AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183420 MtrunA17_Chr1g0211131 97.759 1071 23 1 34 1103 1 1071 0.0 2154
Msa0183420 MtrunA17_Chr2g0282211 40.271 663 367 10 442 1097 279 919 4.28e-150 472
Msa0183420 MtrunA17_Chr2g0282211 46.948 213 109 3 125 335 42 252 2.16e-43 171
Msa0183420 MtrunA17_Chr4g0047301 37.764 662 349 13 461 1102 296 914 9.18e-137 436
Msa0183420 MtrunA17_Chr4g0047301 39.286 252 140 4 125 375 42 281 3.45e-45 177
Msa0183420 MtrunA17_Chr1g0198021 52.727 275 127 2 826 1097 107 381 7.99e-95 307
Msa0183420 MtrunA17_Chr2g0317631 52.364 275 128 2 826 1097 276 550 4.86e-91 305
Msa0183420 MtrunA17_Chr8g0376201 49.462 279 134 4 827 1098 161 439 6.95e-88 291
Msa0183420 MtrunA17_Chr8g0360171 54.015 274 123 2 827 1097 472 745 2.63e-85 293
Msa0183420 MtrunA17_Chr7g0233611 55.310 226 95 3 830 1050 8 232 9.55e-79 261
Msa0183420 MtrunA17_Chr4g0045101 44.128 281 145 4 830 1099 7 286 7.73e-75 250
Msa0183420 MtrunA17_Chr8g0376111 53.363 223 98 2 830 1047 13 234 5.32e-74 248
Msa0183420 MtrunA17_Chr2g0317641 61.017 177 67 1 881 1055 1 177 1.59e-73 241
Msa0183420 MtrunA17_Chr7g0233631 52.679 224 100 3 829 1047 7 229 2.63e-72 243
Msa0183420 MtrunA17_Chr7g0222941 58.046 174 71 1 826 997 60 233 2.18e-64 218
Msa0183420 MtrunA17_Chr2g0285321 45.581 215 112 3 881 1092 1 213 1.78e-50 177
Msa0183420 MtrunA17_Chr2g0317611 46.108 167 71 3 778 935 18 174 7.96e-42 151
Msa0183420 MtrunA17_Chr2g0317621 46.207 145 77 1 955 1098 24 168 1.15e-37 140
Msa0183420 MtrunA17_Chr4g0001491 43.506 154 77 2 867 1020 153 296 1.49e-33 131
Msa0183420 MtrunA17_Chr4g0009054 25.994 327 209 10 519 842 8 304 5.60e-16 80.5
Msa0183420 MtrunA17_Chr8g0369311 28.906 128 81 3 849 976 54 171 3.15e-11 63.9
Msa0183420 MtrunA17_Chr8g0378601 32.258 124 72 4 855 977 25 137 4.29e-11 62.8
Msa0183420 MtrunA17_Chr5g0432831 29.508 122 76 3 855 976 4 115 4.50e-11 62.0
Msa0183420 MtrunA17_Chr3g0108261 29.508 122 76 3 855 976 4 115 4.67e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183420 AT2G16920.1 61.126 1101 358 18 36 1102 37 1101 0.0 1258
Msa0183420 AT2G16920.2 61.126 1101 358 18 36 1102 37 1101 0.0 1258
Msa0183420 AT2G33770.1 41.033 658 320 16 455 1094 292 899 6.43e-140 445
Msa0183420 AT2G33770.1 40.196 204 120 2 137 339 53 255 1.15e-42 169
Msa0183420 AT3G15355.1 51.661 271 125 2 827 1091 305 575 2.30e-85 289
Msa0183420 AT1G53025.1 56.277 231 99 1 827 1055 244 474 2.96e-84 284
Msa0183420 AT1G53025.2 56.277 231 99 1 827 1055 244 474 4.63e-84 284
Msa0183420 AT1G53023.1 50.833 240 94 3 827 1053 21 249 2.42e-73 246
Msa0183420 AT5G41700.5 29.508 122 76 3 855 976 4 115 7.67e-11 62.0
Msa0183420 AT5G41700.2 29.508 122 76 3 855 976 4 115 7.67e-11 62.0
Msa0183420 AT5G41700.1 29.508 122 76 3 855 976 4 115 7.67e-11 62.0

Find 322 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTGTTGCTTTGTAATTT+AGG 0.097466 1_4:-72358771 None:intergenic
TTCCCTTCCTCATACAAATT+AGG 0.168220 1_4:-72364457 None:intergenic
TTGGATCCGTGTTTGTTTAT+TGG 0.182040 1_4:+72360477 Msa0183420:CDS
AAACCAACAGAGGTTGAATT+TGG 0.194483 1_4:-72365326 None:intergenic
ACCCGTTGCCCTGGGTAATA+AGG 0.207009 1_4:-72360359 None:intergenic
AGAATATTGTTCTTCGAAAT+TGG 0.212011 1_4:-72360320 None:intergenic
TGAAGGATGCTAGAAGATTT+TGG 0.214780 1_4:-72364535 None:intergenic
CAAAGCTTTCCTCTTTCTTC+CGG 0.214790 1_4:-72360964 None:intergenic
CCTTGTTGCTTTGTAATTTA+GGG 0.214853 1_4:-72358770 None:intergenic
CTAAAGACTTGAAGCGTATC+AGG 0.215293 1_4:+72360162 Msa0183420:CDS
TATTCAAAAGTCGTTGTTAA+TGG 0.233522 1_4:+72365760 Msa0183420:three_prime_UTR
ATTACATGCAGGTCGTTAAT+AGG 0.237695 1_4:+72363179 Msa0183420:intron
TCCCTTCCTCATACAAATTA+GGG 0.254645 1_4:-72364456 None:intergenic
TGCCATTGATGGTGACAATT+TGG 0.265712 1_4:+72363423 Msa0183420:CDS
CAGAAGATGCTGTTTCTGTT+TGG 0.281002 1_4:-72361453 None:intergenic
CCGTTAGACCATTACTATAT+TGG 0.295218 1_4:+72363598 Msa0183420:CDS
TTTGGACTCTGTTCCTCAGC+TGG 0.295961 1_4:-72360539 None:intergenic
CAGGCAGAGGCAATGAAGTA+TGG 0.300360 1_4:+72364509 Msa0183420:CDS
AAAGCTTTCCTCTTTCTTCC+GGG 0.303565 1_4:-72360963 None:intergenic
AGGAAAAGTTGATGATGTTT+TGG 0.310783 1_4:+72360226 Msa0183420:CDS
TACGCTCATAAGCTTCTTAC+TGG 0.312837 1_4:+72365890 Msa0183420:three_prime_UTR
CAGTTATTATAGGGCCATTT+GGG 0.323204 1_4:+72364200 Msa0183420:CDS
TGGAGTTCTCAGACCTCTCT+TGG 0.325000 1_4:+72361488 Msa0183420:CDS
TTCAGAGTAACAACCGAAAA+TGG 0.326059 1_4:+72363990 Msa0183420:intron
TCGTGTCACTTAGTGAAGTT+GGG 0.334164 1_4:+72365384 Msa0183420:CDS
TTGGCCCTTACCCGTTGCCC+TGG 0.334977 1_4:-72360368 None:intergenic
GCTGGGGCAGCAGAAGAATA+TGG 0.335778 1_4:-72360521 None:intergenic
GGAAAGAAGGAAAACAAAAT+TGG 0.347555 1_4:-72365851 None:intergenic
AAATGGGAATAAAGATACTA+TGG 0.348062 1_4:+72360766 Msa0183420:CDS
AAGCAGGAAAACGAAGAAAA+TGG 0.352886 1_4:+72361409 Msa0183420:CDS
GCAGTTATTATAGGGCCATT+TGG 0.353534 1_4:+72364199 Msa0183420:CDS
TGCTCATGCAAATTGGCAAT+TGG 0.355555 1_4:+72360586 Msa0183420:CDS
CACACAAGCTGTCCGCTCTT+TGG 0.355944 1_4:-72361203 None:intergenic
CCATAGCAATACTCATAATC+TGG 0.361158 1_4:-72361313 None:intergenic
TAAGAAGGTGCAACAAGATT+GGG 0.367714 1_4:+72364015 Msa0183420:CDS
CATTACTATATTGGTGCAAC+TGG 0.368067 1_4:+72363607 Msa0183420:CDS
TTCGTGTCACTTAGTGAAGT+TGG 0.368564 1_4:+72365383 Msa0183420:CDS
CTTCAATATCACCATTCTTA+AGG 0.371241 1_4:-72361528 None:intergenic
GGCAATACATTTCTGAGAAC+TGG 0.372193 1_4:-72363404 None:intergenic
TTGTGAGAGCAGTTATTATA+GGG 0.373302 1_4:+72364191 Msa0183420:CDS
AGAAGATGCTGTTTCTGTTT+GGG 0.373457 1_4:-72361452 None:intergenic
AAGAACAATATTCTTGAAGA+TGG 0.376555 1_4:+72360329 Msa0183420:CDS
CCTTGATCCAGTGGGTGCTT+TGG 0.376915 1_4:+72360790 Msa0183420:CDS
CTTGTGAGAGCAGTTATTAT+AGG 0.376927 1_4:+72364190 Msa0183420:CDS
CCATTTGACTGCACGTGAAC+AGG 0.381025 1_4:-72363343 None:intergenic
CAGAAATGTATTGCCATTGA+TGG 0.382057 1_4:+72363412 Msa0183420:CDS
GCGTGGTCATTACATTCTTA+AGG 0.384676 1_4:+72365229 Msa0183420:CDS
TTGGACTCTGTTCCTCAGCT+GGG 0.384701 1_4:-72360538 None:intergenic
TCAGATTCCGATTCAGATAG+TGG 0.387150 1_4:+72359816 Msa0183420:CDS
AAGATCCATCGGATCTGCTT+TGG 0.388857 1_4:-72360294 None:intergenic
GGAGCTTGAAGGAACAGAAT+TGG 0.389667 1_4:+72365572 Msa0183420:three_prime_UTR
CCCTTATTACCCAGGGCAAC+GGG 0.391634 1_4:+72360358 Msa0183420:CDS
TCTTGGGTTGGAAATATAAC+TGG 0.393199 1_4:+72361505 Msa0183420:CDS
GGGATTGTGACAGAAGTTAA+TGG 0.394175 1_4:+72359771 Msa0183420:CDS
ATTACGTGGTGCTCGGGTCT+TGG 0.394831 1_4:+72360201 Msa0183420:CDS
CTTCAAATTGCGAGAGTGAT+TGG 0.397977 1_4:-72365460 None:intergenic
TTACATGCAGGTCGTTAATA+GGG 0.399446 1_4:+72363180 Msa0183420:intron
AAGGAGTGCAAGGGGAAAGA+AGG 0.399843 1_4:-72365864 None:intergenic
GAAAAGCTTTGGCACTATCT+TGG 0.399987 1_4:-72365363 None:intergenic
TTTCCTCGTTGTCGAATTCT+CGG 0.402203 1_4:-72361261 None:intergenic
TTTGTTGTTGCAGCGGCGTA+GGG 0.405651 1_4:-72358808 None:intergenic
GTCTGTTTAGATGCTTCTGT+TGG 0.410108 1_4:+72361367 Msa0183420:CDS
TTCCTCGTTGTCGAATTCTC+GGG 0.414350 1_4:-72361260 None:intergenic
TACCAACCACATAGATTGCT+TGG 0.417008 1_4:-72362774 None:intergenic
GGCCTTACCGGTGGAACATC+AGG 0.417374 1_4:-72364277 None:intergenic
ATACTACAAAATAACCTTCC+TGG 0.418579 1_4:+72364040 Msa0183420:CDS
ACCAACCACATAGATTGCTT+GGG 0.424681 1_4:-72362773 None:intergenic
CCCGTTGCCCTGGGTAATAA+GGG 0.427204 1_4:-72360358 None:intergenic
TCAAGCTCCTAGAAGTGAAT+TGG 0.427390 1_4:-72365558 None:intergenic
GCAGTCAGCATACTATCATT+CGG 0.427818 1_4:+72364417 Msa0183420:intron
ATTGTGAAACCAGCCGAGTT+GGG 0.428763 1_4:+72361161 Msa0183420:CDS
TGCCTGTCCATGTGTTTAGA+AGG 0.430598 1_4:-72364492 None:intergenic
AGTTAATGGTGATTCTGATT+CGG 0.434593 1_4:+72359785 Msa0183420:CDS
ATTTGTTGTTGCAGCGGCGT+AGG 0.436466 1_4:-72358809 None:intergenic
TTGATTAGAATCTAATTCAA+TGG 0.436489 1_4:-72360699 None:intergenic
TTGCGTCTGGAATATTCTCC+AGG 0.438651 1_4:+72363302 Msa0183420:CDS
CTAAGTGACACGAAAAGCTT+TGG 0.440220 1_4:-72365374 None:intergenic
TTAATTCCTATTGATACTCC+TGG 0.440446 1_4:+72361076 Msa0183420:CDS
GCCATTGATGGTGACAATTT+GGG 0.441062 1_4:+72363424 Msa0183420:CDS
TGGAAAGCAAGTAGGTTAGA+AGG 0.441375 1_4:+72360434 Msa0183420:CDS
GTGGTGCTCGGGTCTTGGTT+AGG 0.441543 1_4:+72360206 Msa0183420:CDS
TATATGAAGGGCTACTTGAT+TGG 0.442331 1_4:+72365263 Msa0183420:CDS
CAAGTTCTAGTTTCACTACA+AGG 0.442611 1_4:+72364556 Msa0183420:CDS
GGACAGAGGGTGGAAAGGGT+TGG 0.444104 1_4:+72365726 Msa0183420:three_prime_UTR
ATAAGAAGGTGCAACAAGAT+TGG 0.445159 1_4:+72364014 Msa0183420:CDS
ATTTGGACAGAGGGTGGAAA+GGG 0.447808 1_4:+72365722 Msa0183420:three_prime_UTR
GAATTAGATTCTAATCAAAC+AGG 0.448123 1_4:+72360704 Msa0183420:CDS
GAAGCTTATGAGCGTAGAAA+AGG 0.449473 1_4:-72365883 None:intergenic
ATTACCCAGGGCAACGGGTA+AGG 0.451412 1_4:+72360363 Msa0183420:CDS
CAGTCAGCATACTATCATTC+GGG 0.451617 1_4:+72364418 Msa0183420:intron
GAAAGAGAAACAAACCTCTC+TGG 0.452552 1_4:-72362896 None:intergenic
GTGACTGTCTTATTTGATGA+TGG 0.452605 1_4:+72360254 Msa0183420:CDS
TGATCACCAGGAGTATCAAT+AGG 0.453192 1_4:-72361082 None:intergenic
ATCCAAGTTCTTCTGTCCCC+TGG 0.453803 1_4:-72363320 None:intergenic
