AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0682500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682500 MtrunA17_Chr4g0028651 97.540 691 17 0 1 691 5 695 0.0 1391
Msa0682500 MtrunA17_Chr5g0435281 43.380 355 186 7 340 691 169 511 1.98e-88 286
Msa0682500 MtrunA17_Chr3g0133631 30.560 589 335 15 108 690 49 569 1.81e-68 234
Msa0682500 MtrunA17_Chr8g0374741 33.782 595 340 17 117 689 33 595 1.02e-67 233
Msa0682500 MtrunA17_Chr5g0402501 37.609 343 164 9 350 689 249 544 1.98e-65 225
Msa0682500 MtrunA17_Chr1g0153951 31.993 597 325 18 112 690 13 546 5.41e-65 224
Msa0682500 MtrunA17_Chr8g0373901 30.857 350 203 9 351 689 299 620 5.38e-39 153
Msa0682500 MtrunA17_Chr5g0399331 28.926 363 210 11 338 690 252 576 3.37e-36 144
Msa0682500 MtrunA17_Chr5g0403231 30.791 354 209 8 349 690 290 619 1.01e-35 143
Msa0682500 MtrunA17_Chr4g0034351 27.171 357 223 11 343 690 285 613 3.67e-28 120
Msa0682500 MtrunA17_Chr3g0115381 32.692 156 95 4 462 615 544 691 1.17e-12 71.2
Msa0682500 MtrunA17_Chr8g0351061 29.605 152 98 2 461 610 408 552 1.95e-12 70.5
Msa0682500 MtrunA17_Chr1g0163291 25.676 222 139 7 461 673 386 590 3.67e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682500 AT5G60720.1 51.777 647 245 15 101 691 56 691 0.0 579
Msa0682500 AT2G39690.2 43.143 350 178 6 343 691 89 418 7.70e-87 279
Msa0682500 AT2G39690.4 43.143 350 178 6 343 691 170 499 6.05e-86 279
Msa0682500 AT2G39690.5 43.143 350 178 6 343 691 196 525 7.06e-86 280
Msa0682500 AT2G39690.8 42.571 350 179 6 343 691 170 498 7.51e-84 274
Msa0682500 AT2G39690.1 42.571 350 179 6 343 691 196 524 9.98e-84 274
Msa0682500 AT5G42690.3 39.942 343 168 9 349 691 184 488 9.95e-67 228
Msa0682500 AT5G42690.5 39.942 343 168 9 349 691 209 513 2.00e-66 228
Msa0682500 AT5G42690.1 39.942 343 168 9 349 691 235 539 4.59e-66 227
Msa0682500 AT5G42690.2 39.942 343 168 9 349 691 236 540 4.65e-66 227
Msa0682500 AT5G42690.4 39.942 343 168 9 349 691 236 540 4.65e-66 227
Msa0682500 AT3G12540.2 38.462 351 181 10 350 691 181 505 5.78e-64 221
Msa0682500 AT3G12540.1 38.462 351 181 10 350 691 248 572 9.49e-64 222
Msa0682500 AT4G37080.2 31.485 613 322 16 117 689 54 608 3.94e-62 218
Msa0682500 AT4G37080.3 31.485 613 322 16 117 689 54 608 3.94e-62 218
Msa0682500 AT4G37080.1 31.485 613 322 16 117 689 41 595 6.57e-62 218
Msa0682500 AT2G39690.6 43.145 248 121 5 343 589 196 424 2.30e-54 192
Msa0682500 AT2G39690.7 42.339 248 122 5 343 589 196 423 2.35e-52 187
Msa0682500 AT5G47380.5 28.977 352 197 7 350 690 222 531 1.04e-40 157
Msa0682500 AT2G39690.3 42.424 198 99 4 343 539 170 353 1.60e-40 152
Msa0682500 AT5G47380.4 28.409 352 199 8 350 690 278 587 1.60e-40 157
Msa0682500 AT5G47380.1 28.409 352 199 8 350 690 278 587 2.52e-40 157
Msa0682500 AT4G37080.4 29.825 513 265 14 117 589 54 511 1.52e-35 141
Msa0682500 AT1G16750.1 30.788 419 226 15 318 689 126 527 6.15e-35 140
Msa0682500 AT5G66600.7 31.143 350 208 10 350 689 228 554 3.48e-34 138
Msa0682500 AT5G66600.14 31.429 350 207 11 350 689 282 608 3.60e-34 139
Msa0682500 AT5G66600.1 31.429 350 207 11 350 689 282 608 3.60e-34 139
Msa0682500 AT5G66600.4 31.429 350 207 11 350 689 282 608 3.60e-34 139
Msa0682500 AT5G66600.9 31.429 350 207 11 350 689 282 608 3.60e-34 139
Msa0682500 AT5G66600.3 31.429 350 207 11 350 689 282 608 3.60e-34 139
Msa0682500 AT5G66600.2 31.143 350 208 10 350 689 262 588 4.76e-34 138
Msa0682500 AT2G23700.1 31.224 237 142 4 462 690 479 702 2.53e-33 137
Msa0682500 AT1G76620.1 27.401 354 215 10 350 690 193 517 2.69e-28 120
Msa0682500 AT1G43020.1 33.684 190 119 4 460 645 211 397 1.20e-24 108
Msa0682500 AT3G18900.4 28.736 261 168 6 435 689 282 530 2.51e-24 108
Msa0682500 AT3G18900.5 28.736 261 168 6 435 689 277 525 2.96e-24 107
Msa0682500 AT3G18900.6 28.736 261 168 6 435 689 201 449 4.19e-24 106
Msa0682500 AT3G18900.3 28.736 261 168 6 435 689 201 449 4.19e-24 106
Msa0682500 AT5G47380.2 28.685 251 128 7 350 589 278 488 1.10e-22 102
Msa0682500 AT5G47380.3 28.906 256 130 8 350 594 278 492 1.85e-22 102
Msa0682500 AT1G21060.2 24.355 349 211 8 350 689 187 491 2.50e-22 101
Msa0682500 AT1G21060.1 24.355 349 211 8 350 689 199 503 3.22e-22 101
Msa0682500 AT5G66600.12 31.600 250 144 7 350 589 282 514 3.66e-22 101
Msa0682500 AT5G66600.11 31.600 250 144 7 350 589 282 514 3.66e-22 101
Msa0682500 AT5G66600.6 31.600 250 144 7 350 589 282 514 3.66e-22 101
Msa0682500 AT5G66600.13 31.600 250 144 7 350 589 282 514 3.66e-22 101
Msa0682500 AT1G16750.2 33.333 261 125 11 318 539 126 376 3.03e-20 94.4
Msa0682500 AT5G66600.15 33.508 191 115 5 350 538 228 408 2.83e-18 88.6
Msa0682500 AT5G66600.10 34.555 191 113 5 350 538 282 462 2.93e-18 89.0
Msa0682500 AT5G66600.8 34.555 191 113 5 350 538 282 462 2.93e-18 89.0
Msa0682500 AT5G66600.5 34.555 191 113 5 350 538 282 462 2.93e-18 89.0
Msa0682500 AT1G76620.2 28.854 253 145 8 350 589 193 423 1.33e-16 83.2
Msa0682500 AT3G18900.1 32.298 161 97 4 435 589 282 436 3.31e-16 82.4
Msa0682500 AT1G43020.3 36.364 132 77 4 460 587 211 339 1.64e-15 79.0
Msa0682500 AT3G18900.2 36.449 107 66 1 435 541 282 386 2.71e-14 75.9
Msa0682500 AT3G11920.1 27.103 214 140 7 461 669 413 615 1.37e-13 74.7
Msa0682500 AT4G08550.2 29.412 153 102 2 462 614 478 624 7.50e-12 69.3
Msa0682500 AT4G08550.1 29.412 153 102 2 462 614 424 570 8.63e-12 68.9

Find 145 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACATAAGACTTGGTTTC+TGG 0.166945 4_4:-44136750 None:intergenic
CAGTTTGAAGAGTGCTAATT+TGG 0.181753 4_4:-44135692 None:intergenic
ATCAACAGAAATTAGCATTT+TGG 0.183836 4_4:+44137212 Msa0682500:CDS
ACACATAACTTCTCTTTCTT+TGG 0.210882 4_4:+44133055 Msa0682500:CDS
TCCACCTCAGAAAAGTTAAT+TGG 0.228419 4_4:+44137371 Msa0682500:CDS
TCAGTTGTACGTGAACTTTA+TGG 0.245870 4_4:+44138317 Msa0682500:CDS
CAAAATCAAGCATGTTTCTT+AGG 0.251643 4_4:-44139169 None:intergenic
ACTTGTTTGGTTGCCACTTT+AGG 0.257192 4_4:-44136576 None:intergenic
TATGTTCACTTCAAGTTCTA+TGG 0.258096 4_4:+44136861 Msa0682500:CDS
AGAAGCTTCCGGGTCGATTT+GGG 0.258957 4_4:+44136721 Msa0682500:CDS
CTTTAAGCTCGAGAAGCTTC+CGG 0.268603 4_4:+44136710 Msa0682500:CDS
TTTAAGCTCGAGAAGCTTCC+GGG 0.287897 4_4:+44136711 Msa0682500:CDS
AATCAATGGTTGAATGCTTC+AGG 0.301830 4_4:+44139258 Msa0682500:CDS
ACCTTGGAAGGAAGAAAATT+AGG 0.305590 4_4:-44135156 None:intergenic
TTTCTTTGTTATTAAACTTA+AGG 0.310810 4_4:+44139379 Msa0682500:three_prime_UTR
GGTTCATGAAATATTGGATA+TGG 0.316220 4_4:+44135098 Msa0682500:CDS
TTATAGGGATTCATTCAATA+TGG 0.316382 4_4:+44137341 Msa0682500:intron
TATTGGATATGGTAAATAAT+AGG 0.316666 4_4:+44135109 Msa0682500:CDS
AATTCTAAGCGTTTCATGTT+TGG 0.316944 4_4:+44133166 Msa0682500:CDS
CAGTTGTACGTGAACTTTAT+GGG 0.329243 4_4:+44138318 Msa0682500:CDS
AGAAAAGGTTCATGAAATAT+TGG 0.331517 4_4:+44135092 Msa0682500:CDS
