGG | - | chr3_1:63621646-63621665 | Msa0367740:CDS | 30.0% | |
| ! | TGAAGACCATTATTGTTTCT+GGG | + | chr3_1:63621796-63621815 | None:intergenic | 30.0% |
| ! | AAATCAAGCAATTTTCCTTC+AGG | + | chr3_1:63622043-63622062 | None:intergenic | 30.0% |
| !! | AGTTTACAGTTGACTTTTGA+AGG | + | chr3_1:63622301-63622320 | None:intergenic | 30.0% |
| AAAAGTCAACTGTAAACTGA+AGG | - | chr3_1:63622303-63622322 | Msa0367740:CDS | 30.0% | |
| TTATTCTTTCAATGAGGATG+AGG | - | chr3_1:63622912-63622931 | Msa0367740:CDS | 30.0% | |
| CAATCACGATATTTCAAAAG+AGG | - | chr3_1:63623011-63623030 | Msa0367740:CDS | 30.0% | |
| ATATTTCAAAAGAGGAACTC+CGG | - | chr3_1:63623019-63623038 | Msa0367740:CDS | 30.0% | |
| AGAAAAATGAAGAAACTGCT+AGG | - | chr3_1:63623070-63623089 | Msa0367740:CDS | 30.0% | |
| GATTGATCAAAAGAATGAAG+CGG | - | chr3_1:63623212-63623231 | Msa0367740:CDS | 30.0% | |
| CCTTCAAATAAATAGATCCT+TGG | + | chr3_1:63623392-63623411 | None:intergenic | 30.0% | |
| CCAAGGATCTATTTATTTGA+AGG | - | chr3_1:63623389-63623408 | Msa0367740:CDS | 30.0% | |
| ! | GTAATCATTTCATTTTCTGC+TGG | + | chr3_1:63623738-63623757 | None:intergenic | 30.0% |
| AACATAAAACTGAACATCCT+TGG | + | chr3_1:63623811-63623830 | None:intergenic | 30.0% | |
| !! | TCAGTTTTATGTTGAGGTAA+TGG | - | chr3_1:63623818-63623837 | Msa0367740:CDS | 30.0% |
| ! | ATTTCAAAGCTTTGTGAATC+GGG | - | chr3_1:63623944-63623963 | Msa0367740:CDS | 30.0% |
| TGACATGACAATCATCTTTA+AGG | - | chr3_1:63624190-63624209 | Msa0367740:CDS | 30.0% | |
| ATAAACATTGGGATGAAAGC+AGG | - | chr3_1:63621657-63621676 | Msa0367740:CDS | 35.0% | |
| ! | TATCTTAGATCTTCTGAAGG+TGG | + | chr3_1:63621728-63621747 | None:intergenic | 35.0% |
| AGGTATCTTAGATCTTCTGA+AGG | + | chr3_1:63621731-63621750 | None:intergenic | 35.0% | |
| TGAGTTCCCAGAAACAATAA+TGG | - | chr3_1:63621787-63621806 | Msa0367740:CDS | 35.0% | |
| GTGAAGACCATTATTGTTTC+TGG | + | chr3_1:63621797-63621816 | None:intergenic | 35.0% | |
| AACAATAATGGTCTTCACGA+AGG | - | chr3_1:63621799-63621818 | Msa0367740:CDS | 35.0% | |
| TATCTTATGCAGCCAAAAGA+AGG | - | chr3_1:63621832-63621851 | Msa0367740:CDS | 35.0% | |
| ! | CAAGAATAGATGCCTTCTTT+TGG | + | chr3_1:63621847-63621866 | None:intergenic | 35.0% |
| GTCAAGCCTAAAAATGATGA+TGG | - | chr3_1:63621920-63621939 | Msa0367740:CDS | 35.0% | |
| !! | GAAGCTCCATCATCATTTTT+AGG | + | chr3_1:63621929-63621948 | None:intergenic | 35.0% |
| AAACAATGCAGAAAACCCAT+TGG | + | chr3_1:63622113-63622132 | None:intergenic | 35.0% | |
| TCTTCATCACATTAGTTGTG+AGG | + | chr3_1:63622183-63622202 | None:intergenic | 35.0% | |
| TTTACATTCTACACTGATGG+AGG | - | chr3_1:63622252-63622271 | Msa0367740:CDS | 35.0% | |
| AACAGCACATATAATCACAC+TGG | + | chr3_1:63622434-63622453 | None:intergenic | 35.0% | |
| AGTGTGATTATATGTGCTGT+TGG | - | chr3_1:63622433-63622452 | Msa0367740:CDS | 35.0% | |
| ! | TCATAAGCCTTGCTTTGAAT+AGG | + | chr3_1:63622517-63622536 | None:intergenic | 35.0% |
| TATTCAAAGCAAGGCTTATG+AGG | - | chr3_1:63622516-63622535 | Msa0367740:CDS | 35.0% | |
| !! | GTTATTGGTTCTTTAAAGCC+TGG | - | chr3_1:63622562-63622581 | Msa0367740:CDS | 35.0% |