GGAGTTCTCAGACCTCTCTT+GGG 0.453980 1_4:+72361489 Msa0183420:CDS
TTAGTGTTTGCTTCACTCAA+AGG 0.456088 1_4:-72365604 None:intergenic
CAATCACTCTCGCAATTTGA+AGG 0.456752 1_4:+72365461 Msa0183420:three_prime_UTR
CAATCTTCAAGATGGCTAGA+TGG 0.456811 1_4:+72360399 Msa0183420:CDS
GCTGAATATCCCTTTGAGTA+TGG 0.457310 1_4:+72365635 Msa0183420:three_prime_UTR
GGTGGAACATCAGGATAATC+TGG 0.458633 1_4:-72364268 None:intergenic
GAAGGTGATGAAAGTAATAA+TGG 0.458746 1_4:+72359876 Msa0183420:CDS
GAATATTCCAGACGCAAGTC+TGG 0.458920 1_4:-72363296 None:intergenic
GGTGAAGAGGCCAAGCTTCA+CGG 0.460949 1_4:-72360898 None:intergenic
CACGGATCCAACTGTAACAT+TGG 0.461020 1_4:-72360465 None:intergenic
TATCCAGCTTCATTGAAGTA+AGG 0.461785 1_4:-72364598 None:intergenic
AAGAGTTGATGTTGCTTGGC+AGG 0.462123 1_4:+72361018 Msa0183420:CDS
GCTGGAGATTACGTGGTGCT+CGG 0.462298 1_4:+72360194 Msa0183420:CDS
CAATATATCTGTGGATTTGT+TGG 0.462801 1_4:+72360106 Msa0183420:CDS
AAGATGGCTAGATGGTTGTC+TGG 0.463989 1_4:+72360407 Msa0183420:CDS
AGCTTCATTGAAGTAAGGCT+TGG 0.464285 1_4:-72364593 None:intergenic
TTCTTACAAGAAACTCCATC+AGG 0.466623 1_4:-72359687 None:intergenic
GCTCATGCAAATTGGCAATT+GGG 0.466739 1_4:+72360587 Msa0183420:CDS
CCTGTTCACGTGCAGTCAAA+TGG 0.467128 1_4:+72363343 Msa0183420:CDS
CAAACAGAAACAGCATCTTC+TGG 0.469108 1_4:+72361454 Msa0183420:CDS
ATCATCATCAACGGTTTCCC+AGG 0.470293 1_4:-72362851 None:intergenic
CCAGATTATGAGTATTGCTA+TGG 0.470546 1_4:+72361313 Msa0183420:CDS
GCTTCTGCCTCTGACCCTAC+CGG 0.470925 1_4:+72360059 Msa0183420:CDS
CGTATCAGGGATTTCACTGC+TGG 0.471251 1_4:+72360176 Msa0183420:CDS
GATCCAGTGGGTGCTTTGGA+AGG 0.472606 1_4:+72360794 Msa0183420:CDS
ACCCAAATTGTCACCATCAA+TGG 0.474038 1_4:-72363425 None:intergenic
AAACCTCTCTGGAATCCTCT+TGG 0.475203 1_4:-72362885 None:intergenic
AAATAAGGAAAGTTGTCATC+AGG 0.476312 1_4:+72360927 Msa0183420:CDS
TTCTCAGACCTCTCTTGGGT+TGG 0.477420 1_4:+72361493 Msa0183420:CDS
GGTGCTTTGGAAGGGAATGA+TGG 0.478745 1_4:+72360803 Msa0183420:CDS
GCTACAGTTGAGGAATCAAA+TGG 0.480553 1_4:+72360749 Msa0183420:CDS
AAAGAGAGCCCGGAAGAAAG+AGG 0.481407 1_4:+72360955 Msa0183420:CDS
AATATAACTGGCCTTAAGAA+TGG 0.481691 1_4:+72361517 Msa0183420:CDS
TCTGAAGAGCAGCAGTCTTA+CGG 0.482277 1_4:-72359935 None:intergenic
TGGATAGCATCTGCAGGTCA+TGG 0.482371 1_4:+72360497 Msa0183420:CDS
AAGCCTTACTTCAATGAAGC+TGG 0.484900 1_4:+72364595 Msa0183420:CDS
TGTAAGTGTCTATGAGCTAG+AGG 0.484914 1_4:+72361285 Msa0183420:CDS
ATTCACTTCTAGGAGCTTGA+AGG 0.487000 1_4:+72365561 Msa0183420:three_prime_UTR
AACCCTAATTTGTATGAGGA+AGG 0.489086 1_4:+72364454 Msa0183420:CDS
AACCGTTGATGATGATGAAA+TGG 0.490510 1_4:+72362858 Msa0183420:CDS
CTTGAAGATTGATGAAGACT+TGG 0.490569 1_4:-72360387 None:intergenic
TCCCTTATTACCCAGGGCAA+CGG 0.491274 1_4:+72360357 Msa0183420:CDS
GGATCATCAACCTTGGCAGC+TGG 0.491551 1_4:-72361238 None:intergenic
TATTAACCCTAATTTGTATG+AGG 0.492737 1_4:+72364450 Msa0183420:CDS
CTCTGACCCTACCGGGCAAG+TGG 0.492972 1_4:+72360067 Msa0183420:CDS
TTTGTAACCAGACTTGCGTC+TGG 0.493114 1_4:+72363289 Msa0183420:CDS
GGACAAGAGTTGATGTTGCT+TGG 0.494025 1_4:+72361014 Msa0183420:CDS
AGTGACTCCACTATCTGAAT+CGG 0.498510 1_4:-72359823 None:intergenic
TTGAATATTTGGACAGAGGG+TGG 0.500463 1_4:+72365716 Msa0183420:three_prime_UTR
GGCTTGTGATGCATATATGA+AGG 0.500917 1_4:+72365250 Msa0183420:CDS
CTCCAGGGGACAGAAGAACT+TGG 0.501131 1_4:+72363318 Msa0183420:CDS
CCTCACCACCCCAACTCGGC+TGG 0.503472 1_4:-72361170 None:intergenic
CCAAAGCACCCACTGGATCA+AGG 0.504338 1_4:-72360790 None:intergenic
TTCCCTTCCAAAGCACCCAC+TGG 0.506268 1_4:-72360797 None:intergenic
AACCACAACACCCACTTGCC+CGG 0.508005 1_4:-72360078 None:intergenic
GTAGTGAAACTAGAACTTGA+AGG 0.508515 1_4:-72364552 None:intergenic
ACAAATCGAATTGCTGCAAG+TGG 0.510781 1_4:-72363271 None:intergenic
CTGGAGATTACGTGGTGCTC+GGG 0.511991 1_4:+72360195 Msa0183420:CDS
GTCTACTGAGAAATCGAAGC+AGG 0.513349 1_4:+72361393 Msa0183420:CDS
AGGATCCTGTCCGTGAAGCT+TGG 0.513455 1_4:+72360888 Msa0183420:CDS
CGTGTGTTGCTTATGAGACT+TGG 0.514596 1_4:-72365954 None:intergenic
CTGGCTTGTGGAAAGCAAGT+AGG 0.515871 1_4:+72360426 Msa0183420:CDS
CAGATTATGAGTATTGCTAT+GGG 0.516113 1_4:+72361314 Msa0183420:CDS
CTATATTGGTGCAACTGGAC+AGG 0.516223 1_4:+72363612 Msa0183420:CDS
TATTTGGACAGAGGGTGGAA+AGG 0.516251 1_4:+72365721 Msa0183420:three_prime_UTR
AGAGGCCAAGCTTCACGGAC+AGG 0.516693 1_4:-72360893 None:intergenic
ACAAGAAACTCCATCAGGTT+CGG 0.516897 1_4:-72359682 None:intergenic
TTTGGGACTCCTTACCAAGA+TGG 0.518715 1_4:+72364217 Msa0183420:CDS
AATTGTGAAACCAGCCGAGT+TGG 0.520716 1_4:+72361160 Msa0183420:CDS
AGCAATGTTGCAGAAGAGAA+TGG 0.521233 1_4:+72363211 Msa0183420:CDS
TTGGGACTCCTTACCAAGAT+GGG 0.521336 1_4:+72364218 Msa0183420:CDS
AGTCCAAATTCAACCTCTGT+TGG 0.522157 1_4:+72365323 Msa0183420:CDS
TCCAGAAAGTTCAGAAAATG+TGG 0.522889 1_4:+72363480 Msa0183420:CDS
GTTTATTGGATAGCATCTGC+AGG 0.522973 1_4:+72360491 Msa0183420:CDS
GAGAATGGAGAGAAAGACTC+TGG 0.523742 1_4:+72363226 Msa0183420:CDS
GTTAATGGTCGGTCTTGCAA+TGG 0.524091 1_4:+72365775 Msa0183420:three_prime_UTR
GAAATTGGTTTAAGATCCAT+CGG 0.524914 1_4:-72360305 None:intergenic
GGCATTTCCCTTATTACCCA+GGG 0.525144 1_4:+72360351 Msa0183420:CDS
TGGCCCTTACCCGTTGCCCT+GGG 0.525541 1_4:-72360367 None:intergenic
ATCCAGTGGGTGCTTTGGAA+GGG 0.526457 1_4:+72360795 Msa0183420:CDS
TGTTGGTTTCAAGTTGATGT+TGG 0.527025 1_4:+72365340 Msa0183420:CDS
CTAACGAGCTACGTGTACTC+TGG 0.527614 1_4:+72359958 Msa0183420:CDS
GATTCTAATCAAACAGGAAG+CGG 0.527792 1_4:+72360710 Msa0183420:CDS
GTGGATTTGTTGGCCCATGA+TGG 0.530712 1_4:+72360116 Msa0183420:CDS
TCAGGAAAGAAAAGAGAGCC+CGG 0.530989 1_4:+72360945 Msa0183420:CDS
TACATGTGACCATACTCAAA+GGG 0.531281 1_4:-72365644 None:intergenic
CTCTTCAAATTGTGAACACT+AGG 0.531868 1_4:+72360993 Msa0183420:CDS
AGAAGAAGAAGAATATGCGA+AGG 0.533429 1_4:-72358842 None:intergenic
ACGAGTTTATGAAGATAGAA+TGG 0.533504 1_4:+72364165 Msa0183420:CDS
ATGGTGATATTGAAGTTACA+TGG 0.536682 1_4:+72361536 Msa0183420:CDS
CATACTATCATTCGGGTGGT+TGG 0.538585 1_4:+72364425 Msa0183420:CDS
GGGCATTTCCCTTATTACCC+AGG 0.538767 1_4:+72360350 Msa0183420:CDS
TTCCATTTCATCATCATCAA+CGG 0.539102 1_4:-72362860 None:intergenic
GAGGAGGGTGATGTTGAGGA+AGG 0.539916 1_4:+72359858 Msa0183420:CDS
ATATAAGCGATGCTGCAACC+TGG 0.540349 1_4:+72362833 Msa0183420:CDS
CAAATTGGCAATTGGGTGAC+CGG 0.541623 1_4:+72360594 Msa0183420:CDS
TATAAGCGATGCTGCAACCT+GGG 0.541756 1_4:+72362834 Msa0183420:CDS
GGGTGAGGAGGGTGATGTTG+AGG 0.543243 1_4:+72359854 Msa0183420:CDS
TTACCCAGGGCAACGGGTAA+GGG 0.543644 1_4:+72360364 Msa0183420:CDS
GCCTTAGCCTTCTAAACACA+TGG 0.544228 1_4:+72364485 Msa0183420:CDS
CACTTGCCCGGTAGGGTCAG+AGG 0.545870 1_4:-72360066 None:intergenic
AGCCTTCTAAACACATGGAC+AGG 0.547075 1_4:+72364490 Msa0183420:CDS
GATGCTGAATCACTTGCAGC+AGG 0.547481 1_4:+72362805 Msa0183420:CDS
CAAAAGTCGTTGTTAATGGT+CGG 0.548365 1_4:+72365764 Msa0183420:three_prime_UTR
CTTCTGCCTCTGACCCTACC+GGG 0.550262 1_4:+72360060 Msa0183420:CDS
AGCGGACAGCTTGTGTGAGG+TGG 0.551137 1_4:+72361209 Msa0183420:CDS
ATTCTAATCAAACAGGAAGC+GGG 0.553763 1_4:+72360711 Msa0183420:CDS
ATGGTTGCAGAAATTCTGAT+AGG 0.554473 1_4:+72359895 Msa0183420:CDS
GAGCGTAGAAAAGGAGTGCA+AGG 0.555597 1_4:-72365874 None:intergenic
TCTTGGTAAGGAGTCCCAAA+TGG 0.557448 1_4:-72364214 None:intergenic
AGAACAATATTCTTGAAGAT+GGG 0.558668 1_4:+72360330 Msa0183420:CDS
GTGGATAAAACCAGCTGCCA+AGG 0.559036 1_4:+72361228 Msa0183420:CDS
ACCCTAATTTGTATGAGGAA+GGG 0.560373 1_4:+72364455 Msa0183420:CDS
CCAATATAGTAATGGTCTAA+CGG 0.560418 1_4:-72363598 None:intergenic
AAGCTTACGAAGAAAGAAGA+AGG 0.560538 1_4:-72358925 None:intergenic
TTGTTGTTGCAGCGGCGTAG+GGG 0.561190 1_4:-72358807 None:intergenic
GCATCATTGTCACAACTAGC+AGG 0.561272 1_4:-72363541 None:intergenic
TTGAGTATGGTCACATGTAG+AGG 0.561925 1_4:+72365648 Msa0183420:three_prime_UTR
GTCTTCATCAATCTTCAAGA+TGG 0.563098 1_4:+72360391 Msa0183420:CDS
CAGGATGGAACGATAGGGTG+TGG 0.564158 1_4:+72361037 Msa0183420:CDS
TCACAATCACCAACCTTGGG+TGG 0.565177 1_4:-72364724 None:intergenic
ATTGAAGTTACATGGGCTGA+TGG 0.566447 1_4:+72361544 Msa0183420:CDS
GGATAGCATCTGCAGGTCAT+GGG 0.566920 1_4:+72360498 Msa0183420:CDS
TTCTTCTGCTGCCCCAGCTG+AGG 0.566936 1_4:+72360526 Msa0183420:CDS
AGGCAGAGGCAATGAAGTAT+GGG 0.567003 1_4:+72364510 Msa0183420:CDS
CAACCGAAAATGGTATAAGA+AGG 0.567441 1_4:+72364000 Msa0183420:CDS
CGAGCTACGTGTACTCTGGA+TGG 0.569200 1_4:+72359962 Msa0183420:CDS
GAAGCAAACACTAACAGAGC+AGG 0.569782 1_4:+72365613 Msa0183420:three_prime_UTR
CATGAACTAGATTCACATGA+AGG 0.572645 1_4:-72360842 None:intergenic
CCCCAAGCAATCTATGTGGT+TGG 0.573456 1_4:+72362772 Msa0183420:CDS
CACTGATGATGAGGGTGAGG+AGG 0.575307 1_4:+72359842 Msa0183420:CDS
TTCTCGGGGATCATCAACCT+TGG 0.575365 1_4:-72361245 None:intergenic
TAATTTGTATGAGGAAGGGA+AGG 0.575736 1_4:+72364459 Msa0183420:CDS
GCTTGTGATGCATATATGAA+GGG 0.576279 1_4:+72365251 Msa0183420:CDS
TACTATGGACCTTGATCCAG+TGG 0.578394 1_4:+72360781 Msa0183420:CDS
ACATTCTGAAAACAAAGAGC+CGG 0.579539 1_4:+72359644 Msa0183420:CDS
CTTCCGCATAAGATACATCA+TGG 0.580666 1_4:-72364701 None:intergenic
ACAACACCCACTTGCCCGGT+AGG 0.581062 1_4:-72360074 None:intergenic
CGTGTCACTTAGTGAAGTTG+GGG 0.581430 1_4:+72365385 Msa0183420:CDS