TGCAGCCAGTTACCTACTTC+AGG 0.340723 4_4:+44139224 Msa0682500:CDS
GAGAAGCTTCCGGGTCGATT+TGG 0.343701 4_4:+44136720 Msa0682500:CDS
CTATCTTCAAGCTTCAATTC+TGG 0.350213 4_4:+44139109 Msa0682500:CDS
AACATCAAGAGCAATGGAAT+TGG 0.365837 4_4:+44136651 Msa0682500:CDS
CTGCTTCTTTGAACAGAACT+AGG 0.368104 4_4:-44135825 None:intergenic
TGAAAATTTGTTGATGAAGT+TGG 0.375911 4_4:-44132997 None:intergenic
GGTTGAATGCTTCAGGGGTC+AGG 0.377499 4_4:+44139265 Msa0682500:CDS
TACCTACTTCAGGGACTCTA+AGG 0.378077 4_4:+44139234 Msa0682500:CDS
TATTGGTCCTTACAAGAATC+TGG 0.381010 4_4:+44136837 Msa0682500:CDS
CACTATGCTTCAAAGGTTGC+TGG 0.381643 4_4:+44135062 Msa0682500:CDS
CAAATTAGCACTCTTCAAAC+TGG 0.386190 4_4:+44135693 Msa0682500:CDS
ATGCTTTCAGATAACTTGTT+TGG 0.391339 4_4:-44136589 None:intergenic
ATTAGACCGGCTATAATAGA+TGG 0.399441 4_4:-44139458 None:intergenic
CTTCTTCATCTTCATAATGT+TGG 0.403192 4_4:-44133105 None:intergenic
ACTTTATGGGCTTGAATTTG+TGG 0.408759 4_4:+44138331 Msa0682500:CDS
GAGTCCATTCCTAGGGATAT+TGG 0.417480 4_4:+44136820 Msa0682500:CDS
ATATTGAAATTCATAGTCAT+AGG 0.417484 4_4:-44139327 None:intergenic
CAACATAAGACTTGGTTTCT+GGG 0.418995 4_4:-44136749 None:intergenic
TTTCATAAGTAAAGCTATCA+AGG 0.422572 4_4:+44135893 Msa0682500:CDS
CAGAGAGCAAATGTGACATT+TGG 0.422686 4_4:-44138356 None:intergenic
TTCCGTTACTAAGAAAGTTA+AGG 0.422871 4_4:+44136914 Msa0682500:CDS
GAATGCAAAGACCTTGAAAC+TGG 0.431115 4_4:-44136685 None:intergenic
ATACAAAATATGTATATAGA+AGG 0.433347 4_4:+44139407 Msa0682500:three_prime_UTR
TTGGAACCAAGGGAATTTGA+TGG 0.435795 4_4:+44135761 Msa0682500:CDS
GAAGGGCTTGATATAAACTT+TGG 0.435869 4_4:-44136886 None:intergenic
ATGTTTCTTAGGAGAAGTTC+TGG 0.438412 4_4:-44139158 None:intergenic
TCTGAATCAAAGATACCATA+TGG 0.439160 4_4:-44136796 None:intergenic
TATTGATTCACTTGTGGAAT+GGG 0.441509 4_4:+44139199 Msa0682500:CDS
GAGTCCCTGAAGTAGGTAAC+TGG 0.444769 4_4:-44139229 None:intergenic
AGTTTGAAGAGTGCTAATTT+GGG 0.447313 4_4:-44135691 None:intergenic
TATGTTGCCTCCTATGTTGA+GGG 0.458305 4_4:-44138078 None:intergenic
TTTCATGTTTGGCTCTTCCA+TGG 0.465054 4_4:+44133177 Msa0682500:CDS
TTATGTTGCCTCCTATGTTG+AGG 0.466014 4_4:-44138079 None:intergenic
TTTGTTGTGGTTGTGAGTGC+TGG 0.467108 4_4:-44132946 None:intergenic
ATTCAGAAGAGTCCATTCCT+AGG 0.471954 4_4:+44136812 Msa0682500:CDS
TACCTTAACTTTCTTAGTAA+CGG 0.477141 4_4:-44136916 None:intergenic
AGTTATGTGTTGAAGTTGAG+AGG 0.478235 4_4:-44133042 None:intergenic
CAGAAGAGAATGACCTAAAG+TGG 0.486770 4_4:+44136563 Msa0682500:CDS
CCCCTTCCATCTATTATAGC+CGG 0.489914 4_4:+44139452 Msa0682500:three_prime_UTR
CTTCAGACAGTTGATTTGAA+AGG 0.491414 4_4:+44137181 Msa0682500:CDS
AATTTCATGAAAGAGTTACT+AGG 0.496129 4_4:+44136012 Msa0682500:CDS
TTCTGGCAACTAGCAACAAA+AGG 0.496254 4_4:+44139126 Msa0682500:CDS
AATTGCCCATCAAATTCCCT+TGG 0.505557 4_4:-44135767 None:intergenic
AAACATTGTATTACCTTGGA+AGG 0.507274 4_4:-44135168 None:intergenic
GCAACTAGCAACAAAAGGAT+AGG 0.509035 4_4:+44139131 Msa0682500:CDS
TGGAACCAAGGGAATTTGAT+GGG 0.510345 4_4:+44135762 Msa0682500:CDS
GTTGAATGCTTCAGGGGTCA+GGG 0.511357 4_4:+44139266 Msa0682500:CDS
GTTGCTGGACCAAGAAGAAA+AGG 0.511634 4_4:+44135077 Msa0682500:CDS
ATAGATATAGCTGAACCGTT+TGG 0.512371 4_4:-44135132 None:intergenic
TTGTGGTTGTGAGTGCTGGT+AGG 0.515279 4_4:-44132942 None:intergenic
TGCTTTAGGCACAAAGGAAG+GGG 0.515847 4_4:+44138276 Msa0682500:intron
TCCTTGTGCAACATAAGACT+TGG 0.518516 4_4:-44136757 None:intergenic
TATGCTTTAGGCACAAAGGA+AGG 0.520034 4_4:+44138274 Msa0682500:intron
ACCTTAGGTGATGGATGGCG+CGG 0.520139 4_4:-44136074 None:intergenic
ATCAATGGTTGAATGCTTCA+GGG 0.521046 4_4:+44139259 Msa0682500:CDS
TGGAAGGGGACAATTCTAGA+TGG 0.526820 4_4:-44139438 None:intergenic
AGTTTGACTATCAATTAGAC+CGG 0.530318 4_4:-44139471 None:intergenic
ATGGTAAATAATAGGCCAAA+CGG 0.530946 4_4:+44135117 Msa0682500:CDS
AACATAACCAGATTCTTGTA+AGG 0.532047 4_4:-44136844 None:intergenic
TTATGTTGCACAAGGAATCA+AGG 0.533454 4_4:+44136764 Msa0682500:CDS
CGCGGGTCTCGCATAGGCGA+GGG 0.535072 4_4:-44136056 None:intergenic
TCAAGGCAGCAAGATCCATA+TGG 0.535834 4_4:+44136781 Msa0682500:CDS
AGATGCTTCTAATATGAAAG+AGG 0.540918 4_4:+44138142 Msa0682500:CDS
AACAGGTCACTATGCTTCAA+AGG 0.544746 4_4:+44135055 Msa0682500:intron
GTCACATTTGCTCTCTGTAG+TGG 0.549863 4_4:+44138362 Msa0682500:CDS
TTCCTTAGAGTCCCTGAAGT+AGG 0.552540 4_4:-44139236 None:intergenic
GCAGCCAGTTACCTACTTCA+GGG 0.552874 4_4:+44139225 Msa0682500:CDS
GCGCGGGTCTCGCATAGGCG+AGG 0.553941 4_4:-44136057 None:intergenic
GTTATGTGTTGAAGTTGAGA+GGG 0.554364 4_4:-44133041 None:intergenic
GACCGGCTATAATAGATGGA+AGG 0.556114 4_4:-44139454 None:intergenic
ACCGGCTATAATAGATGGAA+GGG 0.558898 4_4:-44139453 None:intergenic
ATATTGATTCACTTGTGGAA+TGG 0.560035 4_4:+44139198 Msa0682500:CDS
AACAATGTTAAAACAACATG+GGG 0.561009 4_4:-44133140 None:intergenic
AGGGACTCTAAGGAAATCAA+TGG 0.562592 4_4:+44139244 Msa0682500:CDS
CCCGCGCCATCCATCACCTA+AGG 0.564342 4_4:+44136073 Msa0682500:CDS
ATGCTTTAGGCACAAAGGAA+GGG 0.565804 4_4:+44138275 Msa0682500:intron
GGATCAAGCAGTGACCTAGT+TGG 0.569135 4_4:-44136532 None:intergenic
TAACGGGCTGCAAAAGAAAG+AGG 0.569855 4_4:+44133634 Msa0682500:CDS
TTCAGAAGAGTCCATTCCTA+GGG 0.570102 4_4:+44136813 Msa0682500:CDS
TGCATACCTTAGGTGATGGA+TGG 0.572769 4_4:-44136079 None:intergenic
AGGACCAATATCCCTAGGAA+TGG 0.574284 4_4:-44136824 None:intergenic
GTTGTGAGTGCTGGTAGGAG+TGG 0.575062 4_4:-44132937 None:intergenic
GGATGGCGCGGGTCTCGCAT+AGG 0.575094 4_4:-44136062 None:intergenic
TCATTCTCTTCTGATAGAAG+TGG 0.575222 4_4:-44136553 None:intergenic
GCAGTAGTAATGTTCATGAA+AGG 0.578237 4_4:+44135844 Msa0682500:CDS
CAACTAGCAACAAAAGGATA+GGG 0.578856 4_4:+44139132 Msa0682500:CDS
TATTGAAATTCATAGTCATA+GGG 0.579118 4_4:-44139326 None:intergenic
TAGTAATGTTCATGAAAGGA+TGG 0.582716 4_4:+44135848 Msa0682500:CDS
GGTCTGCATACCTTAGGTGA+TGG 0.583065 4_4:-44136083 None:intergenic
AGAAGATGATGACACAAGCT+TGG 0.584470 4_4:-44133080 None:intergenic
GTGTAGGCAACCCTCAACAT+AGG 0.591704 4_4:+44138068 Msa0682500:intron
TTGTAAGGACCAATATCCCT+AGG 0.593631 4_4:-44136829 None:intergenic
ACTCAGAACATCAAGAGCAA+TGG 0.595023 4_4:+44136645 Msa0682500:CDS
AAACAATGTTAAAACAACAT+GGG 0.595403 4_4:-44133141 None:intergenic
GAAACAATGTTAAAACAACA+TGG 0.596325 4_4:-44133142 None:intergenic
TTGTGAGTGCTGGTAGGAGT+GGG 0.597509 4_4:-44132936 None:intergenic
TGTGGATATTGATTCACTTG+TGG 0.598308 4_4:+44139193 Msa0682500:CDS
TTAGTAACGGAATAGACGAA+GGG 0.601144 4_4:-44136903 None:intergenic
AAGGATGGCATTTGAAACAA+AGG 0.605174 4_4:+44135863 Msa0682500:CDS
TTCATAAGTAAAGCTATCAA+GGG 0.605273 4_4:+44135894 Msa0682500:CDS
ATTTAGTTGAGTATGATCCA+TGG 0.608149 4_4:-44133194 None:intergenic
CCTTAGGTGATGGATGGCGC+GGG 0.608252 4_4:-44136073 None:intergenic
CTTAGTAACGGAATAGACGA+AGG 0.608438 4_4:-44136904 None:intergenic