| TGCAGTTTCTGTTGTTGAAA+AGG | - | chr3_1:63622612-63622631 | Msa0367740:CDS | 35.0% | |
| AGTTTCTGTTGTTGAAAAGG+AGG | - | chr3_1:63622615-63622634 | Msa0367740:CDS | 35.0% | |
| ATGACATTCAATGTTTCGCT+TGG | - | chr3_1:63622751-63622770 | Msa0367740:CDS | 35.0% | |
| GAACAGTAAGTCTAAGAACA+AGG | - | chr3_1:63622795-63622814 | Msa0367740:CDS | 35.0% | |
| TGTGGCTTATTCTTTCAATG+AGG | - | chr3_1:63622906-63622925 | Msa0367740:CDS | 35.0% | |
| AGAGGAAAAGCCTAAATCAA+AGG | - | chr3_1:63622936-63622955 | Msa0367740:CDS | 35.0% | |
| AAAATGAAGAAACTGCTAGG+CGG | - | chr3_1:63623073-63623092 | Msa0367740:CDS | 35.0% | |
| AAGGTCGTTTATGTTCTTGT+AGG | + | chr3_1:63623166-63623185 | None:intergenic | 35.0% | |
| ATCTGAATCATCATCTCTCT+GGG | + | chr3_1:63623195-63623214 | None:intergenic | 35.0% | |
| AATCTGAATCATCATCTCTC+TGG | + | chr3_1:63623196-63623215 | None:intergenic | 35.0% | |
| CTTACCAATTAACGGAAGTA+TGG | - | chr3_1:63623239-63623258 | Msa0367740:CDS | 35.0% | |
| TCTTACATAGCAATTGCGAT+TGG | + | chr3_1:63623313-63623332 | None:intergenic | 35.0% | |
| TTGTATCGAGAGAACTGAAA+GGG | + | chr3_1:63623359-63623378 | None:intergenic | 35.0% | |
| TTTGTATCGAGAGAACTGAA+AGG | + | chr3_1:63623360-63623379 | None:intergenic | 35.0% | |
| GATACAAACATGAAGTTCCA+AGG | - | chr3_1:63623372-63623391 | Msa0367740:CDS | 35.0% | |
| TCATCTGCACAACCATATTA+TGG | - | chr3_1:63623770-63623789 | Msa0367740:CDS | 35.0% | |
| GGTAGGAAATAAAAAGACCA+AGG | - | chr3_1:63623791-63623810 | Msa0367740:CDS | 35.0% | |
| !! | GGATGTTCAGTTTTATGTTG+AGG | - | chr3_1:63623812-63623831 | Msa0367740:CDS | 35.0% |
| !! | TTATGTTGAGGTAATGGACA+TGG | - | chr3_1:63623824-63623843 | Msa0367740:CDS | 35.0% |
| AAGAACAAAGAGAAAGAGAG+AGG | - | chr3_1:63623901-63623920 | Msa0367740:CDS | 35.0% | |
| TGAATCGGGTAAATGATCTT+TGG | - | chr3_1:63623958-63623977 | Msa0367740:CDS | 35.0% | |
| GAATCGGGTAAATGATCTTT+GGG | - | chr3_1:63623959-63623978 | Msa0367740:CDS | 35.0% | |
| AATCGGGTAAATGATCTTTG+GGG | - | chr3_1:63623960-63623979 | Msa0367740:CDS | 35.0% | |
| AAGTCAAGGCCATTAAATTG+TGG | + | chr3_1:63623990-63624009 | None:intergenic | 35.0% | |
| ! | ACAATTTAATGGCCTTGACT+TGG | - | chr3_1:63623989-63624008 | Msa0367740:CDS | 35.0% |
| TGAGATTGAGATTGTGAATC+TGG | - | chr3_1:63624139-63624158 | Msa0367740:CDS | 35.0% | |
| ! | TCATCTTTAAGGACTTCAAG+CGG | - | chr3_1:63624201-63624220 | Msa0367740:CDS | 35.0% |
| ! | CTTGTGCACTTCCATTTTGA+TGG | + | chr3_1:63621556-63621575 | None:intergenic | 40.0% |
| ! | CATCAAAATGGAAGTGCACA+AGG | - | chr3_1:63621554-63621573 | Msa0367740:CDS | 40.0% |
| !! | TGATGATGGAGCTTCTCTTA+TGG | - | chr3_1:63621934-63621953 | Msa0367740:CDS | 40.0% |
| AGACTTTGACTGAGTACGAA+TGG | + | chr3_1:63621975-63621994 | None:intergenic | 40.0% | |
| AATCTAAGTGATGTGGCCAA+TGG | - | chr3_1:63622094-63622113 | Msa0367740:CDS | 40.0% | |
| ATCTAAGTGATGTGGCCAAT+GGG | - | chr3_1:63622095-63622114 | Msa0367740:CDS | 40.0% | |
| !! | TACCCTCCAATTTTTCAGAG+TGG | - | chr3_1:63622346-63622365 | Msa0367740:CDS | 40.0% |
| ! | CTCCACTCTGAAAAATTGGA+GGG | + | chr3_1:63622351-63622370 | None:intergenic | 40.0% |
| !! | CTCCAATTTTTCAGAGTGGA+GGG | - | chr3_1:63622350-63622369 | Msa0367740:CDS | 40.0% |