CTAGATGGTTGTCTGGCTTG+TGG 0.582436 1_4:+72360414 Msa0183420:CDS
GGCTGATGGGATGGTATCAA+CGG 0.583229 1_4:+72361558 Msa0183420:CDS
TAGTTCTATATCAGTATCAA+AGG 0.584362 1_4:+72360868 Msa0183420:CDS
TTGTGAAACCAGCCGAGTTG+GGG 0.585286 1_4:+72361162 Msa0183420:CDS
AAGTTCTAGTTTCACTACAA+GGG 0.585505 1_4:+72364557 Msa0183420:CDS
GCTGGATATGATAAGCAGAC+TGG 0.585847 1_4:+72364613 Msa0183420:CDS
AATGCTAATGCCGAACCTGA+TGG 0.586783 1_4:+72359672 Msa0183420:CDS
CAGTTGCACCAATATAGTAA+TGG 0.587161 1_4:-72363606 None:intergenic
GTTGATGTTGCTTGGCAGGA+TGG 0.587382 1_4:+72361022 Msa0183420:CDS
AAGCAGACTGGAACAGCTGA+AGG 0.588715 1_4:+72364625 Msa0183420:CDS
GCTTGGCAGGATGGAACGAT+AGG 0.589433 1_4:+72361031 Msa0183420:CDS
CTACATGTGACCATACTCAA+AGG 0.589679 1_4:-72365645 None:intergenic
CAACACCCACTTGCCCGGTA+GGG 0.590045 1_4:-72360073 None:intergenic
TGGACTCTGTTCCTCAGCTG+GGG 0.591135 1_4:-72360537 None:intergenic
ACTGTCACCAATGTTACAGT+TGG 0.591231 1_4:+72360458 Msa0183420:CDS
ATGGAGAGAAAGACTCTGGT+AGG 0.593579 1_4:+72363230 Msa0183420:CDS
AGCGTAGAAAAGGAGTGCAA+GGG 0.593717 1_4:-72365873 None:intergenic
TCCTCGTTGTCGAATTCTCG+GGG 0.594726 1_4:-72361259 None:intergenic
AGATTATCCTGATGTTCCAC+CGG 0.594761 1_4:+72364270 Msa0183420:CDS
TTCAGAAGACGCTACAGTTG+AGG 0.595072 1_4:+72360739 Msa0183420:CDS
GTGTTGCTTATGAGACTTGG+AGG 0.596794 1_4:-72365951 None:intergenic
TAGTGTATTTGTTGTTGCAG+CGG 0.598020 1_4:-72358815 None:intergenic
ATCTTCTGGCGAAACTGATG+TGG 0.598531 1_4:+72361468 Msa0183420:CDS
CCAGCCGAGTTGGGGTGGTG+AGG 0.599445 1_4:+72361170 Msa0183420:CDS
TTGAAGTTACATGGGCTGAT+GGG 0.600035 1_4:+72361545 Msa0183420:CDS
CTAAACACATGGACAGGCAG+AGG 0.600258 1_4:+72364496 Msa0183420:CDS
TAAAGACTTGAAGCGTATCA+GGG 0.601171 1_4:+72360163 Msa0183420:CDS
AGCAATACTCATAATCTGGA+TGG 0.604621 1_4:-72361309 None:intergenic
TGCGTCTGGAATATTCTCCA+GGG 0.605811 1_4:+72363303 Msa0183420:CDS
TGAGTATGGTCACATGTAGA+GGG 0.607439 1_4:+72365649 Msa0183420:three_prime_UTR
CCCTAAATTACAAAGCAACA+AGG 0.607922 1_4:+72358770 Msa0183420:five_prime_UTR
CGAAGAAAGAAGAAGGAGCT+CGG 0.607980 1_4:-72358918 None:intergenic
CTTGGCAGGATGGAACGATA+GGG 0.610537 1_4:+72361032 Msa0183420:CDS
TCATGTGAATCTAGTTCATG+TGG 0.611701 1_4:+72360845 Msa0183420:CDS
CTACAGTTGAGGAATCAAAT+GGG 0.612923 1_4:+72360750 Msa0183420:CDS
TGAGTATTGCTATGGGGACG+TGG 0.613021 1_4:+72361321 Msa0183420:CDS
GAAACAAATTCATGATCACC+AGG 0.614441 1_4:-72361094 None:intergenic
GCATCTAAACAGACAGACAC+GGG 0.615674 1_4:-72361358 None:intergenic
GAAGACCTCTGATGATGGTG+AGG 0.615734 1_4:+72361135 Msa0183420:CDS
CACTCCTCACCACCCCAACT+CGG 0.617843 1_4:-72361174 None:intergenic
AGTCTCCAAAGCAGATCCGA+TGG 0.618382 1_4:+72360289 Msa0183420:CDS
GTAGAGAAGACCTCTGATGA+TGG 0.621975 1_4:+72361130 Msa0183420:CDS
AAGAAGGTGCAACAAGATTG+GGG 0.624619 1_4:+72364016 Msa0183420:CDS
AGTCACTGATGATGAGGGTG+AGG 0.629856 1_4:+72359839 Msa0183420:CDS
CATCAGGATAATCTGGCGGA+AGG 0.631572 1_4:-72364261 None:intergenic
TTATATTTCCAACCCAAGAG+AGG 0.633520 1_4:-72361501 None:intergenic
ATTATCCTCACCATCATCAG+AGG 0.638378 1_4:-72361140 None:intergenic
TAGTGGAGTCACTGATGATG+AGG 0.638966 1_4:+72359833 Msa0183420:CDS
AGTTACATGGGCTGATGGGA+TGG 0.639750 1_4:+72361549 Msa0183420:CDS
TGATGAAATGGAAGTCCAAG+AGG 0.640484 1_4:+72362870 Msa0183420:CDS
TACATCACTGAAATTCTGTG+TGG 0.640752 1_4:-72359997 None:intergenic
GGTTGATGTCAATATATCTG+TGG 0.644099 1_4:+72360097 Msa0183420:CDS
TACCGGGCAAGTGGGTGTTG+TGG 0.646507 1_4:+72360076 Msa0183420:CDS
ATGCTGAATCACTTGCAGCA+GGG 0.647161 1_4:+72362806 Msa0183420:CDS
GTAAGTGTCTATGAGCTAGA+GGG 0.648581 1_4:+72361286 Msa0183420:CDS
TCCATGTGTTTAGAAGGCTA+AGG 0.648648 1_4:-72364486 None:intergenic
TCTTATGCGGAAGCCACCCA+AGG 0.649569 1_4:+72364711 Msa0183420:CDS
GATGTAGAAGTTGTTGATCG+TGG 0.653076 1_4:+72360014 Msa0183420:CDS
ACTGATGATGAGGGTGAGGA+GGG 0.653311 1_4:+72359843 Msa0183420:CDS
TGAAACCAGCCGAGTTGGGG+TGG 0.654106 1_4:+72361165 Msa0183420:CDS
TGCTATCCAATAAACAAACA+CGG 0.654292 1_4:-72360483 None:intergenic
TTTCACTGCTGGAGATTACG+TGG 0.654378 1_4:+72360187 Msa0183420:CDS
TCTGACCCTACCGGGCAAGT+GGG 0.654748 1_4:+72360068 Msa0183420:CDS
AGCATCTAAACAGACAGACA+CGG 0.655938 1_4:-72361359 None:intergenic
AGACCATGATGTATCTTATG+CGG 0.659124 1_4:+72364698 Msa0183420:CDS
CAAATCGAATTGCTGCAAGT+GGG 0.661530 1_4:-72363270 None:intergenic
AAGAGCGGACAGCTTGTGTG+AGG 0.667087 1_4:+72361206 Msa0183420:CDS
GGTTTGTTAACTCGTGTGTG+AGG 0.668637 1_4:+72365796 Msa0183420:three_prime_UTR
CCAACCACATAGATTGCTTG+GGG 0.674017 1_4:-72362772 None:intergenic
GCGTAGAAAAGGAGTGCAAG+GGG 0.679096 1_4:-72365872 None:intergenic
GCGTCTGGAATATTCTCCAG+GGG 0.679281 1_4:+72363304 Msa0183420:CDS
TCAGCATACTATCATTCGGG+TGG 0.679522 1_4:+72364421 Msa0183420:CDS
CAGATGAGTGCAAAAGACAC+CGG 0.683231 1_4:-72360613 None:intergenic
TGGTGATATTGAAGTTACAT+GGG 0.687312 1_4:+72361537 Msa0183420:CDS
ACTATGGACCTTGATCCAGT+GGG 0.693134 1_4:+72360782 Msa0183420:CDS
AGTCCAAGAGGATTCCAGAG+AGG 0.694976 1_4:+72362882 Msa0183420:CDS
GTATGGTCACATGTAGAGGG+AGG 0.697805 1_4:+72365652 Msa0183420:three_prime_UTR
TGGACCCCAAGCAATCTATG+TGG 0.699060 1_4:+72362768 Msa0183420:CDS
GGAGTGTTGATGCCAAAGAG+CGG 0.700011 1_4:+72361191 Msa0183420:CDS
GGAACATCAGGATAATCTGG+CGG 0.701804 1_4:-72364265 None:intergenic
AGTGGAGTCACTGATGATGA+GGG 0.708443 1_4:+72359834 Msa0183420:CDS
GAAAGACTCTGGTAGGACCG+CGG 0.708466 1_4:+72363237 Msa0183420:CDS
AAAATGTGGAAGCATCTGAG+AGG 0.709572 1_4:+72363494 Msa0183420:CDS
TCACTGTTCACTGACCAGGA+AGG 0.713454 1_4:-72364054 None:intergenic
AAGTGGGACAGAAAGTGCCG+CGG 0.714231 1_4:-72363254 None:intergenic
AGATTATGAGTATTGCTATG+GGG 0.717944 1_4:+72361315 Msa0183420:CDS
TCCCCGAGAATTCGACAACG+AGG 0.725016 1_4:+72361258 Msa0183420:CDS
ACTGCTATTGTCACTCACAG+AGG 0.736196 1_4:-72365303 None:intergenic
CATCAACTTGAAACCAACAG+AGG 0.738886 1_4:-72365336 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAAAAAATGAATATT+AGG - chr1_4:72359025-72359044 None:intergenic 10.0%
!! AAAAAAAAATCAATAAATTG+GGG - chr1_4:72359415-72359434 None:intergenic 10.0%
!!! TTATTATTGTTATTTAGTTA+AGG + chr1_4:72359453-72359472 Msa0183420:intron 10.0%
!!! ACTTTTATTTTTTGAATATT+TGG + chr1_4:72365705-72365724 Msa0183420:three_prime_UTR 10.0%
!! ATATTAGGAATTAATTGAAA+AGG - chr1_4:72359010-72359029 None:intergenic 15.0%
!! AGCTAAAAAAAAATTAATTG+TGG - chr1_4:72359348-72359367 None:intergenic 15.0%
!!! CTAAGTAAATTTTAAAACTA+TGG + chr1_4:72359496-72359515 Msa0183420:intron 15.0%
!!! TGATATTTTATGATTTTAGA+TGG + chr1_4:72359602-72359621 Msa0183420:intron 15.0%
!!! TATTTTTATTTTCTTTTGAG+TGG + chr1_4:72362320-72362339 Msa0183420:intron 15.0%
!!! ATTTTTATTTTCTTTTGAGT+GGG + chr1_4:72362321-72362340 Msa0183420:intron 15.0%
!!! GTATTCATTTTAATATCTAT+AGG + chr1_4:72362404-72362423 Msa0183420:intron 15.0%
!! TTTCAAATGAAGAAAAATAA+AGG - chr1_4:72363040-72363059 None:intergenic 15.0%
!!! TTATTTTTCTTCATTTGAAA+AGG + chr1_4:72363040-72363059 Msa0183420:intron 15.0%
!! AACTAATCAAAGATAAAATA+GGG - chr1_4:72364774-72364793 None:intergenic 15.0%
!! TAACTAATCAAAGATAAAAT+AGG - chr1_4:72364775-72364794 None:intergenic 15.0%
!! AAAATTTACACCATTAAAAA+AGG + chr1_4:72364862-72364881 Msa0183420:intron 15.0%
!! AAATTTACACCATTAAAAAA+GGG + chr1_4:72364863-72364882 Msa0183420:intron 15.0%
!!! AAATTTTAAAACTATGGAAG+AGG + chr1_4:72359502-72359521 Msa0183420:intron 20.0%
!!! TTTTGATTTGTTTTTGTTGA+TGG - chr1_4:72360657-72360676 None:intergenic 20.0%
!! CAACAAAAACAAATCAAAAT+TGG + chr1_4:72360658-72360677 Msa0183420:CDS 20.0%
!! TTGATTAGAATCTAATTCAA+TGG - chr1_4:72360702-72360721 None:intergenic 20.0%
!!! TTAACTTTTATCAACAGAAT+GGG - chr1_4:72361628-72361647 None:intergenic 20.0%
!!! TTTAACTTTTATCAACAGAA+TGG - chr1_4:72361629-72361648 None:intergenic 20.0%
!!! TCATACAAATTTTAAAACCT+TGG - chr1_4:72361741-72361760 None:intergenic 20.0%
!! GAGTTATAGAATACAAAATA+AGG + chr1_4:72362194-72362213 Msa0183420:intron 20.0%
!! TTATAGAATACAAAATAAGG+TGG + chr1_4:72362197-72362216 Msa0183420:intron 20.0%
!!! TCCACTATGATTTTATATTA+TGG - chr1_4:72362263-72362282 None:intergenic 20.0%
!! AAAATATGACTATCAAACAA+TGG - chr1_4:72362306-72362325 None:intergenic 20.0%
!! ACAAATAACAATTACAATGT+AGG - chr1_4:72362386-72362405 None:intergenic 20.0%
!! ATCTATAAACCAAAATTCAT+GGG - chr1_4:72362551-72362570 None:intergenic 20.0%
!!! GAAAAATAAAGGATTTTGAT+AGG - chr1_4:72363029-72363048 None:intergenic 20.0%
!! AATTATGTAAAATTACATGC+AGG + chr1_4:72363168-72363187 Msa0183420:intron 20.0%
!! TTACAGATTAGTATTATTGT+AGG + chr1_4:72363788-72363807 Msa0183420:intron 20.0%
!!! AATTCTTTTGTTATATCACA+TGG + chr1_4:72363934-72363953 Msa0183420:intron 20.0%
!!! ATTCTTTTGTTATATCACAT+GGG + chr1_4:72363935-72363954 Msa0183420:intron 20.0%
!! TTGTTCACATTTATTGAAAT+GGG - chr1_4:72364115-72364134 None:intergenic 20.0%
!! ATTGTTCACATTTATTGAAA+TGG - chr1_4:72364116-72364135 None:intergenic 20.0%
!!! TGTGGACTAAATTTATATAA+TGG - chr1_4:72364348-72364367 None:intergenic 20.0%
!! ACTAATCAAAGATAAAATAG+GGG - chr1_4:72364773-72364792 None:intergenic 20.0%
!!! TTTTATCTTTGATTAGTTAC+AGG + chr1_4:72364776-72364795 Msa0183420:intron 20.0%
