AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0629430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 180 sgRNAs with CRISPR-Local

Find 1157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGATTTGGCTATATATT+TGG 0.139270 4_3:+10295154 Msa0629430:three_prime_UTR
CCCACCAGTGAAATAATTTA+AGG 0.144290 4_3:-10295052 None:intergenic
CTACTTGTATCATATGATTT+AGG 0.203328 4_3:-10279601 None:intergenic
TGTCTGCTTCTGGTATTTAT+TGG 0.225810 4_3:+10295136 Msa0629430:three_prime_UTR
TATACTTCTTTGACTGCTTT+TGG 0.245704 4_3:-10284531 None:intergenic
CTTCTGGTATTTATTGGATT+TGG 0.247314 4_3:+10295142 Msa0629430:three_prime_UTR
CTCTCCTGCTTATTTGAATC+TGG 0.252109 4_3:-10290790 None:intergenic
TTGCTGTATGATACCTTCTA+AGG 0.257285 4_3:+10283639 Msa0629430:three_prime_UTR
TCAAGAAATTATTATTGTTT+TGG 0.265480 4_3:+10278069 Msa0629430:CDS
TTTGAATGGTGCAGGGAAAA+AGG 0.273533 4_3:+10278250 Msa0629430:intron
CTTTAGTTGTCTAGATCAAT+AGG 0.277033 4_3:+10295265 Msa0629430:three_prime_UTR
GGCAGATGGTCTTATATTTC+AGG 0.279436 4_3:+10291435 Msa0629430:three_prime_UTR
TAGAACCTGTTGAGAGAAAC+TGG 0.279933 4_3:-10288236 None:intergenic
CATCTTCCATCTTTCATAGA+AGG 0.284381 4_3:-10291147 None:intergenic
AAAGTCAACTGAATTTAAAT+TGG 0.286326 4_3:-10291724 None:intergenic
GATATGATCTGGAACCATTC+AGG 0.296869 4_3:+10291243 Msa0629430:three_prime_UTR
GAAACTCTTGGATGGGAATA+AGG 0.299659 4_3:+10291909 Msa0629430:three_prime_UTR
GTGATTCATTGTGGTTAGAT+AGG 0.301042 4_3:+10295018 Msa0629430:three_prime_UTR
TAACCATTGGTGTCTGCTTC+TGG 0.303633 4_3:+10295126 Msa0629430:three_prime_UTR
TATATCCATACCTGCAAATC+AGG 0.305254 4_3:-10284948 None:intergenic
CTGTAAGTATTAAACTCATT+TGG 0.310885 4_3:-10294768 None:intergenic
GTACAATGCATCAATATAAT+CGG 0.312682 4_3:-10284799 None:intergenic
CTGTTATCAAACACTTAGAT+TGG 0.314711 4_3:+10286690 Msa0629430:three_prime_UTR
AGAACACTCGATGATCTTTC+CGG 0.326134 4_3:-10294688 None:intergenic
TTCAATGACTGCATCTTTCC+TGG 0.327539 4_3:+10283679 Msa0629430:three_prime_UTR
ATACCTTATATATGATCTTA+TGG 0.335734 4_3:+10290816 Msa0629430:three_prime_UTR
TCCAAATGAGGTTTCCTTGC+AGG 0.339727 4_3:+10289378 Msa0629430:three_prime_UTR
GACCCACCATTTCACATTGC+TGG 0.345896 4_3:+10290741 Msa0629430:three_prime_UTR
TTCAGTTGACTTTCTGTTTG+AGG 0.348533 4_3:+10291734 Msa0629430:three_prime_UTR
AAACACTTAGATTGGGTGTT+GGG 0.348829 4_3:+10286698 Msa0629430:three_prime_UTR
CACACCCAGTTTCTCTCAAC+AGG 0.355691 4_3:+10288231 Msa0629430:three_prime_UTR
AGTCCCAGGCCCTGATTTGC+AGG 0.355862 4_3:+10284938 Msa0629430:three_prime_UTR
CCACTTTCTATACGTTCTTC+AGG 0.357580 4_3:-10278440 None:intergenic
AGAGGGTATCAAGCATCTTA+AGG 0.368989 4_3:+10284116 Msa0629430:three_prime_UTR
AGATCAATAGGGTTAGGTTT+AGG 0.374635 4_3:+10295277 Msa0629430:three_prime_UTR
TGTTTGTAGGGTAGAAGATC+AGG 0.375622 4_3:+10295084 Msa0629430:three_prime_UTR
TCTTGATTTGCAGCTTGGTC+TGG 0.383493 4_3:+10284041 Msa0629430:intron
TTGCCATAAGATCATATATA+AGG 0.384966 4_3:-10290819 None:intergenic
GTGATTATAAGTTATTGAAA+TGG 0.390631 4_3:+10295336 Msa0629430:three_prime_UTR
GAAAGATCATCGAGTGTTCT+TGG 0.397309 4_3:+10294691 Msa0629430:three_prime_UTR
TAATCGGGTTTATAGATTCC+TGG 0.398054 4_3:-10284783 None:intergenic
ACATAGCACGCATTAGATAA+TGG 0.401286 4_3:-10284603 None:intergenic
CAACCATGTTTCAGTAATAG+AGG 0.418216 4_3:+10290843 Msa0629430:three_prime_UTR
TTCGCAGGAATATCCATTCC+AGG 0.421148 4_3:-10294725 None:intergenic
TCCTGCAAGGAAACCTCATT+TGG 0.422217 4_3:-10289379 None:intergenic
TCACCAAGAGGAACCTTAGA+AGG 0.423450 4_3:-10283652 None:intergenic
TTGTCTAGATCAATAGGGTT+AGG 0.424051 4_3:+10295271 Msa0629430:three_prime_UTR
GAATCACCTTCGCTGCTTTG+CGG 0.427455 4_3:-10295002 None:intergenic
AGAGGACATACACAATTTCC+AGG 0.428565 4_3:+10288206 Msa0629430:three_prime_UTR
GTTGATGAATTAGTAGTTGT+TGG 0.429211 4_3:+10278276 Msa0629430:CDS
AATGCCTTAAATTATTTCAC+TGG 0.432603 4_3:+10295048 Msa0629430:three_prime_UTR
TGTAGTAAGGATTTCTGCTC+TGG 0.435361 4_3:-10291220 None:intergenic
TGCTTCCATCGGCAGGTTGA+AGG 0.440873 4_3:+10291847 Msa0629430:intron
CACCATCCAGCAATGTGAAA+TGG 0.442513 4_3:-10290747 None:intergenic
TACAATGCATCAATATAATC+GGG 0.448524 4_3:-10284798 None:intergenic
TTTAGTTGTCTAGATCAATA+GGG 0.449208 4_3:+10295266 Msa0629430:three_prime_UTR
AAAGATCATCGAGTGTTCTT+GGG 0.450552 4_3:+10294692 Msa0629430:three_prime_UTR
TGTTATCAAACACTTAGATT+GGG 0.458416 4_3:+10286691 Msa0629430:three_prime_UTR
TATGTCAATGTCTGTTACTC+AGG 0.458504 4_3:+10284621 Msa0629430:three_prime_UTR
TGATGCACGGGTCTATCATC+TGG 0.459875 4_3:-10279532 None:intergenic
TGATGTCGTTCGTGATTCCT+AGG 0.470600 4_3:-10291191 None:intergenic
CAGCAAATCTCCTGGCCTGA+TGG 0.473077 4_3:-10283622 None:intergenic
GAAAATTCTAACCAATGTAA+TGG 0.474535 4_3:-10295385 None:intergenic
TCCAGATCATATCTGTAGTA+AGG 0.475878 4_3:-10291233 None:intergenic
AGGTTGCTTATGTAATTAGT+TGG 0.477860 4_3:+10295188 Msa0629430:three_prime_UTR
TCATGAGTACGTGGTACATA+AGG 0.478867 4_3:-10291678 None:intergenic
TGATACAAGTAGGCTTCCTC+CGG 0.479076 4_3:+10279612 Msa0629430:three_prime_UTR
CTAATTACATAAGCAACCTT+AGG 0.479770 4_3:-10295184 None:intergenic
TGTAAATCAGTTCGTCTATG+AGG 0.480532 4_3:+10284290 Msa0629430:three_prime_UTR
GCCTTAAATTATTTCACTGG+TGG 0.481047 4_3:+10295051 Msa0629430:three_prime_UTR
GAGGATGATGATGGAGTCCC+AGG 0.483153 4_3:+10284924 Msa0629430:three_prime_UTR
TGGTTAGATTGCCCTCCATC+AGG 0.483908 4_3:+10283607 Msa0629430:three_prime_UTR
CATACCTGCAAATCAGGGCC+TGG 0.484563 4_3:-10284942 None:intergenic
TGGGAGAATGAGATGTTTGT+AGG 0.486998 4_3:+10295071 Msa0629430:three_prime_UTR
TGGAAATTGTGTATGTCCTC+TGG 0.487711 4_3:-10288204 None:intergenic
GGGAATAAGGTTGCTTTCAA+AGG 0.488951 4_3:+10291922 Msa0629430:three_prime_UTR
ATTTATCTGTTCTAATTCGC+AGG 0.489727 4_3:-10294740 None:intergenic
ATACCTTCTAAGGTTCCTCT+TGG 0.491347 4_3:+10283649 Msa0629430:three_prime_UTR
TCCTTACTACAGATATGATC+TGG 0.492566 4_3:+10291232 Msa0629430:three_prime_UTR
TTGATGAATTAGTAGTTGTT+GGG 0.492851 4_3:+10278277 Msa0629430:CDS
AGAGAAACTGGGTGTGAACC+TGG 0.494965 4_3:-10288224 None:intergenic
TGATTCATTGTGGTTAGATA+GGG 0.496184 4_3:+10295019 Msa0629430:three_prime_UTR
ATCGGCAGGTTGAAGGTGAT+CGG 0.499299 4_3:+10291854 Msa0629430:intron
GGAGGACAAACTACCATCTC+AGG 0.503101 4_3:-10284843 None:intergenic
GATCTTTCCGGAATAAAATG+AGG 0.503180 4_3:-10294676 None:intergenic
ATGAAATTTGTGACGCAACT+CGG 0.504231 4_3:-10295228 None:intergenic
ACTCCATCATCATCCTCGTC+AGG 0.505855 4_3:-10284918 None:intergenic
CCTTAAATTATTTCACTGGT+GGG 0.508594 4_3:+10295052 Msa0629430:three_prime_UTR
TCGGCAGGTTGAAGGTGATC+GGG 0.508639 4_3:+10291855 Msa0629430:intron
TCATCTGTGAGCTTGTCTCA+TGG 0.508881 4_3:-10286606 None:intergenic
GGTAGTTTGTCCTCCTACTC+CGG 0.511592 4_3:+10284851 Msa0629430:three_prime_UTR
TACACATGGGCATAATCGTA+CGG 0.511801 4_3:+10284567 Msa0629430:three_prime_UTR
TCTTCATCTTCCTCCGGTAC+CGG 0.513155 4_3:-10278374 None:intergenic
ATATGATCTGGAACCATTCA+GGG 0.513320 4_3:+10291244 Msa0629430:three_prime_UTR
ATACCTGCAAATCAGGGCCT+GGG 0.513462 4_3:-10284941 None:intergenic
TCTTCTGAACTTGATCTCAA+TGG 0.513742 4_3:+10284885 Msa0629430:three_prime_UTR
TATGTATGTGATATATACAT+TGG 0.517188 4_3:+10295408 Msa0629430:three_prime_UTR
CATAAGCAACCTTAGGATGA+TGG 0.518880 4_3:-10295177 None:intergenic
TTCAAGATGCATGCCCTGAA+TGG 0.520586 4_3:-10291257 None:intergenic
TTTGAATGCATCTCCGGTAC+CGG 0.521510 4_3:+10278361 Msa0629430:three_prime_UTR
ATCTTCCATCTTTCATAGAA+GGG 0.521972 4_3:-10291146 None:intergenic
CTCATGAAGGACTCTTAAAG+TGG 0.522723 4_3:+10291694 Msa0629430:three_prime_UTR
ATGATGTTAATAACAATGGA+TGG 0.526023 4_3:+10289317 Msa0629430:three_prime_UTR
CTCATGCCGCAAAGCAGCGA+AGG 0.526270 4_3:+10294996 Msa0629430:three_prime_UTR
CTATTGATCTAGACAACTAA+AGG 0.526569 4_3:-10295264 None:intergenic
TGAGTTTAATACTTACAGAA+AGG 0.527213 4_3:+10294773 Msa0629430:three_prime_UTR
GCCTTCCCATGTATGCGGAC+AGG 0.528594 4_3:+10294942 Msa0629430:three_prime_UTR
ACGGGGAAAGAAGAAACTCT+TGG 0.528706 4_3:+10291897 Msa0629430:three_prime_UTR
CAAACACTTAGATTGGGTGT+TGG 0.529106 4_3:+10286697 Msa0629430:three_prime_UTR
TATATTTGGCCATCATCCTA+AGG 0.530710 4_3:+10295168 Msa0629430:three_prime_UTR
CACATTGCTGGATGGTGAGA+TGG 0.531583 4_3:+10290753 Msa0629430:three_prime_UTR
CTTGCCAGATTCAAATAAGC+AGG 0.531786 4_3:+10290786 Msa0629430:three_prime_UTR
AATGGATTTGAATGCATCTC+CGG 0.531795 4_3:+10278355 Msa0629430:three_prime_UTR
AAAATATCTTCATCTTCCTC+CGG 0.532283 4_3:-10278380 None:intergenic
AGACTCAAGTTCCATTACAT+TGG 0.532366 4_3:+10295374 Msa0629430:three_prime_UTR
GTTCCTGACGAGGATGATGA+TGG 0.533773 4_3:+10284915 Msa0629430:three_prime_UTR
CCTGAAGAACGTATAGAAAG+TGG 0.534848 4_3:+10278440 Msa0629430:three_prime_UTR
CAAATCTCCTGGCCTGATGG+AGG 0.537610 4_3:-10283619 None:intergenic
CACCATTTCACATTGCTGGA+TGG 0.538269 4_3:+10290745 Msa0629430:three_prime_UTR
AACTCGGCAGCACTGCTGCA+AGG 0.544386 4_3:-10295212 None:intergenic
ATTGTCGAAGGGTCCAAATG+AGG 0.544433 4_3:+10289366 Msa0629430:three_prime_UTR
GGAAAGAAGAAACTCTTGGA+TGG 0.547625 4_3:+10291901 Msa0629430:three_prime_UTR
ACATAAACATATGTAACCAT+TGG 0.547919 4_3:+10295113 Msa0629430:three_prime_UTR
ATGCTTGATGATAGTTGCAA+TGG 0.555423 4_3:+10278337 Msa0629430:three_prime_UTR
CTGCTTATTTGAATCTGGCA+AGG 0.557177 4_3:-10290785 None:intergenic
TGGAGCTGATATAGCACGCC+GGG 0.560602 4_3:+10278460 Msa0629430:three_prime_UTR
TCCTGTCCGCATACATGGGA+AGG 0.564771 4_3:-10294943 None:intergenic
AGATTGCCCTCCATCAGGCC+AGG 0.564806 4_3:+10283612 Msa0629430:three_prime_UTR
CATCCAGCAATGTGAAATGG+TGG 0.570886 4_3:-10290744 None:intergenic
CTAAATCATATGATACAAGT+AGG 0.572044 4_3:+10279602 Msa0629430:three_prime_UTR
AACACTTAGATTGGGTGTTG+GGG 0.573445 4_3:+10286699 Msa0629430:three_prime_UTR
AGCGACCCTTCTATGAAAGA+TGG 0.580254 4_3:+10291141 Msa0629430:intron
TTGCAGGAGTACTACTAATG+AGG 0.583101 4_3:+10289394 Msa0629430:three_prime_UTR
GTATCATACAGCAAATCTCC+TGG 0.583699 4_3:-10283630 None:intergenic
TTGTTCAGATTCAATGCAGG+GGG 0.583802 4_3:+10284241 Msa0629430:intron
TATGTACCACGTACTCATGA+AGG 0.583824 4_3:+10291681 Msa0629430:three_prime_UTR
TTATTATTATGCAACATGGA+AGG 0.585034 4_3:+10289277 Msa0629430:three_prime_UTR
AAATCTCCTGGCCTGATGGA+GGG 0.585045 4_3:-10283618 None:intergenic
CATCATATACCGTGTACCAT+CGG 0.585178 4_3:-10289300 None:intergenic
GATTCCTGGAGGGCGTGCAT+CGG 0.585482 4_3:-10284769 None:intergenic
GTATATGATGTTAATAACAA+TGG 0.587170 4_3:+10289313 Msa0629430:three_prime_UTR
CATGGAAGGCCGATGGTACA+CGG 0.588207 4_3:+10289291 Msa0629430:three_prime_UTR
GTAGAACGAGTATCTGAAGT+AGG 0.593969 4_3:+10277983 None:intergenic
ACACATGGGCATAATCGTAC+GGG 0.596017 4_3:+10284568 Msa0629430:three_prime_UTR
ATACTTGTTCATTGTACACA+TGG 0.598629 4_3:+10284553 Msa0629430:three_prime_UTR
ACATACTGTTGAGCATGTAT+CGG 0.601317 4_3:-10278413 None:intergenic
AGAAAGAAGTGATTGAACCT+AGG 0.602136 4_3:+10291174 Msa0629430:three_prime_UTR
GAAAGAAGAAACTCTTGGAT+GGG 0.603849 4_3:+10291902 Msa0629430:three_prime_UTR
ATCTTTCCGGAATAAAATGA+GGG 0.606895 4_3:-10294675 None:intergenic
AAACTCTCACATGAGGCAGA+TGG 0.608691 4_3:+10291421 Msa0629430:three_prime_UTR
GGGAGAATGAGATGTTTGTA+GGG 0.614069 4_3:+10295072 Msa0629430:three_prime_UTR
TTTATCCTGTCCGCATACAT+GGG 0.615995 4_3:-10294947 None:intergenic
AACGTTATTATTATGCAACA+TGG 0.617616 4_3:+10289273 Msa0629430:three_prime_UTR
TACTTGTTCATTGTACACAT+GGG 0.617647 4_3:+10284554 Msa0629430:three_prime_UTR
GATACAAGTAGGCTTCCTCC+GGG 0.618003 4_3:+10279613 Msa0629430:three_prime_UTR
ATATCCATACCTGCAAATCA+GGG 0.619101 4_3:-10284947 None:intergenic
ACCACTAGTGTGCAGGCCAG+AGG 0.620774 4_3:+10288188 Msa0629430:intron
CGGGTTTATAGATTCCTGGA+GGG 0.626209 4_3:-10284779 None:intergenic
GGTGACTGTGAATGATGCAC+GGG 0.626615 4_3:-10279544 None:intergenic
ATCCAGCAATGTGAAATGGT+GGG 0.633078 4_3:-10290743 None:intergenic
TGATGTTAATAACAATGGAT+GGG 0.637271 4_3:+10289318 Msa0629430:three_prime_UTR
GAATGCATCTCCGGTACCGG+AGG 0.637362 4_3:+10278364 Msa0629430:three_prime_UTR
GCAGCGAAGGTGATTCATTG+TGG 0.641874 4_3:+10295009 Msa0629430:three_prime_UTR
TGGTGAAGCAGTTCCTGACG+AGG 0.650559 4_3:+10284905 Msa0629430:three_prime_UTR
TCATTGAATGATTCACCAAG+AGG 0.656337 4_3:-10283664 None:intergenic
AGGTGACTGTGAATGATGCA+CGG 0.658854 4_3:-10279545 None:intergenic
GAACCTCTATTACTGAAACA+TGG 0.658855 4_3:-10290846 None:intergenic
TCATTAGTAGTACTCCTGCA+AGG 0.662132 4_3:-10289392 None:intergenic
ATACCAGAAGCAGACACCAA+TGG 0.662343 4_3:-10295129 None:intergenic
TATGCAACATGGAAGGCCGA+TGG 0.664710 4_3:+10289284 Msa0629430:three_prime_UTR
TTTGTCCTCCTACTCCGGAG+TGG 0.668870 4_3:+10284856 Msa0629430:three_prime_UTR
AATTCGCCTTCCCATGTATG+CGG 0.681083 4_3:+10294937 Msa0629430:three_prime_UTR
TTTGTTCAGATTCAATGCAG+GGG 0.682706 4_3:+10284240 Msa0629430:intron
TCGGGTTTATAGATTCCTGG+AGG 0.683414 4_3:-10284780 None:intergenic
AGAACCTGTTGAGAGAAACT+GGG 0.685395 4_3:-10288235 None:intergenic
TATAGTTGTTGATCATATCG+AGG 0.691004 4_3:-10279565 None:intergenic
GTGGAGCTGATATAGCACGC+CGG 0.692109 4_3:+10278459 Msa0629430:three_prime_UTR
AAGAGTCCTTCATGAGTACG+TGG 0.699809 4_3:-10291687 None:intergenic
TGTCACTGGATAGTATCGAG+AGG 0.717845 4_3:-10284082 None:intergenic
CATAAAAGACAACATCACAG+AGG 0.751598 4_3:+10294886 Msa0629430:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAAAATATTTTTTTTA+TGG + chr4_3:10280196-10280215 Msa0629430:intron 0.0%
!!! ATTTTTTTTTCAAAATTAGT+CGG - chr4_3:10278607-10278626 None:intergenic 10.0%
!!! TTGATAATATTATGAATTAA+CGG - chr4_3:10280348-10280367 None:intergenic 10.0%
!!! TTTATTAAAATTAAAGTGTT+TGG + chr4_3:10280696-10280715 Msa0629430:intron 10.0%
!! TAAATATAAAATGACATAAA+AGG + chr4_3:10280744-10280763 Msa0629430:intron 10.0%
!! AATAAACAATAAATAAATAG+TGG - chr4_3:10280961-10280980 None:intergenic 10.0%