| ! | TTCCCTCCACTCTGAAAAAT+TGG | + | chr3_1:63622355-63622374 | None:intergenic | 40.0% |
| GCTACTGCTCAAATATAGCT+AGG | - | chr3_1:63622470-63622489 | Msa0367740:CDS | 40.0% | |
| TGCAGAACCTATTCAAAGCA+AGG | - | chr3_1:63622507-63622526 | Msa0367740:CDS | 40.0% | |
| CAACAAAGACAAGTCTGATG+TGG | - | chr3_1:63622852-63622871 | Msa0367740:CDS | 40.0% | |
| ! | CTCCAAAGCTTTAACAGATG+TGG | - | chr3_1:63622888-63622907 | Msa0367740:CDS | 40.0% |
| AGCCACATCTGTTAAAGCTT+TGG | + | chr3_1:63622893-63622912 | None:intergenic | 40.0% | |
| TTTCAATGAGGATGAGGAAG+AGG | - | chr3_1:63622918-63622937 | Msa0367740:CDS | 40.0% | |
| ! | CTGTGATCAGCCTTTGATTT+AGG | + | chr3_1:63622949-63622968 | None:intergenic | 40.0% |
| AAATCAAAGGCTGATCACAG+TGG | - | chr3_1:63622949-63622968 | Msa0367740:CDS | 40.0% | |
| GCGGTTCTCTTACCAATTAA+CGG | - | chr3_1:63623231-63623250 | Msa0367740:CDS | 40.0% | |
| GGAACCATACTTCCGTTAAT+TGG | + | chr3_1:63623246-63623265 | None:intergenic | 40.0% | |
| AAGTATGGTTCCTTTCCATG+TGG | - | chr3_1:63623254-63623273 | Msa0367740:CDS | 40.0% | |
| TGTATCGAGAGAACTGAAAG+GGG | + | chr3_1:63623358-63623377 | None:intergenic | 40.0% | |
| ACTTATGTGCCTTGAATCCT+TGG | + | chr3_1:63623430-63623449 | None:intergenic | 40.0% | |
| TGCAATCCATCAAAACACTC+AGG | - | chr3_1:63623457-63623476 | Msa0367740:CDS | 40.0% | |
| CAAAGGTCAGGCAATCTTAT+CGG | + | chr3_1:63623573-63623592 | None:intergenic | 40.0% | |
| ! | TCATTTCATTTTCTGCTGGC+TGG | + | chr3_1:63623734-63623753 | None:intergenic | 40.0% |
| CTGCACAACCATATTATGGT+AGG | - | chr3_1:63623774-63623793 | Msa0367740:CDS | 40.0% | |
| TGTTCTTCTTCAAGCTCATC+AGG | + | chr3_1:63623888-63623907 | None:intergenic | 40.0% | |
| TGGGGACAACCACAATTTAA+TGG | - | chr3_1:63623978-63623997 | Msa0367740:CDS | 40.0% | |
| GTTGATCAAACTCCAAGTCA+AGG | + | chr3_1:63624004-63624023 | None:intergenic | 40.0% | |
| GATCAACCTCTTAGAGAACT+TGG | - | chr3_1:63624017-63624036 | Msa0367740:CDS | 40.0% | |
| ! | TGAAGATTTATGAGGTACCC+CGG | + | chr3_1:63624048-63624067 | None:intergenic | 40.0% |
| GAGTCTCTATCAGTTCAACA+AGG | + | chr3_1:63624097-63624116 | None:intergenic | 40.0% | |
| CTTAGAGTGACAACAAGGAA+AGG | + | chr3_1:63624119-63624138 | None:intergenic | 40.0% | |
| TCTCACTTAGAGTGACAACA+AGG | + | chr3_1:63624124-63624143 | None:intergenic | 40.0% | |
| ATTGTGAATCTGGAGAGAGT+TGG | - | chr3_1:63624149-63624168 | Msa0367740:CDS | 40.0% | |
| ! | CATCTTTAAGGACTTCAAGC+GGG | - | chr3_1:63624202-63624221 | Msa0367740:CDS | 40.0% |
| AAGGGATAGAATCAATCCTG+AGG | + | chr3_1:63624232-63624251 | None:intergenic | 40.0% | |
| ATCCCTTCTACATCACTTGA+TGG | - | chr3_1:63624245-63624264 | Msa0367740:CDS | 40.0% | |
| TGCCATCAAGTGATGTAGAA+GGG | + | chr3_1:63624250-63624269 | None:intergenic | 40.0% | |
| ATGCCATCAAGTGATGTAGA+AGG | + | chr3_1:63624251-63624270 | None:intergenic | 40.0% | |
| ! | TACATCACTTGATGGCATCA+AGG | - | chr3_1:63624253-63624272 | Msa0367740:CDS | 40.0% |
| ! | CACCTTCAATGAAGCTTTGA+GGG | + | chr3_1:63624364-63624383 | None:intergenic | 40.0% |
| !! | AGCTACTGATTCAGAATCTG+AGG | - | chr3_1:63624409-63624428 | Msa0367740:CDS | 40.0% |