TAGGCAACCCTCAACATAGG+AGG 0.618243 4_4:+44138071 Msa0682500:intron
ACTTACAATATCAATGTGAG+AGG 0.626776 4_4:-44133239 None:intergenic
GGGTCTCGCATAGGCGAGGG+AGG 0.628482 4_4:-44136053 None:intergenic
ATTGTTAGCAGAGCTAGTCA+TGG 0.628790 4_4:+44135641 Msa0682500:CDS
GGGTCAGGGTGGTAATGTCA+AGG 0.634097 4_4:+44139280 Msa0682500:CDS
GCAATATGCTTTAGGCACAA+AGG 0.637836 4_4:+44138270 Msa0682500:intron
ACTCACAACCACAACAAAGA+CGG 0.640564 4_4:+44132951 Msa0682500:CDS
ACCAAGTCTTATGTTGCACA+AGG 0.641062 4_4:+44136756 Msa0682500:CDS
TCAATGGTTGAATGCTTCAG+GGG 0.646768 4_4:+44139260 Msa0682500:CDS
GGGTCGATCCCAAATCGACC+CGG 0.650077 4_4:-44136729 None:intergenic
CAATGTTAAAACAACATGGG+GGG 0.651426 4_4:-44133138 None:intergenic
GTGAGGATATACACAGGCGA+TGG 0.656690 4_4:+44139053 Msa0682500:CDS
CCGGCTATAATAGATGGAAG+GGG 0.657769 4_4:-44139452 None:intergenic
TGCACTTAGATCTTCCAACT+AGG 0.658281 4_4:+44136518 Msa0682500:CDS
CTTACAATATCAATGTGAGA+GGG 0.665631 4_4:-44133238 None:intergenic
GTTAATTGGATTGATTAACA+AGG 0.665903 4_4:+44137385 Msa0682500:CDS
GAATGCTTCAGGGGTCAGGG+TGG 0.670635 4_4:+44139269 Msa0682500:CDS
GCTTTAGGCACAAAGGAAGG+GGG 0.676472 4_4:+44138277 Msa0682500:intron
ATTCAGGTGAGGATATACAC+AGG 0.703364 4_4:+44139047 Msa0682500:intron
ACAATGTTAAAACAACATGG+GGG 0.730640 4_4:-44133139 None:intergenic
ACACGAACAAGAAATCACCA+AGG 0.745029 4_4:+44135722 Msa0682500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTCCTATAAATATAT+AGG + chr4_4:44134936-44134955 Msa0682500:intron 10.0%
!! ATTATTCCTATAAATATATA+GGG + chr4_4:44134937-44134956 Msa0682500:intron 10.0%
!!! TTACTATAAATTATTTTAAG+AGG + chr4_4:44137812-44137831 Msa0682500:intron 10.0%
!!! TACTATAAATTATTTTAAGA+GGG + chr4_4:44137813-44137832 Msa0682500:intron 10.0%
!!! TACATTTAATTTTCTTTATT+CGG + chr4_4:44137876-44137895 Msa0682500:intron 10.0%
!! TTATATATGAAAAGCTTAAT+AGG - chr4_4:44134276-44134295 None:intergenic 15.0%
!! AACTTCAAAAATATCAATAA+TGG - chr4_4:44134307-44134326 None:intergenic 15.0%
!! TTTATAGTAATGTATTAAGA+TGG + chr4_4:44134724-44134743 Msa0682500:intron 15.0%
!! TTATTCCTATAAATATATAG+GGG + chr4_4:44134938-44134957 Msa0682500:intron 15.0%
!! GAAACATAATTATAATAAGA+TGG - chr4_4:44136257-44136276 None:intergenic 15.0%
!!! ATAGACTTGATTTTAAAAAT+TGG + chr4_4:44136378-44136397 Msa0682500:intron 15.0%
!! AATGAAAAATATGTAGAAAA+TGG - chr4_4:44138173-44138192 None:intergenic 15.0%
!! ACAAAAAAATAACAAAATCA+TGG - chr4_4:44138227-44138246 None:intergenic 15.0%
!! TTTGAAAAAGTAAAAAATCA+CGG - chr4_4:44138875-44138894 None:intergenic 15.0%
!!! TTAATTTGAAGCTAATATTT+TGG + chr4_4:44138930-44138949 Msa0682500:intron 15.0%
!!! TTTAGCCTAAAAAATTTTTA+AGG + chr4_4:44138976-44138995 Msa0682500:intron 15.0%
!!! TTTGTCCTTAAAAATTTTTT+AGG - chr4_4:44138984-44139003 None:intergenic 15.0%
!!! TTTCTTTGTTATTAAACTTA+AGG + chr4_4:44139379-44139398 Msa0682500:three_prime_UTR 15.0%
!! ATACAAAATATGTATATAGA+AGG + chr4_4:44139407-44139426 Msa0682500:three_prime_UTR 15.0%
!! AAACAATGTTAAAACAACAT+GGG - chr4_4:44133144-44133163 None:intergenic 20.0%
!! TGACACTTAATATAATATTG+CGG + chr4_4:44133412-44133431 Msa0682500:intron 20.0%
!! AAAGAAAAAGAAAAAGACAA+GGG - chr4_4:44133596-44133615 None:intergenic 20.0%
!! ATATATATAAATACGTAGCT+TGG - chr4_4:44133684-44133703 None:intergenic 20.0%
!! AATCTAATCATCAAATCAAA+AGG + chr4_4:44133756-44133775 Msa0682500:intron 20.0%
!!! TATTTAGTGAAGTATCAAAA+TGG - chr4_4:44133827-44133846 None:intergenic 20.0%
!! AAAATATTAGTAAATGTCGA+TGG + chr4_4:44133876-44133895 Msa0682500:intron 20.0%
!! TTCAATAATTTAACTGTTGA+TGG - chr4_4:44133980-44133999 None:intergenic 20.0%
!! TTATTTAGTAGCTGATATAT+TGG + chr4_4:44134361-44134380 Msa0682500:intron 20.0%
!! TAAATAATGAATTCTTACGA+AGG - chr4_4:44134397-44134416 None:intergenic 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr4_4:44134500-44134519 Msa0682500:intron 20.0%
!! TATTGGATATGGTAAATAAT+AGG + chr4_4:44135109-44135128 Msa0682500:CDS 20.0%
!! CAAGGTAATATAATGTTATA+GGG + chr4_4:44135282-44135301 Msa0682500:intron 20.0%
!! AATATAATGTTATAGGGATA+TGG + chr4_4:44135288-44135307 Msa0682500:intron 20.0%
!! ATATAATGTTATAGGGATAT+GGG + chr4_4:44135289-44135308 Msa0682500:intron 20.0%
!!! TCAAGAAAATCTTTCTTTTT+TGG - chr4_4:44135577-44135596 None:intergenic 20.0%
!!! AATTGTGCAATTTTGATATT+TGG + chr4_4:44136197-44136216 Msa0682500:intron 20.0%
!!! TTTTTAAAATCAAGTCTATG+TGG - chr4_4:44136377-44136396 None:intergenic 20.0%
!! ATTGTAACAAAACGAATATT+TGG + chr4_4:44136435-44136454 Msa0682500:intron 20.0%
!! TTGTAACAAAACGAATATTT+GGG + chr4_4:44136436-44136455 Msa0682500:intron 20.0%
!! ACATGAATAATGTAAATATC+AGG + chr4_4:44136941-44136960 Msa0682500:intron 20.0%
!! AATATCAGGAATTTAAATAG+TGG + chr4_4:44136955-44136974 Msa0682500:intron 20.0%
!!! TGTATGAAGGTTTTAAATAA+AGG - chr4_4:44137055-44137074 None:intergenic 20.0%
!! TAGAATTATACTATGTATGA+AGG - chr4_4:44137068-44137087 None:intergenic 20.0%
!!! AGATTTTATTATGTTTCTTG+TGG + chr4_4:44137135-44137154 Msa0682500:intron 20.0%
!!! ATATCAAGACAAGATTTTTA+AGG - chr4_4:44137413-44137432 None:intergenic 20.0%
!!! TATAAATTATTTTAAGAGGG+TGG + chr4_4:44137816-44137835 Msa0682500:intron 20.0%
!! AGAAAAATCATAAAACAGAA+TGG + chr4_4:44138017-44138036 Msa0682500:intron 20.0%
!! CTACTAGATCAATATATATA+TGG - chr4_4:44138501-44138520 None:intergenic 20.0%
!! TTAATTTAAATGTGAAGAAG+TGG + chr4_4:44138544-44138563 Msa0682500:intron 20.0%
!! TAATTTAAATGTGAAGAAGT+GGG + chr4_4:44138545-44138564 Msa0682500:intron 20.0%
!! ATTAATTGCACAACATTTAA+AGG + chr4_4:44138644-44138663 Msa0682500:intron 20.0%
!! AATCAATATGCATTATATTC+AGG + chr4_4:44139031-44139050 Msa0682500:intron 20.0%
!! TATTGAAATTCATAGTCATA+GGG - chr4_4:44139329-44139348 None:intergenic 20.0%
!! ATATTGAAATTCATAGTCAT+AGG - chr4_4:44139330-44139349 None:intergenic 20.0%
!!! TGAAAATTTGTTGATGAAGT+TGG - chr4_4:44133000-44133019 None:intergenic 25.0%
! AACAATGTTAAAACAACATG+GGG - chr4_4:44133143-44133162 None:intergenic 25.0%
! GAAACAATGTTAAAACAACA+TGG - chr4_4:44133145-44133164 None:intergenic 25.0%
! TAGTATACTATTATGCATCA+TGG + chr4_4:44133355-44133374 Msa0682500:intron 25.0%
!! TAAATTGCGTTTGTAGTTTT+TGG + chr4_4:44133381-44133400 Msa0682500:intron 25.0%
! TATAATATTGCGGTAAAATG+TGG + chr4_4:44133422-44133441 Msa0682500:intron 25.0%
! CAAAGAAAAAGAAAAAGACA+AGG - chr4_4:44133597-44133616 None:intergenic 25.0%
! CAGAGGAAAAAGAAAATTAA+CGG + chr4_4:44133617-44133636 Msa0682500:intron 25.0%
! AGAGGAAAAAGAAAATTAAC+GGG + chr4_4:44133618-44133637 Msa0682500:intron 25.0%
! AAACTTATCATACGTTCATT+TGG - chr4_4:44133853-44133872 None:intergenic 25.0%
! TAAGGCCTATTTAATTAATC+AGG + chr4_4:44134205-44134224 Msa0682500:intron 25.0%
! CTAAATAACCAATCATATGA+AGG - chr4_4:44134349-44134368 None:intergenic 25.0%