!! AATAAGAAAATATATTGTAT+AGG + chr4_3:10284452-10284471 Msa0629430:intron 10.0%
!! TTATTAAAAATATAGATGTT+TGG + chr4_3:10285934-10285953 Msa0629430:intron 10.0%
!!! TTTAATTTTTTTAAACTAGA+GGG + chr4_3:10286425-10286444 Msa0629430:intron 10.0%
!! TTTAAATTATATTACAACAA+AGG + chr4_3:10286832-10286851 Msa0629430:intron 10.0%
!! ATATATATATATATTGAGAA+GGG + chr4_3:10287129-10287148 Msa0629430:intron 10.0%
!! TTAATTAATATAAAGATCAA+TGG - chr4_3:10287202-10287221 None:intergenic 10.0%
!! TTGATCTTTATATTAATTAA+TGG + chr4_3:10287202-10287221 Msa0629430:intron 10.0%
!!! AATAAAAATTAGTTTTCAAT+TGG + chr4_3:10287504-10287523 Msa0629430:intron 10.0%
!!! TTGATTTTAATAGTAATTAA+TGG - chr4_3:10287685-10287704 None:intergenic 10.0%
!! TTAATTACTATTAAAATCAA+AGG + chr4_3:10287685-10287704 Msa0629430:intron 10.0%
!! TATATATATATATATGAGAA+GGG - chr4_3:10287758-10287777 None:intergenic 10.0%
!! ATATATATATATATATGAGA+AGG - chr4_3:10287759-10287778 None:intergenic 10.0%
!! ATTAATTATACATATAAAGT+AGG + chr4_3:10288305-10288324 Msa0629430:intron 10.0%
!! AAACTTTAACATTAAATAAT+GGG - chr4_3:10289013-10289032 None:intergenic 10.0%
!! AAAACTTTAACATTAAATAA+TGG - chr4_3:10289014-10289033 None:intergenic 10.0%
!! AAAAATGTAAAAATTAATTG+GGG - chr4_3:10289188-10289207 None:intergenic 10.0%
!! CAAAAAATGTAAAAATTAAT+TGG - chr4_3:10289190-10289209 None:intergenic 10.0%
!!! ATATTTTTGAAATGTTTTTT+AGG + chr4_3:10291336-10291355 Msa0629430:intron 10.0%
!! TTTATTAAAAAAAATCGAAA+TGG + chr4_3:10293966-10293985 Msa0629430:intron 10.0%
! CCCCCCCCCCCCCCCCCCCC+CGG - chr4_3:10294186-10294205 None:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG + chr4_3:10294184-10294203 Msa0629430:intron 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:10294185-10294204 Msa0629430:intron 100.0%
!!! TCAAGAAATTATTATTGTTT+TGG + chr4_3:10278069-10278088 Msa0629430:CDS 15.0%
!!! ATTATTGTTTTGGTATTTAA+CGG + chr4_3:10278079-10278098 Msa0629430:intron 15.0%
!! AAATTAGGATTTATGATTAA+AGG + chr4_3:10279045-10279064 Msa0629430:intron 15.0%
!! TGAAAAATTTAAACTTTACA+TGG + chr4_3:10279864-10279883 Msa0629430:intron 15.0%
!! GAAAAATTTAAACTTTACAT+GGG + chr4_3:10279865-10279884 Msa0629430:intron 15.0%
!!! TTTGGTTCAATTAAAAAATT+TGG - chr4_3:10280457-10280476 None:intergenic 15.0%
!! TAAATTAACAAGGTTAAAAT+TGG + chr4_3:10281157-10281176 Msa0629430:intron 15.0%
!!! ATATAATTTGTAGATGTTTA+AGG - chr4_3:10281356-10281375 None:intergenic 15.0%
!!! TTTTAGACAAGAATATTTAA+TGG - chr4_3:10281413-10281432 None:intergenic 15.0%
!! CACAAAAATAATATATTTGA+TGG - chr4_3:10281443-10281462 None:intergenic 15.0%
!!! AAAAAAAATCTAAAACAAAC+AGG + chr4_3:10281991-10282010 Msa0629430:intron 15.0%
!!! TTATTTTATTCTTTTCAAAC+AGG + chr4_3:10283583-10283602 Msa0629430:intron 15.0%
!!! TATTTTATTCTTTTCAAACA+GGG + chr4_3:10283584-10283603 Msa0629430:intron 15.0%
!!! AAATGAAGTATTACATTTTT+AGG - chr4_3:10283775-10283794 None:intergenic 15.0%
!! AAAAATGTAATACTTCATTT+AGG + chr4_3:10283775-10283794 Msa0629430:intron 15.0%
!!! CCTTTTTATATTTTCTTTTT+TGG - chr4_3:10283891-10283910 None:intergenic 15.0%
!! CCAAAAAAGAAAATATAAAA+AGG + chr4_3:10283888-10283907 Msa0629430:intron 15.0%
!!! ATATATTTTCTTATTTACCA+AGG - chr4_3:10284447-10284466 None:intergenic 15.0%
!! AAACAATAACATTGTTAAAA+AGG - chr4_3:10284482-10284501 None:intergenic 15.0%
!! AATGTTATTGTTTATATTTC+AGG + chr4_3:10284489-10284508 Msa0629430:intron 15.0%
!! TTAAAGTAGGTATTATAATT+TGG + chr4_3:10285320-10285339 Msa0629430:intron 15.0%
!! TAAAGTAGGTATTATAATTT+GGG + chr4_3:10285321-10285340 Msa0629430:intron 15.0%
!! TTAATAAAATAACGTTTGAT+TGG - chr4_3:10285921-10285940 None:intergenic 15.0%
!!! GTTTAATTTTTTTAAACTAG+AGG + chr4_3:10286424-10286443 Msa0629430:intron 15.0%
!!! TTAATTTTTTTAAACTAGAG+GGG + chr4_3:10286426-10286445 Msa0629430:intron 15.0%
!! ATAATTTAATCATCTATCAA+TGG + chr4_3:10286461-10286480 Msa0629430:intron 15.0%
!!! ATGAATTTGAAGTTTTAATA+AGG + chr4_3:10286783-10286802 Msa0629430:intron 15.0%
!!! ATTTATCTAAAATTGGAAAA+AGG - chr4_3:10287100-10287119 None:intergenic 15.0%
!!! TTTCCAATTTTAGATAAATT+TGG + chr4_3:10287101-10287120 Msa0629430:intron 15.0%
!! GATATATATATATATTGAGA+AGG + chr4_3:10287128-10287147 Msa0629430:intron 15.0%
!! ATTAATTACTATTAATCCAT+AGG + chr4_3:10287230-10287249 Msa0629430:intron 15.0%
!! TTAATTACTATTAATCCATA+GGG + chr4_3:10287231-10287250 Msa0629430:intron 15.0%
!!! TTTATCTTATTTTCTTGAAA+GGG - chr4_3:10287281-10287300 None:intergenic 15.0%
!!! TTTTATCTTATTTTCTTGAA+AGG - chr4_3:10287282-10287301 None:intergenic 15.0%
!! ATATACCTTTAATTAATATC+CGG + chr4_3:10287353-10287372 Msa0629430:intron 15.0%
!! TATGTTTATTATATGATCTA+TGG + chr4_3:10287393-10287412 Msa0629430:intron 15.0%
!! TTTCAAAAGAATATACATAT+TGG - chr4_3:10288011-10288030 None:intergenic 15.0%
!!! TTTCTTTTTTACACAATTAT+TGG - chr4_3:10289093-10289112 None:intergenic 15.0%
!! TATATTAAATTTGGTTATGT+TGG + chr4_3:10289220-10289239 Msa0629430:intron 15.0%
!!! ATATTTGAAATTTCTAATAG+TGG + chr4_3:10289431-10289450 Msa0629430:intron 15.0%
!! TTTACAATATATTATGAGTA+AGG + chr4_3:10289614-10289633 Msa0629430:intron 15.0%
!!! ACTGATAATTTGTTATATTT+TGG + chr4_3:10290697-10290716 Msa0629430:intron 15.0%
!! CATAATTATAAAAACAAAGT+TGG - chr4_3:10291976-10291995 None:intergenic 15.0%
!! AAATTGAAATTCAATTATCT+AGG + chr4_3:10292262-10292281 Msa0629430:intron 15.0%
!! TAATAAATAAAAGGGTTAAT+AGG + chr4_3:10292291-10292310 Msa0629430:intron 15.0%
!! CAAATGGAATTAAAAAAATT+TGG - chr4_3:10292526-10292545 None:intergenic 15.0%
!! TTTAATAAAGGAAATTCAAA+TGG - chr4_3:10292542-10292561 None:intergenic 15.0%
!! CATCTTAAAAAAAAAAAATC+TGG - chr4_3:10293643-10293662 None:intergenic 15.0%
!! TGATTAAATAATTCATGAAT+AGG + chr4_3:10294396-10294415 Msa0629430:intron 15.0%
!! GATAAAAGAAACTAAAAATT+GGG - chr4_3:10294812-10294831 None:intergenic 15.0%
!! AGATAAAAGAAACTAAAAAT+TGG - chr4_3:10294813-10294832 None:intergenic 15.0%
!!! TCTTTTAAAAGTACAAAAAC+AGG + chr4_3:10279311-10279330 Msa0629430:intron 20.0%
!! AAAAGAATCATTGTTTCAAA+TGG - chr4_3:10279366-10279385 None:intergenic 20.0%
!!! TTTGAAACAATGATTCTTTT+TGG + chr4_3:10279366-10279385 Msa0629430:intron 20.0%
!! AATAAATCCACTTCAAATAT+AGG - chr4_3:10279741-10279760 None:intergenic 20.0%
!!! TTTTTATGGAAATTTTTGAC+CGG + chr4_3:10280210-10280229 Msa0629430:intron 20.0%
!! CAATAAAACACAAAAAGATT+TGG - chr4_3:10280475-10280494 None:intergenic 20.0%
!!! TTATTATTCTATGTGCTTTT+AGG + chr4_3:10280498-10280517 Msa0629430:intron 20.0%
!!! TATTATTCTATGTGCTTTTA+GGG + chr4_3:10280499-10280518 Msa0629430:intron 20.0%
!! TTAGAAAAATAATATGCTAG+TGG + chr4_3:10281588-10281607 Msa0629430:intron 20.0%
!! TAGAAAAATAATATGCTAGT+GGG + chr4_3:10281589-10281608 Msa0629430:intron 20.0%
!!! GATTTTCTTTAAAGACTTTT+GGG - chr4_3:10281951-10281970 None:intergenic 20.0%
!!! AGATTTTCTTTAAAGACTTT+TGG - chr4_3:10281952-10281971 None:intergenic 20.0%
!! TTAATGAGATTGTTTACATT+AGG + chr4_3:10282298-10282317 Msa0629430:intron 20.0%
!! TAATGAGATTGTTTACATTA+GGG + chr4_3:10282299-10282318 Msa0629430:intron 20.0%
!! TATAAAATTGTGTCAAAAGA+CGG - chr4_3:10283147-10283166 None:intergenic 20.0%
!!! ACAATTTTATAGACATGTTA+GGG + chr4_3:10283156-10283175 Msa0629430:intron 20.0%
!! AATAGCAAGTTAACTTATTT+AGG + chr4_3:10283184-10283203 Msa0629430:intron 20.0%
!!! TACAACTTTCTTTAAAACTT+TGG + chr4_3:10284178-10284197 Msa0629430:intron 20.0%
!!! ACATAGTGAATTTTGATTAT+TGG + chr4_3:10284970-10284989 Msa0629430:intron 20.0%
!!! CTACTTTAAAAGATTTTCAT+AGG - chr4_3:10285309-10285328 None:intergenic 20.0%
!!! CTATGAAAATCTTTTAAAGT+AGG + chr4_3:10285307-10285326 Msa0629430:intron 20.0%
!! GTTTAATAATAGTCTAATCA+TGG + chr4_3:10285524-10285543 Msa0629430:intron 20.0%
!!! TTTCATATAATCTAAGACTT+TGG - chr4_3:10285632-10285651 None:intergenic 20.0%
!! TTAGTTAACATAAAACAAAC+TGG - chr4_3:10285737-10285756 None:intergenic 20.0%
!!! AATTATAAAAATGAGCCTTT+TGG + chr4_3:10286159-10286178 Msa0629430:intron 20.0%
!! ACTAATACTCATAAAAATTG+TGG + chr4_3:10286528-10286547 Msa0629430:intron 20.0%
!! CATATCAAAACATGATTTAA+TGG - chr4_3:10288272-10288291 None:intergenic 20.0%
!! CAGTGAATCTATATTAAATT+TGG + chr4_3:10289211-10289230 Msa0629430:intron 20.0%
!! GTATATGATGTTAATAACAA+TGG + chr4_3:10289313-10289332 Msa0629430:three_prime_UTR 20.0%
!! TAAAGAAACAAAAGTCATTA+TGG - chr4_3:10289521-10289540 None:intergenic 20.0%
!!! TTTGTTTCTTTACATTATCT+AGG + chr4_3:10289529-10289548 Msa0629430:intron 20.0%
!!! TTGTTTCTTTACATTATCTA+GGG + chr4_3:10289530-10289549 Msa0629430:intron 20.0%
!!! TGTAACAATTTTTAAAACAG+TGG - chr4_3:10290310-10290329 None:intergenic 20.0%
!!! TTTGTTATATTTTGGTTCTA+AGG + chr4_3:10290705-10290724 Msa0629430:intron 20.0%
!!! TTGTTATATTTTGGTTCTAA+GGG + chr4_3:10290706-10290725 Msa0629430:intron 20.0%
!! ATACCTTATATATGATCTTA+TGG + chr4_3:10290816-10290835 Msa0629430:three_prime_UTR 20.0%
!! AATATGTTGTGATCAATATA+AGG - chr4_3:10291283-10291302 None:intergenic 20.0%
!!! TTTGAAATGTTTTTTAGGTA+AGG + chr4_3:10291341-10291360 Msa0629430:intron 20.0%
!! AAAGTCAACTGAATTTAAAT+TGG - chr4_3:10291727-10291746 None:intergenic 20.0%
!! AATTAAACAAGCCAAAATTA+AGG + chr4_3:10292118-10292137 Msa0629430:intron 20.0%
!! ATTAAACAAGCCAAAATTAA+GGG + chr4_3:10292119-10292138 Msa0629430:intron 20.0%
!! TTCCATTTATATTGAAGAAA+AGG + chr4_3:10292210-10292229 Msa0629430:intron 20.0%
!!! TACCTTTTCTTCAATATAAA+TGG - chr4_3:10292215-10292234 None:intergenic 20.0%
!! AGGTCAATGTAATAAATAAA+AGG + chr4_3:10292244-10292263 Msa0629430:intron 20.0%
!! GGTCAATGTAATAAATAAAA+GGG + chr4_3:10292245-10292264 Msa0629430:intron 20.0%
!!! ATCTCCAAGTTTTTTTTTTA+CGG - chr4_3:10292359-10292378 None:intergenic 20.0%
!! AAAGAATCTTTAAATTACGA+GGG - chr4_3:10294136-10294155 None:intergenic 20.0%
!!! ATGTTTTTGTTGATCTAAAA+TGG + chr4_3:10292808-10292827 Msa0629430:intron 20.0%
!!! TGTTTTTGTTGATCTAAAAT+GGG + chr4_3:10292809-10292828 Msa0629430:intron 20.0%
!!! AATTGTGTTATTTGTTAAGT+TGG + chr4_3:10293763-10293782 Msa0629430:intron 20.0%
!!! ATTGTGTTATTTGTTAAGTT+GGG + chr4_3:10293764-10293783 Msa0629430:intron 20.0%
!!! ATTTAAAGATTCTTTGGTTT+TGG - chr4_3:10292390-10292409 None:intergenic 20.0%
!! AAAGAATCTTTAAATTACGA+GGG + chr4_3:10294136-10294155 Msa0629430:intron 20.0%
!!! TCCAAGTTTTTTTTTTTTAC+CGG + chr4_3:10294165-10294184 Msa0629430:intron 20.0%
!!! CAATTTTATTTAGGGTTAAT+AGG - chr4_3:10294248-10294267 None:intergenic 20.0%
!!! GGGAATTTCAATTTTATTTA+GGG - chr4_3:10294256-10294275 None:intergenic 20.0%
!!! TGGGAATTTCAATTTTATTT+AGG - chr4_3:10294257-10294276 None:intergenic 20.0%
!!! AGCCATTTACTTAATTTTAT+AGG + chr4_3:10294853-10294872 Msa0629430:intron 20.0%
!! CACCTATAAAATTAAGTAAA+TGG - chr4_3:10294858-10294877 None:intergenic 20.0%
!! GTGATTATAAGTTATTGAAA+TGG + chr4_3:10295336-10295355 Msa0629430:three_prime_UTR 20.0%
!! TATGTATGTGATATATACAT+TGG + chr4_3:10295408-10295427 Msa0629430:three_prime_UTR 20.0%
! TTGATGAATTAGTAGTTGTT+GGG + chr4_3:10278277-10278296 Msa0629430:CDS 25.0%
! GAAAATTAAGAAATAGTACC+CGG - chr4_3:10278481-10278500 None:intergenic 25.0%
!!! CAAATTAGACCTTTTTTTAG+AGG + chr4_3:10278826-10278845 Msa0629430:intron 25.0%
!!! TAACTTGTTGTATTAATGAG+TGG + chr4_3:10278969-10278988 Msa0629430:intron 25.0%
! GTGGCATTAAAAGAAAAATT+AGG + chr4_3:10279030-10279049 Msa0629430:intron 25.0%
!!! AGAACGCTGATTATTTTTTT+TGG + chr4_3:10279231-10279250 Msa0629430:intron 25.0%
!!! GAACGCTGATTATTTTTTTT+GGG + chr4_3:10279232-10279251 Msa0629430:intron 25.0%
!!! AACGCTGATTATTTTTTTTG+GGG + chr4_3:10279233-10279252 Msa0629430:intron 25.0%
!! GTTTCAAATGGTTAATTTTG+AGG - chr4_3:10279354-10279373 None:intergenic 25.0%
!!! TTTTTGGCTATCAAATAACA+TGG + chr4_3:10279382-10279401 Msa0629430:intron 25.0%
!!! TTTTGGCTATCAAATAACAT+GGG + chr4_3:10279383-10279402 Msa0629430:intron 25.0%
! GTGAACAAAAAGAAAAGTAA+GGG - chr4_3:10279443-10279462 None:intergenic 25.0%
! TGTGAACAAAAAGAAAAGTA+AGG - chr4_3:10279444-10279463 None:intergenic 25.0%
! TAAAAAAGATACAACAACTC+AGG - chr4_3:10279472-10279491 None:intergenic 25.0%
!!! TGAGTTGTTGTATCTTTTTT+AGG + chr4_3:10279471-10279490 Msa0629430:intron 25.0%
! CTACTTGTATCATATGATTT+AGG - chr4_3:10279604-10279623 None:intergenic 25.0%
! CTAAATCATATGATACAAGT+AGG + chr4_3:10279602-10279621 Msa0629430:three_prime_UTR 25.0%
!! ATATAGGTTGAAATAGAGAT+AGG - chr4_3:10279725-10279744 None:intergenic 25.0%
! ATTTCAACCTATATTTGAAG+TGG + chr4_3:10279731-10279750 Msa0629430:intron 25.0%
! ATATTGATGAAAACCAATGA+TGG + chr4_3:10279763-10279782 Msa0629430:intron 25.0%
! TATTGATGAAAACCAATGAT+GGG + chr4_3:10279764-10279783 Msa0629430:intron 25.0%
!!! TTTTTTACTGATTGGATCAT+AGG - chr4_3:10280026-10280045 None:intergenic 25.0%
!!! ATCCAAAAATCTTGATTTGT+GGG + chr4_3:10280125-10280144 Msa0629430:intron 25.0%
!!! CTTTAAGATTATGTGACATT+CGG + chr4_3:10280233-10280252 Msa0629430:intron 25.0%
!! TTTAAGATTATGTGACATTC+GGG + chr4_3:10280234-10280253 Msa0629430:intron 25.0%
! ATATCTTATGTTCTTTGTAG+TGG - chr4_3:10280406-10280425 None:intergenic 25.0%
! GGTTCAATTAAAAAATTTGG+TGG - chr4_3:10280454-10280473 None:intergenic 25.0%
! ATAACTGATAAAGCACATTT+AGG + chr4_3:10280575-10280594 Msa0629430:intron 25.0%
! AATTATTAGCTATCAGCTAT+CGG - chr4_3:10280665-10280684 None:intergenic 25.0%
! ATGAGAGATACATTATTGAA+TGG - chr4_3:10281481-10281500 None:intergenic 25.0%
!! CTTCACAAAATAACTTTTTG+CGG + chr4_3:10281514-10281533 Msa0629430:intron 25.0%
!! TTCACAAAATAACTTTTTGC+GGG + chr4_3:10281515-10281534 Msa0629430:intron 25.0%
! AGAAAAATAATATGCTAGTG+GGG + chr4_3:10281590-10281609 Msa0629430:intron 25.0%
! GAGAGATTAATCATAGTTTA+TGG + chr4_3:10281833-10281852 Msa0629430:intron 25.0%