| !! | GCTACTGATTCAGAATCTGA+GGG | - | chr3_1:63624410-63624429 | Msa0367740:CDS | 40.0% |
| ! | GATTCAGGTTCAACATCTGA+AGG | + | chr3_1:63624464-63624483 | None:intergenic | 40.0% |
| !!! | AGCTGCACTAGCTTTTCCAT+TGG | + | chr3_1:63621582-63621601 | None:intergenic | 45.0% |
| AATGGAAAAGCTAGTGCAGC+TGG | - | chr3_1:63621581-63621600 | Msa0367740:CDS | 45.0% | |
| ATGGAAAAGCTAGTGCAGCT+GGG | - | chr3_1:63621582-63621601 | Msa0367740:CDS | 45.0% | |
| ATGAAAGCAGGACAGATCTC+TGG | - | chr3_1:63621669-63621688 | Msa0367740:CDS | 45.0% | |
| TGAAAGCAGGACAGATCTCT+GGG | - | chr3_1:63621670-63621689 | Msa0367740:CDS | 45.0% | |
| ! | CTTAGATCTTCTGAAGGTGG+AGG | + | chr3_1:63621725-63621744 | None:intergenic | 45.0% |
| AGAACAGGGCAGTAGATTTC+AGG | + | chr3_1:63621751-63621770 | None:intergenic | 45.0% | |
| AATCTACTGCCCTGTTCTTG+TGG | - | chr3_1:63621753-63621772 | Msa0367740:CDS | 45.0% | |
| TCCAAGCATCCACAAGAACA+GGG | + | chr3_1:63621765-63621784 | None:intergenic | 45.0% | |
| ATCCAAGCATCCACAAGAAC+AGG | + | chr3_1:63621766-63621785 | None:intergenic | 45.0% | |
| TTGACTGAGTACGAATGGCA+CGG | + | chr3_1:63621970-63621989 | None:intergenic | 45.0% | |
| CGTACTCAGTCAAAGTCTGA+TGG | - | chr3_1:63621977-63621996 | Msa0367740:CDS | 45.0% | |
| GTCCAACAGTGGAAGAATCA+TGG | + | chr3_1:63622003-63622022 | None:intergenic | 45.0% | |
| TCTAGCTATGTGTCCAACAG+TGG | + | chr3_1:63622014-63622033 | None:intergenic | 45.0% | |
| TGTTGGACACATAGCTAGAG+AGG | - | chr3_1:63622015-63622034 | Msa0367740:CDS | 45.0% | |
| ATAGCTAGAGAGGAACCTGA+AGG | - | chr3_1:63622025-63622044 | Msa0367740:CDS | 45.0% | |
| GAGGTATGCAGCTCTCTTAA+TGG | + | chr3_1:63622164-63622183 | None:intergenic | 45.0% | |
| GGAGACTGAGAAAGTCATAC+TGG | - | chr3_1:63622273-63622292 | Msa0367740:CDS | 45.0% | |
| ! | CCTCCACTCTGAAAAATTGG+AGG | + | chr3_1:63622352-63622371 | None:intergenic | 45.0% |
| !! | CCTCCAATTTTTCAGAGTGG+AGG | - | chr3_1:63622349-63622368 | Msa0367740:CDS | 45.0% |
| GTGGAGGGAAGTTTGATCTT+AGG | - | chr3_1:63622365-63622384 | Msa0367740:CDS | 45.0% | |
| TCATCATTGCTGACAGCACT+AGG | + | chr3_1:63622391-63622410 | None:intergenic | 45.0% | |
| TAGTGCTGTCAGCAATGATG+AGG | - | chr3_1:63622390-63622409 | Msa0367740:CDS | 45.0% | |
| ! | TTATATGTGCTGTTGGAGCC+CGG | - | chr3_1:63622440-63622459 | Msa0367740:CDS | 45.0% |
| TTGAGCAGTAGCTCTTGTAC+CGG | + | chr3_1:63622462-63622481 | None:intergenic | 45.0% | |
| AGAACCAATAACCGCCTCAT+GGG | + | chr3_1:63622554-63622573 | None:intergenic | 45.0% | |
| AAGAACCAATAACCGCCTCA+TGG | + | chr3_1:63622555-63622574 | None:intergenic | 45.0% | |
| ! | GCAGCACTCAATTTGTTTCC+AGG | + | chr3_1:63622583-63622602 | None:intergenic | 45.0% |
| TCAAGCAGGAAACCATGTCA+GGG | + | chr3_1:63622642-63622661 | None:intergenic | 45.0% | |
| ! | GGTATTGAGTTTCGAGAGTC+TGG | - | chr3_1:63622685-63622704 | Msa0367740:CDS | 45.0% |
| CAAGTCTGATGTGGTGACTT+CGG | - | chr3_1:63622861-63622880 | Msa0367740:CDS | 45.0% | |
| ! | TGGCGTCTAAGACAACTCTA+AGG | - | chr3_1:63622983-63623002 | Msa0367740:CDS | 45.0% |
| TGAATCATCATCTCTCTGGG+AGG | + | chr3_1:63623192-63623211 | None:intergenic | 45.0% | |