!! TGATAGATTAACTATACATA+CGG - chr1_4:72364836-72364855 None:intergenic 20.0%
!! AAACAACATTTAAATCTTGA+AGG + chr1_4:72364956-72364975 Msa0183420:intron 20.0%
! TAAAAAAAACTATAGCTGCA+GGG - chr1_4:72358983-72359002 None:intergenic 25.0%
! ATAAAAAAAACTATAGCTGC+AGG - chr1_4:72358984-72359003 None:intergenic 25.0%
! TCGGAAAATAAAAATGAAGA+TGG - chr1_4:72359048-72359067 None:intergenic 25.0%
! GCTGAAAGAATAAAAAGAAA+AGG - chr1_4:72359120-72359139 None:intergenic 25.0%
! AAAAATCTGCAGAAAAAACA+CGG - chr1_4:72359162-72359181 None:intergenic 25.0%
! TTCACAAACTAGATTGTAAT+TGG + chr1_4:72359277-72359296 Msa0183420:intron 25.0%
! AAATTGGGGAAAAAAAACAA+AGG - chr1_4:72359401-72359420 None:intergenic 25.0%
! TTGTCAAGAATAAAAACACT+GGG + chr1_4:72359742-72359761 Msa0183420:CDS 25.0%
!! TTTTATGATAGATCCATCAT+GGG - chr1_4:72360132-72360151 None:intergenic 25.0%
! AGAATATTGTTCTTCGAAAT+TGG - chr1_4:72360323-72360342 None:intergenic 25.0%
! AAGAACAATATTCTTGAAGA+TGG + chr1_4:72360329-72360348 Msa0183420:CDS 25.0%
! AGAACAATATTCTTGAAGAT+GGG + chr1_4:72360330-72360349 Msa0183420:CDS 25.0%
!!! GACAGCAATTTTAAGTTTTT+TGG - chr1_4:72360560-72360579 None:intergenic 25.0%
! GAATTAGATTCTAATCAAAC+AGG + chr1_4:72360704-72360723 Msa0183420:CDS 25.0%
! AAATGGGAATAAAGATACTA+TGG + chr1_4:72360766-72360785 Msa0183420:CDS 25.0%
!! TAGTTCTATATCAGTATCAA+AGG + chr1_4:72360868-72360887 Msa0183420:CDS 25.0%
!!! CAACTTTCCTTATTTTTTTG+CGG - chr1_4:72360922-72360941 None:intergenic 25.0%
! TTAGTAGAATATCTAATCAC+CGG - chr1_4:72361798-72361817 None:intergenic 25.0%
!! ATAAAGTACTATTAACACTG+AGG - chr1_4:72361824-72361843 None:intergenic 25.0%
! AACTAGTATTACTAAGGAAA+AGG + chr1_4:72362046-72362065 Msa0183420:intron 25.0%
! ATATATTCACTCAGAAATTG+GGG - chr1_4:72362161-72362180 None:intergenic 25.0%
! CATATATTCACTCAGAAATT+GGG - chr1_4:72362162-72362181 None:intergenic 25.0%
! TCATATATTCACTCAGAAAT+TGG - chr1_4:72362163-72362182 None:intergenic 25.0%
! AGTATGAAAATATCTAGTCA+AGG + chr1_4:72362220-72362239 Msa0183420:intron 25.0%
!! ATGATTTTATATTATGGCAC+AGG - chr1_4:72362257-72362276 None:intergenic 25.0%
! GCCATAATATAAAATCATAG+TGG + chr1_4:72362259-72362278 Msa0183420:intron 25.0%
! ATAGAAAAGCAGTGAATATT+AGG + chr1_4:72362440-72362459 Msa0183420:intron 25.0%
! GATCTATAAACCAAAATTCA+TGG - chr1_4:72362552-72362571 None:intergenic 25.0%
! AAGCAGCAAAATAATAGATT+GGG + chr1_4:72362641-72362660 Msa0183420:intron 25.0%
! CTATAATTTACTTTACTTCC+AGG + chr1_4:72362744-72362763 Msa0183420:intron 25.0%
! ACTTACTAATGCATTATAGT+TGG - chr1_4:72362921-72362940 None:intergenic 25.0%
! AAACAAATCCATTTATCGAA+GGG - chr1_4:72363084-72363103 None:intergenic 25.0%
! AAAACAAATCCATTTATCGA+AGG - chr1_4:72363085-72363104 None:intergenic 25.0%
!!! TCGATAAATGGATTTGTTTT+AGG + chr1_4:72363085-72363104 Msa0183420:intron 25.0%
!!! CGATAAATGGATTTGTTTTA+GGG + chr1_4:72363086-72363105 Msa0183420:intron 25.0%
!!! TAGTTTGAAACATTTTGACA+TGG + chr1_4:72363567-72363586 Msa0183420:CDS 25.0%
!! TTTTCTCGAGATTAGAATTA+AGG - chr1_4:72363649-72363668 None:intergenic 25.0%
! GGGAAATGAAAAAAATGAAT+AGG + chr1_4:72363672-72363691 Msa0183420:intron 25.0%
! GATTAGTATTATTGTAGGTT+AGG + chr1_4:72363793-72363812 Msa0183420:intron 25.0%
!!! CAGTATTGAGTTTTTATCAT+TGG + chr1_4:72363851-72363870 Msa0183420:intron 25.0%
!!! TTCTTTTGTTATATCACATG+GGG + chr1_4:72363936-72363955 Msa0183420:intron 25.0%
!! TATTAACCCTAATTTGTATG+AGG + chr1_4:72364450-72364469 Msa0183420:CDS 25.0%
! ATAAGCAAAACACTTTCTTT+AGG + chr1_4:72364907-72364926 Msa0183420:intron 25.0%
! AGACATTAGAATGCAAATAT+GGG - chr1_4:72365069-72365088 None:intergenic 25.0%
! AAGACATTAGAATGCAAATA+TGG - chr1_4:72365070-72365089 None:intergenic 25.0%
!!! TTTTTTGAATATTTGGACAG+AGG + chr1_4:72365712-72365731 Msa0183420:three_prime_UTR 25.0%
!! TTTTTGAATATTTGGACAGA+GGG + chr1_4:72365713-72365732 Msa0183420:three_prime_UTR 25.0%
! TATTCAAAAGTCGTTGTTAA+TGG + chr1_4:72365760-72365779 Msa0183420:three_prime_UTR 25.0%
!! CCTTGTTGCTTTGTAATTTA+GGG - chr1_4:72358773-72358792 None:intergenic 30.0%
!! TCCTTGTTGCTTTGTAATTT+AGG - chr1_4:72358774-72358793 None:intergenic 30.0%
AAAAGGCGAATGAATAATAG+AGG - chr1_4:72359103-72359122 None:intergenic 30.0%
TTTATTCTTTCAGCTACCTT+AGG + chr1_4:72359126-72359145 Msa0183420:intron 30.0%
CACAGAATCAAACAAAAACA+TGG - chr1_4:72359311-72359330 None:intergenic 30.0%
!!! TTTTAAAACTATGGAAGAGG+TGG + chr1_4:72359505-72359524 Msa0183420:intron 30.0%
GTTGTCAAGAATAAAAACAC+TGG + chr1_4:72359741-72359760 Msa0183420:CDS 30.0%
AGTTAATGGTGATTCTGATT+CGG + chr1_4:72359785-72359804 Msa0183420:CDS 30.0%
GAAGGTGATGAAAGTAATAA+TGG + chr1_4:72359876-72359895 Msa0183420:CDS 30.0%
CAATATATCTGTGGATTTGT+TGG + chr1_4:72360106-72360125 Msa0183420:CDS 30.0%
! CTTTTATGATAGATCCATCA+TGG - chr1_4:72360133-72360152 None:intergenic 30.0%
!!! AGGAAAAGTTGATGATGTTT+TGG + chr1_4:72360226-72360245 Msa0183420:CDS 30.0%
! GAAATTGGTTTAAGATCCAT+CGG - chr1_4:72360308-72360327 None:intergenic 30.0%
TGCTATCCAATAAACAAACA+CGG - chr1_4:72360486-72360505 None:intergenic 30.0%
AAATAAGGAAAGTTGTCATC+AGG + chr1_4:72360927-72360946 Msa0183420:CDS 30.0%
TTAATTCCTATTGATACTCC+TGG + chr1_4:72361076-72361095 Msa0183420:CDS 30.0%
! CAGATTATGAGTATTGCTAT+GGG + chr1_4:72361314-72361333 Msa0183420:CDS 30.0%
! AGATTATGAGTATTGCTATG+GGG + chr1_4:72361315-72361334 Msa0183420:CDS 30.0%
!! AATATAACTGGCCTTAAGAA+TGG + chr1_4:72361517-72361536 Msa0183420:CDS 30.0%
CTTCAATATCACCATTCTTA+AGG - chr1_4:72361531-72361550 None:intergenic 30.0%
ATGGTGATATTGAAGTTACA+TGG + chr1_4:72361536-72361555 Msa0183420:CDS 30.0%
TGGTGATATTGAAGTTACAT+GGG + chr1_4:72361537-72361556 Msa0183420:CDS 30.0%
TTAATACAACACTTGCAATC+TGG + chr1_4:72361689-72361708 Msa0183420:intron 30.0%
AGTATGACTTCAACATAATC+AGG + chr1_4:72361760-72361779 Msa0183420:intron 30.0%
! AATCAGGATTTTCAATTTCC+CGG + chr1_4:72361776-72361795 Msa0183420:intron 30.0%
TAGTAGAATATCTAATCACC+GGG - chr1_4:72361797-72361816 None:intergenic 30.0%
ATAATACTTACAATCAGCGA+AGG + chr1_4:72361846-72361865 Msa0183420:intron 30.0%
CAATTTCCACCATTTCAAAA+AGG - chr1_4:72361908-72361927 None:intergenic 30.0%
!!! CTTTTTGAAATGGTGGAAAT+TGG + chr1_4:72361906-72361925 Msa0183420:intron 30.0%
! TTGGTATAGGATTTTGCTTT+AGG + chr1_4:72361925-72361944 Msa0183420:intron 30.0%
! AGATCTAATCCTTACTGATT+GGG - chr1_4:72361995-72362014 None:intergenic 30.0%
AGTGTGAACTAGTATTACTA+AGG + chr1_4:72362040-72362059 Msa0183420:intron 30.0%
TAGTATTACTAAGGAAAAGG+AGG + chr1_4:72362049-72362068 Msa0183420:intron 30.0%
AGTATTACTAAGGAAAAGGA+GGG + chr1_4:72362050-72362069 Msa0183420:intron 30.0%
GAGTGAATATATGATCCTTA+AGG + chr1_4:72362169-72362188 Msa0183420:intron 30.0%
TGAATATATGATCCTTAAGG+TGG + chr1_4:72362172-72362191 Msa0183420:intron 30.0%
TATTCTATAACTCCACCTTA+AGG - chr1_4:72362187-72362206 None:intergenic 30.0%
!! TTTATTTTCTTTTGAGTGGG+TGG + chr1_4:72362324-72362343 Msa0183420:intron 30.0%
! TTTTCTAAATGTCTGCTGAA+AGG + chr1_4:72362350-72362369 Msa0183420:intron 30.0%
! CTAAAATAGCCCATGAATTT+TGG + chr1_4:72362539-72362558 Msa0183420:intron 30.0%
!! CAATCTATTATTTTGCTGCT+TGG - chr1_4:72362642-72362661 None:intergenic 30.0%
CAAGCAGCAAAATAATAGAT+TGG + chr1_4:72362640-72362659 Msa0183420:intron 30.0%
AGCAGCAAAATAATAGATTG+GGG + chr1_4:72362642-72362661 Msa0183420:intron 30.0%
! GGGGTTAGTATAAACATATA+TGG + chr1_4:72362661-72362680 Msa0183420:intron 30.0%
AATTTACTTTACTTCCAGGT+TGG + chr1_4:72362748-72362767 Msa0183420:intron 30.0%
TTCCATTTCATCATCATCAA+CGG - chr1_4:72362863-72362882 None:intergenic 30.0%
!!! AGCATAAAGTTACTTTTAGC+AGG + chr1_4:72363000-72363019 Msa0183420:intron 30.0%
!!! TTTTAGGGTAGTCATATCAT+GGG + chr1_4:72363101-72363120 Msa0183420:intron 30.0%
CCAATATAGTAATGGTCTAA+CGG - chr1_4:72363601-72363620 None:intergenic 30.0%
ATTCTAATCTCGAGAAAAGT+AGG + chr1_4:72363651-72363670 Msa0183420:intron 30.0%
TTCTAATCTCGAGAAAAGTA+GGG + chr1_4:72363652-72363671 Msa0183420:intron 30.0%
TCTTGGTTAATATGCATCAA+AGG - chr1_4:72363728-72363747 None:intergenic 30.0%
ATACTACAAAATAACCTTCC+TGG + chr1_4:72364040-72364059 Msa0183420:CDS 30.0%
!! CAATGTTAACATTTTGACAG+AGG + chr1_4:72364132-72364151 Msa0183420:intron 30.0%
ACGAGTTTATGAAGATAGAA+TGG + chr1_4:72364165-72364184 Msa0183420:CDS 30.0%
TTGTGAGAGCAGTTATTATA+GGG + chr1_4:72364191-72364210 Msa0183420:CDS 30.0%
GTTGATGTAGCTTCAAAATA+AGG - chr1_4:72364301-72364320 None:intergenic 30.0%
!! AAGTTCTAGTTTCACTACAA+GGG + chr1_4:72364557-72364576 Msa0183420:CDS 30.0%
TTACACCATTAAAAAAGGGT+TGG + chr1_4:72364867-72364886 Msa0183420:intron 30.0%
ATTAGAATGCAAATATGGGA+TGG - chr1_4:72365065-72365084 None:intergenic 30.0%
AAAATCCTAGAGAATACATC+AGG - chr1_4:72365180-72365199 None:intergenic 30.0%
! TGCTCATCAAAGAACATTTT+AGG + chr1_4:72365204-72365223 Msa0183420:CDS 30.0%
! TCATCAAAGAACATTTTAGG+AGG + chr1_4:72365207-72365226 Msa0183420:CDS 30.0%
AAAAAGACCAATTCACTTCT+AGG + chr1_4:72365551-72365570 Msa0183420:intron 30.0%
GGAAAGAAGGAAAACAAAAT+TGG - chr1_4:72365854-72365873 None:intergenic 30.0%
