AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0695720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695720 MtrunA17_Chr4g0047301 95.405 914 40 1 1 912 1 914 0.0 1778
Msa0695720 MtrunA17_Chr2g0282211 68.943 908 260 8 22 912 22 924 0.0 1230
Msa0695720 MtrunA17_Chr1g0211131 37.311 662 353 14 294 912 428 1070 8.87e-131 419
Msa0695720 MtrunA17_Chr1g0211131 44.286 210 115 2 42 250 92 300 2.49e-44 174
Msa0695720 MtrunA17_Chr4g0009054 53.823 327 128 3 347 664 3 315 8.24e-102 320
Msa0695720 MtrunA17_Chr1g0198021 55.235 277 115 5 637 907 108 381 2.10e-98 313
Msa0695720 MtrunA17_Chr2g0317631 54.676 278 117 5 637 908 277 551 5.20e-93 307
Msa0695720 MtrunA17_Chr8g0376201 58.442 231 95 1 636 866 160 389 1.33e-91 298
Msa0695720 MtrunA17_Chr8g0360171 55.926 270 111 4 637 901 472 738 1.05e-87 296
Msa0695720 MtrunA17_Chr8g0376111 51.037 241 102 3 622 862 10 234 3.99e-76 252
Msa0695720 MtrunA17_Chr2g0317641 63.218 174 62 1 696 867 1 174 5.20e-75 243
Msa0695720 MtrunA17_Chr7g0233611 57.513 193 81 1 670 862 38 229 3.05e-72 241
Msa0695720 MtrunA17_Chr7g0222941 61.932 176 64 2 637 812 61 233 6.76e-71 234
Msa0695720 MtrunA17_Chr4g0045101 48.133 241 109 3 622 862 4 228 1.31e-70 236
Msa0695720 MtrunA17_Chr7g0233631 45.882 255 121 4 622 876 5 242 8.23e-70 234
Msa0695720 MtrunA17_Chr2g0285321 47.196 214 103 5 696 901 1 212 3.93e-51 179
Msa0695720 MtrunA17_Chr2g0317611 64.912 114 37 2 637 750 64 174 4.18e-46 163
Msa0695720 MtrunA17_Chr4g0001491 42.208 154 79 1 682 835 153 296 4.15e-32 127
Msa0695720 MtrunA17_Chr2g0317621 50.467 107 51 1 762 866 14 120 4.69e-32 124
Msa0695720 MtrunA17_Chr5g0432831 30.667 150 91 4 670 816 4 143 5.44e-14 70.5
Msa0695720 MtrunA17_Chr4g0037011 30.667 150 91 4 670 816 4 143 6.92e-14 70.1
Msa0695720 MtrunA17_Chr3g0108261 30.000 150 92 4 670 816 4 143 1.96e-13 68.6
Msa0695720 MtrunA17_Chr7g0275361 30.000 150 92 4 670 816 4 143 2.70e-13 68.2
Msa0695720 MtrunA17_Chr1g0154011 31.967 122 73 3 670 791 4 115 5.11e-12 64.7
Msa0695720 MtrunA17_Chr8g0378601 36.559 93 47 4 701 792 56 137 6.56e-12 65.1
Msa0695720 MtrunA17_Chr8g0369311 29.286 140 89 3 652 791 42 171 1.41e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695720 AT2G33770.1 48.132 910 420 14 21 906 20 901 0.0 827
Msa0695720 AT2G16920.1 38.279 674 346 17 290 912 447 1101 2.16e-129 417
Msa0695720 AT2G16920.1 39.768 259 150 4 30 283 118 375 9.53e-52 197
Msa0695720 AT2G16920.2 38.279 674 346 17 290 912 447 1101 2.16e-129 417
Msa0695720 AT2G16920.2 39.768 259 150 4 30 283 118 375 9.53e-52 197
Msa0695720 AT1G53025.1 53.875 271 117 4 637 902 244 511 6.16e-91 299
Msa0695720 AT1G53025.2 53.875 271 117 4 637 902 244 511 1.22e-90 298
Msa0695720 AT3G15355.1 56.522 230 97 2 637 866 305 531 1.61e-86 289