| CGAATGAAAGCCACATGGAA+AGG | + | chr3_1:63623267-63623286 | None:intergenic | 45.0% | |
| CAGTTCGAATGAAAGCCACA+TGG | + | chr3_1:63623272-63623291 | None:intergenic | 45.0% | |
| GGATTCAAGGCACATAAGTG+AGG | - | chr3_1:63623431-63623450 | Msa0367740:CDS | 45.0% | |
| !! | TTGTCGCCTGAGTGTTTTGA+TGG | + | chr3_1:63623466-63623485 | None:intergenic | 45.0% |
| CGATAAGATTGCCTGACCTT+TGG | - | chr3_1:63623571-63623590 | Msa0367740:CDS | 45.0% | |
| ACTCTTGAGGCTCATGTGAA+TGG | - | chr3_1:63623636-63623655 | Msa0367740:CDS | 45.0% | |
| CTCTTGAGGCTCATGTGAAT+GGG | - | chr3_1:63623637-63623656 | Msa0367740:CDS | 45.0% | |
| ATCAACACGCTCATCAGATC+TGG | + | chr3_1:63623679-63623698 | None:intergenic | 45.0% | |
| ATGGACATGGTCCAGAATGT+TGG | - | chr3_1:63623837-63623856 | Msa0367740:CDS | 45.0% | |
| ! | AAGATTTATGAGGTACCCCG+GGG | + | chr3_1:63624046-63624065 | None:intergenic | 45.0% |
| ! | GAAGATTTATGAGGTACCCC+GGG | + | chr3_1:63624047-63624066 | None:intergenic | 45.0% |
| TCAACAAGGCAAGCTGAAGT+AGG | + | chr3_1:63624083-63624102 | None:intergenic | 45.0% | |
| AATCTGGAGAGAGTTGGACT+TGG | - | chr3_1:63624155-63624174 | Msa0367740:CDS | 45.0% | |
| ATCTGGAGAGAGTTGGACTT+GGG | - | chr3_1:63624156-63624175 | Msa0367740:CDS | 45.0% | |
| AAAGCAGGCTGAATCTGAAC+TGG | - | chr3_1:63624309-63624328 | Msa0367740:CDS | 45.0% | |
| GGTCATCTGTGATTGTCTTC+AGG | + | chr3_1:63624343-63624362 | None:intergenic | 45.0% | |
| GACCCTCAAAGCTTCATTGA+AGG | - | chr3_1:63624359-63624378 | Msa0367740:CDS | 45.0% | |
| CCACCTTCAATGAAGCTTTG+AGG | + | chr3_1:63624365-63624384 | None:intergenic | 45.0% | |
| CCTCAAAGCTTCATTGAAGG+TGG | - | chr3_1:63624362-63624381 | Msa0367740:CDS | 45.0% | |
| CAAAGCTTCATTGAAGGTGG+TGG | - | chr3_1:63624365-63624384 | Msa0367740:CDS | 45.0% | |
| GGCTCAGAGGAATCTGATAA+AGG | - | chr3_1:63624431-63624450 | Msa0367740:CDS | 45.0% | |
| ! | ACCTGAATCAGACTCTGAAG+AGG | - | chr3_1:63624475-63624494 | Msa0367740:CDS | 45.0% |
| TCCTCTTCAGAGTCTGATTC+AGG | + | chr3_1:63624479-63624498 | None:intergenic | 45.0% | |
| ! | TGAATCAGACTCTGAAGAGG+AGG | - | chr3_1:63624478-63624497 | Msa0367740:CDS | 45.0% |
| ! | TTCTGAGAGTGCATCACTTG+TGG | - | chr3_1:63624502-63624521 | Msa0367740:CDS | 45.0% |
| GGAAGCAAGCAATGCAGATA+GGG | - | chr3_1:63624607-63624626 | Msa0367740:CDS | 45.0% | |
| AGCAATGCAGATAGGGAGAA+AGG | - | chr3_1:63624614-63624633 | Msa0367740:CDS | 45.0% | |
| GCAATGCAGATAGGGAGAAA+GGG | - | chr3_1:63624615-63624634 | Msa0367740:CDS | 45.0% | |
| ACAGTGAGGAAGATAGGAAG+AGG | - | chr3_1:63624648-63624667 | Msa0367740:CDS | 45.0% | |
| GGAAGGCTAAAACGAACCAA+AGG | - | chr3_1:63624672-63624691 | Msa0367740:CDS | 45.0% | |
| ! | TATCTTAACTTGGGCCGCTT+CGG | + | chr3_1:63624725-63624744 | None:intergenic | 45.0% |
| AAAAGCTAGTGCAGCTGGGT+CGG | - | chr3_1:63621586-63621605 | Msa0367740:CDS | 50.0% | |
| GAAAGCAGGACAGATCTCTG+GGG | - | chr3_1:63621671-63621690 | Msa0367740:CDS | 50.0% | |
| AAACCTGCCAGAGAGTCAGT+TGG | - | chr3_1:63621878-63621897 | Msa0367740:CDS | 50.0% | |
| GGCCATGATTCTTCCACTGT+TGG | - | chr3_1:63621998-63622017 | Msa0367740:CDS | 50.0% | |