CCCTAAATTACAAAGCAACA+AGG + chr1_4:72358770-72358789 Msa0183420:five_prime_UTR 35.0%
!! TAGTGTATTTGTTGTTGCAG+CGG - chr1_4:72358818-72358837 None:intergenic 35.0%
AGAAGAAGAAGAATATGCGA+AGG - chr1_4:72358845-72358864 None:intergenic 35.0%
AAGCTTACGAAGAAAGAAGA+AGG - chr1_4:72358928-72358947 None:intergenic 35.0%
!!! GCTAGTTTTTGAGGTTGAAT+CGG - chr1_4:72359075-72359094 None:intergenic 35.0%
! ACACGGATTAAGATAACCTA+AGG - chr1_4:72359145-72359164 None:intergenic 35.0%
AAGCGTTATAGTTCAATGAG+AGG - chr1_4:72359221-72359240 None:intergenic 35.0%
! ACATTCTGAAAACAAAGAGC+CGG + chr1_4:72359644-72359663 Msa0183420:CDS 35.0%
TTCTTACAAGAAACTCCATC+AGG - chr1_4:72359690-72359709 None:intergenic 35.0%
CAAGAATAAAAACACTGGGA+TGG + chr1_4:72359746-72359765 Msa0183420:CDS 35.0%
AATAAAAACACTGGGATGGT+TGG + chr1_4:72359750-72359769 Msa0183420:CDS 35.0%
ATAAAAACACTGGGATGGTT+GGG + chr1_4:72359751-72359770 Msa0183420:CDS 35.0%
ATGGTTGCAGAAATTCTGAT+AGG + chr1_4:72359895-72359914 Msa0183420:CDS 35.0%
TACATCACTGAAATTCTGTG+TGG - chr1_4:72360000-72360019 None:intergenic 35.0%
! GGTTGATGTCAATATATCTG+TGG + chr1_4:72360097-72360116 Msa0183420:CDS 35.0%
TAAAGACTTGAAGCGTATCA+GGG + chr1_4:72360163-72360182 Msa0183420:CDS 35.0%
!! GTGACTGTCTTATTTGATGA+TGG + chr1_4:72360254-72360273 Msa0183420:CDS 35.0%
CTTGAAGATTGATGAAGACT+TGG - chr1_4:72360390-72360409 None:intergenic 35.0%
GTCTTCATCAATCTTCAAGA+TGG + chr1_4:72360391-72360410 Msa0183420:CDS 35.0%
TTGGATCCGTGTTTGTTTAT+TGG + chr1_4:72360477-72360496 Msa0183420:CDS 35.0%
!!! CTTGTTTTGCTCATGCAAAT+TGG + chr1_4:72360579-72360598 Msa0183420:CDS 35.0%
GATTCTAATCAAACAGGAAG+CGG + chr1_4:72360710-72360729 Msa0183420:CDS 35.0%
ATTCTAATCAAACAGGAAGC+GGG + chr1_4:72360711-72360730 Msa0183420:CDS 35.0%
CTACAGTTGAGGAATCAAAT+GGG + chr1_4:72360750-72360769 Msa0183420:CDS 35.0%
CATGAACTAGATTCACATGA+AGG - chr1_4:72360845-72360864 None:intergenic 35.0%
! TCATGTGAATCTAGTTCATG+TGG + chr1_4:72360845-72360864 Msa0183420:CDS 35.0%
!!! CTTATTTTTTTGCGGTGAAG+AGG - chr1_4:72360914-72360933 None:intergenic 35.0%
CTCTTCACCGCAAAAAAATA+AGG + chr1_4:72360912-72360931 Msa0183420:CDS 35.0%
CTCTTCAAATTGTGAACACT+AGG + chr1_4:72360993-72361012 Msa0183420:CDS 35.0%
GAAACAAATTCATGATCACC+AGG - chr1_4:72361097-72361116 None:intergenic 35.0%
AGCAATACTCATAATCTGGA+TGG - chr1_4:72361312-72361331 None:intergenic 35.0%
CCATAGCAATACTCATAATC+TGG - chr1_4:72361316-72361335 None:intergenic 35.0%
! CCAGATTATGAGTATTGCTA+TGG + chr1_4:72361313-72361332 Msa0183420:CDS 35.0%
AAGCAGGAAAACGAAGAAAA+TGG + chr1_4:72361409-72361428 Msa0183420:CDS 35.0%
!! AGAAGATGCTGTTTCTGTTT+GGG - chr1_4:72361455-72361474 None:intergenic 35.0%
TTATATTTCCAACCCAAGAG+AGG - chr1_4:72361504-72361523 None:intergenic 35.0%
!! TCTTGGGTTGGAAATATAAC+TGG + chr1_4:72361505-72361524 Msa0183420:CDS 35.0%
!! TCAGGAAGACCTTTTTGAAA+TGG + chr1_4:72361896-72361915 Msa0183420:intron 35.0%
! GAAATGGTGGAAATTGGTAT+AGG + chr1_4:72361912-72361931 Msa0183420:intron 35.0%
!!! TTTTGCTTTAGGATGCTTGT+TGG + chr1_4:72361936-72361955 Msa0183420:intron 35.0%
!! TTTGCTTTAGGATGCTTGTT+GGG + chr1_4:72361937-72361956 Msa0183420:intron 35.0%
CAGATCTAATCCTTACTGAT+TGG - chr1_4:72361996-72362015 None:intergenic 35.0%
!! ATCTGCGTACATTAGTTTGT+AGG + chr1_4:72362081-72362100 Msa0183420:intron 35.0%
TTAGTAACCTCAGTAGCAAA+AGG - chr1_4:72362483-72362502 None:intergenic 35.0%
! TAGCATGTTGAACAGTCTTT+TGG + chr1_4:72362514-72362533 Msa0183420:intron 35.0%
!! AACCGTTGATGATGATGAAA+TGG + chr1_4:72362858-72362877 Msa0183420:CDS 35.0%
!! AACTTTATGCTGAAAGTACC+AGG - chr1_4:72362991-72363010 None:intergenic 35.0%
!!! GTTTTAGGGTAGTCATATCA+TGG + chr1_4:72363100-72363119 Msa0183420:intron 35.0%
CTATAACCAACATCTCTAGT+TGG - chr1_4:72363127-72363146 None:intergenic 35.0%
ATTACATGCAGGTCGTTAAT+AGG + chr1_4:72363179-72363198 Msa0183420:intron 35.0%
TTACATGCAGGTCGTTAATA+GGG + chr1_4:72363180-72363199 Msa0183420:intron 35.0%
CAGAAATGTATTGCCATTGA+TGG + chr1_4:72363412-72363431 Msa0183420:CDS 35.0%
TAGCCAGAGTTGTAAAAATG+AGG + chr1_4:72363447-72363466 Msa0183420:CDS 35.0%
!! ACTCCTCATTTTTACAACTC+TGG - chr1_4:72363453-72363472 None:intergenic 35.0%
TCCAGAAAGTTCAGAAAATG+TGG + chr1_4:72363480-72363499 Msa0183420:CDS 35.0%
! TCCACATTTTCTGAACTTTC+TGG - chr1_4:72363484-72363503 None:intergenic 35.0%
CCGTTAGACCATTACTATAT+TGG + chr1_4:72363598-72363617 Msa0183420:CDS 35.0%
CAGTTGCACCAATATAGTAA+TGG - chr1_4:72363609-72363628 None:intergenic 35.0%
CATTACTATATTGGTGCAAC+TGG + chr1_4:72363607-72363626 Msa0183420:CDS 35.0%
TGCATATTAACCAAGACACA+TGG + chr1_4:72363732-72363751 Msa0183420:intron 35.0%
GCATATTAACCAAGACACAT+GGG + chr1_4:72363733-72363752 Msa0183420:intron 35.0%
! TTTGTTATATCACATGGGGT+TGG + chr1_4:72363940-72363959 Msa0183420:intron 35.0%
TTCAGAGTAACAACCGAAAA+TGG + chr1_4:72363990-72364009 Msa0183420:intron 35.0%
CAACCGAAAATGGTATAAGA+AGG + chr1_4:72364000-72364019 Msa0183420:CDS 35.0%
! GCACCTTCTTATACCATTTT+CGG - chr1_4:72364006-72364025 None:intergenic 35.0%
! ATAAGAAGGTGCAACAAGAT+TGG + chr1_4:72364014-72364033 Msa0183420:CDS 35.0%
! TAAGAAGGTGCAACAAGATT+GGG + chr1_4:72364015-72364034 Msa0183420:CDS 35.0%
CTTGTGAGAGCAGTTATTAT+AGG + chr1_4:72364190-72364209 Msa0183420:CDS 35.0%
CAGTTATTATAGGGCCATTT+GGG + chr1_4:72364200-72364219 Msa0183420:CDS 35.0%
! AACCCTAATTTGTATGAGGA+AGG + chr1_4:72364454-72364473 Msa0183420:CDS 35.0%
! ACCCTAATTTGTATGAGGAA+GGG + chr1_4:72364455-72364474 Msa0183420:CDS 35.0%
TCCCTTCCTCATACAAATTA+GGG - chr1_4:72364459-72364478 None:intergenic 35.0%
TTCCCTTCCTCATACAAATT+AGG - chr1_4:72364460-72364479 None:intergenic 35.0%
! TAATTTGTATGAGGAAGGGA+AGG + chr1_4:72364459-72364478 Msa0183420:CDS 35.0%
! TGAAGGATGCTAGAAGATTT+TGG - chr1_4:72364538-72364557 None:intergenic 35.0%
GTAGTGAAACTAGAACTTGA+AGG - chr1_4:72364555-72364574 None:intergenic 35.0%
!! CAAGTTCTAGTTTCACTACA+AGG + chr1_4:72364556-72364575 Msa0183420:CDS 35.0%
TATCCAGCTTCATTGAAGTA+AGG - chr1_4:72364601-72364620 None:intergenic 35.0%
AGACCATGATGTATCTTATG+CGG + chr1_4:72364698-72364717 Msa0183420:CDS 35.0%
TATTGCATACTTCGTTTCAC+TGG + chr1_4:72364807-72364826 Msa0183420:intron 35.0%
!! ATTAAAAAAGGGTTGGTGCA+GGG + chr1_4:72364874-72364893 Msa0183420:intron 35.0%
ATCTTCCTGATGTATTCTCT+AGG + chr1_4:72365172-72365191 Msa0183420:intron 35.0%
GCTTGTGATGCATATATGAA+GGG + chr1_4:72365251-72365270 Msa0183420:CDS 35.0%
TATATGAAGGGCTACTTGAT+TGG + chr1_4:72365263-72365282 Msa0183420:CDS 35.0%
AAACCAACAGAGGTTGAATT+TGG - chr1_4:72365329-72365348 None:intergenic 35.0%
!! TGTTGGTTTCAAGTTGATGT+TGG + chr1_4:72365340-72365359 Msa0183420:CDS 35.0%
TTAGTGTTTGCTTCACTCAA+AGG - chr1_4:72365607-72365626 None:intergenic 35.0%
TACATGTGACCATACTCAAA+GGG - chr1_4:72365647-72365666 None:intergenic 35.0%
CAAAAGTCGTTGTTAATGGT+CGG + chr1_4:72365764-72365783 Msa0183420:three_prime_UTR 35.0%
! TTGAGGTTGAATCGGTGTTT+CGG - chr1_4:72359067-72359086 None:intergenic 40.0%
!!! GAGGAATGAGCTAGTTTTTG+AGG - chr1_4:72359084-72359103 None:intergenic 40.0%
ACAAGAAACTCCATCAGGTT+CGG - chr1_4:72359685-72359704 None:intergenic 40.0%
GGGATTGTGACAGAAGTTAA+TGG + chr1_4:72359771-72359790 Msa0183420:CDS 40.0%
TCAGATTCCGATTCAGATAG+TGG + chr1_4:72359816-72359835 Msa0183420:CDS 40.0%
AGTGACTCCACTATCTGAAT+CGG - chr1_4:72359826-72359845 None:intergenic 40.0%
GATGTAGAAGTTGTTGATCG+TGG + chr1_4:72360014-72360033 Msa0183420:CDS 40.0%
CTAAAGACTTGAAGCGTATC+AGG + chr1_4:72360162-72360181 Msa0183420:CDS 40.0%
CAATCTTCAAGATGGCTAGA+TGG + chr1_4:72360399-72360418 Msa0183420:CDS 40.0%
TGGAAAGCAAGTAGGTTAGA+AGG + chr1_4:72360434-72360453 Msa0183420:CDS 40.0%
ACTGTCACCAATGTTACAGT+TGG + chr1_4:72360458-72360477 Msa0183420:CDS 40.0%
GTTTATTGGATAGCATCTGC+AGG + chr1_4:72360491-72360510 Msa0183420:CDS 40.0%
TGCTCATGCAAATTGGCAAT+TGG + chr1_4:72360586-72360605 Msa0183420:CDS 40.0%
GCTCATGCAAATTGGCAATT+GGG + chr1_4:72360587-72360606 Msa0183420:CDS 40.0%
GCTACAGTTGAGGAATCAAA+TGG + chr1_4:72360749-72360768 Msa0183420:CDS 40.0%
AAAGCTTTCCTCTTTCTTCC+GGG - chr1_4:72360966-72360985 None:intergenic 40.0%
CAAAGCTTTCCTCTTTCTTC+CGG - chr1_4:72360967-72360986 None:intergenic 40.0%
!! TGATCACCAGGAGTATCAAT+AGG - chr1_4:72361085-72361104 None:intergenic 40.0%
ATTATCCTCACCATCATCAG+AGG - chr1_4:72361143-72361162 None:intergenic 40.0%
TTTCCTCGTTGTCGAATTCT+CGG - chr1_4:72361264-72361283 None:intergenic 40.0%
TGTAAGTGTCTATGAGCTAG+AGG + chr1_4:72361285-72361304 Msa0183420:CDS 40.0%
GTAAGTGTCTATGAGCTAGA+GGG + chr1_4:72361286-72361305 Msa0183420:CDS 40.0%
AGCATCTAAACAGACAGACA+CGG - chr1_4:72361362-72361381 None:intergenic 40.0%
GTCTGTTTAGATGCTTCTGT+TGG + chr1_4:72361367-72361386 Msa0183420:CDS 40.0%
!! CAGAAGATGCTGTTTCTGTT+TGG - chr1_4:72361456-72361475 None:intergenic 40.0%
CAAACAGAAACAGCATCTTC+TGG + chr1_4:72361454-72361473 Msa0183420:CDS 40.0%
! ATTGAAGTTACATGGGCTGA+TGG + chr1_4:72361544-72361563 Msa0183420:CDS 40.0%
! TTGAAGTTACATGGGCTGAT+GGG + chr1_4:72361545-72361564 Msa0183420:CDS 40.0%
!! TCTGGTTGTGTTGTTTCTGT+CGG + chr1_4:72361707-72361726 Msa0183420:intron 40.0%