Msa0695720 AT1G53023.1 49.091 275 120 5 637 901 21 285 1.81e-82 268
Msa0695720 AT1G64230.2 30.667 150 91 4 670 816 4 143 6.88e-14 70.5
Msa0695720 AT1G64230.1 30.667 150 91 4 670 816 4 143 6.88e-14 70.5
Msa0695720 AT5G41700.5 30.000 150 92 4 670 816 4 143 4.35e-13 68.2
Msa0695720 AT5G41700.2 30.000 150 92 4 670 816 4 143 4.35e-13 68.2
Msa0695720 AT5G41700.1 30.000 150 92 4 670 816 4 143 4.35e-13 68.2
Msa0695720 AT4G27960.1 33.607 122 71 3 670 791 4 115 5.22e-13 67.8
Msa0695720 AT5G41700.4 30.464 151 91 5 670 816 4 144 7.14e-13 67.4
Msa0695720 AT5G53300.2 33.607 122 71 3 670 791 4 115 8.38e-13 67.4
Msa0695720 AT5G53300.4 33.607 122 71 3 670 791 4 115 8.38e-13 67.4
Msa0695720 AT5G53300.1 33.607 122 71 3 670 791 4 115 8.38e-13 67.4
Msa0695720 AT3G08690.2 29.333 150 93 4 670 816 4 143 1.98e-12 66.2
Msa0695720 AT3G08690.1 29.333 150 93 4 670 816 4 143 1.98e-12 66.2
Msa0695720 AT1G64230.3 29.560 159 90 5 670 816 4 152 2.71e-12 66.2
Msa0695720 AT4G27960.2 33.607 122 71 3 670 791 34 145 2.82e-12 66.6
Msa0695720 AT5G41700.3 27.389 157 99 3 670 826 4 145 6.97e-12 64.7
Msa0695720 AT5G56150.1 28.667 150 94 4 670 816 4 143 8.89e-12 64.3
Msa0695720 AT1G64230.5 32.500 120 68 4 700 816 76 185 1.26e-11 65.1
Msa0695720 AT1G64230.4 32.500 120 68 4 700 816 76 185 1.26e-11 65.1
Msa0695720 AT2G16740.1 32.787 122 72 3 670 791 4 115 2.02e-11 63.2

Find 305 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTCTATCAGGTTTATT+TGG 0.135335 4_4:-65393474 None:intergenic
TCTTACACTTACTCATAAAT+AGG 0.150905 4_4:-65392530 None:intergenic
CGCTGTGTTGGCACTGTTAT+TGG 0.163936 4_4:+65395807 Msa0695720:CDS
TTATAAACACACATGAATTT+TGG 0.167148 4_4:+65395409 Msa0695720:CDS
TAAAGTAAGGCTTCTCATTA+AGG 0.222829 4_4:-65398190 None:intergenic
GTGGACTTGGAAAATGTTAA+AGG 0.236097 4_4:+65394685 Msa0695720:CDS
TTCCCTGATTCATATAAATT+AGG 0.237543 4_4:-65398062 None:intergenic
CTTCATATCCAGAAGTTATT+AGG 0.238791 4_4:+65396846 Msa0695720:CDS
TATGAGTAAGTGTAAGAAAA+AGG 0.242511 4_4:+65392536 Msa0695720:five_prime_UTR
TCATTATCCATTTCAAATTT+AGG 0.243628 4_4:-65396731 None:intergenic
AGCAAATAATGGAGTTTCTT+TGG 0.244138 4_4:+65392771 Msa0695720:five_prime_UTR
CTTGGTGGAACTTCCATTTC+AGG 0.247256 4_4:+65396692 Msa0695720:CDS
GTTTCCAAATCTTTCTTATC+AGG 0.252217 4_4:-65396764 None:intergenic
TCTAGTCGAGATAATCTTTC+GGG 0.270138 4_4:+65394025 Msa0695720:five_prime_UTR
AATCCTAATTTATATGAATC+AGG 0.272096 4_4:+65398059 Msa0695720:CDS
ACCTTGTTAACTCTTGTATT+GGG 0.272160 4_4:+65395283 Msa0695720:CDS
CTGCGCCTGTCCAAGTATTT+AGG 0.279333 4_4:-65398100 None:intergenic
TCTTAGAACTCCACCTATTC+TGG 0.281855 4_4:+65393713 Msa0695720:five_prime_UTR
AACTTCCTTTGGTTGGATTC+AGG 0.288084 4_4:+65393626 Msa0695720:five_prime_UTR
ATTTACCCTTAACAAATTCT+TGG 0.288357 4_4:+65392717 Msa0695720:five_prime_UTR