| TGAGCAGTAGCTCTTGTACC+GGG | + | chr3_1:63622461-63622480 | None:intergenic | 50.0% | |
| ! | GGTTCTTCTGAAAGCCCATG+AGG | - | chr3_1:63622537-63622556 | Msa0367740:CDS | 50.0% |
| ! | TCTTCTGAAAGCCCATGAGG+CGG | - | chr3_1:63622540-63622559 | Msa0367740:CDS | 50.0% |
| AAAGCCCATGAGGCGGTTAT+TGG | - | chr3_1:63622547-63622566 | Msa0367740:CDS | 50.0% | |
| CAAGCAGGAAACCATGTCAG+GGG | + | chr3_1:63622641-63622660 | None:intergenic | 50.0% | |
| GTCAAGCAGGAAACCATGTC+AGG | + | chr3_1:63622643-63622662 | None:intergenic | 50.0% | |
| TCCTGCTTGACAAAGTCTGC+TGG | - | chr3_1:63622652-63622671 | Msa0367740:CDS | 50.0% | |
| CCTGCTTGACAAAGTCTGCT+GGG | - | chr3_1:63622653-63622672 | Msa0367740:CDS | 50.0% | |
| TTGACAAAGTCTGCTGGGAC+AGG | - | chr3_1:63622658-63622677 | Msa0367740:CDS | 50.0% | |
| ! | TCACAGTGGTACAGAGCACT+TGG | - | chr3_1:63622963-63622982 | Msa0367740:CDS | 50.0% |
| GATACAACCGTTCCTCTTCC+AGG | - | chr3_1:63623121-63623140 | Msa0367740:CDS | 50.0% | |
| CAGAAGACCTGGAAGAGGAA+CGG | + | chr3_1:63623131-63623150 | None:intergenic | 50.0% | |
| TTCTGCAGAAGACCTGGAAG+AGG | + | chr3_1:63623136-63623155 | None:intergenic | 50.0% | |
| TTCCAGGTCTTCTGCAGAAC+TGG | - | chr3_1:63623137-63623156 | Msa0367740:CDS | 50.0% | |
| AACCAGTTCTGCAGAAGACC+TGG | + | chr3_1:63623142-63623161 | None:intergenic | 50.0% | |
| ! | ATCATCATCTCTCTGGGAGG+AGG | + | chr3_1:63623189-63623208 | None:intergenic | 50.0% |
| TCGAACTGTTTCAAGCCAGC+AGG | - | chr3_1:63623284-63623303 | Msa0367740:CDS | 50.0% | |
| ! | AATTGCGATTGGTGTCCTGC+TGG | + | chr3_1:63623302-63623321 | None:intergenic | 50.0% |
| TGTGCCTTGAATCCTTGGAG+CGG | + | chr3_1:63623425-63623444 | None:intergenic | 50.0% | |
| GAGAGCTGAGAGAGCAACTT+TGG | - | chr3_1:63623506-63623525 | Msa0367740:CDS | 50.0% | |
| GAGAGCAACTTTGGTTACCC+AGG | - | chr3_1:63623515-63623534 | Msa0367740:CDS | 50.0% | |
| AGCAAGCTGCAGTTTCTCCT+GGG | + | chr3_1:63623535-63623554 | None:intergenic | 50.0% | |
| TAGCAAGCTGCAGTTTCTCC+TGG | + | chr3_1:63623536-63623555 | None:intergenic | 50.0% | |
| TTCCACGTCCACCAAAAGGA+GGG | + | chr3_1:63623602-63623621 | None:intergenic | 50.0% | |
| TTCCTTCCACGTCCACCAAA+AGG | + | chr3_1:63623606-63623625 | None:intergenic | 50.0% | |
| TGGACGTGGAAGGAAGATAC+CGG | - | chr3_1:63623611-63623630 | Msa0367740:CDS | 50.0% | |
| AACACGCTCATCAGATCTGG+TGG | + | chr3_1:63623676-63623695 | None:intergenic | 50.0% | |
| ! | GTGCAGATGAAAGTGCAGGA+GGG | + | chr3_1:63623760-63623779 | None:intergenic | 50.0% |
| ! | TGTGCAGATGAAAGTGCAGG+AGG | + | chr3_1:63623761-63623780 | None:intergenic | 50.0% |
| ! | GGTTGTGCAGATGAAAGTGC+AGG | + | chr3_1:63623764-63623783 | None:intergenic | 50.0% |
| GACATGGTCCAGAATGTTGG+AGG | - | chr3_1:63623840-63623859 | Msa0367740:CDS | 50.0% | |
| ATGGTCCAGAATGTTGGAGG+CGG | - | chr3_1:63623843-63623862 | Msa0367740:CDS | 50.0% | |
| GGGAAGCCAAGTTCTCTAAG+AGG | + | chr3_1:63624026-63624045 | None:intergenic | 50.0% | |
| CTTAGAGAACTTGGCTTCCC+CGG | - | chr3_1:63624026-63624045 | Msa0367740:CDS | 50.0% | |
| TTAGAGAACTTGGCTTCCCC+GGG | - | chr3_1:63624027-63624046 | Msa0367740:CDS | 50.0% | |