GAATCACTCTTCACAGAAAC+TGG - chr1_4:72361878-72361897 None:intergenic 40.0%
GTTTCTGTGAAGAGTGATTC+AGG + chr1_4:72361878-72361897 Msa0183420:intron 40.0%
!!! GGAAGACCTTTTTGAAATGG+TGG + chr1_4:72361899-72361918 Msa0183420:intron 40.0%
! TCTAATCCTTACTGATTGGG+AGG - chr1_4:72361992-72362011 None:intergenic 40.0%
TAGGCTTAACTCAACTCCAA+AGG - chr1_4:72362136-72362155 None:intergenic 40.0%
TCACTCAGAAATTGGGGTTT+AGG - chr1_4:72362155-72362174 None:intergenic 40.0%
ACTGTTCAACATGCTAGCAT+AGG - chr1_4:72362510-72362529 None:intergenic 40.0%
! CCTCATTTGAAGCTGTGAAT+TGG - chr1_4:72362578-72362597 None:intergenic 40.0%
CCAATTCACAGCTTCAAATG+AGG + chr1_4:72362575-72362594 Msa0183420:intron 40.0%
ACCAACCACATAGATTGCTT+GGG - chr1_4:72362776-72362795 None:intergenic 40.0%
TACCAACCACATAGATTGCT+TGG - chr1_4:72362777-72362796 None:intergenic 40.0%
TGATGAAATGGAAGTCCAAG+AGG + chr1_4:72362870-72362889 Msa0183420:CDS 40.0%
GAAAGAGAAACAAACCTCTC+TGG - chr1_4:72362899-72362918 None:intergenic 40.0%
TAAACTTGCCTCTTTCTCAG+AGG + chr1_4:72362943-72362962 Msa0183420:intron 40.0%
CAAATCCATTTATCGAAGGG+AGG - chr1_4:72363081-72363100 None:intergenic 40.0%
AGCAATGTTGCAGAAGAGAA+TGG + chr1_4:72363211-72363230 Msa0183420:CDS 40.0%
CAAATCGAATTGCTGCAAGT+GGG - chr1_4:72363273-72363292 None:intergenic 40.0%
ACAAATCGAATTGCTGCAAG+TGG - chr1_4:72363274-72363293 None:intergenic 40.0%
!!! CTGGACTCGCATATTTTAAC+TGG - chr1_4:72363388-72363407 None:intergenic 40.0%
! GGCAATACATTTCTGAGAAC+TGG - chr1_4:72363407-72363426 None:intergenic 40.0%
!! TGCCATTGATGGTGACAATT+TGG + chr1_4:72363423-72363442 Msa0183420:CDS 40.0%
!! GCCATTGATGGTGACAATTT+GGG + chr1_4:72363424-72363443 Msa0183420:CDS 40.0%
ACCCAAATTGTCACCATCAA+TGG - chr1_4:72363428-72363447 None:intergenic 40.0%
!! AAAATGTGGAAGCATCTGAG+AGG + chr1_4:72363494-72363513 Msa0183420:CDS 40.0%
! TTCGGTTGTTACTCTGAAAG+TGG - chr1_4:72363988-72364007 None:intergenic 40.0%
! AAGAAGGTGCAACAAGATTG+GGG + chr1_4:72364016-72364035 Msa0183420:CDS 40.0%
GCAGTTATTATAGGGCCATT+TGG + chr1_4:72364199-72364218 Msa0183420:CDS 40.0%
AAAAACAGCCCATCTTGGTA+AGG - chr1_4:72364229-72364248 None:intergenic 40.0%
CAAAGAAAAACAGCCCATCT+TGG - chr1_4:72364234-72364253 None:intergenic 40.0%
AGATTATCCTGATGTTCCAC+CGG + chr1_4:72364270-72364289 Msa0183420:CDS 40.0%
GCTTCAAAATAAGGCCTTAC+CGG - chr1_4:72364292-72364311 None:intergenic 40.0%
AGACATGAGATGCATTCATG+TGG - chr1_4:72364366-72364385 None:intergenic 40.0%
TCTTCCTGTGTTCTTTGTTG+TGG + chr1_4:72364383-72364402 Msa0183420:intron 40.0%
! TTCTTTGTTGTGGCCTCAAA+TGG + chr1_4:72364393-72364412 Msa0183420:intron 40.0%
GCAGTCAGCATACTATCATT+CGG + chr1_4:72364417-72364436 Msa0183420:intron 40.0%
CAGTCAGCATACTATCATTC+GGG + chr1_4:72364418-72364437 Msa0183420:intron 40.0%
TCCATGTGTTTAGAAGGCTA+AGG - chr1_4:72364489-72364508 None:intergenic 40.0%
AGCTTCATTGAAGTAAGGCT+TGG - chr1_4:72364596-72364615 None:intergenic 40.0%
AAGCCTTACTTCAATGAAGC+TGG + chr1_4:72364595-72364614 Msa0183420:CDS 40.0%
CTTCCGCATAAGATACATCA+TGG - chr1_4:72364704-72364723 None:intergenic 40.0%
CATTCACAATCACCAACCTT+GGG - chr1_4:72364730-72364749 None:intergenic 40.0%
TCATTCACAATCACCAACCT+TGG - chr1_4:72364731-72364750 None:intergenic 40.0%
!!! CTGCACCAACCCTTTTTTAA+TGG - chr1_4:72364875-72364894 None:intergenic 40.0%
!! CATTAAAAAAGGGTTGGTGC+AGG + chr1_4:72364873-72364892 Msa0183420:intron 40.0%
GAAGGAACACGTAGTAAACA+AGG + chr1_4:72364974-72364993 Msa0183420:intron 40.0%
GACTTCATGACACTTGCTTT+GGG - chr1_4:72365029-72365048 None:intergenic 40.0%
AGACTTCATGACACTTGCTT+TGG - chr1_4:72365030-72365049 None:intergenic 40.0%
!! AAAGAACATTTTAGGAGGCG+TGG + chr1_4:72365212-72365231 Msa0183420:CDS 40.0%
GCGTGGTCATTACATTCTTA+AGG + chr1_4:72365229-72365248 Msa0183420:CDS 40.0%
GGCTTGTGATGCATATATGA+AGG + chr1_4:72365250-72365269 Msa0183420:CDS 40.0%
AGTCCAAATTCAACCTCTGT+TGG + chr1_4:72365323-72365342 Msa0183420:CDS 40.0%
CATCAACTTGAAACCAACAG+AGG - chr1_4:72365339-72365358 None:intergenic 40.0%
! GAAAAGCTTTGGCACTATCT+TGG - chr1_4:72365366-72365385 None:intergenic 40.0%
CTAAGTGACACGAAAAGCTT+TGG - chr1_4:72365377-72365396 None:intergenic 40.0%
!! TTCGTGTCACTTAGTGAAGT+TGG + chr1_4:72365383-72365402 Msa0183420:CDS 40.0%
!! TCGTGTCACTTAGTGAAGTT+GGG + chr1_4:72365384-72365403 Msa0183420:CDS 40.0%
CTTCAAATTGCGAGAGTGAT+TGG - chr1_4:72365463-72365482 None:intergenic 40.0%
CAATCACTCTCGCAATTTGA+AGG + chr1_4:72365461-72365480 Msa0183420:three_prime_UTR 40.0%
TCAAGCTCCTAGAAGTGAAT+TGG - chr1_4:72365561-72365580 None:intergenic 40.0%
! ATTCACTTCTAGGAGCTTGA+AGG + chr1_4:72365561-72365580 Msa0183420:three_prime_UTR 40.0%
GCTGAATATCCCTTTGAGTA+TGG + chr1_4:72365635-72365654 Msa0183420:three_prime_UTR 40.0%
CTACATGTGACCATACTCAA+AGG - chr1_4:72365648-72365667 None:intergenic 40.0%
TTGAGTATGGTCACATGTAG+AGG + chr1_4:72365648-72365667 Msa0183420:three_prime_UTR 40.0%
TGAGTATGGTCACATGTAGA+GGG + chr1_4:72365649-72365668 Msa0183420:three_prime_UTR 40.0%
TTGAATATTTGGACAGAGGG+TGG + chr1_4:72365716-72365735 Msa0183420:three_prime_UTR 40.0%
GAAGCTTATGAGCGTAGAAA+AGG - chr1_4:72365886-72365905 None:intergenic 40.0%
TACGCTCATAAGCTTCTTAC+TGG + chr1_4:72365890-72365909 Msa0183420:three_prime_UTR 40.0%
! CTGGCGTCTTCATATCTTTT+TGG + chr1_4:72365909-72365928 Msa0183420:three_prime_UTR 40.0%
CGAAGAAAGAAGAAGGAGCT+CGG - chr1_4:72358921-72358940 None:intergenic 45.0%
! TCGGCATTAGCATTTTCAGC+CGG - chr1_4:72359666-72359685 None:intergenic 45.0%
AATGCTAATGCCGAACCTGA+TGG + chr1_4:72359672-72359691 Msa0183420:CDS 45.0%
! TAGTGGAGTCACTGATGATG+AGG + chr1_4:72359833-72359852 Msa0183420:CDS 45.0%
! AGTGGAGTCACTGATGATGA+GGG + chr1_4:72359834-72359853 Msa0183420:CDS 45.0%
TCTGAAGAGCAGCAGTCTTA+CGG - chr1_4:72359938-72359957 None:intergenic 45.0%
TTTCACTGCTGGAGATTACG+TGG + chr1_4:72360187-72360206 Msa0183420:CDS 45.0%
AAGATCCATCGGATCTGCTT+TGG - chr1_4:72360297-72360316 None:intergenic 45.0%
GGCATTTCCCTTATTACCCA+GGG + chr1_4:72360351-72360370 Msa0183420:CDS 45.0%
AAGATGGCTAGATGGTTGTC+TGG + chr1_4:72360407-72360426 Msa0183420:CDS 45.0%
CACGGATCCAACTGTAACAT+TGG - chr1_4:72360468-72360487 None:intergenic 45.0%
CAAATTGGCAATTGGGTGAC+CGG + chr1_4:72360594-72360613 Msa0183420:CDS 45.0%
CAGATGAGTGCAAAAGACAC+CGG - chr1_4:72360616-72360635 None:intergenic 45.0%
TTCAGAAGACGCTACAGTTG+AGG + chr1_4:72360739-72360758 Msa0183420:CDS 45.0%
TACTATGGACCTTGATCCAG+TGG + chr1_4:72360781-72360800 Msa0183420:CDS 45.0%
ACTATGGACCTTGATCCAGT+GGG + chr1_4:72360782-72360801 Msa0183420:CDS 45.0%
TCAGGAAAGAAAAGAGAGCC+CGG + chr1_4:72360945-72360964 Msa0183420:CDS 45.0%
!! GGACAAGAGTTGATGTTGCT+TGG + chr1_4:72361014-72361033 Msa0183420:CDS 45.0%
!! AAGAGTTGATGTTGCTTGGC+AGG + chr1_4:72361018-72361037 Msa0183420:CDS 45.0%
GTAGAGAAGACCTCTGATGA+TGG + chr1_4:72361130-72361149 Msa0183420:CDS 45.0%
AATTGTGAAACCAGCCGAGT+TGG + chr1_4:72361160-72361179 Msa0183420:CDS 45.0%
ATTGTGAAACCAGCCGAGTT+GGG + chr1_4:72361161-72361180 Msa0183420:CDS 45.0%
TTCCTCGTTGTCGAATTCTC+GGG - chr1_4:72361263-72361282 None:intergenic 45.0%
GCATCTAAACAGACAGACAC+GGG - chr1_4:72361361-72361380 None:intergenic 45.0%
GTCTACTGAGAAATCGAAGC+AGG + chr1_4:72361393-72361412 Msa0183420:CDS 45.0%
ATCTTCTGGCGAAACTGATG+TGG + chr1_4:72361468-72361487 Msa0183420:CDS 45.0%
CACTCTTCACAGAAACTGGA+AGG - chr1_4:72361874-72361893 None:intergenic 45.0%
!! CTTGTTGGGCTGGTAAAATC+TGG + chr1_4:72361951-72361970 Msa0183420:intron 45.0%
ATTGGGAGGACTCTATAAGC+TGG - chr1_4:72361978-72361997 None:intergenic 45.0%
TAGAGTCCTCCCAATCAGTA+AGG + chr1_4:72361983-72362002 Msa0183420:intron 45.0%
! AAAGGCTAGCTCAAGAGATG+GGG - chr1_4:72362118-72362137 None:intergenic 45.0%
! CAAAGGCTAGCTCAAGAGAT+GGG - chr1_4:72362119-72362138 None:intergenic 45.0%
ACCTCAGTAGCAAAAGGAAC+AGG - chr1_4:72362477-72362496 None:intergenic 45.0%
CCAACCACATAGATTGCTTG+GGG - chr1_4:72362775-72362794 None:intergenic 45.0%
ATGCTGAATCACTTGCAGCA+GGG + chr1_4:72362806-72362825 Msa0183420:CDS 45.0%
ATATAAGCGATGCTGCAACC+TGG + chr1_4:72362833-72362852 Msa0183420:CDS 45.0%
TATAAGCGATGCTGCAACCT+GGG + chr1_4:72362834-72362853 Msa0183420:CDS 45.0%
ATCATCATCAACGGTTTCCC+AGG - chr1_4:72362854-72362873 None:intergenic 45.0%
!! AAACCTCTCTGGAATCCTCT+TGG - chr1_4:72362888-72362907 None:intergenic 45.0%
! TTAGGCTTCCTCTGAGAAAG+AGG - chr1_4:72362954-72362973 None:intergenic 45.0%
TCTTTCTCAGAGGAAGCCTA+AGG + chr1_4:72362953-72362972 Msa0183420:intron 45.0%
CTTTCTCAGAGGAAGCCTAA+GGG + chr1_4:72362954-72362973 Msa0183420:intron 45.0%
! CAGGTGACAGATTTTCCCTT+AGG - chr1_4:72362972-72362991 None:intergenic 45.0%
CTAAGGGAAAATCTGTCACC+TGG + chr1_4:72362970-72362989 Msa0183420:intron 45.0%
CAGTTCCTCCCTTCGATAAA+TGG + chr1_4:72363073-72363092 Msa0183420:intron 45.0%
GAGAATGGAGAGAAAGACTC+TGG + chr1_4:72363226-72363245 Msa0183420:CDS 45.0%
ATGGAGAGAAAGACTCTGGT+AGG + chr1_4:72363230-72363249 Msa0183420:CDS 45.0%
TTTGTAACCAGACTTGCGTC+TGG + chr1_4:72363289-72363308 Msa0183420:CDS 45.0%
GAATATTCCAGACGCAAGTC+TGG - chr1_4:72363299-72363318 None:intergenic 45.0%
! TTGCGTCTGGAATATTCTCC+AGG + chr1_4:72363302-72363321 Msa0183420:CDS 45.0%