GAATATGCTGGATTTAATAC+TGG 0.292872 4_4:-65396663 None:intergenic
AACCTTGTTAACTCTTGTAT+TGG 0.293332 4_4:+65395282 Msa0695720:CDS
GGCACTTTGGAGTCCTTGAT+TGG 0.297515 4_4:+65393943 Msa0695720:five_prime_UTR
AAAGCCTAAAATTCTCTATC+AGG 0.297661 4_4:-65393483 None:intergenic
CTGGCTCGCTTCTGTTCTTT+CGG 0.300150 4_4:+65395062 Msa0695720:CDS
TGAAATATTTCATTCGCAAT+TGG 0.300733 4_4:+65393907 Msa0695720:five_prime_UTR
CCTGGCGGGCAAATCTTCTT+TGG 0.304204 4_4:+65393976 Msa0695720:five_prime_UTR
GCGCTCCAAACATATACTTT+TGG 0.309942 4_4:+65398477 Msa0695720:CDS
CATGTCCAAACCGAATAGTT+TGG 0.311035 4_4:+65395560 Msa0695720:CDS
TATGGACACTGCGAATCTTC+TGG 0.314809 4_4:-65394907 None:intergenic
ACAAGCCAAAAGTATATGTT+TGG 0.318477 4_4:-65398482 None:intergenic
CTCAGTGCCTAAATTTGAAA+TGG 0.325018 4_4:+65396724 Msa0695720:CDS
GATTTGCCCGCCAGGATAAT+AGG 0.326257 4_4:-65393968 None:intergenic
TGTTGATTTGTTTGTGGACT+TGG 0.327847 4_4:+65394672 Msa0695720:CDS
CAAGTTTGGTGTGTGTTAAC+TGG 0.327864 4_4:+65395043 Msa0695720:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.331175 4_4:-65394925 None:intergenic
GAGCATATTATCAAGTTTAG+AGG 0.332505 4_4:+65394540 Msa0695720:CDS
CATCAGTTTGTACTGGAAAA+AGG 0.334327 4_4:+65395435 Msa0695720:CDS
CATGGCTCGGTCGGGCTCAA+AGG 0.334629 4_4:+65394788 Msa0695720:CDS
CAGATGGTGCACTACAATTC+TGG 0.336019 4_4:+65398023 Msa0695720:intron
GGCCGCTCGAGGAAGGAAAA+AGG 0.340433 4_4:-65396627 None:intergenic
AAAAGTTACTGAACTTCCTT+TGG 0.341025 4_4:+65393615 Msa0695720:five_prime_UTR
ATTGATATCACACATAAGTT+TGG 0.341539 4_4:-65399203 None:intergenic
GCAGTAATTGTTGGTGCAAC+TGG 0.345129 4_4:+65397779 Msa0695720:CDS
TCTTTCTAAGGCAATGATAT+CGG 0.347103 4_4:-65394854 None:intergenic
TGGAAGTTCCACCAAGTGTT+TGG 0.349299 4_4:-65396685 None:intergenic
AGTCATCTTGATAATTCATT+TGG 0.349814 4_4:-65395764 None:intergenic
CCTCAGCTCTACCTATTTGT+TGG 0.355681 4_4:-65398229 None:intergenic
TTATCCTGATAAGAAAGATT+TGG 0.357619 4_4:+65396760 Msa0695720:CDS
TGATGGTAGAAAAGAGAATT+TGG 0.358050 4_4:+65396583 Msa0695720:CDS
TAACATCAAACTGCTTAAAC+TGG 0.358400 4_4:-65396919 None:intergenic
TTGAAGCTGACAGCAAATAA+TGG 0.358589 4_4:+65392760 Msa0695720:five_prime_UTR
CTTACACTTACTCATAAATA+GGG 0.358897 4_4:-65392529 None:intergenic
CACATAAGTTTGGAATATAT+TGG 0.361447 4_4:-65399193 None:intergenic
CTTCTTTGGCATCAGATCTC+TGG 0.362072 4_4:+65393990 Msa0695720:five_prime_UTR
TCGTCTCCATCCAAACTATT+CGG 0.364995 4_4:-65395570 None:intergenic
AAAAGAATTGTCAACATTGC+AGG 0.365225 4_4:+65396982 Msa0695720:CDS
CTCTTATTTCATATGTTACA+TGG 0.368560 4_4:-65399342 None:intergenic
GAAGATGGTGGAACTGGAAT+TGG 0.370713 4_4:+65392650 Msa0695720:five_prime_UTR
CAAAAGGCTTCTACAAGCTT+GGG 0.370783 4_4:-65398607 None:intergenic
TCAAGTTCTTCTCTCTCTAC+AGG 0.375552 4_4:+65398160 Msa0695720:CDS