| ! | CACTTGATGGCATCAAGGAG+TGG | - | chr3_1:63624258-63624277 | Msa0367740:CDS | 50.0% |
| ! | CTTCATTGAAGGTGGTGGCT+GGG | - | chr3_1:63624370-63624389 | Msa0367740:CDS | 50.0% |
| TTCAGAATCTGAGGGCTCAG+AGG | - | chr3_1:63624418-63624437 | Msa0367740:CDS | 50.0% | |
| TGCATCACTTGTGGAGTCTG+AGG | - | chr3_1:63624511-63624530 | Msa0367740:CDS | 50.0% | |
| AGACTCTGCAGAGGATTCAG+AGG | - | chr3_1:63624550-63624569 | Msa0367740:CDS | 50.0% | |
| TGCAGAGGATTCAGAGGAAG+AGG | - | chr3_1:63624556-63624575 | Msa0367740:CDS | 50.0% | |
| AGAGGATTCAGAGGAAGAGG+CGG | - | chr3_1:63624559-63624578 | Msa0367740:CDS | 50.0% | |
| GGGAAAGACATGGGAAGAAC+TGG | - | chr3_1:63624580-63624599 | Msa0367740:CDS | 50.0% | |
| AGACATGGGAAGAACTGGAG+AGG | - | chr3_1:63624585-63624604 | Msa0367740:CDS | 50.0% | |
| GACATGGGAAGAACTGGAGA+GGG | - | chr3_1:63624586-63624605 | Msa0367740:CDS | 50.0% | |
| GGGAAGCAAGCAATGCAGAT+AGG | - | chr3_1:63624606-63624625 | Msa0367740:CDS | 50.0% | |
| TAGGGAGAAAGGGAACGAGT+CGG | - | chr3_1:63624625-63624644 | Msa0367740:CDS | 50.0% | |
| AGTCGGACAGTGAGGAAGAT+AGG | - | chr3_1:63624642-63624661 | Msa0367740:CDS | 50.0% | |
| GTGAGGAAGATAGGAAGAGG+AGG | - | chr3_1:63624651-63624670 | Msa0367740:CDS | 50.0% | |
| GGAAGATAGGAAGAGGAGGA+AGG | - | chr3_1:63624655-63624674 | Msa0367740:CDS | 50.0% | |
| AAAACGAACCAAAGGCCACG+AGG | - | chr3_1:63624680-63624699 | Msa0367740:CDS | 50.0% | |
| TCGGCATGCTACTGCTTAGA+TGG | + | chr3_1:63624706-63624725 | None:intergenic | 50.0% | |
| TAAGCAGTAGCATGCCGAAG+CGG | - | chr3_1:63624708-63624727 | Msa0367740:CDS | 50.0% | |
| GCCCTGTTCTTGTGGATGCT+TGG | - | chr3_1:63621761-63621780 | Msa0367740:CDS | 55.0% | |
| ! | ACACCAACTGACTCTCTGGC+AGG | + | chr3_1:63621884-63621903 | None:intergenic | 55.0% |
| ! | TGCCAGAGAGTCAGTTGGTG+TGG | - | chr3_1:63621883-63621902 | Msa0367740:CDS | 55.0% |
| ! | CTCCACACCAACTGACTCTC+TGG | + | chr3_1:63621888-63621907 | None:intergenic | 55.0% |
| TGAAAAGGAGGCCCCTGACA+TGG | - | chr3_1:63622627-63622646 | Msa0367740:CDS | 55.0% | |
| CCCAGCAGACTTTGTCAAGC+AGG | + | chr3_1:63622656-63622675 | None:intergenic | 55.0% | |
| AAGTCTGCTGGGACAGGCAT+TGG | - | chr3_1:63622664-63622683 | Msa0367740:CDS | 55.0% | |
| GTTCTGCCTGATGCTGTCTC+CGG | + | chr3_1:63623041-63623060 | None:intergenic | 55.0% | |
| ! | TCATCTCTCTGGGAGGAGGA+AGG | + | chr3_1:63623185-63623204 | None:intergenic | 55.0% |
| AGAGAACTGAAAGGGGTCCC+AGG | + | chr3_1:63623351-63623370 | None:intergenic | 55.0% | |
| CGTTCCGCTCCAAGGATTCA+AGG | - | chr3_1:63623418-63623437 | Msa0367740:CDS | 55.0% | |
| TCAGGCGACAAGTTGTAGCG+AGG | - | chr3_1:63623475-63623494 | Msa0367740:CDS | 55.0% | |
| CAGGCGACAAGTTGTAGCGA+GGG | - | chr3_1:63623476-63623495 | Msa0367740:CDS | 55.0% | |
| CAAAAGGAGGGCGGATCCAA+AGG | + | chr3_1:63623590-63623609 | None:intergenic | 55.0% | |
| ! | CTTTGGATCCGCCCTCCTTT+TGG | - | chr3_1:63623588-63623607 | Msa0367740:CDS | 55.0% |
| CTTCCACGTCCACCAAAAGG+AGG | + | chr3_1:63623603-63623622 | None:intergenic | 55.0% | |
| !! | CTCCTTTTGGTGGACGTGGA+AGG | - | chr3_1:63623601-63623620 | Msa0367740:CDS | 55.0% |
| GGACGTGGAAGGAAGATACC+GGG | - | chr3_1:63623612-63623631 | Msa0367740:CDS | 55.0% | |