! ATATAGGGCAAAACTTATTA+AGG - chr4_4:44134447-44134466 None:intergenic 25.0%
!! TAATAAGTTTTGCCCTATAT+AGG + chr4_4:44134447-44134466 Msa0682500:intron 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr4_4:44134497-44134516 None:intergenic 25.0%
! ATACTAATTAGTCCAAACTT+TGG + chr4_4:44134815-44134834 Msa0682500:intron 25.0%
! AAACTTATAGTTCCAAAGTT+TGG - chr4_4:44134830-44134849 None:intergenic 25.0%
! AATGGCATATAGCATTAAAT+AGG + chr4_4:44134903-44134922 Msa0682500:intron 25.0%
! TAACTCCCCTATATATTTAT+AGG - chr4_4:44134946-44134965 None:intergenic 25.0%
! CTATATGCCAAAAAATTCAA+TGG + chr4_4:44134968-44134987 Msa0682500:intron 25.0%
!!! CTATATGCCATTGAATTTTT+TGG - chr4_4:44134978-44134997 None:intergenic 25.0%
! CAAAAAATTCAATGGCATAT+AGG + chr4_4:44134976-44134995 Msa0682500:intron 25.0%
!!! GACTTGTTAATGTAATAAAC+AGG + chr4_4:44135038-44135057 Msa0682500:intron 25.0%
! AGAAAAGGTTCATGAAATAT+TGG + chr4_4:44135092-44135111 Msa0682500:CDS 25.0%
! GTCAAGGAAAAATATATATG+AGG - chr4_4:44135195-44135214 None:intergenic 25.0%
! ACACTATGAAAATTTAGCTA+GGG - chr4_4:44135233-44135252 None:intergenic 25.0%
! TTCAAAACTTCATATATGCA+AGG + chr4_4:44135264-44135283 Msa0682500:intron 25.0%
! GCAAGGTAATATAATGTTAT+AGG + chr4_4:44135281-44135300 Msa0682500:intron 25.0%
! TTGATGAAACATTGTTGTAA+TGG - chr4_4:44135425-44135444 None:intergenic 25.0%
! CAACACTATTGTAATAAACT+AGG + chr4_4:44135442-44135461 Msa0682500:intron 25.0%
!!! AATTTTTGACTTAGATTCCT+TGG - chr4_4:44135742-44135761 None:intergenic 25.0%
! AGGAATCTAAGTCAAAAATT+TGG + chr4_4:44135742-44135761 Msa0682500:CDS 25.0%
! TTTCATAAGTAAAGCTATCA+AGG + chr4_4:44135893-44135912 Msa0682500:CDS 25.0%
! TTCATAAGTAAAGCTATCAA+GGG + chr4_4:44135894-44135913 Msa0682500:CDS 25.0%
! TTTAGTCTCAATGAAAAAAC+AGG + chr4_4:44135936-44135955 Msa0682500:CDS 25.0%
! AATTTCATGAAAGAGTTACT+AGG + chr4_4:44136012-44136031 Msa0682500:CDS 25.0%
! TTTGATATTGCAGAAAATCT+CGG + chr4_4:44136991-44137010 Msa0682500:intron 25.0%
!! ATCAACAGAAATTAGCATTT+TGG + chr4_4:44137212-44137231 Msa0682500:CDS 25.0%
! TTATAGGGATTCATTCAATA+TGG + chr4_4:44137341-44137360 Msa0682500:intron 25.0%
! GTTAATTGGATTGATTAACA+AGG + chr4_4:44137385-44137404 Msa0682500:CDS 25.0%
!! AATTTGCTTATAATAGTGAC+TGG - chr4_4:44137657-44137676 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG + chr4_4:44137583-44137602 Msa0682500:intron 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + chr4_4:44137657-44137676 Msa0682500:intron 25.0%
! ACTTTCGAAAAAAAGATGTT+TGG + chr4_4:44137774-44137793 Msa0682500:intron 25.0%
!!! CAATAGAGCATTTTATTTTG+AGG + chr4_4:44138114-44138133 Msa0682500:CDS 25.0%
! AAATGCTACTATAGTCTATA+AGG - chr4_4:44138478-44138497 None:intergenic 25.0%
! AATTTAAATGTGAAGAAGTG+GGG + chr4_4:44138546-44138565 Msa0682500:intron 25.0%
! TTTCGAATATAAAGTGTGTT+AGG + chr4_4:44138751-44138770 Msa0682500:intron 25.0%
ACACATAACTTCTCTTTCTT+TGG + chr4_4:44133055-44133074 Msa0682500:CDS 30.0%
CTTCTTCATCTTCATAATGT+TGG - chr4_4:44133108-44133127 None:intergenic 30.0%
ACAATGTTAAAACAACATGG+GGG - chr4_4:44133142-44133161 None:intergenic 30.0%
AATTCTAAGCGTTTCATGTT+TGG + chr4_4:44133166-44133185 Msa0682500:CDS 30.0%
ATTTAGTTGAGTATGATCCA+TGG - chr4_4:44133197-44133216 None:intergenic 30.0%
CTTACAATATCAATGTGAGA+GGG - chr4_4:44133241-44133260 None:intergenic 30.0%
ACTTACAATATCAATGTGAG+AGG - chr4_4:44133242-44133261 None:intergenic 30.0%
TTAGTAGACAGAAATTGTAG+AGG - chr4_4:44133546-44133565 None:intergenic 30.0%
! CTTTTTCTTTTTCTTTGCAG+AGG + chr4_4:44133600-44133619 Msa0682500:intron 30.0%
!! GAACTTGAAAAAGAGGTATT+TGG + chr4_4:44133656-44133675 Msa0682500:intron 30.0%
AGTTAGAGTGACATATATAG+AGG + chr4_4:44134060-44134079 Msa0682500:intron 30.0%
CCTGACCTGATTAATTAAAT+AGG - chr4_4:44134213-44134232 None:intergenic 30.0%
CCTATTTAATTAATCAGGTC+AGG + chr4_4:44134210-44134229 Msa0682500:intron 30.0%
ATATGAAAAGCTTAATAGGC+CGG - chr4_4:44134272-44134291 None:intergenic 30.0%
CAAACATATTTGTGTGCTTT+AGG + chr4_4:44134421-44134440 Msa0682500:intron 30.0%
TCTTGAAGTAACATGATTAG+GGG - chr4_4:44134674-44134693 None:intergenic 30.0%
CTCTTGAAGTAACATGATTA+GGG - chr4_4:44134675-44134694 None:intergenic 30.0%
ACTCTTGAAGTAACATGATT+AGG - chr4_4:44134676-44134695 None:intergenic 30.0%
!!! TAAGTTTGCTATTTTTGCCA+AGG + chr4_4:44134843-44134862 Msa0682500:intron 30.0%
!!! AAGTTTGCTATTTTTGCCAA+GGG + chr4_4:44134844-44134863 Msa0682500:intron 30.0%
TTAATGCTATATGCCATTGA+GGG - chr4_4:44134901-44134920 None:intergenic 30.0%
TTTAATGCTATATGCCATTG+AGG - chr4_4:44134902-44134921 None:intergenic 30.0%
! TTTCATGAACCTTTTCTTCT+TGG - chr4_4:44135089-44135108 None:intergenic 30.0%
GGTTCATGAAATATTGGATA+TGG + chr4_4:44135098-44135117 Msa0682500:CDS 30.0%
ATGGTAAATAATAGGCCAAA+CGG + chr4_4:44135117-44135136 Msa0682500:CDS 30.0%
AAACATTGTATTACCTTGGA+AGG - chr4_4:44135171-44135190 None:intergenic 30.0%
AGGTAAACATTGTATTACCT+TGG - chr4_4:44135175-44135194 None:intergenic 30.0%
GAAAGAAAACAAGAAAGTCA+AGG - chr4_4:44135211-44135230 None:intergenic 30.0%
CACACTATGAAAATTTAGCT+AGG - chr4_4:44135234-44135253 None:intergenic 30.0%
! ACATTTGAAACTCCATGTTA+GGG - chr4_4:44135370-44135389 None:intergenic 30.0%
! AACATTTGAAACTCCATGTT+AGG - chr4_4:44135371-44135390 None:intergenic 30.0%
TTCATCATCACTTAGTAGTT+TGG + chr4_4:44135390-44135409 Msa0682500:intron 30.0%
ACATTGTTGTAATGGTTTGA+AGG - chr4_4:44135417-44135436 None:intergenic 30.0%
CAAAAAAAGCCGATATTGTT+AGG + chr4_4:44135497-44135516 Msa0682500:intron 30.0%
AACATCCAACCTAACAATAT+CGG - chr4_4:44135509-44135528 None:intergenic 30.0%
!! AGTTTGAAGAGTGCTAATTT+GGG - chr4_4:44135694-44135713 None:intergenic 30.0%
! AAGTCAAAAATTTGGAACCA+AGG + chr4_4:44135750-44135769 Msa0682500:CDS 30.0%
! AGTCAAAAATTTGGAACCAA+GGG + chr4_4:44135751-44135770 Msa0682500:CDS 30.0%
TAGTAATGTTCATGAAAGGA+TGG + chr4_4:44135848-44135867 Msa0682500:CDS 30.0%
! GCAGAAAGAAAATAGTTTTC+AGG + chr4_4:44135980-44135999 Msa0682500:CDS 30.0%
!! GAAAGAAAATAGTTTTCAGG+AGG + chr4_4:44135983-44136002 Msa0682500:CDS 30.0%
GAAAGAGTTACTAGGAAAAA+TGG + chr4_4:44136020-44136039 Msa0682500:CDS 30.0%
CACGAATAAACTGGAAAATT+CGG - chr4_4:44136107-44136126 None:intergenic 30.0%
ACATACATACACGAATAAAC+TGG - chr4_4:44136116-44136135 None:intergenic 30.0%
ATAATAAGATGGATGTTCGA+GGG - chr4_4:44136246-44136265 None:intergenic 30.0%
TATAATAAGATGGATGTTCG+AGG - chr4_4:44136247-44136266 None:intergenic 30.0%
AGGCTATAGACATTAGAAAT+TGG - chr4_4:44136296-44136315 None:intergenic 30.0%
! AGTGATTGGTTGCAAATATT+AGG - chr4_4:44136463-44136482 None:intergenic 30.0%
!! ATGCTTTCAGATAACTTGTT+TGG - chr4_4:44136592-44136611 None:intergenic 30.0%
TCTGAATCAAAGATACCATA+TGG - chr4_4:44136799-44136818 None:intergenic 30.0%