! ATTCTTCATGAAAATCATAG+AGG - chr4_3:10282338-10282357 None:intergenic 25.0%
!! TTTTTCTCTATTCAAGTATG+TGG + chr4_3:10282464-10282483 Msa0629430:intron 25.0%
! AAATAGCAAGTTAACTGATT+TGG + chr4_3:10283098-10283117 Msa0629430:intron 25.0%
!! CACAATTTTATAGACATGTT+AGG + chr4_3:10283155-10283174 Msa0629430:intron 25.0%
! AATTACTATTGTTGTACATG+TGG + chr4_3:10283544-10283563 Msa0629430:intron 25.0%
! ATTACTATTGTTGTACATGT+GGG + chr4_3:10283545-10283564 Msa0629430:intron 25.0%
! CAAGTATCAAAATTGCAATT+GGG - chr4_3:10283932-10283951 None:intergenic 25.0%
! ACAAGTATCAAAATTGCAAT+TGG - chr4_3:10283933-10283952 None:intergenic 25.0%
!!! TCTTTTTTTAAATCTGTCAC+TGG - chr4_3:10284099-10284118 None:intergenic 25.0%
! AGTGACAGATTTAAAAAAAG+AGG + chr4_3:10284098-10284117 Msa0629430:three_prime_UTR 25.0%
! GTGACAGATTTAAAAAAAGA+GGG + chr4_3:10284099-10284118 Msa0629430:three_prime_UTR 25.0%
!!! ATGAGTTGGTGAATAAAATA+TGG - chr4_3:10284152-10284171 None:intergenic 25.0%
! AAGTTGTAAAAATCATGAGT+TGG - chr4_3:10284166-10284185 None:intergenic 25.0%
! ATTTCTTGTTCTTACATTTG+AGG + chr4_3:10284206-10284225 Msa0629430:intron 25.0%
!! TGATTTACAGATGAATTTTC+AGG - chr4_3:10284279-10284298 None:intergenic 25.0%
!!! TTTCATTAGGCTTTTTAAGA+AGG - chr4_3:10284420-10284439 None:intergenic 25.0%
!!! TTACCAAGGTTTTTTTCATT+AGG - chr4_3:10284433-10284452 None:intergenic 25.0%
! TACAATGCATCAATATAATC+GGG - chr4_3:10284801-10284820 None:intergenic 25.0%
! GTACAATGCATCAATATAAT+CGG - chr4_3:10284802-10284821 None:intergenic 25.0%
! GTTTATATGATTCTCTTGAT+TGG + chr4_3:10285060-10285079 Msa0629430:intron 25.0%
! AAAGCCATTTAGTAATCTAA+GGG + chr4_3:10285102-10285121 Msa0629430:intron 25.0%
! NNAAATATTCTCAGTTTGAG+TGG - chr4_3:10285133-10285152 None:intergenic 25.0%
!! TAGGTATTATAATTTGGGTT+GGG + chr4_3:10285326-10285345 Msa0629430:intron 25.0%
! TTGAAATAGTAGGAAACAAA+AGG + chr4_3:10285443-10285462 Msa0629430:intron 25.0%
!! AAATGCTTTTAATACTACAC+TGG + chr4_3:10285495-10285514 Msa0629430:intron 25.0%
!!! TTTAATACTACACTGGTTTA+AGG + chr4_3:10285502-10285521 Msa0629430:intron 25.0%
! AAATAGAGCTTATAAAGCTT+AGG + chr4_3:10285562-10285581 Msa0629430:intron 25.0%
! ATAAAATAACGTTTGATTGG+AGG - chr4_3:10285918-10285937 None:intergenic 25.0%
!! ATATAGATGTTTGGTTTCTT+TGG + chr4_3:10285943-10285962 Msa0629430:intron 25.0%
!! TTTTGATGCAAAATTACTCT+TGG + chr4_3:10286070-10286089 Msa0629430:intron 25.0%
! TACATATCAAAGTGATAGTA+AGG - chr4_3:10286267-10286286 None:intergenic 25.0%
!! AATTTTCTTGCCTTGATTTT+TGG - chr4_3:10286346-10286365 None:intergenic 25.0%
!! TTTTAATATGAAACTCGCTT+TGG - chr4_3:10286372-10286391 None:intergenic 25.0%
! ATTTAATCATCTATCAATGG+AGG + chr4_3:10286464-10286483 Msa0629430:intron 25.0%
! TGTTATCAAACACTTAGATT+GGG + chr4_3:10286691-10286710 Msa0629430:three_prime_UTR 25.0%
! AATGATAAAACCAAGTAATC+AGG - chr4_3:10287054-10287073 None:intergenic 25.0%
!! CAGCCAAATTTATCTAAAAT+TGG - chr4_3:10287107-10287126 None:intergenic 25.0%
! AAAGATCAATGGTTATGATT+AGG - chr4_3:10287191-10287210 None:intergenic 25.0%
! TAAGAATTGAATAAAGACAC+CGG - chr4_3:10287375-10287394 None:intergenic 25.0%
!! ATTTTTATTCTAACCGATAG+AGG - chr4_3:10287493-10287512 None:intergenic 25.0%
! TGTTGAGATAATGATAATCA+TGG + chr4_3:10287546-10287565 Msa0629430:intron 25.0%
! AGTATAAAAGGTTCACATTA+AGG + chr4_3:10287639-10287658 Msa0629430:intron 25.0%
! TAAAATCAAAGGTCAAGATT+TGG + chr4_3:10287696-10287715 Msa0629430:intron 25.0%
!!! TTTTTTCATGTTGAGTTGTA+AGG + chr4_3:10287838-10287857 Msa0629430:intron 25.0%
! GGTAAATCATAAAAATGAGA+GGG - chr4_3:10288128-10288147 None:intergenic 25.0%
! AGGTAAATCATAAAAATGAG+AGG - chr4_3:10288129-10288148 None:intergenic 25.0%
! TGTTAGCATAGTTAGTATTA+TGG + chr4_3:10288393-10288412 Msa0629430:intron 25.0%
! GATAAAACATTACGCAAAAA+AGG - chr4_3:10288584-10288603 None:intergenic 25.0%
! ATATATCGGGTTACAATTTA+AGG - chr4_3:10288683-10288702 None:intergenic 25.0%
! TTGAACAAGAAGAGATATAT+CGG - chr4_3:10288697-10288716 None:intergenic 25.0%
! AATCTAATCATTCGAAGATA+TGG - chr4_3:10288904-10288923 None:intergenic 25.0%
! CAAGTAAATTTACAAGAGAA+GGG - chr4_3:10289140-10289159 None:intergenic 25.0%
! ACAAGTAAATTTACAAGAGA+AGG - chr4_3:10289141-10289160 None:intergenic 25.0%
! AACGTTATTATTATGCAACA+TGG + chr4_3:10289273-10289292 Msa0629430:three_prime_UTR 25.0%
! TTATTATTATGCAACATGGA+AGG + chr4_3:10289277-10289296 Msa0629430:three_prime_UTR 25.0%
! ATGATGTTAATAACAATGGA+TGG + chr4_3:10289317-10289336 Msa0629430:three_prime_UTR 25.0%
! TGATGTTAATAACAATGGAT+GGG + chr4_3:10289318-10289337 Msa0629430:three_prime_UTR 25.0%
!!! ACAGAAATTTTAATTGTCGA+AGG + chr4_3:10289354-10289373 Msa0629430:three_prime_UTR 25.0%
!!! CAGAAATTTTAATTGTCGAA+GGG + chr4_3:10289355-10289374 Msa0629430:three_prime_UTR 25.0%
! AAAGTCATTATGGATGATAA+TGG - chr4_3:10289511-10289530 None:intergenic 25.0%
!! ACAATGTTGAAACAGTATTT+TGG - chr4_3:10289645-10289664 None:intergenic 25.0%
!!! AGATCTTGAAATTTTAAGGT+TGG - chr4_3:10289788-10289807 None:intergenic 25.0%
! AACCTTAAAATTTCAAGATC+TGG + chr4_3:10289787-10289806 Msa0629430:intron 25.0%
! AAATGAACTAGAAAATGCTT+TGG - chr4_3:10289910-10289929 None:intergenic 25.0%
! TATAGCCTCATAATTTCTAA+GGG - chr4_3:10290170-10290189 None:intergenic 25.0%
!!! AACAATTTTTAAAACAGTGG+TGG - chr4_3:10290307-10290326 None:intergenic 25.0%
!!! AGATAAAGCTTTTATCGATT+AGG - chr4_3:10290372-10290391 None:intergenic 25.0%
! AGAAAATAAATTGTCTCTCT+AGG - chr4_3:10290646-10290665 None:intergenic 25.0%
! TTGCCATAAGATCATATATA+AGG - chr4_3:10290822-10290841 None:intergenic 25.0%
! TTATTGTGCAAAATAATGCT+GGG + chr4_3:10290879-10290898 Msa0629430:intron 25.0%
!!! TTTATGCTTTTCTTGTTTCT+TGG + chr4_3:10291076-10291095 Msa0629430:intron 25.0%
!! TGTGTATGATTATTGGTTAA+TGG + chr4_3:10291103-10291122 Msa0629430:intron 25.0%
!! TTGGTTAATGGCTTAAATTT+TGG + chr4_3:10291115-10291134 Msa0629430:intron 25.0%
! AACAAATGTTAACAAGGATT+TGG - chr4_3:10291590-10291609 None:intergenic 25.0%
! GAAAAGAACAAATGTTAACA+AGG - chr4_3:10291596-10291615 None:intergenic 25.0%
! TTGGAATTTCTGATATTACA+TGG + chr4_3:10291785-10291804 Msa0629430:intron 25.0%
! AATTGCTTGAATTTATAACC+TGG + chr4_3:10292062-10292081 Msa0629430:intron 25.0%
!! AAGAAAAGGTATAATTCTCT+AGG + chr4_3:10292224-10292243 Msa0629430:intron 25.0%
!!! TCTCCAAGTTTTTTTTTTAC+GGG - chr4_3:10292358-10292377 None:intergenic 25.0%
! AAGAATCTTTAAATTACGAG+GGG - chr4_3:10294137-10294156 None:intergenic 25.0%
! CAAAGAATCTTTAAATTACG+AGG - chr4_3:10294135-10294154 None:intergenic 25.0%
! CTCGTAATTTAAAGATTCTT+TGG + chr4_3:10292384-10292403 Msa0629430:intron 25.0%
! TGATTGTGCATTAATTAATG+AGG + chr4_3:10292467-10292486 Msa0629430:intron 25.0%
! ATTGAGCAGGAAAAAAAATT+GGG - chr4_3:10292716-10292735 None:intergenic 25.0%
! GATCAACAAAAACATAAGAA+GGG - chr4_3:10292803-10292822 None:intergenic 25.0%
! AGATCAACAAAAACATAAGA+AGG - chr4_3:10292804-10292823 None:intergenic 25.0%
!!! TAAAATGGGTTTTCGAATTT+GGG + chr4_3:10292823-10292842 Msa0629430:intron 25.0%
! AGAAGAGAAAGAAAAAGAAT+TGG + chr4_3:10292999-10293018 Msa0629430:intron 25.0%
! GAAGAGAAAGAAAAAGAATT+GGG + chr4_3:10293000-10293019 Msa0629430:intron 25.0%
!! GAGAAATTTCGAATCTTTTA+GGG - chr4_3:10293103-10293122 None:intergenic 25.0%
!! GCACATTTTCAATTTTCTAA+CGG + chr4_3:10293234-10293253 Msa0629430:intron 25.0%
!! CACATTTTCAATTTTCTAAC+GGG + chr4_3:10293235-10293254 Msa0629430:intron 25.0%
! CCAAAACATATTCATGAAAT+TGG - chr4_3:10293546-10293565 None:intergenic 25.0%
!! CCAATTTCATGAATATGTTT+TGG + chr4_3:10293543-10293562 Msa0629430:intron 25.0%
!!! ATATGTTTTGGATTTGTTGT+TGG + chr4_3:10293555-10293574 Msa0629430:intron 25.0%
! CGAAATGGAATAAACAAAAA+TGG + chr4_3:10293981-10294000 Msa0629430:intron 25.0%
!! ACTGGATAAATTTGCATTTT+TGG - chr4_3:10294061-10294080 None:intergenic 25.0%
! CTCGTAATTTAAAGATTCTT+TGG - chr4_3:10292384-10292403 None:intergenic 25.0%
! CAAAGAATCTTTAAATTACG+AGG + chr4_3:10294135-10294154 Msa0629430:intron 25.0%
! AAGAATCTTTAAATTACGAG+GGG + chr4_3:10294137-10294156 Msa0629430:intron 25.0%
!!! CCAAGTTTTTTTTTTTTACC+GGG + chr4_3:10294166-10294185 Msa0629430:intron 25.0%
!!! CAAGTTTTTTTTTTTTACCG+GGG + chr4_3:10294167-10294186 Msa0629430:intron 25.0%
!!! AAGTTTTTTTTTTTTACCGG+GGG + chr4_3:10294168-10294187 Msa0629430:intron 25.0%
! ATAAAACAAACTATGAACTG+TGG - chr4_3:10294596-10294615 None:intergenic 25.0%
! CTGTAAGTATTAAACTCATT+TGG - chr4_3:10294771-10294790 None:intergenic 25.0%
! TGAGTTTAATACTTACAGAA+AGG + chr4_3:10294773-10294792 Msa0629430:three_prime_UTR 25.0%
! TAAAAATTGGGAGTTAGTAT+TGG - chr4_3:10294800-10294819 None:intergenic 25.0%
! TTTATCTCTAAATCTGTACT+TGG + chr4_3:10294826-10294845 Msa0629430:intron 25.0%
! AATGCCTTAAATTATTTCAC+TGG + chr4_3:10295048-10295067 Msa0629430:three_prime_UTR 25.0%
! ACATAAACATATGTAACCAT+TGG + chr4_3:10295113-10295132 Msa0629430:three_prime_UTR 25.0%
! ATTGGATTTGGCTATATATT+TGG + chr4_3:10295154-10295173 Msa0629430:three_prime_UTR 25.0%
! TTTAGTTGTCTAGATCAATA+GGG + chr4_3:10295266-10295285 Msa0629430:three_prime_UTR 25.0%
! GAAAATTCTAACCAATGTAA+TGG - chr4_3:10295388-10295407 None:intergenic 25.0%
!!! TTGTTTTGGTATTTAACGGT+TGG + chr4_3:10278083-10278102 Msa0629430:intron 30.0%
! TGTTGATGAAAAGTCTTATC+TGG + chr4_3:10278175-10278194 Msa0629430:intron 30.0%
! GAACTTGTTTGAACTTTGAA+TGG + chr4_3:10278236-10278255 Msa0629430:intron 30.0%
! GTTGATGAATTAGTAGTTGT+TGG + chr4_3:10278276-10278295 Msa0629430:CDS 30.0%
AAAATATCTTCATCTTCCTC+CGG - chr4_3:10278383-10278402 None:intergenic 30.0%
!!! TTTCTCTTTTTTACCCCTTT+TGG + chr4_3:10278497-10278516 Msa0629430:intron 30.0%
TTTAGTGTAATCACATGTGT+TGG + chr4_3:10278633-10278652 Msa0629430:intron 30.0%
ATTTCTTCTATCACAAGTGT+AGG + chr4_3:10278683-10278702 Msa0629430:intron 30.0%
!! TTAGTTTGTACTAGTAAGTG+TGG + chr4_3:10278773-10278792 Msa0629430:intron 30.0%
! TAGTTTGTACTAGTAAGTGT+GGG + chr4_3:10278774-10278793 Msa0629430:intron 30.0%
GTTCACATATCATGATATAC+AGG + chr4_3:10278864-10278883 Msa0629430:intron 30.0%
TTGTTGTATTAATGAGTGGA+CGG + chr4_3:10278973-10278992 Msa0629430:intron 30.0%
ACATGGGTTTCTAAGTAATT+AGG + chr4_3:10279399-10279418 Msa0629430:intron 30.0%
CATGGGTTTCTAAGTAATTA+GGG + chr4_3:10279400-10279419 Msa0629430:intron 30.0%
TATAGTTGTTGATCATATCG+AGG - chr4_3:10279568-10279587 None:intergenic 30.0%
CATAATTTATTGCCCATCAT+TGG - chr4_3:10279779-10279798 None:intergenic 30.0%
!! AAAGTAAAGAGCATTGTTGA+AGG + chr4_3:10279801-10279820 Msa0629430:intron 30.0%
!! AAGTAAAGAGCATTGTTGAA+GGG + chr4_3:10279802-10279821 Msa0629430:intron 30.0%
CATGTAATACATCTTTAGTC+AGG + chr4_3:10279892-10279911 Msa0629430:intron 30.0%
AAAATAACAGGGTAGTTAGA+AGG - chr4_3:10279941-10279960 None:intergenic 30.0%
AGGTTTAAGGGAAAATAACA+GGG - chr4_3:10279952-10279971 None:intergenic 30.0%
TAGGTTTAAGGGAAAATAAC+AGG - chr4_3:10279953-10279972 None:intergenic 30.0%
!!! TGTTATTTTCCCTTAAACCT+AGG + chr4_3:10279952-10279971 Msa0629430:intron 30.0%
!!! ATCGCTCATTTTTTACTGAT+TGG - chr4_3:10280034-10280053 None:intergenic 30.0%
! GATCCAAAAATCTTGATTTG+TGG + chr4_3:10280124-10280143 Msa0629430:intron 30.0%
!! TCCAAAAATCTTGATTTGTG+GGG + chr4_3:10280126-10280145 Msa0629430:intron 30.0%
ATGTCACATAATCTTAAAGC+CGG - chr4_3:10280232-10280251 None:intergenic 30.0%
GATATAGATGCCAATGTTAA+AGG + chr4_3:10280421-10280440 Msa0629430:intron 30.0%
TGAATAGCTTATAAGCTTGT+TGG - chr4_3:10281294-10281313 None:intergenic 30.0%
! TCACAAAATAACTTTTTGCG+GGG + chr4_3:10281516-10281535 Msa0629430:intron 30.0%
!! GGTCAACACTTCATTTTTAA+TGG + chr4_3:10281537-10281556 Msa0629430:intron 30.0%
GAAAAATAATATGCTAGTGG+GGG + chr4_3:10281591-10281610 Msa0629430:intron 30.0%
TAGTTGAATCGTGCAAAAAA+TGG + chr4_3:10282098-10282117 Msa0629430:intron 30.0%
GAAATGGTAATCATCTTCAA+TGG - chr4_3:10282162-10282181 None:intergenic 30.0%
! ATTTCCATGGTTAGTCAAAT+TGG + chr4_3:10282210-10282229 Msa0629430:intron 30.0%
ACAACATTCATTTCAGAAGA+GGG + chr4_3:10282260-10282279 Msa0629430:intron 30.0%
TAAACTCGACAATCTGTATA+TGG - chr4_3:10282378-10282397 None:intergenic 30.0%
!!! GTATCAGTTTTAAACTCTGA+AGG + chr4_3:10282415-10282434 Msa0629430:intron 30.0%
!!! AGTTTTAAACTCTGAAGGAT+GGG + chr4_3:10282420-10282439 Msa0629430:intron 30.0%
TTTGAAGAACGACAAGATTA+TGG + chr4_3:10282505-10282524 Msa0629430:intron 30.0%
ACATGCTGTTATATTGAAGA+AGG - chr4_3:10282579-10282598 None:intergenic 30.0%
ACCAATGACAATTCCAAAAA+GGG - chr4_3:10282726-10282745 None:intergenic 30.0%
AACCAATGACAATTCCAAAA+AGG - chr4_3:10282727-10282746 None:intergenic 30.0%
TTTGAATGGTATAGCAGAAT+TGG + chr4_3:10282745-10282764 Msa0629430:intron 30.0%
ATTTAGTGCCTTAATATGTC+AGG - chr4_3:10283082-10283101 None:intergenic 30.0%
TTACTATTGTTGTACATGTG+GGG + chr4_3:10283546-10283565 Msa0629430:intron 30.0%
! TTTATTCTTTTCAAACAGGG+TGG + chr4_3:10283587-10283606 Msa0629430:intron 30.0%
! TTAAATGAGTATCTTTTGCC+AGG - chr4_3:10283700-10283719 None:intergenic 30.0%
! ATACATCAACAGAGAGTTTT+AGG + chr4_3:10283727-10283746 Msa0629430:three_prime_UTR 30.0%
!!! CTTTGTCGTTGATTTTTTCT+TGG + chr4_3:10283821-10283840 Msa0629430:intron 30.0%
! TTTTTGTTCAGATTCAATGC+AGG + chr4_3:10284238-10284257 Msa0629430:intron 30.0%
! TTTTGTTCAGATTCAATGCA+GGG + chr4_3:10284239-10284258 Msa0629430:intron 30.0%
TGCATAGGAAGATTTAATTG+AGG + chr4_3:10284385-10284404 Msa0629430:intron 30.0%
AGGAAGATTTAATTGAGGAT+AGG + chr4_3:10284390-10284409 Msa0629430:intron 30.0%
AAGCCTAATGAAAAAAACCT+TGG + chr4_3:10284427-10284446 Msa0629430:intron 30.0%
! TATACTTCTTTGACTGCTTT+TGG - chr4_3:10284534-10284553 None:intergenic 30.0%
ATACTTGTTCATTGTACACA+TGG + chr4_3:10284553-10284572 Msa0629430:three_prime_UTR 30.0%