| GAAGATACCGGGCACTCTTG+AGG | - | chr3_1:63623623-63623642 | Msa0367740:CDS | 55.0% | |
| !! | ACATGAGCCTCAAGAGTGCC+CGG | + | chr3_1:63623633-63623652 | None:intergenic | 55.0% |
| TGGTCCAGAATGTTGGAGGC+GGG | - | chr3_1:63623844-63623863 | Msa0367740:CDS | 55.0% | |
| TCTTCCCGCCTCCAACATTC+TGG | + | chr3_1:63623851-63623870 | None:intergenic | 55.0% | |
| TAGAGAACTTGGCTTCCCCG+GGG | - | chr3_1:63624028-63624047 | Msa0367740:CDS | 55.0% | |
| ACTTCAAGCGGGATGTCCTC+AGG | - | chr3_1:63624213-63624232 | Msa0367740:CDS | 55.0% | |
| ! | GCTTCATTGAAGGTGGTGGC+TGG | - | chr3_1:63624369-63624388 | Msa0367740:CDS | 55.0% |
| GAGGATTCAGAGGAAGAGGC+GGG | - | chr3_1:63624560-63624579 | Msa0367740:CDS | 55.0% | |
| AGGAAGAGGCGGGAAAGACA+TGG | - | chr3_1:63624570-63624589 | Msa0367740:CDS | 55.0% | |
| GGAAGAGGCGGGAAAGACAT+GGG | - | chr3_1:63624571-63624590 | Msa0367740:CDS | 55.0% | |
| TTAGATGGCCTCGTGGCCTT+TGG | + | chr3_1:63624691-63624710 | None:intergenic | 55.0% | |
| CTACTGCTTAGATGGCCTCG+TGG | + | chr3_1:63624698-63624717 | None:intergenic | 55.0% | |
| ! | GGAAGTGCACAAGGCGCCAA+TGG | - | chr3_1:63621563-63621582 | Msa0367740:CDS | 60.0% |
| GGAACTCCGGAGACAGCATC+AGG | - | chr3_1:63623032-63623051 | Msa0367740:CDS | 60.0% | |
| GAAACTGCTAGGCGGCTTGC+TGG | - | chr3_1:63623081-63623100 | Msa0367740:CDS | 60.0% | |
| !! | GCTTGCTGGTGGCGGTAATG+AGG | - | chr3_1:63623095-63623114 | Msa0367740:CDS | 60.0% |
| GGAAGCTTCGTTCCGCTCCA+AGG | - | chr3_1:63623410-63623429 | Msa0367740:CDS | 60.0% | |
| ! | TGGATCCGCCCTCCTTTTGG+TGG | - | chr3_1:63623591-63623610 | Msa0367740:CDS | 60.0% |
| CACGTCCACCAAAAGGAGGG+CGG | + | chr3_1:63623599-63623618 | None:intergenic | 60.0% | |
| TGTGGAGTCTGAGGACGACG+AGG | - | chr3_1:63624520-63624539 | Msa0367740:CDS | 60.0% | |
| GGAGGAGGAAGACTCTGCAG+AGG | - | chr3_1:63624541-63624560 | Msa0367740:CDS | 60.0% | |
| AGGGAACGAGTCGGACAGTG+AGG | - | chr3_1:63624634-63624653 | Msa0367740:CDS | 60.0% | |
| !! | ACTGCTAGGCGGCTTGCTGG+TGG | - | chr3_1:63623084-63623103 | Msa0367740:CDS | 65.0% |
| !! | GCTGGTGGCGGTAATGAGGC+AGG | - | chr3_1:63623099-63623118 | Msa0367740:CDS | 65.0% |
| GGAGGGCGGATCCAAAGGTC+AGG | + | chr3_1:63623585-63623604 | None:intergenic | 65.0% | |
| !! | CGCCCTCCTTTTGGTGGACG+TGG | - | chr3_1:63623597-63623616 | Msa0367740:CDS | 65.0% |
| GGAGTCTGAGGACGACGAGG+AGG | - | chr3_1:63624523-63624542 | Msa0367740:CDS | 65.0% | |
| GTCTGAGGACGACGAGGAGG+AGG | - | chr3_1:63624526-63624545 | Msa0367740:CDS | 65.0% | |
| !! | GCTAGGCGGCTTGCTGGTGG+CGG | - | chr3_1:63623087-63623106 | Msa0367740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 63621545 | 63624745 | 63621545 | ID=Msa0367740;Name=Msa0367740 |
| chr3_1 | mRNA | 63621545 | 63624745 | 63621545 | ID=Msa0367740-mRNA-1;Parent=Msa0367740;Name=Msa0367740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|1066 |
| chr3_1 | exon | 63621545 | 63624745 | 63621545 | ID=Msa0367740-mRNA-1:exon:12614;Parent=Msa0367740-mRNA-1 |
| chr3_1 | CDS | 63621545 | 63624745 | 63621545 | ID=Msa0367740-mRNA-1:cds;Parent=Msa0367740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