AACATAACCAGATTCTTGTA+AGG - chr4_4:44136847-44136866 None:intergenic 30.0%
! TATGTTCACTTCAAGTTCTA+TGG + chr4_4:44136861-44136880 Msa0682500:CDS 30.0%
CTTGCAAATTTCTCAACATT+TGG - chr4_4:44137108-44137127 None:intergenic 30.0%
TTATGTTTCTTGTGGTTTAC+AGG + chr4_4:44137143-44137162 Msa0682500:intron 30.0%
! CAATCCAATTAACTTTTCTG+AGG - chr4_4:44137378-44137397 None:intergenic 30.0%
! GAATTGAATTGCTATTGTGT+AGG + chr4_4:44138052-44138071 Msa0682500:intron 30.0%
AGATGCTTCTAATATGAAAG+AGG + chr4_4:44138142-44138161 Msa0682500:CDS 30.0%
ACAATGTTGCAATATGCTTT+AGG + chr4_4:44138262-44138281 Msa0682500:intron 30.0%
GTGGTATAATGTGTATGTTT+GGG - chr4_4:44138428-44138447 None:intergenic 30.0%
TGTGGTATAATGTGTATGTT+TGG - chr4_4:44138429-44138448 None:intergenic 30.0%
AAACATACACATTATACCAC+AGG + chr4_4:44138428-44138447 Msa0682500:intron 30.0%
TCATTGCATAACTTATGCAA+GGG - chr4_4:44138593-44138612 None:intergenic 30.0%
TTCATTGCATAACTTATGCA+AGG - chr4_4:44138594-44138613 None:intergenic 30.0%
GCTATCTATAATTGTGTGTT+TGG + chr4_4:44138670-44138689 Msa0682500:intron 30.0%
AAGTGTGTTAGGTTACATAT+TGG + chr4_4:44138762-44138781 Msa0682500:intron 30.0%
ATATGCATTATATTCAGGTG+AGG + chr4_4:44139036-44139055 Msa0682500:intron 30.0%
CAAAATCAAGCATGTTTCTT+AGG - chr4_4:44139172-44139191 None:intergenic 30.0%
!! ATATTGATTCACTTGTGGAA+TGG + chr4_4:44139198-44139217 Msa0682500:CDS 30.0%
!! TATTGATTCACTTGTGGAAT+GGG + chr4_4:44139199-44139218 Msa0682500:CDS 30.0%
!! ATAGGGTATCTTTTCAACAA+TGG - chr4_4:44139312-44139331 None:intergenic 30.0%
AGTTTGACTATCAATTAGAC+CGG - chr4_4:44139474-44139493 None:intergenic 30.0%
GATAAAAACCGTCTTTGTTG+TGG - chr4_4:44132962-44132981 None:intergenic 35.0%
GTTATGTGTTGAAGTTGAGA+GGG - chr4_4:44133044-44133063 None:intergenic 35.0%
AGTTATGTGTTGAAGTTGAG+AGG - chr4_4:44133045-44133064 None:intergenic 35.0%
CAATGTTAAAACAACATGGG+GGG - chr4_4:44133141-44133160 None:intergenic 35.0%
ATATTGCGGTAAAATGTGGT+TGG + chr4_4:44133426-44133445 Msa0682500:intron 35.0%
GATTAAGAATTGTTCCATCG+AGG + chr4_4:44133496-44133515 Msa0682500:intron 35.0%
GAAAGAGGAACTTGAAAAAG+AGG + chr4_4:44133649-44133668 Msa0682500:CDS 35.0%
AGTGACATATATAGAGGAGA+GGG + chr4_4:44134066-44134085 Msa0682500:intron 35.0%
ACCTTGTTAATAAACGAGCT+GGG - chr4_4:44134168-44134187 None:intergenic 35.0%
! TCAGGCTCAAGCTTTTTATA+AGG + chr4_4:44134187-44134206 Msa0682500:intron 35.0%
TAATTAATCAGGTCAGGCTA+AGG + chr4_4:44134216-44134235 Msa0682500:intron 35.0%
AAAAAGCCTATTAAGCCCAT+CGG + chr4_4:44134245-44134264 Msa0682500:intron 35.0%
AACACAAGCCTTCATATGAT+TGG + chr4_4:44134338-44134357 Msa0682500:intron 35.0%
TGTAAGCCTACTCCTATATA+GGG - chr4_4:44134462-44134481 None:intergenic 35.0%
ATGTAAGCCTACTCCTATAT+AGG - chr4_4:44134463-44134482 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + chr4_4:44134508-44134527 Msa0682500:intron 35.0%
TAATGCTATATGCCATTGAG+GGG - chr4_4:44134900-44134919 None:intergenic 35.0%
ATAGATATAGCTGAACCGTT+TGG - chr4_4:44135135-44135154 None:intergenic 35.0%
! TCCTAATTTTCTTCCTTCCA+AGG + chr4_4:44135155-44135174 Msa0682500:CDS 35.0%
ACCTTGGAAGGAAGAAAATT+AGG - chr4_4:44135159-44135178 None:intergenic 35.0%
AGTCTTCTTACATGCATGTA+TGG - chr4_4:44135337-44135356 None:intergenic 35.0%
!!! CTTTTTTTGCCAGTTGAACT+AGG - chr4_4:44135486-44135505 None:intergenic 35.0%
AAAAGCCGATATTGTTAGGT+TGG + chr4_4:44135501-44135520 Msa0682500:intron 35.0%
!! GTTAGGTTGGATGTTATGAT+CGG + chr4_4:44135514-44135533 Msa0682500:intron 35.0%
!! TTAGGTTGGATGTTATGATC+GGG + chr4_4:44135515-44135534 Msa0682500:intron 35.0%
!! CAGTTTGAAGAGTGCTAATT+TGG - chr4_4:44135695-44135714 None:intergenic 35.0%
CAAATTAGCACTCTTCAAAC+TGG + chr4_4:44135693-44135712 Msa0682500:CDS 35.0%
GCAGTAGTAATGTTCATGAA+AGG + chr4_4:44135844-44135863 Msa0682500:CDS 35.0%
! AAGGATGGCATTTGAAACAA+AGG + chr4_4:44135863-44135882 Msa0682500:CDS 35.0%
TCTAATGTCTATAGCCTATG+TGG + chr4_4:44136299-44136318 Msa0682500:intron 35.0%
GCTGAAAATAGTACAGTGAT+TGG - chr4_4:44136477-44136496 None:intergenic 35.0%
! ACTGTACTATTTTCAGCTGA+GGG + chr4_4:44136480-44136499 Msa0682500:intron 35.0%
TCATTCTCTTCTGATAGAAG+TGG - chr4_4:44136556-44136575 None:intergenic 35.0%
AACATCAAGAGCAATGGAAT+TGG + chr4_4:44136651-44136670 Msa0682500:CDS 35.0%
GCAATGGAATTGGAAAAATC+AGG + chr4_4:44136661-44136680 Msa0682500:CDS 35.0%
AAAAATCAGGACCAGTTTCA+AGG + chr4_4:44136674-44136693 Msa0682500:CDS 35.0%
! CAACATAAGACTTGGTTTCT+GGG - chr4_4:44136752-44136771 None:intergenic 35.0%
TTATGTTGCACAAGGAATCA+AGG + chr4_4:44136764-44136783 Msa0682500:CDS 35.0%
TATTGGTCCTTACAAGAATC+TGG + chr4_4:44136837-44136856 Msa0682500:CDS 35.0%
GAAGGGCTTGATATAAACTT+TGG - chr4_4:44136889-44136908 None:intergenic 35.0%
! TTAGTAACGGAATAGACGAA+GGG - chr4_4:44136906-44136925 None:intergenic 35.0%
!! CTTCAGACAGTTGATTTGAA+AGG + chr4_4:44137181-44137200 Msa0682500:CDS 35.0%
!!! ATTAACTTTTCTGAGGTGGA+TGG - chr4_4:44137371-44137390 None:intergenic 35.0%
TCCACCTCAGAAAAGTTAAT+TGG + chr4_4:44137371-44137390 Msa0682500:CDS 35.0%
!! TCCAATTAACTTTTCTGAGG+TGG - chr4_4:44137375-44137394 None:intergenic 35.0%
CGACACTTGTCATTATATCA+TGG - chr4_4:44137474-44137493 None:intergenic 35.0%
TGCTTATAATAGTGACTGGA+GGG - chr4_4:44137544-44137563 None:intergenic 35.0%
TTGCTTATAATAGTGACTGG+AGG - chr4_4:44137545-44137564 None:intergenic 35.0%
TCAGTTGTACGTGAACTTTA+TGG + chr4_4:44138317-44138336 Msa0682500:CDS 35.0%
CAGTTGTACGTGAACTTTAT+GGG + chr4_4:44138318-44138337 Msa0682500:CDS 35.0%
ACTTTATGGGCTTGAATTTG+TGG + chr4_4:44138331-44138350 Msa0682500:CDS 35.0%
GAATAGAATAAGCAAACCTG+TGG - chr4_4:44138447-44138466 None:intergenic 35.0%
ATATTGATCTAGTAGCACAG+TGG + chr4_4:44138506-44138525 Msa0682500:intron 35.0%
ATTGCACAACATTTAAAGGC+TGG + chr4_4:44138648-44138667 Msa0682500:intron 35.0%
!!! TTGGTTTTACCATTCTCACA+AGG + chr4_4:44138781-44138800 Msa0682500:intron 35.0%
CTATCTTCAAGCTTCAATTC+TGG + chr4_4:44139109-44139128 Msa0682500:CDS 35.0%
CAACTAGCAACAAAAGGATA+GGG + chr4_4:44139132-44139151 Msa0682500:CDS 35.0%
ATGTTTCTTAGGAGAAGTTC+TGG - chr4_4:44139161-44139180 None:intergenic 35.0%
! AAACATGCTTGATTTTGCTG+TGG + chr4_4:44139175-44139194 Msa0682500:CDS 35.0%
!! TGTGGATATTGATTCACTTG+TGG + chr4_4:44139193-44139212 Msa0682500:CDS 35.0%
AATCAATGGTTGAATGCTTC+AGG + chr4_4:44139258-44139277 Msa0682500:CDS 35.0%
ATCAATGGTTGAATGCTTCA+GGG + chr4_4:44139259-44139278 Msa0682500:CDS 35.0%
ATTAGACCGGCTATAATAGA+TGG - chr4_4:44139461-44139480 None:intergenic 35.0%
ACTCACAACCACAACAAAGA+CGG + chr4_4:44132951-44132970 Msa0682500:CDS 40.0%
AGAAGATGATGACACAAGCT+TGG - chr4_4:44133083-44133102 None:intergenic 40.0%
!! TTTCATGTTTGGCTCTTCCA+TGG + chr4_4:44133177-44133196 Msa0682500:CDS 40.0%
CTAGTAGCTTCTCACAAACA+TGG - chr4_4:44133338-44133357 None:intergenic 40.0%