TACTTGTTCATTGTACACAT+GGG + chr4_3:10284554-10284573 Msa0629430:three_prime_UTR 30.0%
!!! AATACTTTTTCCCAACTTGT+AGG + chr4_3:10284731-10284750 Msa0629430:intron 30.0%
TGCATCGGAAAAAATCTTAA+TGG - chr4_3:10284757-10284776 None:intergenic 30.0%
GAAAGCCATTTAGTAATCTA+AGG + chr4_3:10285101-10285120 Msa0629430:intron 30.0%
GTAGGTATTATAATTTGGGT+TGG + chr4_3:10285325-10285344 Msa0629430:intron 30.0%
! AAACATTTTCTCATCCAATG+TGG + chr4_3:10285415-10285434 Msa0629430:intron 30.0%
! AACATTTTCTCATCCAATGT+GGG + chr4_3:10285416-10285435 Msa0629430:intron 30.0%
AAATTCTCACTTCACAAGTT+GGG + chr4_3:10285585-10285604 Msa0629430:intron 30.0%
! TTCACAAGTTGGGTTATATT+GGG + chr4_3:10285595-10285614 Msa0629430:intron 30.0%
ATAATACAATGGTCCATCAA+CGG - chr4_3:10285668-10285687 None:intergenic 30.0%
TTCATTCGAGGATAATACAA+TGG - chr4_3:10285679-10285698 None:intergenic 30.0%
ATTGTATTATCCTCGAATGA+AGG + chr4_3:10285678-10285697 Msa0629430:intron 30.0%
TTGTATTATCCTCGAATGAA+GGG + chr4_3:10285679-10285698 Msa0629430:intron 30.0%
TAACATAAAACAAACTGGAC+AGG - chr4_3:10285732-10285751 None:intergenic 30.0%
TTTATGTTAACTAACTACGC+TGG + chr4_3:10285743-10285762 Msa0629430:intron 30.0%
TGTAACACTTTCATTTGGAA+GGG - chr4_3:10285839-10285858 None:intergenic 30.0%
TACATTAAAACTGACTAAGC+AGG - chr4_3:10286114-10286133 None:intergenic 30.0%
GAGTAAAATGTAGCACATAT+TGG + chr4_3:10286394-10286413 Msa0629430:intron 30.0%
CTGTTATCAAACACTTAGAT+TGG + chr4_3:10286690-10286709 Msa0629430:three_prime_UTR 30.0%
TATTACAACAAAGGAGTTGA+TGG + chr4_3:10286841-10286860 Msa0629430:intron 30.0%
AATGTGACAAACAAAAGGAT+CGG - chr4_3:10286901-10286920 None:intergenic 30.0%
AGTGTAATGTGACAAACAAA+AGG - chr4_3:10286906-10286925 None:intergenic 30.0%
TAAGTCTTTAGACTTACTCT+TGG - chr4_3:10287721-10287740 None:intergenic 30.0%
TACTATTAATCCATAGGGTT+TGG + chr4_3:10287236-10287255 Msa0629430:intron 30.0%
AGACACCGGATATTAATTAA+AGG - chr4_3:10287361-10287380 None:intergenic 30.0%
TTAACATCACAATCCTCTAT+CGG + chr4_3:10287477-10287496 Msa0629430:intron 30.0%
TGAGATAATGATAATCATGG+TGG + chr4_3:10287549-10287568 Msa0629430:intron 30.0%
!! TGTTTGTTTGAGATCTCTTT+TGG + chr4_3:10287579-10287598 Msa0629430:intron 30.0%
! TTTAGGAGAAGGAGTATAAA+AGG + chr4_3:10287627-10287646 Msa0629430:intron 30.0%
TAAGTCTTTAGACTTACTCT+TGG + chr4_3:10287721-10287740 Msa0629430:intron 30.0%
! GCACATTTTACTATGTGATT+TGG + chr4_3:10287875-10287894 Msa0629430:intron 30.0%
AAAAATGAGAGGGAAATGAA+AGG - chr4_3:10288118-10288137 None:intergenic 30.0%
!!! TGTGTGTGTGTTTTTTTGAA+TGG + chr4_3:10288366-10288385 Msa0629430:intron 30.0%
TAGCATAGTTAGTATTATGG+TGG + chr4_3:10288396-10288415 Msa0629430:intron 30.0%
AGCATAGTTAGTATTATGGT+GGG + chr4_3:10288397-10288416 Msa0629430:intron 30.0%
AATAACACAATGGAAAGATC+AGG - chr4_3:10288487-10288506 None:intergenic 30.0%
ATGGTGTAACAATAACACAA+TGG - chr4_3:10288497-10288516 None:intergenic 30.0%
TTGTGCATTGTATTTCGTAT+TGG + chr4_3:10288528-10288547 Msa0629430:intron 30.0%
TGTGCATTGTATTTCGTATT+GGG + chr4_3:10288529-10288548 Msa0629430:intron 30.0%
! CTATAGATTCTCAGTTTTAC+CGG + chr4_3:10288636-10288655 Msa0629430:intron 30.0%
!! TAATTGTGAAAAGTATCCTC+CGG - chr4_3:10288658-10288677 None:intergenic 30.0%
TGAACAAGAAGAGATATATC+GGG - chr4_3:10288696-10288715 None:intergenic 30.0%
CTTCTTGTTCAAAGATTTCA+TGG + chr4_3:10288705-10288724 Msa0629430:intron 30.0%
GTTATATGCACTACTAGATA+GGG - chr4_3:10288749-10288768 None:intergenic 30.0%
TGTTATATGCACTACTAGAT+AGG - chr4_3:10288750-10288769 None:intergenic 30.0%
TCTAGTAGTGCATATAACAA+AGG + chr4_3:10288751-10288770 Msa0629430:intron 30.0%
CTAGTAGTGCATATAACAAA+GGG + chr4_3:10288752-10288771 Msa0629430:intron 30.0%
AATAATCTGTCATTACAGAG+AGG - chr4_3:10288799-10288818 None:intergenic 30.0%
CTGTAATGACAGATTATTCA+AGG + chr4_3:10288801-10288820 Msa0629430:intron 30.0%
TTGCAACTACAAAGAATGTA+AGG - chr4_3:10288861-10288880 None:intergenic 30.0%
!!! CTGTTTCAACATTGTTTTAG+TGG + chr4_3:10289650-10289669 Msa0629430:intron 30.0%
GCTTTGGTTGAAATGATTTA+AGG - chr4_3:10289894-10289913 None:intergenic 30.0%
TGTTGAAAAGCAAGTGAAAA+AGG - chr4_3:10289940-10289959 None:intergenic 30.0%
ACTTTATACAGAACAGAATC+AGG - chr4_3:10290107-10290126 None:intergenic 30.0%
!! TAAAGTTCTCTAGCTTCTTT+TGG + chr4_3:10290121-10290140 Msa0629430:intron 30.0%
! TAATTTCTAAGGGAATAGGT+TGG - chr4_3:10290160-10290179 None:intergenic 30.0%
! CTCATAATTTCTAAGGGAAT+AGG - chr4_3:10290164-10290183 None:intergenic 30.0%
CTATTCCCTTAGAAATTATG+AGG + chr4_3:10290162-10290181 Msa0629430:intron 30.0%
CTATAGCCTCATAATTTCTA+AGG - chr4_3:10290171-10290190 None:intergenic 30.0%
ACTAAAGAACATGCAATAGT+TGG + chr4_3:10290196-10290215 Msa0629430:intron 30.0%
!!! ATTTTTAAAACAGTGGTGGT+TGG - chr4_3:10290303-10290322 None:intergenic 30.0%
ACAAATATAGCCACTTCTAA+GGG - chr4_3:10290421-10290440 None:intergenic 30.0%
TACAAATATAGCCACTTCTA+AGG - chr4_3:10290422-10290441 None:intergenic 30.0%
TATAAGACCACTATTCTAGT+GGG - chr4_3:10290470-10290489 None:intergenic 30.0%
ATATAAGACCACTATTCTAG+TGG - chr4_3:10290471-10290490 None:intergenic 30.0%
ATGAGTGATGTAAATTAGCT+TGG + chr4_3:10290535-10290554 Msa0629430:intron 30.0%
! TGAGTGATGTAAATTAGCTT+GGG + chr4_3:10290536-10290555 Msa0629430:intron 30.0%
! ATGTAAATTAGCTTGGGATA+AGG + chr4_3:10290542-10290561 Msa0629430:intron 30.0%
!!! ATATTTTGGTTCTAAGGGTT+TGG + chr4_3:10290711-10290730 Msa0629430:intron 30.0%
!!! TATTTTGGTTCTAAGGGTTT+GGG + chr4_3:10290712-10290731 Msa0629430:intron 30.0%
ATGTTTCAGTAATAGAGGTT+CGG + chr4_3:10290848-10290867 Msa0629430:intron 30.0%
GTTATTGTGCAAAATAATGC+TGG + chr4_3:10290878-10290897 Msa0629430:intron 30.0%
TAGAGCAGATAAAAACAACT+CGG - chr4_3:10291051-10291070 None:intergenic 30.0%
ATCTTCCATCTTTCATAGAA+GGG - chr4_3:10291149-10291168 None:intergenic 30.0%
TAAGCCATAAGAGAAAAATG+AGG - chr4_3:10291310-10291329 None:intergenic 30.0%
!!! GAAATGTTTTTTAGGTAAGG+AGG + chr4_3:10291344-10291363 Msa0629430:intron 30.0%
CATTAAAAAACTCTCACATG+AGG + chr4_3:10291414-10291433 Msa0629430:three_prime_UTR 30.0%
AGAATGAGAATAAATCTGTG+TGG + chr4_3:10291505-10291524 Msa0629430:intron 30.0%
AACAAGGATTTGGAAGTAAA+AGG - chr4_3:10291580-10291599 None:intergenic 30.0%
! TTGTTCTTTTCCTTCTGTTT+TGG + chr4_3:10291605-10291624 Msa0629430:intron 30.0%
TTCATTGAATCCAAAACAGA+AGG - chr4_3:10291618-10291637 None:intergenic 30.0%
TCCTGATTATATTACTTACC+AGG + chr4_3:10291644-10291663 Msa0629430:intron 30.0%
CCTGATTATATTACTTACCA+GGG + chr4_3:10291645-10291664 Msa0629430:intron 30.0%
ATTATATTACTTACCAGGGT+TGG + chr4_3:10291649-10291668 Msa0629430:intron 30.0%
TTATATTACTTACCAGGGTT+GGG + chr4_3:10291650-10291669 Msa0629430:intron 30.0%
! TATCATCACCTTCTTTTGTA+TGG + chr4_3:10291758-10291777 Msa0629430:intron 30.0%
!!! TAATTTTTAGCTGCTTCCAT+CGG + chr4_3:10291836-10291855 Msa0629430:intron 30.0%
!!! AGCTACTTTTTGTGTATGAA+CGG + chr4_3:10291878-10291897 Msa0629430:three_prime_UTR 30.0%
ATAGGAAATTTAGACAGTCA+TGG + chr4_3:10292011-10292030 Msa0629430:intron 30.0%
!!! TCCAAGTTTTTTTTTTACGG+GGG - chr4_3:10292356-10292375 None:intergenic 30.0%
!!! CTCCAAGTTTTTTTTTTACG+GGG - chr4_3:10292357-10292376 None:intergenic 30.0%
AGAATCTTTAAATTACGAGG+GGG - chr4_3:10294138-10294157 None:intergenic 30.0%
TTGTGCATTAATTAATGAGG+TGG + chr4_3:10292470-10292489 Msa0629430:intron 30.0%
GATTGAGCAGGAAAAAAAAT+TGG - chr4_3:10292717-10292736 None:intergenic 30.0%
TGAATTACTGGGTTTCAAAT+TGG + chr4_3:10292775-10292794 Msa0629430:intron 30.0%
!! CTAAAATGGGTTTTCGAATT+TGG + chr4_3:10292822-10292841 Msa0629430:intron 30.0%
!! AAAATGGGTTTTCGAATTTG+GGG + chr4_3:10292824-10292843 Msa0629430:intron 30.0%
! CGAGAAATTTCGAATCTTTT+AGG - chr4_3:10293104-10293123 None:intergenic 30.0%
AAAGATTCGAAATTTCTCGT+AGG + chr4_3:10293105-10293124 Msa0629430:intron 30.0%
! AATTTTCATTCTCTGCATCA+TGG + chr4_3:10293331-10293350 Msa0629430:intron 30.0%
! AGTTTGTTTGTTTCAGCATT+GGG + chr4_3:10293387-10293406 Msa0629430:intron 30.0%
TACATAGGCAATTGTTACAA+GGG - chr4_3:10293474-10293493 None:intergenic 30.0%
TCTTCTAATCAACAACAACT+CGG - chr4_3:10293730-10293749 None:intergenic 30.0%
AATGAAGATTTATGCTGTGA+AGG + chr4_3:10293811-10293830 Msa0629430:intron 30.0%
AGTTGTTGTAGAAGAAGAAA+TGG + chr4_3:10293838-10293857 Msa0629430:intron 30.0%
AAGAAATGGATGAAGAAAAG+AGG + chr4_3:10293852-10293871 Msa0629430:intron 30.0%
AGAATCTTTAAATTACGAGG+GGG + chr4_3:10294138-10294157 Msa0629430:intron 30.0%
CCCGGTAAAAAAAAAAAACT+TGG - chr4_3:10294169-10294188 None:intergenic 30.0%
!!! AGTTTTTTTTTTTTACCGGG+GGG + chr4_3:10294169-10294188 Msa0629430:intron 30.0%
GACTTTAATAACTGAGACAT+GGG - chr4_3:10294276-10294295 None:intergenic 30.0%
TGACTTTAATAACTGAGACA+TGG - chr4_3:10294277-10294296 None:intergenic 30.0%
ATCTTTCCGGAATAAAATGA+GGG - chr4_3:10294678-10294697 None:intergenic 30.0%
ATTTATCTGTTCTAATTCGC+AGG - chr4_3:10294743-10294762 None:intergenic 30.0%
TGATTCATTGTGGTTAGATA+GGG + chr4_3:10295019-10295038 Msa0629430:three_prime_UTR 30.0%
CCTTAAATTATTTCACTGGT+GGG + chr4_3:10295052-10295071 Msa0629430:three_prime_UTR 30.0%
CTTCTGGTATTTATTGGATT+TGG + chr4_3:10295142-10295161 Msa0629430:three_prime_UTR 30.0%
CTAATTACATAAGCAACCTT+AGG - chr4_3:10295187-10295206 None:intergenic 30.0%
AGGTTGCTTATGTAATTAGT+TGG + chr4_3:10295188-10295207 Msa0629430:three_prime_UTR 30.0%
CTATTGATCTAGACAACTAA+AGG - chr4_3:10295267-10295286 None:intergenic 30.0%
CTTTAGTTGTCTAGATCAAT+AGG + chr4_3:10295265-10295284 Msa0629430:three_prime_UTR 30.0%
TTTGAACTTTGAATGGTGCA+GGG + chr4_3:10278243-10278262 Msa0629430:intron 35.0%
! ATGCTTGATGATAGTTGCAA+TGG + chr4_3:10278337-10278356 Msa0629430:three_prime_UTR 35.0%
! AATGGATTTGAATGCATCTC+CGG + chr4_3:10278355-10278374 Msa0629430:three_prime_UTR 35.0%
! GGAAGATGAAGATATTTTCG+AGG + chr4_3:10278385-10278404 Msa0629430:three_prime_UTR 35.0%
!! AGATGAAGATATTTTCGAGG+AGG + chr4_3:10278388-10278407 Msa0629430:three_prime_UTR 35.0%
ACATACTGTTGAGCATGTAT+CGG - chr4_3:10278416-10278435 None:intergenic 35.0%
!!! TTTTACCCCTTTTGGTTTCA+TGG + chr4_3:10278505-10278524 Msa0629430:intron 35.0%
TTGTGATAGAAGAAATGTCC+AGG - chr4_3:10278679-10278698 None:intergenic 35.0%
TTGGAATAGGAGTAATGTGA+TGG + chr4_3:10278718-10278737 Msa0629430:intron 35.0%
AATAGGAGTAATGTGATGGT+AGG + chr4_3:10278722-10278741 Msa0629430:intron 35.0%
GGACTTAAGTTAATCTCACA+TGG + chr4_3:10278795-10278814 Msa0629430:intron 35.0%
! CCTTTCACACCTCTAAAAAA+AGG - chr4_3:10278838-10278857 None:intergenic 35.0%
!!! CCTTTTTTTAGAGGTGTGAA+AGG + chr4_3:10278835-10278854 Msa0629430:intron 35.0%
ATGATATACAGGAACCTATG+TGG + chr4_3:10278875-10278894 Msa0629430:intron 35.0%
TATCAAAACAGCTTCCACAT+AGG - chr4_3:10278892-10278911 None:intergenic 35.0%
!!! AAGCTGTTTTGATAGTTGCT+TGG + chr4_3:10278898-10278917 Msa0629430:intron 35.0%
ATATCTCATTTCTCTGCAAG+TGG + chr4_3:10279011-10279030 Msa0629430:intron 35.0%
GATCAAAACCAGTAACTTGA+GGG - chr4_3:10279167-10279186 None:intergenic 35.0%
TGATCAAAACCAGTAACTTG+AGG - chr4_3:10279168-10279187 None:intergenic 35.0%
TCAATCAACACACTAAGCAA+TGG - chr4_3:10279285-10279304 None:intergenic 35.0%
! ATCACAATGCTGATTATCAC+TGG - chr4_3:10279676-10279695 None:intergenic 35.0%
TACATGGTTCCTAGGTTTAA+GGG - chr4_3:10279964-10279983 None:intergenic 35.0%
! CTGATTGGATCATAGGTTTT+GGG - chr4_3:10280019-10280038 None:intergenic 35.0%
! ACTGATTGGATCATAGGTTT+TGG - chr4_3:10280020-10280039 None:intergenic 35.0%
AGCGATGCAATTTGTAAGAT+TGG + chr4_3:10280048-10280067 Msa0629430:intron 35.0%
!! CCAAAAATCTTGATTTGTGG+GGG + chr4_3:10280127-10280146 Msa0629430:intron 35.0%
TAATGTCGCAAAAAACACGT+TGG + chr4_3:10281009-10281028 Msa0629430:intron 35.0%
AATGTCGCAAAAAACACGTT+GGG + chr4_3:10281010-10281029 Msa0629430:intron 35.0%
TTGGATCAAAATGTGGTGTT+TGG - chr4_3:10281275-10281294 None:intergenic 35.0%
!! AAGCTTGTTGGATCAAAATG+TGG - chr4_3:10281282-10281301 None:intergenic 35.0%
! TAGATGTTTAAGGCTGTGTT+TGG - chr4_3:10281346-10281365 None:intergenic 35.0%
AGATCCACATATCTGGTATT+GGG - chr4_3:10281625-10281644 None:intergenic 35.0%
TACACCTCATTATCAGACAA+AGG + chr4_3:10281670-10281689 Msa0629430:intron 35.0%
ACACCTCATTATCAGACAAA+GGG + chr4_3:10281671-10281690 Msa0629430:intron 35.0%
! TTTGGGAAAAGCATAAACCA+TGG - chr4_3:10281934-10281953 None:intergenic 35.0%
GCAATCAATCACAATATCCT+GGG - chr4_3:10282017-10282036 None:intergenic 35.0%
AGCAATCAATCACAATATCC+TGG - chr4_3:10282018-10282037 None:intergenic 35.0%
CTCTTAATGCAAGTCAATCA+GGG - chr4_3:10282072-10282091 None:intergenic 35.0%
TCTCTTAATGCAAGTCAATC+AGG - chr4_3:10282073-10282092 None:intergenic 35.0%
TTGACTAACCATGGAAATTG+CGG - chr4_3:10282208-10282227 None:intergenic 35.0%
GACAACATTCATTTCAGAAG+AGG + chr4_3:10282259-10282278 Msa0629430:intron 35.0%
TGTTTACATTAGGGACATCA+CGG + chr4_3:10282308-10282327 Msa0629430:intron 35.0%
ACAGATTGTCGAGTTTATCA+AGG + chr4_3:10282381-10282400 Msa0629430:intron 35.0%
!!! CAGTTTTAAACTCTGAAGGA+TGG + chr4_3:10282419-10282438 Msa0629430:intron 35.0%
AAGAACGACAAGATTATGGA+TGG + chr4_3:10282509-10282528 Msa0629430:intron 35.0%
TATATTGAAGAAGGATCCAC+AGG - chr4_3:10282570-10282589 None:intergenic 35.0%
ATCAATAGATTGCCAAAGCA+AGG + chr4_3:10282625-10282644 Msa0629430:intron 35.0%
GACAAAGTAATGATAGAGTG+AGG - chr4_3:10282666-10282685 None:intergenic 35.0%
ATCATTACTTTGTCCTCAGA+TGG + chr4_3:10282672-10282691 Msa0629430:intron 35.0%
! TTTTTCTTGTACTCCATCTG+AGG - chr4_3:10282688-10282707 None:intergenic 35.0%
TCAGATGGAGTACAAGAAAA+AGG + chr4_3:10282687-10282706 Msa0629430:intron 35.0%
! CAATTTAATCACCCCCTTTT+TGG + chr4_3:10282710-10282729 Msa0629430:intron 35.0%
CAATGACAATTCCAAAAAGG+GGG - chr4_3:10282724-10282743 None:intergenic 35.0%
CCAATGACAATTCCAAAAAG+GGG - chr4_3:10282725-10282744 None:intergenic 35.0%