TACATAATCACCTTCTGAAA+TGG 0.376474 4_4:-65394755 None:intergenic
CAAATTTCCTTTGGCAATCT+CGG 0.376698 4_4:+65393516 Msa0695720:five_prime_UTR
ATCCTGCAGAAGTCCCCTTC+TGG 0.376940 4_4:-65398558 None:intergenic
TCATGGATCCTAATAACTTC+TGG 0.378132 4_4:-65396854 None:intergenic
TCCACATCACCACCAAGCTT+TGG 0.378797 4_4:-65392626 None:intergenic
AGCATACTGTAAAGGTACTA+TGG 0.379495 4_4:+65395526 Msa0695720:CDS
TGGTGATGTGGAGGTGAAAT+TGG 0.381248 4_4:+65395839 Msa0695720:CDS
GCAATTGGGCATATCTCCTT+TGG 0.387447 4_4:+65393922 Msa0695720:five_prime_UTR
CATCCTTGAGAGAAGTCTTC+CGG 0.389453 4_4:+65397119 Msa0695720:CDS
GAGGTAGGTGTTGTTCAAAT+AGG 0.390767 4_4:-65392680 None:intergenic
GCTGGTTATGACCAACAAAT+AGG 0.391028 4_4:+65398218 Msa0695720:CDS
GAGAAGAACTTGAAGAATAG+TGG 0.392888 4_4:-65398150 None:intergenic
TGAAGAATAGTGGAGGTTCC+AGG 0.394764 4_4:-65398140 None:intergenic
CTAAGGGGCCATGGCTCGGT+CGG 0.396317 4_4:+65394779 Msa0695720:CDS
ATCAATTCCCTTATCACAAA+AGG 0.396332 4_4:-65398623 None:intergenic
GAAATATTTCATTCGCAATT+GGG 0.399128 4_4:+65393908 Msa0695720:five_prime_UTR
TGCTGATTTAGAAGCGTTGT+AGG 0.399875 4_4:-65394959 None:intergenic
GACAAGAGGGTGTAAGAGTC+AGG 0.400833 4_4:+65395254 Msa0695720:CDS
TAATAGATACAACATAGATT+TGG 0.401612 4_4:-65398300 None:intergenic
GGCTCTGAAGTGTGGAATCC+TGG 0.402574 4_4:+65398122 Msa0695720:CDS
TTGATTGGTTCCTATTATCC+TGG 0.406512 4_4:+65393958 Msa0695720:five_prime_UTR
GCATATCTCCTTTGGCACTT+TGG 0.407548 4_4:+65393930 Msa0695720:five_prime_UTR
TCCATCCAAACTATTCGGTT+TGG 0.408736 4_4:-65395565 None:intergenic
TGTGTGTTTATAACATTCAC+TGG 0.409667 4_4:-65395399 None:intergenic
TTCTGGAGGCAAATCTCCTT+TGG 0.410170 4_4:+65393730 Msa0695720:five_prime_UTR
CTTGCAATGGTTCCAAAGCT+TGG 0.411404 4_4:+65392614 Msa0695720:five_prime_UTR
AAGCTTACAGGTGGTTCGTT+AGG 0.414305 4_4:-65397857 None:intergenic
CAGAATATATTTCTGTTGAA+TGG 0.415657 4_4:+65393410 Msa0695720:five_prime_UTR
GAAATAAGAGATACATTGAT+TGG 0.417699 4_4:+65399355 Msa0695720:three_prime_UTR
TGAGGAAAATGCTCCTGAAA+TGG 0.419447 4_4:-65396705 None:intergenic
TGTGATTATGTATCATATAA+AGG 0.419725 4_4:+65399314 Msa0695720:three_prime_UTR
ATGGCTCGGTCGGGCTCAAA+GGG 0.420283 4_4:+65394789 Msa0695720:CDS
ACCCTTCCCATCTGTCCACT+TGG 0.421233 4_4:-65394643 None:intergenic
AGAAGGTGATTATGTAACTA+AGG 0.421683 4_4:+65394762 Msa0695720:CDS
TTGGAATCTTGCCAGCTTGG+TGG 0.423644 4_4:-65395108 None:intergenic
ATCCTTGAGAGAAGTCTTCC+GGG 0.423857 4_4:+65397120 Msa0695720:CDS
GTCTAGTCGAGATAATCTTT+CGG 0.423878 4_4:+65394024 Msa0695720:five_prime_UTR
AACTACCAAGAATTTGTTAA+GGG 0.424521 4_4:-65392722 None:intergenic
AGAATGGTCAATATTTAATC+AGG 0.425529 4_4:-65393442 None:intergenic
GTGGAAGAAGATGGTGGAAC+TGG 0.427264 4_4:+65392644 Msa0695720:five_prime_UTR