! TGCGTCTGGAATATTCTCCA+GGG + chr1_4:72363303-72363322 Msa0183420:CDS 45.0%
GCATCATTGTCACAACTAGC+AGG - chr1_4:72363544-72363563 None:intergenic 45.0%
CTATATTGGTGCAACTGGAC+AGG + chr1_4:72363612-72363631 Msa0183420:CDS 45.0%
GTTATATCACATGGGGTTGG+AGG + chr1_4:72363943-72363962 Msa0183420:intron 45.0%
TCTTGGTAAGGAGTCCCAAA+TGG - chr1_4:72364217-72364236 None:intergenic 45.0%
! TTTGGGACTCCTTACCAAGA+TGG + chr1_4:72364217-72364236 Msa0183420:CDS 45.0%
TTGGGACTCCTTACCAAGAT+GGG + chr1_4:72364218-72364237 Msa0183420:CDS 45.0%
GGAACATCAGGATAATCTGG+CGG - chr1_4:72364268-72364287 None:intergenic 45.0%
GGTGGAACATCAGGATAATC+TGG - chr1_4:72364271-72364290 None:intergenic 45.0%
TCAAAATAAGGCCTTACCGG+TGG - chr1_4:72364289-72364308 None:intergenic 45.0%
! TATGCTGACTGCACCATTTG+AGG - chr1_4:72364409-72364428 None:intergenic 45.0%
TCAGCATACTATCATTCGGG+TGG + chr1_4:72364421-72364440 Msa0183420:CDS 45.0%
CATACTATCATTCGGGTGGT+TGG + chr1_4:72364425-72364444 Msa0183420:CDS 45.0%
! GCCTTAGCCTTCTAAACACA+TGG + chr1_4:72364485-72364504 Msa0183420:CDS 45.0%
AGCCTTCTAAACACATGGAC+AGG + chr1_4:72364490-72364509 Msa0183420:CDS 45.0%
TGCCTGTCCATGTGTTTAGA+AGG - chr1_4:72364495-72364514 None:intergenic 45.0%
AGGCAGAGGCAATGAAGTAT+GGG + chr1_4:72364510-72364529 Msa0183420:CDS 45.0%
GCTGGATATGATAAGCAGAC+TGG + chr1_4:72364613-72364632 Msa0183420:CDS 45.0%
!! TGACACTTGCTTTGGGAGAA+TGG - chr1_4:72365022-72365041 None:intergenic 45.0%
ACTGCTATTGTCACTCACAG+AGG - chr1_4:72365306-72365325 None:intergenic 45.0%
!! CGTGTCACTTAGTGAAGTTG+GGG + chr1_4:72365385-72365404 Msa0183420:CDS 45.0%
GGAGCTTGAAGGAACAGAAT+TGG + chr1_4:72365572-72365591 Msa0183420:three_prime_UTR 45.0%
GAAGCAAACACTAACAGAGC+AGG + chr1_4:72365613-72365632 Msa0183420:three_prime_UTR 45.0%
TATTTGGACAGAGGGTGGAA+AGG + chr1_4:72365721-72365740 Msa0183420:three_prime_UTR 45.0%
ATTTGGACAGAGGGTGGAAA+GGG + chr1_4:72365722-72365741 Msa0183420:three_prime_UTR 45.0%
GTTAATGGTCGGTCTTGCAA+TGG + chr1_4:72365775-72365794 Msa0183420:three_prime_UTR 45.0%
!! GGTTTGTTAACTCGTGTGTG+AGG + chr1_4:72365796-72365815 Msa0183420:three_prime_UTR 45.0%
! AGCGTAGAAAAGGAGTGCAA+GGG - chr1_4:72365876-72365895 None:intergenic 45.0%
!! GTGTTGCTTATGAGACTTGG+AGG - chr1_4:72365954-72365973 None:intergenic 45.0%
!! CGTGTGTTGCTTATGAGACT+TGG - chr1_4:72365957-72365976 None:intergenic 45.0%
!! AAAAAAAAAATCAATAAATT+GGG - chr1_4:72359416-72359435 None:intergenic 5.0%
!! AAAAAAAAAAATCAATAAAT+TGG - chr1_4:72359417-72359436 None:intergenic 5.0%
!! TTTGTTGTTGCAGCGGCGTA+GGG - chr1_4:72358811-72358830 None:intergenic 50.0%
!! ATTTGTTGTTGCAGCGGCGT+AGG - chr1_4:72358812-72358831 None:intergenic 50.0%
! AGTCACTGATGATGAGGGTG+AGG + chr1_4:72359839-72359858 Msa0183420:CDS 50.0%
! ACTGATGATGAGGGTGAGGA+GGG + chr1_4:72359843-72359862 Msa0183420:CDS 50.0%
CTAACGAGCTACGTGTACTC+TGG + chr1_4:72359958-72359977 Msa0183420:CDS 50.0%
!! GTGGATTTGTTGGCCCATGA+TGG + chr1_4:72360116-72360135 Msa0183420:CDS 50.0%
CGTATCAGGGATTTCACTGC+TGG + chr1_4:72360176-72360195 Msa0183420:CDS 50.0%
AGTCTCCAAAGCAGATCCGA+TGG + chr1_4:72360289-72360308 Msa0183420:CDS 50.0%
GGGCATTTCCCTTATTACCC+AGG + chr1_4:72360350-72360369 Msa0183420:CDS 50.0%
TCCCTTATTACCCAGGGCAA+CGG + chr1_4:72360357-72360376 Msa0183420:CDS 50.0%
! CTAGATGGTTGTCTGGCTTG+TGG + chr1_4:72360414-72360433 Msa0183420:CDS 50.0%
! CTGGCTTGTGGAAAGCAAGT+AGG + chr1_4:72360426-72360445 Msa0183420:CDS 50.0%
TGGATAGCATCTGCAGGTCA+TGG + chr1_4:72360497-72360516 Msa0183420:CDS 50.0%
GGATAGCATCTGCAGGTCAT+GGG + chr1_4:72360498-72360517 Msa0183420:CDS 50.0%
TTGGACTCTGTTCCTCAGCT+GGG - chr1_4:72360541-72360560 None:intergenic 50.0%
TTTGGACTCTGTTCCTCAGC+TGG - chr1_4:72360542-72360561 None:intergenic 50.0%
!! ATCCAGTGGGTGCTTTGGAA+GGG + chr1_4:72360795-72360814 Msa0183420:CDS 50.0%
!! GGTGCTTTGGAAGGGAATGA+TGG + chr1_4:72360803-72360822 Msa0183420:CDS 50.0%
AAAGAGAGCCCGGAAGAAAG+AGG + chr1_4:72360955-72360974 Msa0183420:CDS 50.0%
! GTTGATGTTGCTTGGCAGGA+TGG + chr1_4:72361022-72361041 Msa0183420:CDS 50.0%
CTTGGCAGGATGGAACGATA+GGG + chr1_4:72361032-72361051 Msa0183420:CDS 50.0%
!! GAAGACCTCTGATGATGGTG+AGG + chr1_4:72361135-72361154 Msa0183420:CDS 50.0%
TTGTGAAACCAGCCGAGTTG+GGG + chr1_4:72361162-72361181 Msa0183420:CDS 50.0%
!! GGAGTGTTGATGCCAAAGAG+CGG + chr1_4:72361191-72361210 Msa0183420:CDS 50.0%
GTGGATAAAACCAGCTGCCA+AGG + chr1_4:72361228-72361247 Msa0183420:CDS 50.0%
TTCTCGGGGATCATCAACCT+TGG - chr1_4:72361248-72361267 None:intergenic 50.0%
TCCTCGTTGTCGAATTCTCG+GGG - chr1_4:72361262-72361281 None:intergenic 50.0%
! TGAGTATTGCTATGGGGACG+TGG + chr1_4:72361321-72361340 Msa0183420:CDS 50.0%
TGGAGTTCTCAGACCTCTCT+TGG + chr1_4:72361488-72361507 Msa0183420:CDS 50.0%
GGAGTTCTCAGACCTCTCTT+GGG + chr1_4:72361489-72361508 Msa0183420:CDS 50.0%
TTCTCAGACCTCTCTTGGGT+TGG + chr1_4:72361493-72361512 Msa0183420:CDS 50.0%
! AGTTACATGGGCTGATGGGA+TGG + chr1_4:72361549-72361568 Msa0183420:CDS 50.0%
GGCTGATGGGATGGTATCAA+CGG + chr1_4:72361558-72361577 Msa0183420:CDS 50.0%
!! GGTTGTGTTGTTTCTGTCGG+TGG + chr1_4:72361710-72361729 Msa0183420:intron 50.0%
TTCTGTCGGTGGAAATGCCA+AGG + chr1_4:72361721-72361740 Msa0183420:intron 50.0%
!! CTTTAGGATGCTTGTTGGGC+TGG + chr1_4:72361941-72361960 Msa0183420:intron 50.0%
! CCAAAGGCTAGCTCAAGAGA+TGG - chr1_4:72362120-72362139 None:intergenic 50.0%
!! CCATCTCTTGAGCTAGCCTT+TGG + chr1_4:72362117-72362136 Msa0183420:intron 50.0%
! GCCTGTTCCTTTTGCTACTG+AGG + chr1_4:72362473-72362492 Msa0183420:intron 50.0%
TGGACCCCAAGCAATCTATG+TGG + chr1_4:72362768-72362787 Msa0183420:CDS 50.0%
CCCCAAGCAATCTATGTGGT+TGG + chr1_4:72362772-72362791 Msa0183420:CDS 50.0%
GATGCTGAATCACTTGCAGC+AGG + chr1_4:72362805-72362824 Msa0183420:CDS 50.0%
AGTCCAAGAGGATTCCAGAG+AGG + chr1_4:72362882-72362901 Msa0183420:CDS 50.0%
CATGGGCCAACTAGAGATGT+TGG + chr1_4:72363118-72363137 Msa0183420:intron 50.0%
! GCGTCTGGAATATTCTCCAG+GGG + chr1_4:72363304-72363323 Msa0183420:CDS 50.0%
ATCCAAGTTCTTCTGTCCCC+TGG - chr1_4:72363323-72363342 None:intergenic 50.0%
CCATTTGACTGCACGTGAAC+AGG - chr1_4:72363346-72363365 None:intergenic 50.0%
CCTGTTCACGTGCAGTCAAA+TGG + chr1_4:72363343-72363362 Msa0183420:CDS 50.0%
AAGTGCATGCCCATGTGTCT+TGG - chr1_4:72363745-72363764 None:intergenic 50.0%
TCACTGTTCACTGACCAGGA+AGG - chr1_4:72364057-72364076 None:intergenic 50.0%
ATCGTCACTGTTCACTGACC+AGG - chr1_4:72364061-72364080 None:intergenic 50.0%
CATCAGGATAATCTGGCGGA+AGG - chr1_4:72364264-72364283 None:intergenic 50.0%
ATCCTGATGTTCCACCGGTA+AGG + chr1_4:72364275-72364294 Msa0183420:intron 50.0%
GAGGCCACAACAAAGAACAC+AGG - chr1_4:72364390-72364409 None:intergenic 50.0%
CTAAACACATGGACAGGCAG+AGG + chr1_4:72364496-72364515 Msa0183420:CDS 50.0%
CAGGCAGAGGCAATGAAGTA+TGG + chr1_4:72364509-72364528 Msa0183420:CDS 50.0%
AAGCAGACTGGAACAGCTGA+AGG + chr1_4:72364625-72364644 Msa0183420:CDS 50.0%
TCACAATCACCAACCTTGGG+TGG - chr1_4:72364727-72364746 None:intergenic 50.0%
GTATGGTCACATGTAGAGGG+AGG + chr1_4:72365652-72365671 Msa0183420:three_prime_UTR 50.0%
! AAGGAGTGCAAGGGGAAAGA+AGG - chr1_4:72365867-72365886 None:intergenic 50.0%
! GCGTAGAAAAGGAGTGCAAG+GGG - chr1_4:72365875-72365894 None:intergenic 50.0%
! GAGCGTAGAAAAGGAGTGCA+AGG - chr1_4:72365877-72365896 None:intergenic 50.0%
! TTGTTGTTGCAGCGGCGTAG+GGG - chr1_4:72358810-72358829 None:intergenic 55.0%
! CACTGATGATGAGGGTGAGG+AGG + chr1_4:72359842-72359861 Msa0183420:CDS 55.0%
GAGGAGGGTGATGTTGAGGA+AGG + chr1_4:72359858-72359877 Msa0183420:CDS 55.0%
CGAGCTACGTGTACTCTGGA+TGG + chr1_4:72359962-72359981 Msa0183420:CDS 55.0%
AACCACAACACCCACTTGCC+CGG - chr1_4:72360081-72360100 None:intergenic 55.0%
GCTGGAGATTACGTGGTGCT+CGG + chr1_4:72360194-72360213 Msa0183420:CDS 55.0%
CTGGAGATTACGTGGTGCTC+GGG + chr1_4:72360195-72360214 Msa0183420:CDS 55.0%
ATTACGTGGTGCTCGGGTCT+TGG + chr1_4:72360201-72360220 Msa0183420:CDS 55.0%
CCCGTTGCCCTGGGTAATAA+GGG - chr1_4:72360361-72360380 None:intergenic 55.0%
CCCTTATTACCCAGGGCAAC+GGG + chr1_4:72360358-72360377 Msa0183420:CDS 55.0%
ACCCGTTGCCCTGGGTAATA+AGG - chr1_4:72360362-72360381 None:intergenic 55.0%
ATTACCCAGGGCAACGGGTA+AGG + chr1_4:72360363-72360382 Msa0183420:CDS 55.0%
TTACCCAGGGCAACGGGTAA+GGG + chr1_4:72360364-72360383 Msa0183420:CDS 55.0%
GCTGGGGCAGCAGAAGAATA+TGG - chr1_4:72360524-72360543 None:intergenic 55.0%
TGGACTCTGTTCCTCAGCTG+GGG - chr1_4:72360540-72360559 None:intergenic 55.0%
! CCAAAGCACCCACTGGATCA+AGG - chr1_4:72360793-72360812 None:intergenic 55.0%
CCTTGATCCAGTGGGTGCTT+TGG + chr1_4:72360790-72360809 Msa0183420:CDS 55.0%
! GATCCAGTGGGTGCTTTGGA+AGG + chr1_4:72360794-72360813 Msa0183420:CDS 55.0%
! TTCCCTTCCAAAGCACCCAC+TGG - chr1_4:72360800-72360819 None:intergenic 55.0%
AGGATCCTGTCCGTGAAGCT+TGG + chr1_4:72360888-72360907 Msa0183420:CDS 55.0%
GGTGAAGAGGCCAAGCTTCA+CGG - chr1_4:72360901-72360920 None:intergenic 55.0%
GCTTGGCAGGATGGAACGAT+AGG + chr1_4:72361031-72361050 Msa0183420:CDS 55.0%
CAGGATGGAACGATAGGGTG+TGG + chr1_4:72361037-72361056 Msa0183420:CDS 55.0%
CACACAAGCTGTCCGCTCTT+TGG - chr1_4:72361206-72361225 None:intergenic 55.0%