!! GGAATTGTCATTGGTTTGAA+TGG + chr4_3:10282731-10282750 Msa0629430:intron 35.0%
TATAGCAGAATTGGAAGACA+TGG + chr4_3:10282754-10282773 Msa0629430:intron 35.0%
ATAGCAGAATTGGAAGACAT+GGG + chr4_3:10282755-10282774 Msa0629430:intron 35.0%
ATGTAGCAAAAGAATGCAAC+AGG + chr4_3:10282783-10282802 Msa0629430:intron 35.0%
TTGGTGAAATTGTACCAGAA+AGG + chr4_3:10282837-10282856 Msa0629430:intron 35.0%
AGTCACAACCTGACATATTA+AGG + chr4_3:10283071-10283090 Msa0629430:intron 35.0%
! TATTTAGGTTTGATCAGCTG+AGG + chr4_3:10283199-10283218 Msa0629430:intron 35.0%
ATACATTTCATAGAACCCCT+GGG - chr4_3:10283261-10283280 None:intergenic 35.0%
TGAAATGTATGACAAAGTCG+TGG + chr4_3:10283271-10283290 Msa0629430:intron 35.0%
ATTCATCATCAAACTCGAGA+TGG - chr4_3:10283323-10283342 None:intergenic 35.0%
TGGTAGTCACTGTTAACAAA+TGG + chr4_3:10283438-10283457 Msa0629430:intron 35.0%
GGTAGTCACTGTTAACAAAT+GGG + chr4_3:10283439-10283458 Msa0629430:intron 35.0%
TTGCTGTATGATACCTTCTA+AGG + chr4_3:10283639-10283658 Msa0629430:three_prime_UTR 35.0%
TCATTGAATGATTCACCAAG+AGG - chr4_3:10283667-10283686 None:intergenic 35.0%
AGCAGAGTAATCAGAATGAA+AGG + chr4_3:10283857-10283876 Msa0629430:intron 35.0%
GCAGAGTAATCAGAATGAAA+GGG + chr4_3:10283858-10283877 Msa0629430:intron 35.0%
CAGAGTAATCAGAATGAAAG+GGG + chr4_3:10283859-10283878 Msa0629430:intron 35.0%
!! TATTCTCTTGATTTGCAGCT+TGG + chr4_3:10284036-10284055 Msa0629430:intron 35.0%
AAGCATCTTAAGGTTTGTAG+TGG + chr4_3:10284126-10284145 Msa0629430:intron 35.0%
TTTGTTCAGATTCAATGCAG+GGG + chr4_3:10284240-10284259 Msa0629430:intron 35.0%
TGTAAATCAGTTCGTCTATG+AGG + chr4_3:10284290-10284309 Msa0629430:three_prime_UTR 35.0%
ACATAGCACGCATTAGATAA+TGG - chr4_3:10284606-10284625 None:intergenic 35.0%
TATGTCAATGTCTGTTACTC+AGG + chr4_3:10284621-10284640 Msa0629430:three_prime_UTR 35.0%
!!! GTTTTGGAGTCACCTTATTA+CGG + chr4_3:10284647-10284666 Msa0629430:intron 35.0%
ATCTTAATGGCCTACAAGTT+GGG - chr4_3:10284744-10284763 None:intergenic 35.0%
AATCTTAATGGCCTACAAGT+TGG - chr4_3:10284745-10284764 None:intergenic 35.0%
TAATCGGGTTTATAGATTCC+TGG - chr4_3:10284786-10284805 None:intergenic 35.0%
TCATGAAAAAAAGCCTGAGA+TGG + chr4_3:10284830-10284849 Msa0629430:three_prime_UTR 35.0%
TCTTCTGAACTTGATCTCAA+TGG + chr4_3:10284885-10284904 Msa0629430:three_prime_UTR 35.0%
ATATCCATACCTGCAAATCA+GGG - chr4_3:10284950-10284969 None:intergenic 35.0%
TATATCCATACCTGCAAATC+AGG - chr4_3:10284951-10284970 None:intergenic 35.0%
CATTCATTCAGCGAGAAAAT+AGG - chr4_3:10285001-10285020 None:intergenic 35.0%
! CTATTTTCTCGCTGAATGAA+TGG + chr4_3:10284999-10285018 Msa0629430:intron 35.0%
TGATTCTCTTGATTGGTACT+AGG + chr4_3:10285067-10285086 Msa0629430:intron 35.0%
TCTAATCATGGCTAGAGATA+TGG + chr4_3:10285536-10285555 Msa0629430:intron 35.0%
GAAATTCTCACTTCACAAGT+TGG + chr4_3:10285584-10285603 Msa0629430:intron 35.0%
! CTTCACAAGTTGGGTTATAT+TGG + chr4_3:10285594-10285613 Msa0629430:intron 35.0%
AGTGTGAAGCTCATATGTTT+GGG + chr4_3:10285706-10285725 Msa0629430:intron 35.0%
!! TGGTGACTTGTTAGGTAATT+AGG + chr4_3:10285763-10285782 Msa0629430:intron 35.0%
GTGTAACACTTTCATTTGGA+AGG - chr4_3:10285840-10285859 None:intergenic 35.0%
AGCAGTGTAACACTTTCATT+TGG - chr4_3:10285844-10285863 None:intergenic 35.0%
TGATTGGAGGCAAAATCAAT+TGG - chr4_3:10285905-10285924 None:intergenic 35.0%
! TATCACTACTAGTCAAGTTG+AGG - chr4_3:10285992-10286011 None:intergenic 35.0%
GTAATCAAATCTCTTTGCAG+TGG + chr4_3:10286131-10286150 Msa0629430:intron 35.0%
TGTAACATCGAAAGTCCAAA+AGG - chr4_3:10286177-10286196 None:intergenic 35.0%
AAAATGTAGCACATATTGGC+AGG + chr4_3:10286398-10286417 Msa0629430:intron 35.0%
CATTTGTCTCAAACTACACA+AGG - chr4_3:10286501-10286520 None:intergenic 35.0%
! CTTGTGTAGTTTGAGACAAA+TGG + chr4_3:10286499-10286518 Msa0629430:intron 35.0%
! CAAGTTTAAAACATGTCAGG+TGG - chr4_3:10286560-10286579 None:intergenic 35.0%
!! CACCTGACATGTTTTAAACT+TGG + chr4_3:10286558-10286577 Msa0629430:intron 35.0%
! TGCCAAGTTTAAAACATGTC+AGG - chr4_3:10286563-10286582 None:intergenic 35.0%
! ATGACGAACGATGATGTTTT+AGG + chr4_3:10286625-10286644 Msa0629430:three_prime_UTR 35.0%
! TCGAAATGCATTTTGCTGAT+CGG - chr4_3:10286665-10286684 None:intergenic 35.0%
AAACACTTAGATTGGGTGTT+GGG + chr4_3:10286698-10286717 Msa0629430:three_prime_UTR 35.0%
AGCCTTCTTACTTTCATGTA+TGG + chr4_3:10286724-10286743 Msa0629430:intron 35.0%
GCCTTCTTACTTTCATGTAT+GGG + chr4_3:10286725-10286744 Msa0629430:intron 35.0%
ACCCATACATGAAAGTAAGA+AGG - chr4_3:10286729-10286748 None:intergenic 35.0%
! GTTTTGCTCTTCGTACTATT+TGG + chr4_3:10287010-10287029 Msa0629430:intron 35.0%
GTACTCATTTCCTGATTACT+TGG + chr4_3:10287041-10287060 Msa0629430:intron 35.0%
! TTTTCTTGAAAGGGAGAAGA+AGG - chr4_3:10287272-10287291 None:intergenic 35.0%
GAAAATGTTCATATGCTCAC+TGG - chr4_3:10287332-10287351 None:intergenic 35.0%
ATCTATGGCTGTCAAAAACA+AGG + chr4_3:10287408-10287427 Msa0629430:intron 35.0%
TCCTAAACATCACATGAGAT+GGG - chr4_3:10287614-10287633 None:intergenic 35.0%
!! CTATGTGATTTGGTGATTTG+TGG + chr4_3:10287885-10287904 Msa0629430:intron 35.0%
! TGATTTGTGGAAAATGTGCT+TGG + chr4_3:10287898-10287917 Msa0629430:intron 35.0%
AAATGAAGCAACACGAAATC+AGG - chr4_3:10287933-10287952 None:intergenic 35.0%
GCATAGTTAGTATTATGGTG+GGG + chr4_3:10288398-10288417 Msa0629430:intron 35.0%
TTGAGTGGTAAAGATTGAGA+GGG - chr4_3:10288430-10288449 None:intergenic 35.0%
GTTATTGTTACACCATGACT+TGG + chr4_3:10288501-10288520 Msa0629430:intron 35.0%
CGGTAAAACTGAGAATCTAT+AGG - chr4_3:10288638-10288657 None:intergenic 35.0%
TAGTGCATATAACAAAGGGA+AGG + chr4_3:10288756-10288775 Msa0629430:intron 35.0%
AGTGCATATAACAAAGGGAA+GGG + chr4_3:10288757-10288776 Msa0629430:intron 35.0%
GAAGATATGGCTTAGTGAAA+TGG - chr4_3:10288891-10288910 None:intergenic 35.0%
!! GTAAAATGACCACTGATTCT+AGG - chr4_3:10288938-10288957 None:intergenic 35.0%
CGTGAAGATAGTGTTGTAAA+AGG - chr4_3:10289050-10289069 None:intergenic 35.0%
ATTTGGTTATGTTGGTATGC+AGG + chr4_3:10289228-10289247 Msa0629430:intron 35.0%
TTTGGTTATGTTGGTATGCA+GGG + chr4_3:10289229-10289248 Msa0629430:intron 35.0%
CTAATAGTGGTTGTTACTCT+TGG + chr4_3:10289444-10289463 Msa0629430:intron 35.0%
CTTTACATTATCTAGGGATC+TGG + chr4_3:10289536-10289555 Msa0629430:intron 35.0%
! GGCCAGATCTTGAAATTTTA+AGG - chr4_3:10289792-10289811 None:intergenic 35.0%
GAACATGCAATAGTTGGTTA+AGG + chr4_3:10290202-10290221 Msa0629430:intron 35.0%
ATGCAATAGTTGGTTAAGGA+CGG + chr4_3:10290206-10290225 Msa0629430:intron 35.0%
ATTAGGATGACTTCTGTATG+AGG - chr4_3:10290355-10290374 None:intergenic 35.0%
ACATATTCCCACTAGAATAG+TGG + chr4_3:10290460-10290479 Msa0629430:intron 35.0%
CAACCATGTTTCAGTAATAG+AGG + chr4_3:10290843-10290862 Msa0629430:three_prime_UTR 35.0%
GAACCTCTATTACTGAAACA+TGG - chr4_3:10290849-10290868 None:intergenic 35.0%
AGAGCAGATAAAAACAACTC+GGG - chr4_3:10291050-10291069 None:intergenic 35.0%
TGGTAGCTGTGTATGATTAT+TGG + chr4_3:10291096-10291115 Msa0629430:intron 35.0%
CATCTTCCATCTTTCATAGA+AGG - chr4_3:10291150-10291169 None:intergenic 35.0%
AGAAAGAAGTGATTGAACCT+AGG + chr4_3:10291174-10291193 Msa0629430:three_prime_UTR 35.0%
TCCTTACTACAGATATGATC+TGG + chr4_3:10291232-10291251 Msa0629430:three_prime_UTR 35.0%
TCCAGATCATATCTGTAGTA+AGG - chr4_3:10291236-10291255 None:intergenic 35.0%
! ATATGATCTGGAACCATTCA+GGG + chr4_3:10291244-10291263 Msa0629430:three_prime_UTR 35.0%
!! GAAGCCTCATTTTTCTCTTA+TGG + chr4_3:10291303-10291322 Msa0629430:intron 35.0%
! AGGTAAGGAGGAAAGATTTT+TGG + chr4_3:10291356-10291375 Msa0629430:intron 35.0%
! TACTGTCACAAAGCTTTTGA+AGG + chr4_3:10291387-10291406 Msa0629430:three_prime_UTR 35.0%
! TATTTCAGGTGAGTTGTGAA+TGG + chr4_3:10291449-10291468 Msa0629430:intron 35.0%
GGATTTGGAAGTAAAAGGAA+TGG - chr4_3:10291575-10291594 None:intergenic 35.0%
CCCTGGTAAGTAATATAATC+AGG - chr4_3:10291648-10291667 None:intergenic 35.0%
! TTCAGTTGACTTTCTGTTTG+AGG + chr4_3:10291734-10291753 Msa0629430:three_prime_UTR 35.0%
CCAAAACACCATACAAAAGA+AGG - chr4_3:10291769-10291788 None:intergenic 35.0%
! CCTTCTTTTGTATGGTGTTT+TGG + chr4_3:10291766-10291785 Msa0629430:intron 35.0%
AGCAGCTAAAAATTAGATGG+CGG - chr4_3:10291831-10291850 None:intergenic 35.0%
GGAAGCAGCTAAAAATTAGA+TGG - chr4_3:10291834-10291853 None:intergenic 35.0%
!!! GCTACTTTTTGTGTATGAAC+GGG + chr4_3:10291879-10291898 Msa0629430:three_prime_UTR 35.0%
!!! CTACTTTTTGTGTATGAACG+GGG + chr4_3:10291880-10291899 Msa0629430:three_prime_UTR 35.0%
GAAAGAAGAAACTCTTGGAT+GGG + chr4_3:10291902-10291921 Msa0629430:three_prime_UTR 35.0%
ATGTTGTGTGTCTGTAGAAT+AGG + chr4_3:10291993-10292012 Msa0629430:intron 35.0%
ATTTAGACAGTCATGGCATT+TGG + chr4_3:10292018-10292037 Msa0629430:intron 35.0%
TTTAGACAGTCATGGCATTT+GGG + chr4_3:10292019-10292038 Msa0629430:intron 35.0%
!! GCATGGCTTTAGTTTACTTA+TGG + chr4_3:10292175-10292194 Msa0629430:intron 35.0%
!!! CAAGTTTTTTTTTTACGGGG+GGG - chr4_3:10292354-10292373 None:intergenic 35.0%
!!! CCAAGTTTTTTTTTTACGGG+GGG - chr4_3:10292355-10292374 None:intergenic 35.0%
AGCATCTGACTGGATAAAAA+TGG + chr4_3:10292431-10292450 Msa0629430:intron 35.0%
GAATGTAAGAGGATGAAGAA+GGG - chr4_3:10292637-10292656 None:intergenic 35.0%
TGGAAAAACTGGAATGTAAG+AGG - chr4_3:10292648-10292667 None:intergenic 35.0%
CCAGTAATTCATCCAATCAA+GGG - chr4_3:10292766-10292785 None:intergenic 35.0%
CCTTGATTGGATGAATTACT+GGG + chr4_3:10292764-10292783 Msa0629430:intron 35.0%
! TTTGAGGGATTAGTGAATTG+AGG + chr4_3:10292855-10292874 Msa0629430:intron 35.0%
! TTGAGGGATTAGTGAATTGA+GGG + chr4_3:10292856-10292875 Msa0629430:intron 35.0%
GTGTGATGAAGATGATGATT+TGG + chr4_3:10292919-10292938 Msa0629430:intron 35.0%
! ATGATGATTTGGAGAAGAGA+AGG + chr4_3:10292930-10292949 Msa0629430:intron 35.0%
! GCATCTCAATTCGATTTTCA+CGG - chr4_3:10293058-10293077 None:intergenic 35.0%
AAATCGAATTGAGATGCCAT+CGG + chr4_3:10293061-10293080 Msa0629430:intron 35.0%
AAGAAATTGATTGCTTCCGA+TGG - chr4_3:10293080-10293099 None:intergenic 35.0%
! TACATCATCAAACCCTTTTG+TGG + chr4_3:10293297-10293316 Msa0629430:intron 35.0%
TGCAGTTTGTATCCACAAAA+GGG - chr4_3:10293312-10293331 None:intergenic 35.0%
TTGCAGTTTGTATCCACAAA+AGG - chr4_3:10293313-10293332 None:intergenic 35.0%
! CAGTTTGTTTGTTTCAGCAT+TGG + chr4_3:10293386-10293405 Msa0629430:intron 35.0%
AGCACAAAACAAACAGAACA+GGG - chr4_3:10293435-10293454 None:intergenic 35.0%
AAGCACAAAACAAACAGAAC+AGG - chr4_3:10293436-10293455 None:intergenic 35.0%
ACATAGGCAATTGTTACAAG+GGG - chr4_3:10293473-10293492 None:intergenic 35.0%
GTACATAGGCAATTGTTACA+AGG - chr4_3:10293475-10293494 None:intergenic 35.0%
!! TTTGGATTTGTTGTTGGTGT+TGG + chr4_3:10293561-10293580 Msa0629430:intron 35.0%
!! TTGGATTTGTTGTTGGTGTT+GGG + chr4_3:10293562-10293581 Msa0629430:intron 35.0%
! TGTGTTTGTGTTGTTGATAG+AGG + chr4_3:10293661-10293680 Msa0629430:intron 35.0%
! GTGTTTGTGTTGTTGATAGA+GGG + chr4_3:10293662-10293681 Msa0629430:intron 35.0%
TAGAGGGAAGATGATGAATA+TGG + chr4_3:10293678-10293697 Msa0629430:intron 35.0%
AGAGGGAAGATGATGAATAT+GGG + chr4_3:10293679-10293698 Msa0629430:intron 35.0%
AATGGATGAAGAAAAGAGGA+AGG + chr4_3:10293856-10293875 Msa0629430:intron 35.0%
TGGAGAGAAAAGAAAAGAGA+AGG + chr4_3:10293897-10293916 Msa0629430:intron 35.0%
!!! GTTTTTTTTTTTTACCGGGG+GGG + chr4_3:10294170-10294189 Msa0629430:intron 35.0%
!!! TTTTTTTTTTTTACCGGGGG+GGG + chr4_3:10294171-10294190 Msa0629430:intron 35.0%
CACTTGCTTTAATTGCTTTC+TGG + chr4_3:10294624-10294643 Msa0629430:intron 35.0%
GGTAACATTAAATCTGCAGA+TGG + chr4_3:10294645-10294664 Msa0629430:intron 35.0%
! ACAGAACCCTCATTTTATTC+CGG + chr4_3:10294669-10294688 Msa0629430:three_prime_UTR 35.0%
GATCTTTCCGGAATAAAATG+AGG - chr4_3:10294679-10294698 None:intergenic 35.0%
AAAGATCATCGAGTGTTCTT+GGG + chr4_3:10294692-10294711 Msa0629430:three_prime_UTR 35.0%
!! TTCTTGGGATTTTGATAACC+TGG + chr4_3:10294707-10294726 Msa0629430:three_prime_UTR 35.0%
CATAAAAGACAACATCACAG+AGG + chr4_3:10294886-10294905 Msa0629430:three_prime_UTR 35.0%
GTGATTCATTGTGGTTAGAT+AGG + chr4_3:10295018-10295037 Msa0629430:three_prime_UTR 35.0%
GCCTTAAATTATTTCACTGG+TGG + chr4_3:10295051-10295070 Msa0629430:three_prime_UTR 35.0%
CCCACCAGTGAAATAATTTA+AGG - chr4_3:10295055-10295074 None:intergenic 35.0%
TGTCTGCTTCTGGTATTTAT+TGG + chr4_3:10295136-10295155 Msa0629430:three_prime_UTR 35.0%
TATATTTGGCCATCATCCTA+AGG + chr4_3:10295168-10295187 Msa0629430:three_prime_UTR 35.0%
ATGAAATTTGTGACGCAACT+CGG - chr4_3:10295231-10295250 None:intergenic 35.0%
TTGTCTAGATCAATAGGGTT+AGG + chr4_3:10295271-10295290 Msa0629430:three_prime_UTR 35.0%
AGATCAATAGGGTTAGGTTT+AGG + chr4_3:10295277-10295296 Msa0629430:three_prime_UTR 35.0%
AGACTCAAGTTCCATTACAT+TGG + chr4_3:10295374-10295393 Msa0629430:three_prime_UTR 35.0%
GTTTGAACTTTGAATGGTGC+AGG + chr4_3:10278242-10278261 Msa0629430:intron 40.0%
TTTGAATGGTGCAGGGAAAA+AGG + chr4_3:10278250-10278269 Msa0629430:intron 40.0%
!! GTTGTTGGGTGTTTTTACTG+CGG + chr4_3:10278291-10278310 Msa0629430:CDS 40.0%
CCACTTTCTATACGTTCTTC+AGG - chr4_3:10278443-10278462 None:intergenic 40.0%
CCTGAAGAACGTATAGAAAG+TGG + chr4_3:10278440-10278459 Msa0629430:three_prime_UTR 40.0%
ACACTGCCATGAAACCAAAA+GGG - chr4_3:10278514-10278533 None:intergenic 40.0%
TCCAGTATCAATGTCATGTC+CGG - chr4_3:10278575-10278594 None:intergenic 40.0%
TGATGGTAGGAGTAATGTGA+TGG + chr4_3:10278735-10278754 Msa0629430:intron 40.0%
AAACCAGTAACTTGAGGGAT+GGG - chr4_3:10279162-10279181 None:intergenic 40.0%
AAAACCAGTAACTTGAGGGA+TGG - chr4_3:10279163-10279182 None:intergenic 40.0%
ATTGGAAAGAAACCCTTACC+CGG - chr4_3:10279634-10279653 None:intergenic 40.0%
GGGTTTCTTTCCAATTTCCA+TGG + chr4_3:10279639-10279658 Msa0629430:intron 40.0%