TATGATATACACCTTTGAAA+TGG 0.428460 4_4:-65392825 None:intergenic
AACCAGAAGGGGACTTCTGC+AGG 0.428580 4_4:+65398556 Msa0695720:CDS
GCAAAATGGTGAACATGGTT+TGG 0.428637 4_4:+65395353 Msa0695720:CDS
TATGCTGATGATATCTTCAA+TGG 0.437614 4_4:-65394113 None:intergenic
TTGCCACAAAATGTCAACTT+TGG 0.438550 4_4:-65395334 None:intergenic
AAGCCTTACTTTAATGAGGC+TGG 0.438912 4_4:+65398200 Msa0695720:CDS
GACAAGTGTTGATTTGTTTG+TGG 0.439155 4_4:+65394666 Msa0695720:CDS
AAACTACCAAGAATTTGTTA+AGG 0.439419 4_4:-65392723 None:intergenic
GTCTGAGTCTCCTAAATACT+TGG 0.441688 4_4:+65398090 Msa0695720:CDS
CAAAATGGTGAACATGGTTT+GGG 0.441925 4_4:+65395354 Msa0695720:CDS
CAGGATGGCTATGTGGAACT+TGG 0.442039 4_4:+65394980 Msa0695720:CDS
TAGTGCGGGCAAATTTCCTT+TGG 0.442096 4_4:+65393507 Msa0695720:five_prime_UTR
GTTGAACAGTCTGTTCCTCT+TGG 0.445698 4_4:-65395200 None:intergenic
GAAGTACAAAATCAAGAGAT+TGG 0.446095 4_4:-65399273 None:intergenic
TTTCTGTATCTTTATCAGCT+TGG 0.448025 4_4:-65395695 None:intergenic
GGTTTCGCAGGGTAGCTTGT+TGG 0.449728 4_4:-65393803 None:intergenic
ATTCACAGCAAGTAGGCAAA+AGG 0.450159 4_4:-65393380 None:intergenic
TAGTTTGGATGGAGACGAAA+TGG 0.451117 4_4:+65395575 Msa0695720:CDS
GTTACTGAACTTCCTTTGGT+TGG 0.451645 4_4:+65393619 Msa0695720:five_prime_UTR
TCAATCATCTCTTGAGGAGC+AGG 0.452258 4_4:-65396194 None:intergenic
CAGCGCAGGTAACAGTCATC+AGG 0.452698 4_4:-65395789 None:intergenic
CTCACTACTGCTGCTGTCAC+TGG 0.452824 4_4:-65394476 None:intergenic
TAAGGGGCCATGGCTCGGTC+GGG 0.453566 4_4:+65394780 Msa0695720:CDS
CGGTCGGGCTCAAAGGGTTG+TGG 0.453882 4_4:+65394795 Msa0695720:CDS
ACAAAAGGCTTCTACAAGCT+TGG 0.456304 4_4:-65398608 None:intergenic
ACCAAGTGTTTGGAATATGC+TGG 0.459562 4_4:-65396675 None:intergenic
TCTGGAAATTTACGAGTCAA+TGG 0.462644 4_4:-65394889 None:intergenic
GTTTGAAGATTCCTGTGTAC+TGG 0.462850 4_4:+65393576 Msa0695720:five_prime_UTR
TGTACTGGACAAATCTCCTT+TGG 0.464578 4_4:+65393591 Msa0695720:five_prime_UTR
TTGGCCTCATCAGTTTGTAC+TGG 0.464675 4_4:+65395428 Msa0695720:CDS
GCTTGTAAAGCATATCTTGA+AGG 0.469930 4_4:+65398499 Msa0695720:CDS
AGGAGATTTGCCTCCAGAAT+AGG 0.471833 4_4:-65393726 None:intergenic
TATCTTGAAGGCGCTTCCAT+TGG 0.473818 4_4:+65398511 Msa0695720:CDS
ACTGTTATTGGTTTCAAAGA+TGG 0.475922 4_4:+65395819 Msa0695720:CDS
TCGCAGTGTCCATACTATCC+AGG 0.476869 4_4:+65394916 Msa0695720:CDS
CAAACTATTCGGTTTGGACA+TGG 0.477382 4_4:-65395559 None:intergenic
TGAGAAGCCTTACTTTAATG+AGG 0.477468 4_4:+65398196 Msa0695720:CDS
CCCCAATACAAGAGTTAACA+AGG 0.479939 4_4:-65395284 None:intergenic
TAAATATTTGAAGAGGGAAG+AGG 0.480249 4_4:-65392699 None:intergenic
TTGTGCTGTCGATGCAAGTT+TGG 0.480632 4_4:+65395029 Msa0695720:CDS
ATATACACCTTTGAAATGGT+TGG 0.481448 4_4:-65392821 None:intergenic
TATGACATTTAAAGTAGTGT+TGG 0.484315 4_4:+65399428 Msa0695720:three_prime_UTR