TAAAATGTGGTTGGCATGAC+TGG + chr4_4:44133435-44133454 Msa0682500:intron 40.0%
TTCCATCGAGGATTGCAATA+TGG + chr4_4:44133508-44133527 Msa0682500:intron 40.0%
AACCATATTGCAATCCTCGA+TGG - chr4_4:44133513-44133532 None:intergenic 40.0%
GAGTGACATATATAGAGGAG+AGG + chr4_4:44134065-44134084 Msa0682500:intron 40.0%
AGTTAGGCCTTAAATAGGCT+AGG - chr4_4:44134142-44134161 None:intergenic 40.0%
! AGCCTATTTAAGGCCTAACT+CGG + chr4_4:44134142-44134161 Msa0682500:intron 40.0%
GACCTTGTTAATAAACGAGC+TGG - chr4_4:44134169-44134188 None:intergenic 40.0%
GCTCGTTTATTAACAAGGTC+AGG + chr4_4:44134169-44134188 Msa0682500:intron 40.0%
AAAAGCCTATTAAGCCCATC+GGG + chr4_4:44134246-44134265 Msa0682500:intron 40.0%
! GTTTTGCCCTATATAGGAGT+AGG + chr4_4:44134453-44134472 Msa0682500:intron 40.0%
GTCAGGCCTTAGCATAAAAT+AGG + chr4_4:44134488-44134507 Msa0682500:intron 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG + chr4_4:44134530-44134549 Msa0682500:intron 40.0%
!!! AGGCCTAGCATTTTTGAAGT+AGG + chr4_4:44134602-44134621 Msa0682500:intron 40.0%
TGGCCTACTTCAAAAATGCT+AGG - chr4_4:44134608-44134627 None:intergenic 40.0%
!!! TAGCATTTTTGAAGTAGGCC+AGG + chr4_4:44134607-44134626 Msa0682500:intron 40.0%
ACATGATTAGGGGTGGAAAT+GGG - chr4_4:44134664-44134683 None:intergenic 40.0%
AACATGATTAGGGGTGGAAA+TGG - chr4_4:44134665-44134684 None:intergenic 40.0%
TGAAGTAACATGATTAGGGG+TGG - chr4_4:44134671-44134690 None:intergenic 40.0%
! GTGTCATTCTCCTTTCCAAA+AGG + chr4_4:44134756-44134775 Msa0682500:intron 40.0%
!! TCAGTCATAGCCTTTTGGAA+AGG - chr4_4:44134769-44134788 None:intergenic 40.0%
! TGAACTCAGTCATAGCCTTT+TGG - chr4_4:44134774-44134793 None:intergenic 40.0%
ACTATTATTGTCCTCTCCCT+TGG - chr4_4:44134863-44134882 None:intergenic 40.0%
AACAGGTCACTATGCTTCAA+AGG + chr4_4:44135055-44135074 Msa0682500:intron 40.0%
!!! CTTTTAGAACCACCCTAACA+TGG + chr4_4:44135355-44135374 Msa0682500:intron 40.0%
! TTTGAAACTCCATGTTAGGG+TGG - chr4_4:44135367-44135386 None:intergenic 40.0%
! TAGGTTGGATGTTATGATCG+GGG + chr4_4:44135516-44135535 Msa0682500:intron 40.0%
GACAAAATGACGAAATGCCA+GGG - chr4_4:44135548-44135567 None:intergenic 40.0%
AGACAAAATGACGAAATGCC+AGG - chr4_4:44135549-44135568 None:intergenic 40.0%
ATTGTTAGCAGAGCTAGTCA+TGG + chr4_4:44135641-44135660 Msa0682500:CDS 40.0%
ACACGAACAAGAAATCACCA+AGG + chr4_4:44135722-44135741 Msa0682500:CDS 40.0%
TTGGAACCAAGGGAATTTGA+TGG + chr4_4:44135761-44135780 Msa0682500:CDS 40.0%
TGGAACCAAGGGAATTTGAT+GGG + chr4_4:44135762-44135781 Msa0682500:CDS 40.0%
AATTGCCCATCAAATTCCCT+TGG - chr4_4:44135770-44135789 None:intergenic 40.0%
CTGCTTCTTTGAACAGAACT+AGG - chr4_4:44135828-44135847 None:intergenic 40.0%
AAATTCGGTCTGCATACCTT+AGG - chr4_4:44136092-44136111 None:intergenic 40.0%
GTCTAAGTTGCGACTAACTT+CGG - chr4_4:44136347-44136366 None:intergenic 40.0%
ATCAAGTCTATGTGGTACAC+AGG - chr4_4:44136369-44136388 None:intergenic 40.0%
! CACTGTACTATTTTCAGCTG+AGG + chr4_4:44136479-44136498 Msa0682500:intron 40.0%
TGCACTTAGATCTTCCAACT+AGG + chr4_4:44136518-44136537 Msa0682500:CDS 40.0%
CAGAAGAGAATGACCTAAAG+TGG + chr4_4:44136563-44136582 Msa0682500:CDS 40.0%
!! ACTTGTTTGGTTGCCACTTT+AGG - chr4_4:44136579-44136598 None:intergenic 40.0%
ACTCAGAACATCAAGAGCAA+TGG + chr4_4:44136645-44136664 Msa0682500:CDS 40.0%
GAATGCAAAGACCTTGAAAC+TGG - chr4_4:44136688-44136707 None:intergenic 40.0%
! GCAACATAAGACTTGGTTTC+TGG - chr4_4:44136753-44136772 None:intergenic 40.0%
! ACCAAGTCTTATGTTGCACA+AGG + chr4_4:44136756-44136775 Msa0682500:CDS 40.0%
TCCTTGTGCAACATAAGACT+TGG - chr4_4:44136760-44136779 None:intergenic 40.0%
ATTCAGAAGAGTCCATTCCT+AGG + chr4_4:44136812-44136831 Msa0682500:CDS 40.0%
TTCAGAAGAGTCCATTCCTA+GGG + chr4_4:44136813-44136832 Msa0682500:CDS 40.0%
TTGTAAGGACCAATATCCCT+AGG - chr4_4:44136832-44136851 None:intergenic 40.0%
! CTTAGTAACGGAATAGACGA+AGG - chr4_4:44136907-44136926 None:intergenic 40.0%
CAATATCAAACATCGCACTG+CGG - chr4_4:44136981-44137000 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4_4:44137660-44137679 Msa0682500:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4_4:44137661-44137680 Msa0682500:intron 40.0%
CTACTAAAACTTACTCCCTC+CGG - chr4_4:44137679-44137698 None:intergenic 40.0%
TATGTTGCCTCCTATGTTGA+GGG - chr4_4:44138081-44138100 None:intergenic 40.0%
TTATGTTGCCTCCTATGTTG+AGG - chr4_4:44138082-44138101 None:intergenic 40.0%
! GCAATATGCTTTAGGCACAA+AGG + chr4_4:44138270-44138289 Msa0682500:intron 40.0%
! TATGCTTTAGGCACAAAGGA+AGG + chr4_4:44138274-44138293 Msa0682500:intron 40.0%
! ATGCTTTAGGCACAAAGGAA+GGG + chr4_4:44138275-44138294 Msa0682500:intron 40.0%
CAGAGAGCAAATGTGACATT+TGG - chr4_4:44138359-44138378 None:intergenic 40.0%
TTAAAGACGCCTTGTGAGAA+TGG - chr4_4:44138793-44138812 None:intergenic 40.0%
ATTCAGGTGAGGATATACAC+AGG + chr4_4:44139047-44139066 Msa0682500:intron 40.0%
TTCTGGCAACTAGCAACAAA+AGG + chr4_4:44139126-44139145 Msa0682500:CDS 40.0%
GCAACTAGCAACAAAAGGAT+AGG + chr4_4:44139131-44139150 Msa0682500:CDS 40.0%
! AGGGACTCTAAGGAAATCAA+TGG + chr4_4:44139244-44139263 Msa0682500:CDS 40.0%
TCAATGGTTGAATGCTTCAG+GGG + chr4_4:44139260-44139279 Msa0682500:CDS 40.0%
ACCGGCTATAATAGATGGAA+GGG - chr4_4:44139456-44139475 None:intergenic 40.0%
! TTTGTTGTGGTTGTGAGTGC+TGG - chr4_4:44132949-44132968 None:intergenic 45.0%
! GAAGTTGAGAGGGACTTTTC+AGG - chr4_4:44133034-44133053 None:intergenic 45.0%
!! TAACGGGCTGCAAAAGAAAG+AGG + chr4_4:44133634-44133653 Msa0682500:CDS 45.0%
AGAGGAGAGGGATCATGTTT+AGG + chr4_4:44134078-44134097 Msa0682500:intron 45.0%
GAGGAGAGGGATCATGTTTA+GGG + chr4_4:44134079-44134098 Msa0682500:intron 45.0%
AGGAGAGGGATCATGTTTAG+GGG + chr4_4:44134080-44134099 Msa0682500:intron 45.0%
TCATGTTTAGGGGTGGGAAT+AGG + chr4_4:44134090-44134109 Msa0682500:intron 45.0%
GCCCAGCTCGTTTATTAACA+AGG + chr4_4:44134164-44134183 Msa0682500:intron 45.0%
GTAGGCTTACATGTGTTGTC+AGG + chr4_4:44134471-44134490 Msa0682500:intron 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr4_4:44134518-44134537 Msa0682500:intron 45.0%
! ATCAGGCCTTTAAAAAGGCC+AGG + chr4_4:44134535-44134554 Msa0682500:intron 45.0%
CCTCGAAAATGAGCCTATGA+CGG + chr4_4:44134563-44134582 Msa0682500:intron 45.0%
CTCGAAAATGAGCCTATGAC+GGG + chr4_4:44134564-44134583 Msa0682500:intron 45.0%
!! ATGAGCCTATGACGGGTAAT+AGG + chr4_4:44134571-44134590 Msa0682500:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG + chr4_4:44134613-44134632 Msa0682500:intron 45.0%
!!! TGCTATTTTTGCCAAGGGAG+AGG + chr4_4:44134849-44134868 Msa0682500:intron 45.0%
CACTATGCTTCAAAGGTTGC+TGG + chr4_4:44135062-44135081 Msa0682500:CDS 45.0%
GTTGCTGGACCAAGAAGAAA+AGG + chr4_4:44135077-44135096 Msa0682500:CDS 45.0%
TCCACAAGTCCTAGTTCAAC+TGG + chr4_4:44135474-44135493 Msa0682500:intron 45.0%