AAGAGCGGACAGCTTGTGTG+AGG + chr1_4:72361206-72361225 Msa0183420:CDS 55.0%
GGATCATCAACCTTGGCAGC+TGG - chr1_4:72361241-72361260 None:intergenic 55.0%
TCCCCGAGAATTCGACAACG+AGG + chr1_4:72361258-72361277 Msa0183420:CDS 55.0%
AGATTGCTTGGGGTCCAACC+TGG - chr1_4:72362765-72362784 None:intergenic 55.0%
GAAAGACTCTGGTAGGACCG+CGG + chr1_4:72363237-72363256 Msa0183420:CDS 55.0%
!! AAGTGGGACAGAAAGTGCCG+CGG - chr1_4:72363257-72363276 None:intergenic 55.0%
CTCCAGGGGACAGAAGAACT+TGG + chr1_4:72363318-72363337 Msa0183420:CDS 55.0%
TCTTATGCGGAAGCCACCCA+AGG + chr1_4:72364711-72364730 Msa0183420:CDS 55.0%
GGGTGAGGAGGGTGATGTTG+AGG + chr1_4:72359854-72359873 Msa0183420:CDS 60.0%
GCTTCTGCCTCTGACCCTAC+CGG + chr1_4:72360059-72360078 Msa0183420:CDS 60.0%
CTTCTGCCTCTGACCCTACC+GGG + chr1_4:72360060-72360079 Msa0183420:CDS 60.0%
TCTGACCCTACCGGGCAAGT+GGG + chr1_4:72360068-72360087 Msa0183420:CDS 60.0%
CAACACCCACTTGCCCGGTA+GGG - chr1_4:72360076-72360095 None:intergenic 60.0%
ACAACACCCACTTGCCCGGT+AGG - chr1_4:72360077-72360096 None:intergenic 60.0%
! TACCGGGCAAGTGGGTGTTG+TGG + chr1_4:72360076-72360095 Msa0183420:CDS 60.0%
GTGGTGCTCGGGTCTTGGTT+AGG + chr1_4:72360206-72360225 Msa0183420:CDS 60.0%
TTCTTCTGCTGCCCCAGCTG+AGG + chr1_4:72360526-72360545 Msa0183420:CDS 60.0%
AGAGGCCAAGCTTCACGGAC+AGG - chr1_4:72360896-72360915 None:intergenic 60.0%
! TGAAACCAGCCGAGTTGGGG+TGG + chr1_4:72361165-72361184 Msa0183420:CDS 60.0%
CACTCCTCACCACCCCAACT+CGG - chr1_4:72361177-72361196 None:intergenic 60.0%
AGCGGACAGCTTGTGTGAGG+TGG + chr1_4:72361209-72361228 Msa0183420:CDS 60.0%
GGCCTTACCGGTGGAACATC+AGG - chr1_4:72364280-72364299 None:intergenic 60.0%
ATGCGGAAGCCACCCAAGGT+TGG + chr1_4:72364715-72364734 Msa0183420:intron 60.0%
GGACAGAGGGTGGAAAGGGT+TGG + chr1_4:72365726-72365745 Msa0183420:three_prime_UTR 60.0%
CACTTGCCCGGTAGGGTCAG+AGG - chr1_4:72360069-72360088 None:intergenic 65.0%
CTCTGACCCTACCGGGCAAG+TGG + chr1_4:72360067-72360086 Msa0183420:CDS 65.0%
TGGCCCTTACCCGTTGCCCT+GGG - chr1_4:72360370-72360389 None:intergenic 65.0%
TTGGCCCTTACCCGTTGCCC+TGG - chr1_4:72360371-72360390 None:intergenic 65.0%
CCTCACCACCCCAACTCGGC+TGG - chr1_4:72361173-72361192 None:intergenic 70.0%
! CCAGCCGAGTTGGGGTGGTG+AGG + chr1_4:72361170-72361189 Msa0183420:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 72358770 72366004 72358770 ID=Msa0183420;Name=Msa0183420
chr1_4 mRNA 72358770 72366004 72358770 ID=Msa0183420-mRNA-1;Parent=Msa0183420;Name=Msa0183420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=170|1|1|1|0.75|0.66|9|485|1103
chr1_4 exon 72358770 72358939 72358770 ID=Msa0183420-mRNA-1:exon:24396;Parent=Msa0183420-mRNA-1
chr1_4 exon 72359621 72361579 72359621 ID=Msa0183420-mRNA-1:exon:24397;Parent=Msa0183420-mRNA-1
chr1_4 exon 72362766 72362903 72362766 ID=Msa0183420-mRNA-1:exon:24398;Parent=Msa0183420-mRNA-1
chr1_4 exon 72363190 72363633 72363190 ID=Msa0183420-mRNA-1:exon:24399;Parent=Msa0183420-mRNA-1
chr1_4 exon 72363995 72364061 72363995 ID=Msa0183420-mRNA-1:exon:24400;Parent=Msa0183420-mRNA-1
chr1_4 exon 72364152 72364291 72364152 ID=Msa0183420-mRNA-1:exon:24401;Parent=Msa0183420-mRNA-1
chr1_4 exon 72364421 72364732 72364421 ID=Msa0183420-mRNA-1:exon:24402;Parent=Msa0183420-mRNA-1
chr1_4 exon 72365194 72365482 72365194 ID=Msa0183420-mRNA-1:exon:24403;Parent=Msa0183420-mRNA-1
chr1_4 exon 72365557 72366004 72365557 ID=Msa0183420-mRNA-1:exon:24404;Parent=Msa0183420-mRNA-1
chr1_4 five_prime_UTR 72358770 72358939 72358770 ID=Msa0183420-mRNA-1:five_prime_utr;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72359621 72361579 72359621 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72362766 72362903 72362766 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72363190 72363633 72363190 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72363995 72364061 72363995 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72364152 72364291 72364152 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72364421 72364732 72364421 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 CDS 72365194 72365445 72365194 ID=Msa0183420-mRNA-1:cds;Parent=Msa0183420-mRNA-1
chr1_4 three_prime_UTR 72365446 72365482 72365446 ID=Msa0183420-mRNA-1:three_prime_utr;Parent=Msa0183420-mRNA-1
chr1_4 three_prime_UTR 72365557 72366004 72365557 ID=Msa0183420-mRNA-1:three_prime_utr;Parent=Msa0183420-mRNA-1
Gene Sequence

>Msa0183420

ATGGAAGTTCAACAACATGAAGCACATTCTGAAAACAAAGAGCCGGCTGAAAATGCTAATGCCGAACCTGATGGAGTTTCTTGTAAGAAAAGCAATACTATGCAAATTTATAGACAAGATGTTGTCAAGAATAAAAACACTGGGATGGTTGGGATTGTGACAGAAGTTAATGGTGATTCTGATTCGGATTCAGATTCAGATTCCGATTCAGATAGTGGAGTCACTGATGATGAGGGTGAGGAGGGTGATGTTGAGGAAGGTGATGAAAGTAATAATGGTTGCAGAAATTCTGATAGGAATGATACTTCTGTGCACCGTAAGACTGCTGCTCTTCAGACTAACGAGCTACGTGTACTCTGGATGGATGAATCTGAATCCACACAGAATTTCAGTGATGTAGAAGTTGTTGATCGTGGATTTTTACATAGTGATTTTGTAGCTTCTGCCTCTGACCCTACCGGGCAAGTGGGTGTTGTGGTTGATGTCAATATATCTGTGGATTTGTTGGCCCATGATGGATCTATCATAAAAGATGTCTCATCTAAAGACTTGAAGCGTATCAGGGATTTCACTGCTGGAGATTACGTGGTGCTCGGGTCTTGGTTAGGAAAAGTTGATGATGTTTTGGATAATGTGACTGTCTTATTTGATGATGGTTCAGTTTGTAAAGTCTCCAAAGCAGATCCGATGGATCTTAAACCAATTTCGAAGAACAATATTCTTGAAGATGGGCATTTCCCTTATTACCCAGGGCAACGGGTAAGGGCCAAGTCTTCATCAATCTTCAAGATGGCTAGATGGTTGTCTGGCTTGTGGAAAGCAAGTAGGTTAGAAGGTACTGTCACCAATGTTACAGTTGGATCCGTGTTTGTTTATTGGATAGCATCTGCAGGTCATGGGCCATATTCTTCTGCTGCCCCAGCTGAGGAACAGAGTCCAAAAAACTTAAAATTGCTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGACCGGTGTCTTTTGCACTCATCTGCACTGTCATCTTCTGTTTCCATCAACAAAAACAAATCAAAATTGGAACATAACGATTCTGTTACCATTGAATTAGATTCTAATCAAACAGGAAGCGGGTGTGATTCAGAAGACGCTACAGTTGAGGAATCAAATGGGAATAAAGATACTATGGACCTTGATCCAGTGGGTGCTTTGGAAGGGAATGATGGAAATGATAGAAATAATCCTTCATGTGAATCTAGTTCATGTGGTAGTTCTATATCAGTATCAAAGGATCCTGTCCGTGAAGCTTGGCCTCTTCACCGCAAAAAAATAAGGAAAGTTGTCATCAGGAAAGAAAAGAGAGCCCGGAAGAAAGAGGAAAGCTTTGAAAAAGCTCTTCAAATTGTGAACACTAGGACAAGAGTTGATGTTGCTTGGCAGGATGGAACGATAGGGTGTGGACTAGATTCTACAAGTTTAATTCCTATTGATACTCCTGGTGATCATGAATTTGTTTCAGAACAATATGTTGTAGAGAAGACCTCTGATGATGGTGAGGATAATTGTGAAACCAGCCGAGTTGGGGTGGTGAGGAGTGTTGATGCCAAAGAGCGGACAGCTTGTGTGAGGTGGATAAAACCAGCTGCCAAGGTTGATGATCCCCGAGAATTCGACAACGAGGAAATTGTAAGTGTCTATGAGCTAGAGGGCCATCCAGATTATGAGTATTGCTATGGGGACGTGGTTGTTAGACTATCACCCGTGTCTGTCTGTTTAGATGCTTCTGTTGGAGAGTCTACTGAGAAATCGAAGCAGGAAAACGAAGAAAATGGACATAAAAATGAAGCAGCAACCCAAACAGAAACAGCATCTTCTGGCGAAACTGATGTGGAGTTCTCAGACCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATTGAAGTTACATGGGCTGATGGGATGGTATCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGTAGAGATGATGATGCTGAATCACTTGCAGCAGGGAGTGATATAAGCGATGCTGCAACCTGGGAAACCGTTGATGATGATGAAATGGAAGTCCAAGAGGATTCCAGAGAGGTCGTTAATAGGGAAAATTCAAGCAATGTTGCAGAAGAGAATGGAGAGAAAGACTCTGGTAGGACCGCGGCACTTTCTGTCCCACTTGCAGCAATTCGATTTGTAACCAGACTTGCGTCTGGAATATTCTCCAGGGGACAGAAGAACTTGGATCCTGTTCACGTGCAGTCAAATGGTGAAATTGAATGTTCGTCACCAGTTAAAATATGCGAGTCCAGTTCTCAGAAATGTATTGCCATTGATGGTGACAATTTGGGTAGCCAGAGTTGTAAAAATGAGGAGTCTGTTATTCCAGAAAGTTCAGAAAATGTGGAAGCATCTGAGAGGTGCAGCTTGAAGAATAAAGAAGCTCCTGCTAGTTGTGACAATGATGCTTGTAGTTTGAAACATTTTGACATGGTTACAGATCCGTTAGACCATTACTATATTGGTGCAACTGGACAGAGTAACAACCGAAAATGGTATAAGAAGGTGCAACAAGATTGGGGCATACTACAAAATAACCTTCCTGAGGAAATCTATGTACGAGTTTATGAAGATAGAATGGATCTTGTGAGAGCAGTTATTATAGGGCCATTTGGGACTCCTTACCAAGATGGGCTGTTTTTCTTTGATTTTCACCTTCCGCCAGATTATCCTGATGTTCCACCGTCAGCATACTATCATTCGGGTGGTTGGCGTATTAACCCTAATTTGTATGAGGAAGGGAAGGTTTGCCTTAGCCTTCTAAACACATGGACAGGCAGAGGCAATGAAGTATGGGATCCAAAATCTTCTAGCATCCTTCAAGTTCTAGTTTCACTACAAGGGCTAGTACTCAACTCCAAGCCTTACTTCAATGAAGCTGGATATGATAAGCAGACTGGAACAGCTGAAGGAGAGAAGAATTCATTATCATACAATGAGAATACATTTTTACTGAACTGCAAGACCATGATGTATCTTATGCGGAAGCCACCCAAGGATTTTGAAGTGCTCATCAAAGAACATTTTAGGAGGCGTGGTCATTACATTCTTAAGGCTTGTGATGCATATATGAAGGGCTACTTGATTGGCTCGTTGACTAGAGATGCCTCTGTGAGTGACAATAGCAGTCCAAATTCAACCTCTGTTGGTTTCAAGTTGATGTTGGCCAAGATAGTGCCAAAGCTTTTCGTGTCACTTAGTGAAGTTGGGGCTGATTGCGATGAATTTAAGCATTTGAAAGAGTTGTAG
Protein sequence

>Msa0183420

MEVQQHEAHSENKEPAENANAEPDGVSCKKSNTMQIYRQDVVKNKNTGMVGIVTEVNGDSDSDSDSDSDSDSGVTDDEGEEGDVEEGDESNNGCRNSDRNDTSVHRKTAALQTNELRVLWMDESESTQNFSDVEVVDRGFLHSDFVASASDPTGQVGVVVDVNISVDLLAHDGSIIKDVSSKDLKRIRDFTAGDYVVLGSWLGKVDDVLDNVTVLFDDGSVCKVSKADPMDLKPISKNNILEDGHFPYYPGQRVRAKSSSIFKMARWLSGLWKASRLEGTVTNVTVGSVFVYWIASAGHGPYSSAAPAEEQSPKNLKLLSCFAHANWQLGDRCLLHSSALSSSVSINKNKSKLEHNDSVTIELDSNQTGSGCDSEDATVEESNGNKDTMDLDPVGALEGNDGNDRNNPSCESSSCGSSISVSKDPVREAWPLHRKKIRKVVIRKEKRARKKEESFEKALQIVNTRTRVDVAWQDGTIGCGLDSTSLIPIDTPGDHEFVSEQYVVEKTSDDGEDNCETSRVGVVRSVDAKERTACVRWIKPAAKVDDPREFDNEEIVSVYELEGHPDYEYCYGDVVVRLSPVSVCLDASVGESTEKSKQENEENGHKNEAATQTETASSGETDVEFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDAESLAAGSDISDAATWETVDDDEMEVQEDSREVVNRENSSNVAEENGEKDSGRTAALSVPLAAIRFVTRLASGIFSRGQKNLDPVHVQSNGEIECSSPVKICESSSQKCIAIDGDNLGSQSCKNEESVIPESSENVEASERCSLKNKEAPASCDNDACSLKHFDMVTDPLDHYYIGATGQSNNRKWYKKVQQDWGILQNNLPEEIYVRVYEDRMDLVRAVIIGPFGTPYQDGLFFFDFHLPPDYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQTGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLIKEHFRRRGHYILKACDAYMKGYLIGSLTRDASVSDNSSPNSTSVGFKLMLAKIVPKLFVSLSEVGADCDEFKHLKEL*