CAAGAATAACTTATCTACTA+CGG 0.485628 4_4:+65398667 Msa0695720:exon
TTAAGCCTGGCAGTAAAAGA+TGG 0.487073 4_4:+65395475 Msa0695720:CDS
AAGTCTACCTTCTGATAAGA+AGG 0.487556 4_4:+65396223 Msa0695720:CDS
CCAAAGAAGATTTGCCCGCC+AGG 0.488608 4_4:-65393976 None:intergenic
TCAAGTTTAGAGGAAAGCAT+TGG 0.490374 4_4:+65394550 Msa0695720:CDS
CGGACAAACTTTCGAAGATT+CGG 0.491223 4_4:+65394731 Msa0695720:CDS
GTCAGATCCAAGTGGACAGA+TGG 0.493007 4_4:+65394636 Msa0695720:CDS
AAATATTGACCATTCTCCCT+TGG 0.495239 4_4:+65393449 Msa0695720:five_prime_UTR
TGTGACAGGCATATAATTGA+TGG 0.496070 4_4:+65394420 Msa0695720:intron
CAAGTTTAGAGGAAAGCATT+GGG 0.497314 4_4:+65394551 Msa0695720:CDS
CATTGCCTTAGAAAGAGAAA+AGG 0.497528 4_4:+65394861 Msa0695720:CDS
AAGTTTGGAATATATTGGTC+GGG 0.498457 4_4:-65399188 None:intergenic
AAAAGCACGACAACACGGTC+AGG 0.500051 4_4:-65395134 None:intergenic
TATTTGGTACCAAGGGAGAA+TGG 0.504467 4_4:-65393458 None:intergenic
ACCTTTCCCTTCTTATCAGA+AGG 0.504832 4_4:-65396230 None:intergenic
AATGTTCAGGACTTGTTAAG+TGG 0.505536 4_4:+65396560 Msa0695720:intron
ATGCTTCAATTTGCTTGAGA+AGG 0.505815 4_4:+65394167 Msa0695720:five_prime_UTR
TGCAACTCATCCGTTGGATG+TGG 0.506708 4_4:-65396806 None:intergenic
TAACCAGCCTCATTAAAGTA+AGG 0.506806 4_4:-65398203 None:intergenic
CAAACTGGCAGCTTGGTGAC+TGG 0.507507 4_4:+65395163 Msa0695720:CDS
ATCCTAATTTATATGAATCA+GGG 0.512462 4_4:+65398060 Msa0695720:CDS
CTTTGATATATGTTTCCCTC+CGG 0.513418 4_4:+65397829 Msa0695720:CDS
TCGTGTGTTTGAAGAAAGAA+TGG 0.514633 4_4:+65397745 Msa0695720:CDS
GATAAAGATACAGAAAAGTC+GGG 0.517044 4_4:+65395702 Msa0695720:CDS
TCTTACGATCCTCTTAAGCC+TGG 0.518535 4_4:+65395462 Msa0695720:CDS
GACTGTTACCTGCGCTGTGT+TGG 0.520842 4_4:+65395795 Msa0695720:CDS
TCACACGCAAACTGGCAGCT+TGG 0.522952 4_4:+65395156 Msa0695720:CDS
GAAGGTGATTATGTAACTAA+GGG 0.524599 4_4:+65394763 Msa0695720:CDS
AAGAATAACTTATCTACTAC+GGG 0.524949 4_4:+65398668 Msa0695720:exon
TGATAAAGATACAGAAAAGT+CGG 0.525150 4_4:+65395701 Msa0695720:CDS
CTCATGCGAGCAGTAATTGT+TGG 0.526875 4_4:+65397770 Msa0695720:CDS
TAAGCCTGGCAGTAAAAGAT+GGG 0.527531 4_4:+65395476 Msa0695720:CDS
ATCAGGTTTATTTGGTACCA+AGG 0.528647 4_4:-65393466 None:intergenic
GCGGAAAATCATTCTTGTCA+TGG 0.528752 4_4:-65396871 None:intergenic
CTTCTTGATTCACAGCAAGT+AGG 0.530094 4_4:-65393387 None:intergenic
TTAACCTTTACTCTCTGCCC+TGG 0.532334 4_4:-65394934 None:intergenic
TTCACTGGGAGTAAACTCTC+TGG 0.532864 4_4:-65395384 None:intergenic
ATACCTTTACTAGCTTATGC+TGG 0.533296 4_4:+65392797 Msa0695720:five_prime_UTR
CTAAATACTTGGACAGGCGC+AGG 0.533981 4_4:+65398101 Msa0695720:CDS
GGTGGTGATGTGGAAGAAGA+TGG 0.534065 4_4:+65392635 Msa0695720:five_prime_UTR
TATGAGTAGTGATTCGGAAT+GGG 0.535163 4_4:+65394447 Msa0695720:CDS
CCTTGTTAACTCTTGTATTG+GGG 0.535470 4_4:+65395284 Msa0695720:CDS