!! TGCATACCTTAGGTGATGGA+TGG - chr4_4:44136082-44136101 None:intergenic 45.0%
AAGTTGCGACTAACTTCGGT+CGG - chr4_4:44136343-44136362 None:intergenic 45.0%
CTTTAAGCTCGAGAAGCTTC+CGG + chr4_4:44136710-44136729 Msa0682500:CDS 45.0%
TTTAAGCTCGAGAAGCTTCC+GGG + chr4_4:44136711-44136730 Msa0682500:CDS 45.0%
TCAAGGCAGCAAGATCCATA+TGG + chr4_4:44136781-44136800 Msa0682500:CDS 45.0%
GAGTCCATTCCTAGGGATAT+TGG + chr4_4:44136820-44136839 Msa0682500:CDS 45.0%
AGGACCAATATCCCTAGGAA+TGG - chr4_4:44136827-44136846 None:intergenic 45.0%
GACCACAATTGAGGTTGCAT+CGG - chr4_4:44137027-44137046 None:intergenic 45.0%
TGAGACGCTAGAATGAGTAC+AGG - chr4_4:44137444-44137463 None:intergenic 45.0%
TGTACTCATTCTAGCGTCTC+AGG + chr4_4:44137443-44137462 Msa0682500:intron 45.0%
! TGCTTTAGGCACAAAGGAAG+GGG + chr4_4:44138276-44138295 Msa0682500:intron 45.0%
GTCACATTTGCTCTCTGTAG+TGG + chr4_4:44138362-44138381 Msa0682500:CDS 45.0%
TGTGTATGTTTGGGTGTGTG+AGG - chr4_4:44138419-44138438 None:intergenic 45.0%
TGATCTAGTAGCACAGTGGT+TGG + chr4_4:44138510-44138529 Msa0682500:intron 45.0%
TGCATAACTTATGCAAGGGC+CGG - chr4_4:44138589-44138608 None:intergenic 45.0%
TACCTACTTCAGGGACTCTA+AGG + chr4_4:44139234-44139253 Msa0682500:CDS 45.0%
TTCCTTAGAGTCCCTGAAGT+AGG - chr4_4:44139239-44139258 None:intergenic 45.0%
TGGAAGGGGACAATTCTAGA+TGG - chr4_4:44139441-44139460 None:intergenic 45.0%
CCGGCTATAATAGATGGAAG+GGG - chr4_4:44139455-44139474 None:intergenic 45.0%
CCCCTTCCATCTATTATAGC+CGG + chr4_4:44139452-44139471 Msa0682500:three_prime_UTR 45.0%
GACCGGCTATAATAGATGGA+AGG - chr4_4:44139457-44139476 None:intergenic 45.0%
!!! TATTTATATATATTTTTTCT+TGG + chr4_4:44133691-44133710 Msa0682500:intron 5.0%
!!! CATTTAAAATTTTAAAATTT+TGG + chr4_4:44137294-44137313 Msa0682500:intron 5.0%
!!! TTAATATATTTTTTTGTTAT+AGG + chr4_4:44137325-44137344 Msa0682500:intron 5.0%
!!! TAATATATTTTTTTGTTATA+GGG + chr4_4:44137326-44137345 Msa0682500:intron 5.0%
!!! AATAACTTTTTTTTAATATA+AGG + chr4_4:44137731-44137750 Msa0682500:intron 5.0%
!!! AAAATTAAATTTTCTTTATT+CGG + chr4_4:44137853-44137872 Msa0682500:intron 5.0%
!! TTGTGAGTGCTGGTAGGAGT+GGG - chr4_4:44132939-44132958 None:intergenic 50.0%
!! TTGTGGTTGTGAGTGCTGGT+AGG - chr4_4:44132945-44132964 None:intergenic 50.0%
AAACAACATGGGGGGCTAAG+AGG - chr4_4:44133133-44133152 None:intergenic 50.0%
AGAGGGATCATGTTTAGGGG+TGG + chr4_4:44134083-44134102 Msa0682500:intron 50.0%
GAGGGATCATGTTTAGGGGT+GGG + chr4_4:44134084-44134103 Msa0682500:intron 50.0%
CCTTAAATAGGCTAGGCCGT+AGG - chr4_4:44134135-44134154 None:intergenic 50.0%
CCTACGGCCTAGCCTATTTA+AGG + chr4_4:44134132-44134151 Msa0682500:intron 50.0%
GGCCGAGTTAGGCCTTAAAT+AGG - chr4_4:44134147-44134166 None:intergenic 50.0%
!! ATAGGCTCATTTTCGAGGCC+TGG - chr4_4:44134561-44134580 None:intergenic 50.0%
! CCGTCATAGGCTCATTTTCG+AGG - chr4_4:44134566-44134585 None:intergenic 50.0%
CCTGACCTATTACCCGTCAT+AGG - chr4_4:44134579-44134598 None:intergenic 50.0%
!! CCTATGACGGGTAATAGGTC+AGG + chr4_4:44134576-44134595 Msa0682500:intron 50.0%
! ATTAGGGGTGGAAATGGGCT+AGG - chr4_4:44134659-44134678 None:intergenic 50.0%
ATGAGAACCATGCCCCTCAA+TGG + chr4_4:44134885-44134904 Msa0682500:intron 50.0%
CTATATGCCATTGAGGGGCA+TGG - chr4_4:44134895-44134914 None:intergenic 50.0%
GCCAGTTGAACTAGGACTTG+TGG - chr4_4:44135478-44135497 None:intergenic 50.0%
TATGATCGGGGTTCAAACCC+TGG + chr4_4:44135528-44135547 Msa0682500:intron 50.0%
GGTCTGCATACCTTAGGTGA+TGG - chr4_4:44136086-44136105 None:intergenic 50.0%
GCTAGCAACTCGATCCACAT+AGG - chr4_4:44136316-44136335 None:intergenic 50.0%
GGATCAAGCAGTGACCTAGT+TGG - chr4_4:44136535-44136554 None:intergenic 50.0%
! AGAAGCTTCCGGGTCGATTT+GGG + chr4_4:44136721-44136740 Msa0682500:CDS 50.0%
GACCGATGCAACCTCAATTG+TGG + chr4_4:44137022-44137041 Msa0682500:intron 50.0%
AAGGTCTGCGACCACAATTG+AGG - chr4_4:44137036-44137055 None:intergenic 50.0%
GTGTAGGCAACCCTCAACAT+AGG + chr4_4:44138068-44138087 Msa0682500:intron 50.0%
TAGGCAACCCTCAACATAGG+AGG + chr4_4:44138071-44138090 Msa0682500:intron 50.0%
! GCTTTAGGCACAAAGGAAGG+GGG + chr4_4:44138277-44138296 Msa0682500:intron 50.0%
TGAGGAGGTGAACTTACAGC+TGG - chr4_4:44138401-44138420 None:intergenic 50.0%
GTATGTTTGGGTGTGTGAGG+AGG - chr4_4:44138416-44138435 None:intergenic 50.0%
! ATGTGAAGAAGTGGGGTGTC+CGG + chr4_4:44138553-44138572 Msa0682500:intron 50.0%
CATAACTTATGCAAGGGCCG+GGG - chr4_4:44138587-44138606 None:intergenic 50.0%
GCATAACTTATGCAAGGGCC+GGG - chr4_4:44138588-44138607 None:intergenic 50.0%
GTGAGGATATACACAGGCGA+TGG + chr4_4:44139053-44139072 Msa0682500:CDS 50.0%
TGCAGCCAGTTACCTACTTC+AGG + chr4_4:44139224-44139243 Msa0682500:CDS 50.0%
GCAGCCAGTTACCTACTTCA+GGG + chr4_4:44139225-44139244 Msa0682500:CDS 50.0%
GAGTCCCTGAAGTAGGTAAC+TGG - chr4_4:44139232-44139251 None:intergenic 50.0%
GTTGAATGCTTCAGGGGTCA+GGG + chr4_4:44139266-44139285 Msa0682500:CDS 50.0%
!! GTTGTGAGTGCTGGTAGGAG+TGG - chr4_4:44132940-44132959 None:intergenic 55.0%
TTTAGGGGTGGGAATAGGCC+AGG + chr4_4:44134095-44134114 Msa0682500:intron 55.0%
TAAACGAGCTGGGCCGAGTT+AGG - chr4_4:44134158-44134177 None:intergenic 55.0%
! GCCTTTAAAAAGGCCAGGCC+AGG + chr4_4:44134540-44134559 Msa0682500:intron 55.0%
!! GCCTGGCCTGGCCTTTTTAA+AGG - chr4_4:44134544-44134563 None:intergenic 55.0%
ACGGGTAATAGGTCAGGCTC+AGG + chr4_4:44134582-44134601 Msa0682500:intron 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG - chr4_4:44134628-44134647 None:intergenic 55.0%
GGCTTAGGCCTTACAAAGCC+CGG + chr4_4:44134628-44134647 Msa0682500:intron 55.0%
!! ACCTTAGGTGATGGATGGCG+CGG - chr4_4:44136077-44136096 None:intergenic 55.0%
GAGAAGCTTCCGGGTCGATT+TGG + chr4_4:44136720-44136739 Msa0682500:CDS 55.0%
! TGTGAAGAAGTGGGGTGTCC+GGG + chr4_4:44138554-44138573 Msa0682500:intron 55.0%
GGTTGAATGCTTCAGGGGTC+AGG + chr4_4:44139265-44139284 Msa0682500:CDS 55.0%
! GGGTCAGGGTGGTAATGTCA+AGG + chr4_4:44139280-44139299 Msa0682500:CDS 55.0%
GCCTATTAAGCCCATCGGGC+CGG + chr4_4:44134250-44134269 Msa0682500:intron 60.0%
GCTTAATAGGCCGGCCCGAT+GGG - chr4_4:44134263-44134282 None:intergenic 60.0%
AGCTTAATAGGCCGGCCCGA+TGG - chr4_4:44134264-44134283 None:intergenic 60.0%
!! CTCATTTTCGAGGCCTGGCC+TGG - chr4_4:44134556-44134575 None:intergenic 60.0%
!! CCTTAGGTGATGGATGGCGC+GGG - chr4_4:44136076-44136095 None:intergenic 60.0%
GGGTCGATCCCAAATCGACC+CGG - chr4_4:44136732-44136751 None:intergenic 60.0%
AGGCACAAAGGAAGGGGGAG+TGG + chr4_4:44138282-44138301 Msa0682500:intron 60.0%
GGCACAAAGGAAGGGGGAGT+GGG + chr4_4:44138283-44138302 Msa0682500:intron 60.0%
! GTGAAGAAGTGGGGTGTCCG+GGG + chr4_4:44138555-44138574 Msa0682500:intron 60.0%
GAATGCTTCAGGGGTCAGGG+TGG + chr4_4:44139269-44139288 Msa0682500:CDS 60.0%
AATAGGCCAGGCCGTCCGAC+AGG + chr4_4:44134107-44134126 Msa0682500:intron 65.0%