CTACATGGTTCCTAGGTTTA+AGG - chr4_3:10279965-10279984 None:intergenic 40.0%
CAGTTAACTACATGGTTCCT+AGG - chr4_3:10279972-10279991 None:intergenic 40.0%
CTAGGAACCATGTAGTTAAC+TGG + chr4_3:10279970-10279989 Msa0629430:intron 40.0%
CACATGACCAGTTAACTACA+TGG - chr4_3:10279980-10279999 None:intergenic 40.0%
! CCCCCACAAATCAAGATTTT+TGG - chr4_3:10280130-10280149 None:intergenic 40.0%
TGGTGCTTGTCCTTTAACAT+TGG - chr4_3:10280434-10280453 None:intergenic 40.0%
AAGCACATTTAGGCTCTGTT+TGG + chr4_3:10280585-10280604 Msa0629430:intron 40.0%
!! ACAACTTGCTAGTCACTACA+TGG - chr4_3:10281066-10281085 None:intergenic 40.0%
! CTGTGTTTGGTAACAACAAG+AGG - chr4_3:10281333-10281352 None:intergenic 40.0%
! ATCCACATATCTGGTATTGG+GGG - chr4_3:10281623-10281642 None:intergenic 40.0%
GATCCACATATCTGGTATTG+GGG - chr4_3:10281624-10281643 None:intergenic 40.0%
CAGATCCACATATCTGGTAT+TGG - chr4_3:10281626-10281645 None:intergenic 40.0%
CTTGAATGCTTTGTCAACCA+TGG + chr4_3:10281914-10281933 Msa0629430:intron 40.0%
! AATCTAAAACAAACAGGCCC+AGG + chr4_3:10281997-10282016 Msa0629430:intron 40.0%
TGGTCTCATTACAACTGTTC+TGG - chr4_3:10282142-10282161 None:intergenic 40.0%
AGCAGCAGAGGATATTGAAA+TGG - chr4_3:10282178-10282197 None:intergenic 40.0%
GTCTCCAATTTGACTAACCA+TGG - chr4_3:10282217-10282236 None:intergenic 40.0%
CAAATTGGAGACAAATGTCG+AGG + chr4_3:10282225-10282244 Msa0629430:intron 40.0%
AAATGTCGAGGAATCTGGTA+AGG + chr4_3:10282237-10282256 Msa0629430:intron 40.0%
GTGTAGAACAATGATGTGCA+CGG - chr4_3:10282548-10282567 None:intergenic 40.0%
ACATCATTGTTCTACACCTG+TGG + chr4_3:10282551-10282570 Msa0629430:intron 40.0%
! AACAGCATGTTTTACACCTG+TGG + chr4_3:10282589-10282608 Msa0629430:intron 40.0%
!!! CCCCTTTTTGGAATTGTCAT+TGG + chr4_3:10282722-10282741 Msa0629430:intron 40.0%
AAGAATGCAACAGGTCTATC+TGG + chr4_3:10282792-10282811 Msa0629430:intron 40.0%
AGAATGCAACAGGTCTATCT+GGG + chr4_3:10282793-10282812 Msa0629430:intron 40.0%
! ATTTTCTGTGGCTACCTTTC+TGG - chr4_3:10282854-10282873 None:intergenic 40.0%
GAAAGGTAGCCACAGAAAAT+TGG + chr4_3:10282854-10282873 Msa0629430:intron 40.0%
AGCCACAGAAAATTGGTTGT+AGG + chr4_3:10282861-10282880 Msa0629430:intron 40.0%
GCCACAGAAAATTGGTTGTA+GGG + chr4_3:10282862-10282881 Msa0629430:intron 40.0%
! ACCCTACAACCAATTTTCTG+TGG - chr4_3:10282866-10282885 None:intergenic 40.0%
ACAGAAAATTGGTTGTAGGG+TGG + chr4_3:10282865-10282884 Msa0629430:intron 40.0%
ATTTGGACGACAAGATCTCT+TGG + chr4_3:10282937-10282956 Msa0629430:intron 40.0%
TTCAAGGTTTCACACAAGAG+TGG + chr4_3:10282989-10283008 Msa0629430:intron 40.0%
TCAAGGTTTCACACAAGAGT+GGG + chr4_3:10282990-10283009 Msa0629430:intron 40.0%
!! ATGTCAGGTTGTGACTTTTC+TGG - chr4_3:10283067-10283086 None:intergenic 40.0%
! GGTTAACTTGAGACTTTGAG+AGG + chr4_3:10283119-10283138 Msa0629430:intron 40.0%
! GCTAGCTGATTCTCTGATTA+AGG + chr4_3:10283226-10283245 Msa0629430:intron 40.0%
!!! ATTAAGGCTTTTTCAGCCCA+GGG + chr4_3:10283242-10283261 Msa0629430:intron 40.0%
CATACATTTCATAGAACCCC+TGG - chr4_3:10283262-10283281 None:intergenic 40.0%
GTATCATACAGCAAATCTCC+TGG - chr4_3:10283633-10283652 None:intergenic 40.0%
!! ATACCTTCTAAGGTTCCTCT+TGG + chr4_3:10283649-10283668 Msa0629430:three_prime_UTR 40.0%
TTCAATGACTGCATCTTTCC+TGG + chr4_3:10283679-10283698 Msa0629430:three_prime_UTR 40.0%
!! AGAGGGTATCAAGCATCTTA+AGG + chr4_3:10284116-10284135 Msa0629430:three_prime_UTR 40.0%
TTGTTCAGATTCAATGCAGG+GGG + chr4_3:10284241-10284260 Msa0629430:intron 40.0%
TTTCGTTTCGTAGCATGCAT+AGG + chr4_3:10284370-10284389 Msa0629430:intron 40.0%
TACACATGGGCATAATCGTA+CGG + chr4_3:10284567-10284586 Msa0629430:three_prime_UTR 40.0%
! TCTGTTACTCAGGTCAGTTT+TGG + chr4_3:10284631-10284650 Msa0629430:intron 40.0%
CGTCTTAATCCAGGTAAACA+GGG - chr4_3:10284696-10284715 None:intergenic 40.0%
CCTGTTTACCTGGATTAAGA+CGG + chr4_3:10284694-10284713 Msa0629430:intron 40.0%
! TCAGAAGATCTTTTCCACTC+CGG - chr4_3:10284873-10284892 None:intergenic 40.0%
CAGGCCCTTAGATTACTAAA+TGG - chr4_3:10285109-10285128 None:intergenic 40.0%
TATTCTCAGTTTGAGTGGAC+AGG - chr4_3:10285128-10285147 None:intergenic 40.0%
GGTTAGGTAAGGAATGAGTT+AGG - chr4_3:10285352-10285371 None:intergenic 40.0%
CCTTACATTTCGGTTAGGTA+AGG - chr4_3:10285363-10285382 None:intergenic 40.0%
CCTTACCTAACCGAAATGTA+AGG + chr4_3:10285360-10285379 Msa0629430:intron 40.0%
!! ACTAGCCTTACATTTCGGTT+AGG - chr4_3:10285368-10285387 None:intergenic 40.0%
!! GCAGTACTAGCCTTACATTT+CGG - chr4_3:10285373-10285392 None:intergenic 40.0%
CTATTTCAAGAGTCCCACAT+TGG - chr4_3:10285432-10285451 None:intergenic 40.0%
TGTGGGACTCTTGAAATAGT+AGG + chr4_3:10285433-10285452 Msa0629430:intron 40.0%
!! GGGTTATATTGGGTTGAGTT+AGG + chr4_3:10285605-10285624 Msa0629430:intron 40.0%
GACTATACTGAATCCGTTGA+TGG + chr4_3:10285652-10285671 Msa0629430:intron 40.0%
GAGTGTGAAGCTCATATGTT+TGG + chr4_3:10285705-10285724 Msa0629430:intron 40.0%
TTGAAGATCAGATGTGAGAG+CGG - chr4_3:10285796-10285815 None:intergenic 40.0%
! ACTTTCATTTGGAAGGGTAC+AGG - chr4_3:10285833-10285852 None:intergenic 40.0%
!! CTACTAGTCAAGTTGAGGTT+TGG - chr4_3:10285987-10286006 None:intergenic 40.0%
GCAGATGATGCCAAAAATCA+AGG + chr4_3:10286333-10286352 Msa0629430:intron 40.0%
! TTTTAAACTAGAGGGGAGTG+CGG + chr4_3:10286433-10286452 Msa0629430:intron 40.0%
! GGCATTTTTCCCATTCTCTT+AGG + chr4_3:10286579-10286598 Msa0629430:intron 40.0%
CATGGTTCTCCTAAGAGAAT+GGG - chr4_3:10286591-10286610 None:intergenic 40.0%
TCATGGTTCTCCTAAGAGAA+TGG - chr4_3:10286592-10286611 None:intergenic 40.0%
CAAACACTTAGATTGGGTGT+TGG + chr4_3:10286697-10286716 Msa0629430:three_prime_UTR 40.0%
! AACACTTAGATTGGGTGTTG+GGG + chr4_3:10286699-10286718 Msa0629430:three_prime_UTR 40.0%
AGACTTACTCTTGGAGTCAA+TGG - chr4_3:10287730-10287749 None:intergenic 40.0%
TGTTCATATGCTCACTGGTA+CGG - chr4_3:10287327-10287346 None:intergenic 40.0%
TCCCATCTCATGTGATGTTT+AGG + chr4_3:10287610-10287629 Msa0629430:intron 40.0%
CTCCTAAACATCACATGAGA+TGG - chr4_3:10287615-10287634 None:intergenic 40.0%
CTCATGTGATGTTTAGGAGA+AGG + chr4_3:10287616-10287635 Msa0629430:intron 40.0%
AGACTTACTCTTGGAGTCAA+TGG + chr4_3:10287730-10287749 Msa0629430:intron 40.0%
TTGTAAGGTCACGAAGTATG+TGG + chr4_3:10287853-10287872 Msa0629430:intron 40.0%
AATATTGTCTTAGCTGCACG+TGG + chr4_3:10287961-10287980 Msa0629430:intron 40.0%
! GCATCAGAAGTACATAAAGC+AGG - chr4_3:10288149-10288168 None:intergenic 40.0%
TGGAAATTGTGTATGTCCTC+TGG - chr4_3:10288207-10288226 None:intergenic 40.0%
AGAGGACATACACAATTTCC+AGG + chr4_3:10288206-10288225 Msa0629430:three_prime_UTR 40.0%
AGAACCTGTTGAGAGAAACT+GGG - chr4_3:10288238-10288257 None:intergenic 40.0%
TAGAACCTGTTGAGAGAAAC+TGG - chr4_3:10288239-10288258 None:intergenic 40.0%
GTTGAGTGGTAAAGATTGAG+AGG - chr4_3:10288431-10288450 None:intergenic 40.0%
ATGCACAATTGTCCAAGTCA+TGG - chr4_3:10288516-10288535 None:intergenic 40.0%
! GTTTTATCCACAACATTGCC+TGG + chr4_3:10288596-10288615 Msa0629430:intron 40.0%
! TAGATTCTCAGTTTTACCGG+AGG + chr4_3:10288639-10288658 Msa0629430:intron 40.0%
CACTACTAGATAGGGTTTAG+AGG - chr4_3:10288741-10288760 None:intergenic 40.0%
CATCATATACCGTGTACCAT+CGG - chr4_3:10289303-10289322 None:intergenic 40.0%
TCATTAGTAGTACTCCTGCA+AGG - chr4_3:10289395-10289414 None:intergenic 40.0%
!! TTGCAGGAGTACTACTAATG+AGG + chr4_3:10289394-10289413 Msa0629430:three_prime_UTR 40.0%
TACATTATCTAGGGATCTGG+TGG + chr4_3:10289539-10289558 Msa0629430:intron 40.0%
AGAAAGGAAAATGCCAGACT+TGG - chr4_3:10289697-10289716 None:intergenic 40.0%
! GAGTAGAGGCATAATGAGAA+AGG - chr4_3:10289713-10289732 None:intergenic 40.0%
AAACCATGCAAAATGTAGCG+AGG - chr4_3:10289744-10289763 None:intergenic 40.0%
TAGGAACACCAAGGATACTT+GGG - chr4_3:10289821-10289840 None:intergenic 40.0%
ACCTAGTGTCCAGTATTCAT+CGG + chr4_3:10289855-10289874 Msa0629430:intron 40.0%
! TAGAACCAGTGGTGATTTGT+AGG - chr4_3:10289970-10289989 None:intergenic 40.0%
TGATAGTCTCTAGTAGTCAG+AGG - chr4_3:10289993-10290012 None:intergenic 40.0%
ATAGAACTGCAGGTTATGAC+TGG - chr4_3:10290036-10290055 None:intergenic 40.0%
AGTATAGAGATTCCAAGTGC+TGG - chr4_3:10290065-10290084 None:intergenic 40.0%
!! TTCTCTAGCTTCTTTTGGAC+CGG + chr4_3:10290126-10290145 Msa0629430:intron 40.0%
! GAATAGGTTGGAAAAATGCC+CGG - chr4_3:10290148-10290167 None:intergenic 40.0%
! TTGGTTGATGTACACCATAG+AGG - chr4_3:10290284-10290303 None:intergenic 40.0%
TTGTCGTATTCCCTTAGAAG+TGG + chr4_3:10290408-10290427 Msa0629430:intron 40.0%
ATCCAGCAATGTGAAATGGT+GGG - chr4_3:10290746-10290765 None:intergenic 40.0%
CTGCTTATTTGAATCTGGCA+AGG - chr4_3:10290788-10290807 None:intergenic 40.0%
CTTGCCAGATTCAAATAAGC+AGG + chr4_3:10290786-10290805 Msa0629430:three_prime_UTR 40.0%
CTCTCCTGCTTATTTGAATC+TGG - chr4_3:10290793-10290812 None:intergenic 40.0%
TGTAGTAAGGATTTCTGCTC+TGG - chr4_3:10291223-10291242 None:intergenic 40.0%
! GATATGATCTGGAACCATTC+AGG + chr4_3:10291243-10291262 Msa0629430:three_prime_UTR 40.0%
!! GGCAGATGGTCTTATATTTC+AGG + chr4_3:10291435-10291454 Msa0629430:three_prime_UTR 40.0%
!! TGAGAGACTGGTTCAAGTTT+TGG + chr4_3:10291539-10291558 Msa0629430:intron 40.0%
!!! AGACTGGTTCAAGTTTTGGA+AGG + chr4_3:10291543-10291562 Msa0629430:intron 40.0%
!!! GGTTCAAGTTTTGGAAGGAT+TGG + chr4_3:10291548-10291567 Msa0629430:intron 40.0%
TCATGAGTACGTGGTACATA+AGG - chr4_3:10291681-10291700 None:intergenic 40.0%
TATGTACCACGTACTCATGA+AGG + chr4_3:10291681-10291700 Msa0629430:three_prime_UTR 40.0%
CTCATGAAGGACTCTTAAAG+TGG + chr4_3:10291694-10291713 Msa0629430:three_prime_UTR 40.0%
GGAAAGAAGAAACTCTTGGA+TGG + chr4_3:10291901-10291920 Msa0629430:three_prime_UTR 40.0%
GAAACTCTTGGATGGGAATA+AGG + chr4_3:10291909-10291928 Msa0629430:three_prime_UTR 40.0%
! GGGAATAAGGTTGCTTTCAA+AGG + chr4_3:10291922-10291941 Msa0629430:three_prime_UTR 40.0%
!! GAACATCATTTTTGCAAGCC+AGG - chr4_3:10292083-10292102 None:intergenic 40.0%
! CAAGCGCAAACCCTTAATTT+TGG - chr4_3:10292132-10292151 None:intergenic 40.0%
CAAAATTAAGGGTTTGCGCT+TGG + chr4_3:10292130-10292149 Msa0629430:intron 40.0%
CTCAAGCCTCAAATTCAAAC+AGG - chr4_3:10292156-10292175 None:intergenic 40.0%
! TTGAATTTGAGGCTTGAGCA+TGG + chr4_3:10292158-10292177 Msa0629430:intron 40.0%
TAAACCAAAAGTCGCCCAAA+TGG - chr4_3:10294208-10294227 None:intergenic 40.0%
CCCCCCGTAAAAAAAAAACT+TGG + chr4_3:10292352-10292371 Msa0629430:intron 40.0%
TTTATCCAGTCAGATGCTGA+CGG - chr4_3:10292429-10292448 None:intergenic 40.0%
! ACTGGATAAAAATGGTGACG+TGG + chr4_3:10292439-10292458 Msa0629430:intron 40.0%
ATGAAGAAGGGTTATCGTGA+GGG - chr4_3:10292625-10292644 None:intergenic 40.0%
GGAATGTAAGAGGATGAAGA+AGG - chr4_3:10292638-10292657 None:intergenic 40.0%
!! GAGGAAGATGATGGAAAAAC+TGG - chr4_3:10292659-10292678 None:intergenic 40.0%
AATCGATTGGAACCCTTGAT+TGG + chr4_3:10292751-10292770 Msa0629430:intron 40.0%
CCCTTGATTGGATGAATTAC+TGG + chr4_3:10292763-10292782 Msa0629430:intron 40.0%
CCCAGTAATTCATCCAATCA+AGG - chr4_3:10292767-10292786 None:intergenic 40.0%
!! GGTTTTCGAATTTGGGGTTT+GGG + chr4_3:10292830-10292849 Msa0629430:intron 40.0%
! ATTTGGGGTTTGGGTATTTG+AGG + chr4_3:10292839-10292858 Msa0629430:intron 40.0%
! TTTGGGGTTTGGGTATTTGA+GGG + chr4_3:10292840-10292859 Msa0629430:intron 40.0%
! TGAGGGATTAGTGAATTGAG+GGG + chr4_3:10292857-10292876 Msa0629430:intron 40.0%
TTAGTGAATTGAGGGGTTTG+AGG + chr4_3:10292864-10292883 Msa0629430:intron 40.0%
TAGTGAATTGAGGGGTTTGA+GGG + chr4_3:10292865-10292884 Msa0629430:intron 40.0%
TGGTTGCAAGTGAAAGAAGA+TGG + chr4_3:10292895-10292914 Msa0629430:intron 40.0%
AAGAGAAGGAAGAACAGTGA+AGG + chr4_3:10292944-10292963 Msa0629430:intron 40.0%
AGTGGGTGAGTTCATGAAAT+TGG - chr4_3:10293033-10293052 None:intergenic 40.0%
AAGAGAACAAGCTGAGATGA+GGG - chr4_3:10293155-10293174 None:intergenic 40.0%
! AGAGTGAGTTGTTGTTCAAG+AGG - chr4_3:10293181-10293200 None:intergenic 40.0%
TTTCTAACGGGAATCCAAAC+AGG + chr4_3:10293247-10293266 Msa0629430:intron 40.0%
! ACCTTGCACAAGAAGTACAT+AGG - chr4_3:10293489-10293508 None:intergenic 40.0%
TGGAAACGCAATAACAACAC+AGG - chr4_3:10293623-10293642 None:intergenic 40.0%
AAGAGGAAGGAGGAAGAAAA+AGG + chr4_3:10293869-10293888 Msa0629430:intron 40.0%
GAAGGAGGAAGAAAAAGGTA+CGG + chr4_3:10293874-10293893 Msa0629430:intron 40.0%
!!! TTTTTTTTTTTACCGGGGGG+GGG + chr4_3:10294172-10294191 Msa0629430:intron 40.0%
TAAACCAAAAGTCGCCCAAA+TGG + chr4_3:10294208-10294227 Msa0629430:intron 40.0%
!!! TTCTCAACCCACTTTTTGGT+GGG - chr4_3:10294494-10294513 None:intergenic 40.0%
!! ACCAAAAAGTGGGTTGAGAA+GGG + chr4_3:10294494-10294513 Msa0629430:intron 40.0%
CAAACTATGAACTGTGGACT+TGG - chr4_3:10294590-10294609 None:intergenic 40.0%
AGAACACTCGATGATCTTTC+CGG - chr4_3:10294691-10294710 None:intergenic 40.0%
GAAAGATCATCGAGTGTTCT+TGG + chr4_3:10294691-10294710 Msa0629430:three_prime_UTR 40.0%
!! GGGATTTTGATAACCTGGAA+TGG + chr4_3:10294712-10294731 Msa0629430:three_prime_UTR 40.0%
TTTATCCTGTCCGCATACAT+GGG - chr4_3:10294950-10294969 None:intergenic 40.0%
! TTTTATCCTGTCCGCATACA+TGG - chr4_3:10294951-10294970 None:intergenic 40.0%
TGGGAGAATGAGATGTTTGT+AGG + chr4_3:10295071-10295090 Msa0629430:three_prime_UTR 40.0%
GGGAGAATGAGATGTTTGTA+GGG + chr4_3:10295072-10295091 Msa0629430:three_prime_UTR 40.0%
TGTTTGTAGGGTAGAAGATC+AGG + chr4_3:10295084-10295103 Msa0629430:three_prime_UTR 40.0%
CATAAGCAACCTTAGGATGA+TGG - chr4_3:10295180-10295199 None:intergenic 40.0%
! GCAAGCCTTCCATTCTTTTT+AGG + chr4_3:10295474-10295493 Msa0629430:three_prime_UTR 40.0%
TTTGAATGCATCTCCGGTAC+CGG + chr4_3:10278361-10278380 Msa0629430:three_prime_UTR 45.0%
CACTGCCATGAAACCAAAAG+GGG - chr4_3:10278513-10278532 None:intergenic 45.0%
GACACTGCCATGAAACCAAA+AGG - chr4_3:10278515-10278534 None:intergenic 45.0%
ATGGCAGTGTCAACTTACGT+TGG + chr4_3:10278524-10278543 Msa0629430:intron 45.0%