TAAGGGTAAATATTTGAAGA+GGG 0.535778 4_4:-65392705 None:intergenic
AGGATAATAGGAACCAATCA+AGG 0.536133 4_4:-65393956 None:intergenic
CTGGAACTCCGTATCATGAC+GGG 0.537749 4_4:+65397798 Msa0695720:CDS
GTAGATTGCAACTCATCCGT+TGG 0.540415 4_4:-65396812 None:intergenic
ATCCAAGTGGACAGATGGGA+AGG 0.540935 4_4:+65394641 Msa0695720:CDS
AGTCTCCTAAATACTTGGAC+AGG 0.541227 4_4:+65398095 Msa0695720:CDS
TTAAGGGTAAATATTTGAAG+AGG 0.541400 4_4:-65392706 None:intergenic
GCAGCTTGGTGACTGGTGCA+TGG 0.542630 4_4:+65395170 Msa0695720:CDS
TGGAGAGACAATCAAGATGA+AGG 0.543990 4_4:+65395000 Msa0695720:CDS
CTGTGGATGCTCCACCAAGC+TGG 0.545543 4_4:+65395097 Msa0695720:CDS
AGCATATTCCAAACACTTGG+TGG 0.546181 4_4:+65396677 Msa0695720:CDS
TCAGGTTTATTTGGTACCAA+GGG 0.546527 4_4:-65393465 None:intergenic
TTCACAGCAAGTAGGCAAAA+GGG 0.546802 4_4:-65393379 None:intergenic
CATATAAATTAGGATTTAAG+CGG 0.547126 4_4:-65398052 None:intergenic
TAAGTTTGGAATATATTGGT+CGG 0.549032 4_4:-65399189 None:intergenic
CTTGGAAAATGTTAAAGGAA+AGG 0.549568 4_4:+65394690 Msa0695720:CDS
GTAACTAAGGGGCCATGGCT+CGG 0.550278 4_4:+65394775 Msa0695720:CDS
TGCTGGTCCAACCATTTCAA+AGG 0.550903 4_4:+65392814 Msa0695720:five_prime_UTR
TTGGTTCCTATTATCCTGGC+GGG 0.551717 4_4:+65393962 Msa0695720:five_prime_UTR
GGATGCTATGAGTAGTGATT+CGG 0.552865 4_4:+65394441 Msa0695720:CDS
CAGGTTCAATAGAAATGATG+TGG 0.553380 4_4:+65393347 Msa0695720:intron
TTGCAGCTCAACAAACTGAC+TGG 0.554166 4_4:-65398647 None:intergenic
AAGAACAACCCGTCATGATA+CGG 0.555892 4_4:-65397806 None:intergenic
GTGGAGGTGAAATTGGCTAC+TGG 0.556086 4_4:+65395846 Msa0695720:CDS
TTTGGATGGAGACGAAATGG+AGG 0.556480 4_4:+65395578 Msa0695720:CDS
AAGATTCGGTCCATTTCAGA+AGG 0.557165 4_4:+65394745 Msa0695720:CDS
CAGGACTTGTTAAGTGGTGA+TGG 0.557746 4_4:+65396566 Msa0695720:intron
CTATGAGTAGTGATTCGGAA+TGG 0.558640 4_4:+65394446 Msa0695720:CDS
CAATCATCTCTTGAGGAGCA+GGG 0.559511 4_4:-65396193 None:intergenic
GAAGGCGCTTCCATTGGATG+TGG 0.559665 4_4:+65398517 Msa0695720:CDS
TACAACGCTTCTAAATCAGC+AGG 0.560075 4_4:+65394961 Msa0695720:CDS
GTTCAAAGGCCGCTCGAGGA+AGG 0.560557 4_4:-65396634 None:intergenic
TTCTAAGAGTGACTTCTGAA+TGG 0.561818 4_4:-65393698 None:intergenic
CTTTGAGCCCGACCGAGCCA+TGG 0.562374 4_4:-65394787 None:intergenic
TGGTGCACTACAATTCTGGC+GGG 0.562522 4_4:+65398027 Msa0695720:CDS
TCCAGCATATTCCAAACACT+TGG 0.562882 4_4:+65396674 Msa0695720:CDS
CGCAGTGTCCATACTATCCA+GGG 0.563072 4_4:+65394917 Msa0695720:CDS
AGACATCATCGTTAAACAGA+TGG 0.564845 4_4:-65399401 None:intergenic
CCGCGTTCAATCATCTCTTG+AGG 0.564947 4_4:-65396200 None:intergenic
AACATACATGAATAGCAGAA+AGG 0.568486 4_4:-65393556 None:intergenic
TCCAAACCGAATAGTTTGGA+TGG 0.569256 4_4:+65395564 Msa0695720:CDS
GTTACTGTATTGTTTGACGA+TGG 0.570953 4_4:+65394823 Msa0695720:CDS