ATAGGCCAGGCCGTCCGACA+GGG + chr4_4:44134108-44134127 Msa0682500:intron 65.0%
! GCCGGCCCGATGGGCTTAAT+AGG - chr4_4:44134254-44134273 None:intergenic 65.0%
AGGCCTTACAAAGCCCGGCC+CGG + chr4_4:44134633-44134652 Msa0682500:intron 65.0%
!! GGGTGGAAATGGGCTAGGCC+GGG - chr4_4:44134654-44134673 None:intergenic 65.0%
!! GGGGTGGAAATGGGCTAGGC+CGG - chr4_4:44134655-44134674 None:intergenic 65.0%
CCCGCGCCATCCATCACCTA+AGG + chr4_4:44136073-44136092 Msa0682500:CDS 65.0%
TAGGCCAGGCCGTCCGACAG+GGG + chr4_4:44134109-44134128 Msa0682500:intron 70.0%
GCTAGGCCGTAGGCCCCTGT+CGG - chr4_4:44134125-44134144 None:intergenic 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG - chr4_4:44134639-44134658 None:intergenic 70.0%
!! GAAATGGGCTAGGCCGGGCC+GGG - chr4_4:44134649-44134668 None:intergenic 70.0%
!! GGAAATGGGCTAGGCCGGGC+CGG - chr4_4:44134650-44134669 None:intergenic 70.0%
GGGTCTCGCATAGGCGAGGG+AGG - chr4_4:44136056-44136075 None:intergenic 70.0%
CGCGGGTCTCGCATAGGCGA+GGG - chr4_4:44136059-44136078 None:intergenic 70.0%
GGATGGCGCGGGTCTCGCAT+AGG - chr4_4:44136065-44136084 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+CGG + chr4_4:44138567-44138586 Msa0682500:intron 70.0%
AAGGGCCGGGGTTCGAACCC+CGG - chr4_4:44138575-44138594 None:intergenic 70.0%
TAGGCCCCTGTCGGACGGCC+TGG - chr4_4:44134116-44134135 None:intergenic 75.0%
GGCCGTCCGACAGGGGCCTA+CGG + chr4_4:44134116-44134135 Msa0682500:intron 75.0%
GGCCGTAGGCCCCTGTCGGA+CGG - chr4_4:44134121-44134140 None:intergenic 75.0%
GCGCGGGTCTCGCATAGGCG+AGG - chr4_4:44136060-44136079 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 44132932 44139562 44132932 ID=Msa0682500;Name=Msa0682500
chr4_4 mRNA 44132932 44139562 44132932 ID=Msa0682500-mRNA-1;Parent=Msa0682500;Name=Msa0682500-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.9|1|1|1|10|198|691
chr4_4 exon 44132932 44133255 44132932 ID=Msa0682500-mRNA-1:exon:10681;Parent=Msa0682500-mRNA-1
chr4_4 exon 44133620 44133670 44133620 ID=Msa0682500-mRNA-1:exon:10682;Parent=Msa0682500-mRNA-1
chr4_4 exon 44135060 44135176 44135060 ID=Msa0682500-mRNA-1:exon:10683;Parent=Msa0682500-mRNA-1
chr4_4 exon 44135633 44136094 44135633 ID=Msa0682500-mRNA-1:exon:10684;Parent=Msa0682500-mRNA-1
chr4_4 exon 44136496 44136935 44136496 ID=Msa0682500-mRNA-1:exon:10685;Parent=Msa0682500-mRNA-1
chr4_4 exon 44137165 44137264 44137165 ID=Msa0682500-mRNA-1:exon:10686;Parent=Msa0682500-mRNA-1
chr4_4 exon 44137347 44137406 44137347 ID=Msa0682500-mRNA-1:exon:10687;Parent=Msa0682500-mRNA-1
chr4_4 exon 44138074 44138163 44138074 ID=Msa0682500-mRNA-1:exon:10688;Parent=Msa0682500-mRNA-1
chr4_4 exon 44138284 44138403 44138284 ID=Msa0682500-mRNA-1:exon:10689;Parent=Msa0682500-mRNA-1
chr4_4 exon 44139053 44139562 44139053 ID=Msa0682500-mRNA-1:exon:10690;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44132932 44133255 44132932 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44133620 44133670 44133620 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44135060 44135176 44135060 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44135633 44136094 44135633 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44136496 44136935 44136496 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44137165 44137264 44137165 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44137347 44137406 44137347 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44138074 44138163 44138074 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44138284 44138403 44138284 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 CDS 44139053 44139364 44139053 ID=Msa0682500-mRNA-1:cds;Parent=Msa0682500-mRNA-1
chr4_4 three_prime_UTR 44139365 44139562 44139365 ID=Msa0682500-mRNA-1:three_prime_utr;Parent=Msa0682500-mRNA-1
Gene Sequence

>Msa0682500

ATGTCCCACTCCTACCAGCACTCACAACCACAACAAAGACGGTTTTTATCTCAATACAATCAAAACCAACTTCATCAACAAATTTTCAATATTAATATTCCTGAAAAGTCCCTCTCAACTTCAACACATAACTTCTCTTTCTTTGGCACCAAGCTTGTGTCATCATCTTCTAACCAACATTATGAAGATGAAGAAGAACCTCTTAGCCCCCCATGTTGTTTTAACATTGTTTCTAATTCTAAGCGTTTCATGTTTGGCTCTTCCATGGATCATACTCAACTAAATCATTTCTCATCACTTATCTCTCCCTCTCACATTGATATTAGGAAAAAGAAAATTAACGGGCTGCAAAAGAAAGAGGAACTTGAAAAAGAGGTCACTATGCTTCAAAGGTTGCTGGACCAAGAAGAAAAGGTTCATGAAATATTGGATATGGTAAATAATAGGCCAAACGGTTCAGCTATATCTATTCCTAATTTTCTTCCTTCCAAGATGAGAGAATTGTTAGCAGAGCTAGTCATGGTTGAGAATGAGATAGCAAAACTTGAATCCCAAATTAGCACTCTTCAAACTGGTTTGAAACACGAACAAGAAATCACCAAGGAATCTAAGTCAAAAATTTGGAACCAAGGGAATTTGATGGGCAATTCTAACAATCACTTATCAACTTCAACAATAACAAATCCTAGTTCTGTTCAAAGAAGCAGTAGTAATGTTCATGAAAGGATGGCATTTGAAACAAAGGCATTGCATTTCATAAGTAAAGCTATCAAGGGTGATTATAATCTCAATGACTTTAGTCTCAATGAAAAAACAGGATTTTCTAAAAATTCTGTTGAGCAGAAAGAAAATAGTTTTCAGGAGGATGTTAAATTTCATGAAAGAGTTACTAGGAAAAATGGAGCAGTGAAGCCTCCCTCGCCTATGCGAGACCCGCGCCATCCATCACCTAAGCTGAGGGAACGTAATCTAGACATGCACTTAGATCTTCCAACTAGGTCACTGCTTGATCCACTTCTATCAGAAGAGAATGACCTAAAGTGGCAACCAAACAAGTTATCTGAAAGCATCATGAAGTGTTTGAATTTCATATATGTTAGACTACTCAGAACATCAAGAGCAATGGAATTGGAAAAATCAGGACCAGTTTCAAGGTCTTTGCATTCTTCTTTAAGCTCGAGAAGCTTCCGGGTCGATTTGGGATCGACCCAGAAACCAAGTCTTATGTTGCACAAGGAATCAAGGCAGCAAGATCCATATGGTATCTTTGATTCAGAAGAGTCCATTCCTAGGGATATTGGTCCTTACAAGAATCTGGTTATGTTCACTTCAAGTTCTATGGATCCAAAGTTTATATCAAGCCCTTCGTCTATTCCGTTACTAAGAAAGTTAAGGATTTTGATGAGCAATCTTCAGACAGTTGATTTGAAAGGACTTACAAATCAACAGAAATTAGCATTTTGGATCAACTTGTACAATGCTTGTATCATGCATGGATTCATTCAATATGGTGTGCCATCCACCTCAGAAAAGTTAATTGGATTGATTAACAAGGCAACCCTCAACATAGGAGGCAACATAATAAATGCTCAAGCAATAGAGCATTTTATTTTGAGGAAAAGAGATGCTTCTAATATGAAAGAGGCACAAAGGAAGGGGGAGTGGGAAGAGAAAGAATCAGTTGTACGTGAACTTTATGGGCTTGAATTTGTGGATCCAAATGTCACATTTGCTCTCTGTAGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACAGGCGATGGTGTGACAGCTGAATTAGAGAAATCAAAGCTAGACTATCTTCAAGCTTCAATTCTGGCAACTAGCAACAAAAGGATAGGGTTTCCAGAACTTCTCCTAAGAAACATGCTTGATTTTGCTGTGGATATTGATTCACTTGTGGAATGGGTGTGCAGCCAGTTACCTACTTCAGGGACTCTAAGGAAATCAATGGTTGAATGCTTCAGGGGTCAGGGTGGTAATGTCAAGGCATCAACCATTGTTGAAAAGATACCCTATGACTATGAATTTCAATATTTGTTGACAATATAA
Protein sequence

>Msa0682500

MSHSYQHSQPQQRRFLSQYNQNQLHQQIFNINIPEKSLSTSTHNFSFFGTKLVSSSSNQHYEDEEEPLSPPCCFNIVSNSKRFMFGSSMDHTQLNHFSSLISPSHIDIRKKKINGLQKKEELEKEVTMLQRLLDQEEKVHEILDMVNNRPNGSAISIPNFLPSKMRELLAELVMVENEIAKLESQISTLQTGLKHEQEITKESKSKIWNQGNLMGNSNNHLSTSTITNPSSVQRSSSNVHERMAFETKALHFISKAIKGDYNLNDFSLNEKTGFSKNSVEQKENSFQEDVKFHERVTRKNGAVKPPSPMRDPRHPSPKLRERNLDMHLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPVSRSLHSSLSSRSFRVDLGSTQKPSLMLHKESRQQDPYGIFDSEESIPRDIGPYKNLVMFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINLYNACIMHGFIQYGVPSTSEKLIGLINKATLNIGGNIINAQAIEHFILRKRDASNMKEAQRKGEWEEKESVVRELYGLEFVDPNVTFALCSGTRSSPAVRIYTGDGVTAELEKSKLDYLQASILATSNKRIGFPELLLRNMLDFAVDIDSLVEWVCSQLPTSGTLRKSMVECFRGQGGNVKASTIVEKIPYDYEFQYLLTI*