TGAAGCACAAACACGAACAC+CGG + chr4_3:10278553-10278572 Msa0629430:intron 45.0%
ACCGGACATGACATTGATAC+TGG + chr4_3:10278571-10278590 Msa0629430:intron 45.0%
!! TGTTGGTGTCGTGTCATTGT+CGG + chr4_3:10278650-10278669 Msa0629430:intron 45.0%
TATCACAAGTGTAGGCGCTA+TGG + chr4_3:10278691-10278710 Msa0629430:intron 45.0%
AACCAGTAACTTGAGGGATG+GGG - chr4_3:10279161-10279180 None:intergenic 45.0%
!!! GTATCTTTTTTAGGAGCGCG+AGG + chr4_3:10279480-10279499 Msa0629430:intron 45.0%
AGGTGACTGTGAATGATGCA+CGG - chr4_3:10279548-10279567 None:intergenic 45.0%
TGATACAAGTAGGCTTCCTC+CGG + chr4_3:10279612-10279631 Msa0629430:three_prime_UTR 45.0%
AGCAAGTGGACCATGGAAAT+TGG - chr4_3:10279652-10279671 None:intergenic 45.0%
TGATTATCACTGGCAGCAAG+TGG - chr4_3:10279666-10279685 None:intergenic 45.0%
TGACTAGCAAGTTGTGAGCA+TGG + chr4_3:10281071-10281090 Msa0629430:intron 45.0%
TGCTGTAGGCCATATAAACG+TGG + chr4_3:10281095-10281114 Msa0629430:intron 45.0%
GCTGTAGGCCATATAAACGT+GGG + chr4_3:10281096-10281115 Msa0629430:intron 45.0%
GCCATATAAACGTGGGAAGT+GGG + chr4_3:10281103-10281122 Msa0629430:intron 45.0%
ACCCACTTCCCACGTTTATA+TGG - chr4_3:10281107-10281126 None:intergenic 45.0%
ATATAAACGTGGGAAGTGGG+TGG + chr4_3:10281106-10281125 Msa0629430:intron 45.0%
TACCCCCAATACCAGATATG+TGG + chr4_3:10281618-10281637 Msa0629430:intron 45.0%
! ATAGAGTGTCTACAGTCCAC+AGG - chr4_3:10281651-10281670 None:intergenic 45.0%
! GAGCCCTTTGTCTGATAATG+AGG - chr4_3:10281677-10281696 None:intergenic 45.0%
CAACTGTTCTGGTCAAACTC+AGG - chr4_3:10282131-10282150 None:intergenic 45.0%
GAGACAAATGTCGAGGAATC+TGG + chr4_3:10282232-10282251 Msa0629430:intron 45.0%
TCTCATTAACAGCCGTCAAG+AGG - chr4_3:10282287-10282306 None:intergenic 45.0%
TAGAACAATGATGTGCACGG+TGG - chr4_3:10282545-10282564 None:intergenic 45.0%
ACACCTGTGGTCAACAACTT+CGG + chr4_3:10282602-10282621 Msa0629430:intron 45.0%
! AAGCCTTGTATCAGTGACCA+CGG - chr4_3:10282819-10282838 None:intergenic 45.0%
TAGAAGCTTCACACGTGAGA+TGG + chr4_3:10282906-10282925 Msa0629430:intron 45.0%
AGAAGCTTCACACGTGAGAT+GGG + chr4_3:10282907-10282926 Msa0629430:intron 45.0%
ACGACAAGATCTCTTGGAAC+AGG + chr4_3:10282943-10282962 Msa0629430:intron 45.0%
CAAGATCTCTTGGAACAGGA+TGG + chr4_3:10282947-10282966 Msa0629430:intron 45.0%
ATCTCTTGGAACAGGATGGT+TGG + chr4_3:10282951-10282970 Msa0629430:intron 45.0%
GCACTGTCTGATGTGATTCA+AGG + chr4_3:10282973-10282992 Msa0629430:intron 45.0%
!! TCACGAGAGTTGATGTTGCA+GGG + chr4_3:10283020-10283039 Msa0629430:intron 45.0%
GTTGCAGGGAAATTTCAGAG+TGG + chr4_3:10283034-10283053 Msa0629430:intron 45.0%
GGAAATTTCAGAGTGGTGGT+TGG + chr4_3:10283041-10283060 Msa0629430:intron 45.0%
!!! GATTAAGGCTTTTTCAGCCC+AGG + chr4_3:10283241-10283260 Msa0629430:intron 45.0%
!!! TTAAGGCTTTTTCAGCCCAG+GGG + chr4_3:10283243-10283262 Msa0629430:intron 45.0%
TTATCAACGGAGTCAGTGCA+TGG - chr4_3:10283394-10283413 None:intergenic 45.0%
!! CACTGACTCCGTTGATAATG+AGG + chr4_3:10283396-10283415 Msa0629430:intron 45.0%
TCACCAAGAGGAACCTTAGA+AGG - chr4_3:10283655-10283674 None:intergenic 45.0%
!! TCTTGATTTGCAGCTTGGTC+TGG + chr4_3:10284041-10284060 Msa0629430:intron 45.0%
! TGTCACTGGATAGTATCGAG+AGG - chr4_3:10284085-10284104 None:intergenic 45.0%
ACACATGGGCATAATCGTAC+GGG + chr4_3:10284568-10284587 Msa0629430:three_prime_UTR 45.0%
GAGAGAGAGCTACCGTAATA+AGG - chr4_3:10284662-10284681 None:intergenic 45.0%
CCGTCTTAATCCAGGTAAAC+AGG - chr4_3:10284697-10284716 None:intergenic 45.0%
CGGGTTTATAGATTCCTGGA+GGG - chr4_3:10284782-10284801 None:intergenic 45.0%
TCGGGTTTATAGATTCCTGG+AGG - chr4_3:10284783-10284802 None:intergenic 45.0%
ACACTCAAACCCTTCATTCG+AGG - chr4_3:10285691-10285710 None:intergenic 45.0%
!! AACTACGCTGGTGACTTGTT+AGG + chr4_3:10285755-10285774 Msa0629430:intron 45.0%
!! CTAGTCAAGTTGAGGTTTGG+AGG - chr4_3:10285984-10286003 None:intergenic 45.0%
TCATCTGTGAGCTTGTCTCA+TGG - chr4_3:10286609-10286628 None:intergenic 45.0%
! AATGCATTTTGCTGATCGGC+AGG - chr4_3:10286661-10286680 None:intergenic 45.0%
CGTACAACAACCAAACCCTA+TGG - chr4_3:10287249-10287268 None:intergenic 45.0%
GTTCATATGCTCACTGGTAC+GGG - chr4_3:10287326-10287345 None:intergenic 45.0%
CACACTAGTGGTTAGTGAAC+TGG - chr4_3:10288180-10288199 None:intergenic 45.0%
TTCACTAACCACTAGTGTGC+AGG + chr4_3:10288181-10288200 Msa0629430:intron 45.0%
ACACAATGGAAAGATCAGGC+TGG - chr4_3:10288483-10288502 None:intergenic 45.0%
AACCGTATGCCTAGAATCAG+TGG + chr4_3:10288926-10288945 Msa0629430:intron 45.0%
!! GACCACTGATTCTAGGCATA+CGG - chr4_3:10288931-10288950 None:intergenic 45.0%
ATTGTCGAAGGGTCCAAATG+AGG + chr4_3:10289366-10289385 Msa0629430:three_prime_UTR 45.0%
TCCAAATGAGGTTTCCTTGC+AGG + chr4_3:10289378-10289397 Msa0629430:three_prime_UTR 45.0%
TCCTGCAAGGAAACCTCATT+TGG - chr4_3:10289382-10289401 None:intergenic 45.0%
! AGTCCTCGCTACATTTTGCA+TGG + chr4_3:10289738-10289757 Msa0629430:intron 45.0%
CCAAGGATACTTGGGTGATT+TGG - chr4_3:10289813-10289832 None:intergenic 45.0%
CCAAATCACCCAAGTATCCT+TGG + chr4_3:10289810-10289829 Msa0629430:intron 45.0%
CTAGGAACACCAAGGATACT+TGG - chr4_3:10289822-10289841 None:intergenic 45.0%
!! TATCCTTGGTGTTCCTAGAC+TGG + chr4_3:10289824-10289843 Msa0629430:intron 45.0%
ACCGATGAATACTGGACACT+AGG - chr4_3:10289859-10289878 None:intergenic 45.0%
CACTGAACACCGATGAATAC+TGG - chr4_3:10289867-10289886 None:intergenic 45.0%
TTCTATCGTCTACCAGCACT+TGG + chr4_3:10290050-10290069 Msa0629430:intron 45.0%
CAGGCTTTCATGAGAATGAG+AGG - chr4_3:10290088-10290107 None:intergenic 45.0%
!! TCTCTAGCTTCTTTTGGACC+GGG + chr4_3:10290127-10290146 Msa0629430:intron 45.0%
! TGGTGTTGGGAAATCCTCTA+TGG + chr4_3:10290267-10290286 Msa0629430:intron 45.0%
CATCCAGCAATGTGAAATGG+TGG - chr4_3:10290747-10290766 None:intergenic 45.0%
CACCATTTCACATTGCTGGA+TGG + chr4_3:10290745-10290764 Msa0629430:three_prime_UTR 45.0%
CACCATCCAGCAATGTGAAA+TGG - chr4_3:10290750-10290769 None:intergenic 45.0%
AGCGACCCTTCTATGAAAGA+TGG + chr4_3:10291141-10291160 Msa0629430:intron 45.0%
TGATGTCGTTCGTGATTCCT+AGG - chr4_3:10291194-10291213 None:intergenic 45.0%
TTCAAGATGCATGCCCTGAA+TGG - chr4_3:10291260-10291279 None:intergenic 45.0%
AAACTCTCACATGAGGCAGA+TGG + chr4_3:10291421-10291440 Msa0629430:three_prime_UTR 45.0%
! GCTGATTCTTGATGAGAGAC+TGG + chr4_3:10291527-10291546 Msa0629430:intron 45.0%
AAGAGTCCTTCATGAGTACG+TGG - chr4_3:10291690-10291709 None:intergenic 45.0%
ACGGGGAAAGAAGAAACTCT+TGG + chr4_3:10291897-10291916 Msa0629430:three_prime_UTR 45.0%
GCTTGGCCTGTTTGAATTTG+AGG + chr4_3:10292147-10292166 Msa0629430:intron 45.0%
AATGAGGTGGCACTTTGACT+TGG + chr4_3:10292483-10292502 Msa0629430:intron 45.0%
GATGAAGAAGGGTTATCGTG+AGG - chr4_3:10292626-10292645 None:intergenic 45.0%
!! CCAATCGATTTTGTGCGTGA+GGG - chr4_3:10292741-10292760 None:intergenic 45.0%
!! TCCAATCGATTTTGTGCGTG+AGG - chr4_3:10292742-10292761 None:intergenic 45.0%
!! GGGTTTTCGAATTTGGGGTT+TGG + chr4_3:10292829-10292848 Msa0629430:intron 45.0%
! AGGGGTTTGAGGGATGTTTT+TGG + chr4_3:10292875-10292894 Msa0629430:intron 45.0%
GTGAAGGAAGAAGAGAGAAG+AGG + chr4_3:10292960-10292979 Msa0629430:intron 45.0%
! ATTCGATTTTCACGGCGAGT+GGG - chr4_3:10293050-10293069 None:intergenic 45.0%
! AATTCGATTTTCACGGCGAG+TGG - chr4_3:10293051-10293070 None:intergenic 45.0%
GAAGAGAACAAGCTGAGATG+AGG - chr4_3:10293156-10293175 None:intergenic 45.0%
GTTGCTTCTAAGTGCCTGTT+TGG - chr4_3:10293264-10293283 None:intergenic 45.0%
AGCTAGCAGAAAAACAGCCT+GGG - chr4_3:10293361-10293380 None:intergenic 45.0%
AAGCTAGCAGAAAAACAGCC+TGG - chr4_3:10293362-10293381 None:intergenic 45.0%
GCCTATGTACTTCTTGTGCA+AGG + chr4_3:10293485-10293504 Msa0629430:intron 45.0%
GGATGAAGAAAAGAGGAAGG+AGG + chr4_3:10293859-10293878 Msa0629430:intron 45.0%
!!! GCATTTTTGGCTTGCTGAGT+TGG - chr4_3:10294048-10294067 None:intergenic 45.0%
ACTGTACGGATAAGCTGATG+TGG - chr4_3:10294092-10294111 None:intergenic 45.0%
AGCTTATCCGTACAGTCAGA+TGG + chr4_3:10294096-10294115 Msa0629430:intron 45.0%
GCTTATCCGTACAGTCAGAT+GGG + chr4_3:10294097-10294116 Msa0629430:intron 45.0%
!!! TTTTTTTTTTACCGGGGGGG+GGG + chr4_3:10294173-10294192 Msa0629430:intron 45.0%
!!! CTTCTCAACCCACTTTTTGG+TGG - chr4_3:10294495-10294514 None:intergenic 45.0%
!! CACCAAAAAGTGGGTTGAGA+AGG + chr4_3:10294493-10294512 Msa0629430:intron 45.0%
!! ACCCTTCTCAACCCACTTTT+TGG - chr4_3:10294498-10294517 None:intergenic 45.0%
TTCGCAGGAATATCCATTCC+AGG - chr4_3:10294728-10294747 None:intergenic 45.0%
AATTCGCCTTCCCATGTATG+CGG + chr4_3:10294937-10294956 Msa0629430:three_prime_UTR 45.0%
! TAACCATTGGTGTCTGCTTC+TGG + chr4_3:10295126-10295145 Msa0629430:three_prime_UTR 45.0%
ATACCAGAAGCAGACACCAA+TGG - chr4_3:10295132-10295151 None:intergenic 45.0%
!!! TTATACTTAATTATTTTAAA+TGG - chr4_3:10280179-10280198 None:intergenic 5.0%
!! ATAATAAAATTAAATTAACA+AGG + chr4_3:10281147-10281166 Msa0629430:intron 5.0%
!!! AATAATTATTGAATAATTTT+AGG - chr4_3:10281570-10281589 None:intergenic 5.0%
!! ATTAAAACATTAAAAAAAAA+AGG - chr4_3:10281723-10281742 None:intergenic 5.0%
!!! AATTTTTTTGTAAAATTAAA+TGG - chr4_3:10286047-10286066 None:intergenic 5.0%
!! AAAAAATGTAAAAATTAATT+GGG - chr4_3:10289189-10289208 None:intergenic 5.0%
!! ATATATTGTAAAATATATAA+AGG - chr4_3:10289606-10289625 None:intergenic 5.0%
!!! ATTAAATTAAGTTTTAATAA+AGG - chr4_3:10292554-10292573 None:intergenic 5.0%
!!! TTTTTTTTTTTTAATGTTTT+AGG + chr4_3:10293926-10293945 Msa0629430:intron 5.0%
TCTTCATCTTCCTCCGGTAC+CGG - chr4_3:10278377-10278396 None:intergenic 50.0%
!! GCGCTATGGTGCTTTGGAAT+AGG + chr4_3:10278705-10278724 Msa0629430:intron 50.0%
ACCAGTAACTTGAGGGATGG+GGG - chr4_3:10279160-10279179 None:intergenic 50.0%
TGATGCACGGGTCTATCATC+TGG - chr4_3:10279535-10279554 None:intergenic 50.0%
GGTGACTGTGAATGATGCAC+GGG - chr4_3:10279547-10279566 None:intergenic 50.0%
GATACAAGTAGGCTTCCTCC+GGG + chr4_3:10279613-10279632 Msa0629430:three_prime_UTR 50.0%
!! GATTGGCCTGCAGTAGAAAG+TGG + chr4_3:10280065-10280084 Msa0629430:intron 50.0%
GCATCACCACTTTCTACTGC+AGG - chr4_3:10280074-10280093 None:intergenic 50.0%
TGATGCTGCATGAACTGCCT+TGG + chr4_3:10280088-10280107 Msa0629430:intron 50.0%
GTTGTGAGCATGGTTGCTGT+AGG + chr4_3:10281081-10281100 Msa0629430:intron 50.0%
GGCCATATAAACGTGGGAAG+TGG + chr4_3:10281102-10281121 Msa0629430:intron 50.0%
CAGGCACAGATCCACATATC+TGG - chr4_3:10281632-10281651 None:intergenic 50.0%
GATATGTGGATCTGTGCCTG+TGG + chr4_3:10281632-10281651 Msa0629430:intron 50.0%
AATATCCTCTGCTGCTCCCA+TGG + chr4_3:10282182-10282201 Msa0629430:intron 50.0%
ACCATGGAAATTGCGGCCAT+GGG - chr4_3:10282201-10282220 None:intergenic 50.0%
AACCATGGAAATTGCGGCCA+TGG - chr4_3:10282202-10282221 None:intergenic 50.0%
TCAGAAGAGGGACCTCTTGA+CGG + chr4_3:10282272-10282291 Msa0629430:intron 50.0%
GGGCTTGATCTCTTCAGTGA+CGG + chr4_3:10282440-10282459 Msa0629430:intron 50.0%
AACAATGATGTGCACGGTGG+TGG - chr4_3:10282542-10282561 None:intergenic 50.0%
GATCCGAAGTTGTTGACCAC+AGG - chr4_3:10282608-10282627 None:intergenic 50.0%
ACCAGTGAGTCTCCTTGCTT+TGG - chr4_3:10282640-10282659 None:intergenic 50.0%
GTGGTCACTGATACAAGGCT+TGG + chr4_3:10282818-10282837 Msa0629430:intron 50.0%
GAAGCTTCACACGTGAGATG+GGG + chr4_3:10282908-10282927 Msa0629430:intron 50.0%
!! GTGAGATGGGGCATTGGATT+TGG + chr4_3:10282920-10282939 Msa0629430:intron 50.0%
!! CTCACGAGAGTTGATGTTGC+AGG + chr4_3:10283019-10283038 Msa0629430:intron 50.0%
GCAGGGAAATTTCAGAGTGG+TGG + chr4_3:10283037-10283056 Msa0629430:intron 50.0%
GCTAGCGGCCTCATTATCAA+CGG - chr4_3:10283407-10283426 None:intergenic 50.0%
!! GTTGATAATGAGGCCGCTAG+CGG + chr4_3:10283406-10283425 Msa0629430:intron 50.0%
ACCAACTGATCAACCGCTAG+CGG - chr4_3:10283422-10283441 None:intergenic 50.0%
TGGTTAGATTGCCCTCCATC+AGG + chr4_3:10283607-10283626 Msa0629430:three_prime_UTR 50.0%
AAATCTCCTGGCCTGATGGA+GGG - chr4_3:10283621-10283640 None:intergenic 50.0%
TCTCTGTCACCCTGTTTACC+TGG + chr4_3:10284684-10284703 Msa0629430:intron 50.0%
! CTTGAGCACCGTCTTAATCC+AGG - chr4_3:10284705-10284724 None:intergenic 50.0%
GGAGGACAAACTACCATCTC+AGG - chr4_3:10284846-10284865 None:intergenic 50.0%
! GGTAGTTTGTCCTCCTACTC+CGG + chr4_3:10284851-10284870 Msa0629430:three_prime_UTR 50.0%
! GATCTTTTCCACTCCGGAGT+AGG - chr4_3:10284867-10284886 None:intergenic 50.0%
GTTCCTGACGAGGATGATGA+TGG + chr4_3:10284915-10284934 Msa0629430:three_prime_UTR 50.0%
ACTCCATCATCATCCTCGTC+AGG - chr4_3:10284921-10284940 None:intergenic 50.0%
ATACCTGCAAATCAGGGCCT+GGG - chr4_3:10284944-10284963 None:intergenic 50.0%
AGAGAAACTGGGTGTGAACC+TGG - chr4_3:10288227-10288246 None:intergenic 50.0%
CACACCCAGTTTCTCTCAAC+AGG + chr4_3:10288231-10288250 Msa0629430:three_prime_UTR 50.0%
!! GGGAGTGTTAAGGAGTTGAG+TGG - chr4_3:10288445-10288464 None:intergenic 50.0%
! ATCAGGCTGGCTATGTGGTT+GGG - chr4_3:10288470-10288489 None:intergenic 50.0%
! GAAAGATCAGGCTGGCTATG+TGG - chr4_3:10288475-10288494 None:intergenic 50.0%
TATGCAACATGGAAGGCCGA+TGG + chr4_3:10289284-10289303 Msa0629430:three_prime_UTR 50.0%
TGTCGCCTACAAATCACCAC+TGG + chr4_3:10289962-10289981 Msa0629430:intron 50.0%
GTAGTCAGAGGTAGAACCAG+TGG - chr4_3:10289981-10290000 None:intergenic 50.0%
CTGGTAGACGATAGAACTGC+AGG - chr4_3:10290046-10290065 None:intergenic 50.0%
AGCTGTAACCAACTCCAAGC+TGG + chr4_3:10290247-10290266 Msa0629430:intron 50.0%
AACCAACTCCAAGCTGGTGT+TGG + chr4_3:10290253-10290272 Msa0629430:intron 50.0%
ACCAACTCCAAGCTGGTGTT+GGG + chr4_3:10290254-10290273 Msa0629430:intron 50.0%
AGGATTTCCCAACACCAGCT+TGG - chr4_3:10290264-10290283 None:intergenic 50.0%
GACCCACCATTTCACATTGC+TGG + chr4_3:10290741-10290760 Msa0629430:three_prime_UTR 50.0%
CACATTGCTGGATGGTGAGA+TGG + chr4_3:10290753-10290772 Msa0629430:three_prime_UTR 50.0%
GGGAAAGACACGTTCAACTG+AGG - chr4_3:10291030-10291049 None:intergenic 50.0%
!! TTTTAGCTGCTTCCATCGGC+AGG + chr4_3:10291840-10291859 Msa0629430:intron 50.0%
! ATCGGCAGGTTGAAGGTGAT+CGG + chr4_3:10291854-10291873 Msa0629430:intron 50.0%
!! CTTTTACCCCCCTGCCATTT+GGG + chr4_3:10292314-10292333 Msa0629430:intron 50.0%
AAAAGTCGCCCAAATGGCAG+GGG - chr4_3:10292325-10292344 None:intergenic 50.0%
CAAAAGTCGCCCAAATGGCA+GGG - chr4_3:10292326-10292345 None:intergenic 50.0%
!! AGATGCTGACGGTTGGCTTT+GGG - chr4_3:10292418-10292437 None:intergenic 50.0%
GGCAAGGAAGAGGAAGATGA+TGG - chr4_3:10292668-10292687 None:intergenic 50.0%
GTGAGAGAAGAAGACGACGA+GGG - chr4_3:10292689-10292708 None:intergenic 50.0%
TGTGAGAGAAGAAGACGACG+AGG - chr4_3:10292690-10292709 None:intergenic 50.0%
CCCTCACGCACAAAATCGAT+TGG + chr4_3:10292738-10292757 Msa0629430:intron 50.0%
AGAGAAGAGGATGAGTTCGC+TGG + chr4_3:10292973-10292992 Msa0629430:intron 50.0%
GAACAAGCTGAGATGAGGGA+AGG - chr4_3:10293151-10293170 None:intergenic 50.0%
! GTTTGTTTCAGCATTGGGCG+CGG + chr4_3:10293392-10293411 Msa0629430:intron 50.0%
! GGAGGAAGAAAAAGGTACGG+TGG + chr4_3:10293877-10293896 Msa0629430:intron 50.0%
GTACGGATAAGCTGATGTGG+CGG - chr4_3:10294089-10294108 None:intergenic 50.0%
CCTAAGCCCATCTGACTGTA+CGG - chr4_3:10294106-10294125 None:intergenic 50.0%
! CGTACAGTCAGATGGGCTTA+GGG + chr4_3:10294104-10294123 Msa0629430:intron 50.0%
!!! TTTTTTTTTACCGGGGGGGG+GGG + chr4_3:10294174-10294193 Msa0629430:intron 50.0%
ACCAAAAGTCGCCCAAATGG+CGG + chr4_3:10294211-10294230 Msa0629430:intron 50.0%
ATCTAGCGCCCACCAAAAAG+TGG + chr4_3:10294483-10294502 Msa0629430:intron 50.0%
TCTAGCGCCCACCAAAAAGT+GGG + chr4_3:10294484-10294503 Msa0629430:intron 50.0%
! GAATCACCTTCGCTGCTTTG+CGG - chr4_3:10295005-10295024 None:intergenic 50.0%
GCAGCGAAGGTGATTCATTG+TGG + chr4_3:10295009-10295028 Msa0629430:three_prime_UTR 50.0%
GTGGAGCTGATATAGCACGC+CGG + chr4_3:10278459-10278478 Msa0629430:three_prime_UTR 55.0%
TGGAGCTGATATAGCACGCC+GGG + chr4_3:10278460-10278479 Msa0629430:three_prime_UTR 55.0%
! TCGTGTCATTGTCGGACACC+TGG + chr4_3:10278658-10278677 Msa0629430:intron 55.0%
GTGTAGGCGCTATGGTGCTT+TGG + chr4_3:10278699-10278718 Msa0629430:intron 55.0%
TCCCCCATCCCTCAAGTTAC+TGG + chr4_3:10279156-10279175 Msa0629430:intron 55.0%
AAGTAGGCTTCCTCCGGGTA+AGG + chr4_3:10279618-10279637 Msa0629430:intron 55.0%
AGTAGGCTTCCTCCGGGTAA+GGG + chr4_3:10279619-10279638 Msa0629430:intron 55.0%
GGAAAGAAACCCTTACCCGG+AGG - chr4_3:10279631-10279650 None:intergenic 55.0%
CTGCCTTGGACTGTCAGTGA+CGG + chr4_3:10280102-10280121 Msa0629430:intron 55.0%
GATCCGTCACTGACAGTCCA+AGG - chr4_3:10280108-10280127 None:intergenic 55.0%
TCCCATGGCCGCAATTTCCA+TGG + chr4_3:10282197-10282216 Msa0629430:intron 55.0%
GCCAAAGCAAGGAGACTCAC+TGG + chr4_3:10282636-10282655 Msa0629430:intron 55.0%
TCACACGTGAGATGGGGCAT+TGG + chr4_3:10282914-10282933 Msa0629430:intron 55.0%
CAAATCTCCTGGCCTGATGG+AGG - chr4_3:10283622-10283641 None:intergenic 55.0%
CAGCAAATCTCCTGGCCTGA+TGG - chr4_3:10283625-10283644 None:intergenic 55.0%
TTTGTCCTCCTACTCCGGAG+TGG + chr4_3:10284856-10284875 Msa0629430:three_prime_UTR 55.0%
! CTTTTCCACTCCGGAGTAGG+AGG - chr4_3:10284864-10284883 None:intergenic 55.0%
TGGTGAAGCAGTTCCTGACG+AGG + chr4_3:10284905-10284924 Msa0629430:three_prime_UTR 55.0%
!! GAGGATGATGATGGAGTCCC+AGG + chr4_3:10284924-10284943 Msa0629430:three_prime_UTR 55.0%
CATACCTGCAAATCAGGGCC+TGG - chr4_3:10284945-10284964 None:intergenic 55.0%
! CAGGCCCTGATTTGCAGGTA+TGG + chr4_3:10284943-10284962 Msa0629430:intron 55.0%
!! TGGTTGGGGTGGGAGTGTTA+AGG - chr4_3:10288455-10288474 None:intergenic 55.0%
! TCAGGCTGGCTATGTGGTTG+GGG - chr4_3:10288469-10288488 None:intergenic 55.0%
! GATCAGGCTGGCTATGTGGT+TGG - chr4_3:10288471-10288490 None:intergenic 55.0%
TCCACAACATTGCCTGGTGC+TGG + chr4_3:10288602-10288621 Msa0629430:intron 55.0%
ACCAGCACCAGGCAATGTTG+TGG - chr4_3:10288606-10288625 None:intergenic 55.0%
GGTTCTCAGAAACCAGCACC+AGG - chr4_3:10288617-10288636 None:intergenic 55.0%
CATGGAAGGCCGATGGTACA+CGG + chr4_3:10289291-10289310 Msa0629430:three_prime_UTR 55.0%
TTCCTGCTGTGCTCCAAGTC+TGG + chr4_3:10289681-10289700 Msa0629430:intron 55.0%
GCGAGGACTTGACAGAGTAG+AGG - chr4_3:10289727-10289746 None:intergenic 55.0%
TGGCCAGTCTAGGAACACCA+AGG - chr4_3:10289830-10289849 None:intergenic 55.0%
! TACTGGACACTAGGTGCCAC+TGG - chr4_3:10289850-10289869 None:intergenic 55.0%
TCCCAACACCAGCTTGGAGT+TGG - chr4_3:10290258-10290277 None:intergenic 55.0%
CATAAGGATCGTCCCAACCC+TGG - chr4_3:10291665-10291684 None:intergenic 55.0%
! TGCTTCCATCGGCAGGTTGA+AGG + chr4_3:10291847-10291866 Msa0629430:intron 55.0%
GATCACCTTCAACCTGCCGA+TGG - chr4_3:10291855-10291874 None:intergenic 55.0%
! TCGGCAGGTTGAAGGTGATC+GGG + chr4_3:10291855-10291874 Msa0629430:intron 55.0%
! GCTTTTACCCCCCTGCCATT+TGG + chr4_3:10292313-10292332 Msa0629430:intron 55.0%
AAAGTCGCCCAAATGGCAGG+GGG - chr4_3:10292324-10292343 None:intergenic 55.0%
CCAAAAGTCGCCCAAATGGC+AGG - chr4_3:10294212-10294231 None:intergenic 55.0%
!! CCTGCCATTTGGGCGACTTT+TGG + chr4_3:10292324-10292343 Msa0629430:intron 55.0%
!! ATGCTGACGGTTGGCTTTGG+GGG - chr4_3:10292416-10292435 None:intergenic 55.0%
!! GATGCTGACGGTTGGCTTTG+GGG - chr4_3:10292417-10292436 None:intergenic 55.0%
!! CAGATGCTGACGGTTGGCTT+TGG - chr4_3:10292419-10292438 None:intergenic 55.0%
TCCAGTCAGATGCTGACGGT+TGG - chr4_3:10292425-10292444 None:intergenic 55.0%
GAAGGGTTATCGTGAGGGAG+AGG - chr4_3:10292620-10292639 None:intergenic 55.0%
AGAAGAAGACGACGAGGGCA+AGG - chr4_3:10292684-10292703 None:intergenic 55.0%
CTCTGCATCATGGTGTTCCC+AGG + chr4_3:10293341-10293360 Msa0629430:intron 55.0%
! CCGTACAGTCAGATGGGCTT+AGG + chr4_3:10294103-10294122 Msa0629430:intron 55.0%
!!! TTTTTTTTACCGGGGGGGGG+GGG + chr4_3:10294175-10294194 Msa0629430:intron 55.0%
CCAAAAGTCGCCCAAATGGC+GGG + chr4_3:10294212-10294231 Msa0629430:intron 55.0%
CAAAAGTCGCCCAAATGGCG+GGG + chr4_3:10294213-10294232 Msa0629430:intron 55.0%
AAAAGTCGCCCAAATGGCGG+GGG + chr4_3:10294214-10294233 Msa0629430:intron 55.0%
! CTTTTACCCCCCCGCCATTT+GGG - chr4_3:10294225-10294244 None:intergenic 55.0%
TCCTGTCCGCATACATGGGA+AGG - chr4_3:10294946-10294965 None:intergenic 55.0%
! GAATGCATCTCCGGTACCGG+AGG + chr4_3:10278364-10278383 Msa0629430:three_prime_UTR 60.0%
CACTGGCAGCAAGTGGACCA+TGG - chr4_3:10279659-10279678 None:intergenic 60.0%
CAACAGGTCTATCTGGGCCG+TGG + chr4_3:10282799-10282818 Msa0629430:intron 60.0%
GGGCCGTGGTCACTGATACA+AGG + chr4_3:10282813-10282832 Msa0629430:intron 60.0%
GCCGCTAGCGGTTGATCAGT+TGG + chr4_3:10283418-10283437 Msa0629430:intron 60.0%
AGATTGCCCTCCATCAGGCC+AGG + chr4_3:10283612-10283631 Msa0629430:three_prime_UTR 60.0%
! TTTTCCGATGCACGCCCTCC+AGG + chr4_3:10284765-10284784 Msa0629430:three_prime_UTR 60.0%
! GATTCCTGGAGGGCGTGCAT+CGG - chr4_3:10284772-10284791 None:intergenic 60.0%
! AGTCCCAGGCCCTGATTTGC+AGG + chr4_3:10284938-10284957 Msa0629430:three_prime_UTR 60.0%
ACCACTAGTGTGCAGGCCAG+AGG + chr4_3:10288188-10288207 Msa0629430:intron 60.0%
TCCTCTGGCCTGCACACTAG+TGG - chr4_3:10288192-10288211 None:intergenic 60.0%
GCTGGCTATGTGGTTGGGGT+GGG - chr4_3:10288465-10288484 None:intergenic 60.0%
TGCCAGACTTGGAGCACAGC+AGG - chr4_3:10289686-10289705 None:intergenic 60.0%
! GGTGTTCCTAGACTGGCCAG+TGG + chr4_3:10289831-10289850 Msa0629430:intron 60.0%
!! TAGGTGCCACTGGCCAGTCT+AGG - chr4_3:10289840-10289859 None:intergenic 60.0%
AAGTCGCCCAAATGGCAGGG+GGG - chr4_3:10292323-10292342 None:intergenic 60.0%
!! TGCTGACGGTTGGCTTTGGG+GGG - chr4_3:10292415-10292434 None:intergenic 60.0%
GCCAACCGTCAGCATCTGAC+TGG + chr4_3:10292421-10292440 Msa0629430:intron 60.0%
GGGTTATCGTGAGGGAGAGG+TGG - chr4_3:10292617-10292636 None:intergenic 60.0%
AGACGACGAGGGCAAGGAAG+AGG - chr4_3:10292678-10292697 None:intergenic 60.0%
GTGCGTGAGGGAGATTGAGC+AGG - chr4_3:10292729-10292748 None:intergenic 60.0%
! GTTTCAGCATTGGGCGCGGT+CGG + chr4_3:10293396-10293415 Msa0629430:intron 60.0%
!!! TTTTTTTACCGGGGGGGGGG+GGG + chr4_3:10294176-10294195 Msa0629430:intron 60.0%
! CCCGCCATTTGGGCGACTTT+TGG - chr4_3:10294215-10294234 None:intergenic 60.0%
! AAAGTCGCCCAAATGGCGGG+GGG + chr4_3:10294215-10294234 Msa0629430:intron 60.0%
! GCTTTTACCCCCCCGCCATT+TGG - chr4_3:10294226-10294245 None:intergenic 60.0%
GCCTTCCCATGTATGCGGAC+AGG + chr4_3:10294942-10294961 Msa0629430:three_prime_UTR 60.0%
CTCATGCCGCAAAGCAGCGA+AGG + chr4_3:10294996-10295015 Msa0629430:three_prime_UTR 60.0%
AACTCGGCAGCACTGCTGCA+AGG - chr4_3:10295215-10295234 None:intergenic 60.0%
! GGCTGGCTATGTGGTTGGGG+TGG - chr4_3:10288466-10288485 None:intergenic 65.0%
!! GCTGACGGTTGGCTTTGGGG+GGG - chr4_3:10292414-10292433 None:intergenic 65.0%
!! CATTGGGCGCGGTCGGTTTG+TGG + chr4_3:10293403-10293422 Msa0629430:intron 65.0%
!! GCTGATGTGGCGGTGCTGAC+TGG - chr4_3:10294079-10294098 None:intergenic 65.0%
!!! TTTTTTACCGGGGGGGGGGG+GGG + chr4_3:10294177-10294196 Msa0629430:intron 65.0%
! AAGTCGCCCAAATGGCGGGG+GGG + chr4_3:10294216-10294235 Msa0629430:intron 65.0%
TGCGGCCATGGGAGCAGCAG+AGG - chr4_3:10282190-10282209 None:intergenic 70.0%
! TTTTTACCGGGGGGGGGGGG+GGG + chr4_3:10294178-10294197 Msa0629430:intron 70.0%
!! GGGCGCGGTCGGTTTGTGGC+TGG + chr4_3:10293407-10293426 Msa0629430:intron 75.0%
! TTTTACCGGGGGGGGGGGGG+GGG + chr4_3:10294179-10294198 Msa0629430:intron 75.0%
! TTTACCGGGGGGGGGGGGGG+GGG + chr4_3:10294180-10294199 Msa0629430:intron 80.0%
! TTACCGGGGGGGGGGGGGGG+GGG + chr4_3:10294181-10294200 Msa0629430:intron 85.0%
! TACCGGGGGGGGGGGGGGGG+GGG + chr4_3:10294182-10294201 Msa0629430:intron 90.0%
! ACCGGGGGGGGGGGGGGGGG+GGG + chr4_3:10294183-10294202 Msa0629430:intron 95.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 10277989 10295499 10277989 ID=Msa0629430;Name=Msa0629430
chr4_3 mRNA 10277989 10295499 10277989 ID=Msa0629430-mRNA-1;Parent=Msa0629430;Name=Msa0629430-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.94|0.94|0.94|0.76|0.77|18|2565|52
chr4_3 exon 10277989 10278090 10277989 ID=Msa0629430-mRNA-1:exon:3171;Parent=Msa0629430-mRNA-1
chr4_3 exon 10278264 10278481 10278264 ID=Msa0629430-mRNA-1:exon:3172;Parent=Msa0629430-mRNA-1
chr4_3 exon 10279493 10279634 10279493 ID=Msa0629430-mRNA-1:exon:3173;Parent=Msa0629430-mRNA-1
chr4_3 exon 10283605 10283756 10283605 ID=Msa0629430-mRNA-1:exon:3174;Parent=Msa0629430-mRNA-1
chr4_3 exon 10284054 10284137 10284054 ID=Msa0629430-mRNA-1:exon:3175;Parent=Msa0629430-mRNA-1
chr4_3 exon 10284249 10284311 10284249 ID=Msa0629430-mRNA-1:exon:3176;Parent=Msa0629430-mRNA-1
chr4_3 exon 10284511 10284642 10284511 ID=Msa0629430-mRNA-1:exon:3177;Parent=Msa0629430-mRNA-1
chr4_3 exon 10284753 10284959 10284753 ID=Msa0629430-mRNA-1:exon:3178;Parent=Msa0629430-mRNA-1
chr4_3 exon 10286601 10286720 10286601 ID=Msa0629430-mRNA-1:exon:3179;Parent=Msa0629430-mRNA-1
chr4_3 exon 10288203 10288252 10288203 ID=Msa0629430-mRNA-1:exon:3180;Parent=Msa0629430-mRNA-1
chr4_3 exon 10289250 10289415 10289250 ID=Msa0629430-mRNA-1:exon:3181;Parent=Msa0629430-mRNA-1
chr4_3 exon 10290727 10290864 10290727 ID=Msa0629430-mRNA-1:exon:3182;Parent=Msa0629430-mRNA-1
chr4_3 exon 10291143 10291265 10291143 ID=Msa0629430-mRNA-1:exon:3183;Parent=Msa0629430-mRNA-1
chr4_3 exon 10291358 10291456 10291358 ID=Msa0629430-mRNA-1:exon:3184;Parent=Msa0629430-mRNA-1
chr4_3 exon 10291666 10291755 10291666 ID=Msa0629430-mRNA-1:exon:3185;Parent=Msa0629430-mRNA-1
chr4_3 exon 10291862 10291943 10291862 ID=Msa0629430-mRNA-1:exon:3186;Parent=Msa0629430-mRNA-1
chr4_3 exon 10294664 10294794 10294664 ID=Msa0629430-mRNA-1:exon:3187;Parent=Msa0629430-mRNA-1
chr4_3 exon 10294875 10295499 10294875 ID=Msa0629430-mRNA-1:exon:3188;Parent=Msa0629430-mRNA-1
chr4_3 CDS 10277989 10278090 10277989 ID=Msa0629430-mRNA-1:cds;Parent=Msa0629430-mRNA-1
chr4_3 CDS 10278264 10278320 10278264 ID=Msa0629430-mRNA-1:cds;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10278321 10278481 10278321 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10279493 10279634 10279493 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10283605 10283756 10283605 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10284054 10284137 10284054 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10284249 10284311 10284249 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10284511 10284642 10284511 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10284753 10284959 10284753 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10286601 10286720 10286601 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10288203 10288252 10288203 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10289250 10289415 10289250 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10290727 10290864 10290727 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10291143 10291265 10291143 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10291358 10291456 10291358 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10291666 10291755 10291666 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10291862 10291943 10291862 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10294664 10294794 10294664 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
chr4_3 three_prime_UTR 10294875 10295499 10294875 ID=Msa0629430-mRNA-1:three_prime_utr;Parent=Msa0629430-mRNA-1
Gene Sequence

>Msa0629430

CGAGTATCTGAAGTAGGAATCGATGATGTGAGTGAAATTGAAGTCAAATGTGATTTTCGTTCTTCATTTGTTCATCTGCATCAAGAAATTATTATTGTTTTGGGAAAAAGGATTGTTGATGAATTAGTAGTTGTTGGGTGTTTTTACTGCGGCGTGTGA
Protein sequence

>Msa0629430

RVSEVGIDDVSEIEVKCDFRSSFVHLHQEIIIVLGKRIVDELVVVGCFYCGV*