ACTCATAGTAAGACTTCGTG+TGG 0.579194 4_4:-65395229 None:intergenic
TCGCAGGGTAGCTTGTTGGA+AGG 0.579936 4_4:-65393799 None:intergenic
CTGCATTGAACCACATCCAA+CGG 0.580334 4_4:+65396796 Msa0695720:CDS
CAAGGACTCCAAAGTGCCAA+AGG 0.580574 4_4:-65393938 None:intergenic
CTATCCAGGGCAGAGAGTAA+AGG 0.580957 4_4:+65394930 Msa0695720:CDS
GGACCAGCATAAGCTAGTAA+AGG 0.580984 4_4:-65392800 None:intergenic
CTGTTGCTTTCTAAAGAAAG+CGG 0.581297 4_4:-65396890 None:intergenic
ACAAGAGGGTGTAAGAGTCA+GGG 0.584173 4_4:+65395255 Msa0695720:CDS
TCCAAAGCTTGGTGGTGATG+TGG 0.586921 4_4:+65392625 Msa0695720:five_prime_UTR
TCAGATCCAAGTGGACAGAT+GGG 0.587594 4_4:+65394637 Msa0695720:CDS
ATTATGTAACTAAGGGGCCA+TGG 0.589006 4_4:+65394770 Msa0695720:CDS
TGCGAAGGAGCATACTGTAA+AGG 0.590233 4_4:+65395518 Msa0695720:CDS
AACTGAACATGAAAACCAGA+AGG 0.591244 4_4:+65398543 Msa0695720:CDS
GCAATGGTTCCAAAGCTTGG+TGG 0.593236 4_4:+65392617 Msa0695720:five_prime_UTR
GCTCCTTCGCATCCACACAT+TGG 0.595521 4_4:-65395506 None:intergenic
AGGAGATTTGTCCAGTACAC+AGG 0.595632 4_4:-65393587 None:intergenic
AGATTTGCCTCCAGAATAGG+TGG 0.597750 4_4:-65393723 None:intergenic
CAGTGACAGCAGCAGTAGTG+AGG 0.599348 4_4:+65394477 Msa0695720:CDS
TGTTATAGAAAGTTGTTCTG+AGG 0.599468 4_4:+65396937 Msa0695720:CDS
AGTCTACCTTCTGATAAGAA+GGG 0.599826 4_4:+65396224 Msa0695720:CDS
CAGGCGCAGGCTCTGAAGTG+TGG 0.599880 4_4:+65398114 Msa0695720:CDS
AGAGTGTCTCCTCCTTGCAA+TGG 0.603740 4_4:+65392601 Msa0695720:five_prime_UTR
TAACAGTGCCAACACAGCGC+AGG 0.604202 4_4:-65395803 None:intergenic
TGGTTTCAAAGATGGTGATG+TGG 0.607004 4_4:+65395827 Msa0695720:CDS
TTGTGGCAAAATGGTGAACA+TGG 0.608603 4_4:+65395348 Msa0695720:CDS
ACCTTCTGATAAGAAGGGAA+AGG 0.610683 4_4:+65396229 Msa0695720:CDS
TACTACCTGAATCCAACCAA+AGG 0.610754 4_4:-65393631 None:intergenic
CTGTCCACTTGGATCTGACA+CGG 0.610789 4_4:-65394632 None:intergenic
AAAAGTTCAAAGGCCGCTCG+AGG 0.610806 4_4:-65396638 None:intergenic
TACCCGGAAGACTTCTCTCA+AGG 0.612300 4_4:-65397122 None:intergenic
GGCTACTGGTTTCACAACCA+AGG 0.613861 4_4:+65395860 Msa0695720:CDS
AAATCAGCAGGATGGCTATG+TGG 0.615349 4_4:+65394973 Msa0695720:CDS
CAAGCTTTGGAACCATTGCA+AGG 0.617014 4_4:-65392613 None:intergenic
TTCGGATAGCAATTTGACTG+TGG 0.617830 4_4:+65395080 Msa0695720:CDS
ACTGGAACTCCGTATCATGA+CGG 0.617936 4_4:+65397797 Msa0695720:CDS
GGTGGTTCGTTAGGATACTC+CGG 0.623296 4_4:-65397848 None:intergenic
ACTGAACATGAAAACCAGAA+GGG 0.628542 4_4:+65398544 Msa0695720:CDS
AGATAGTTACAAGATGCCAA+AGG 0.629388 4_4:-65393746 None:intergenic
TGTCCAATGTGTGGATGCGA+AGG 0.629958 4_4:+65395503 Msa0695720:CDS
ACTTCTATGATTAGACGTTG+TGG 0.630040 4_4:+65399291 Msa0695720:three_prime_UTR
CTGAACATGAAAACCAGAAG+GGG 0.630377 4_4:+65398545 Msa0695720:CDS
AATCATCTCTTGAGGAGCAG+GGG 0.631754 4_4:-65396192 None:intergenic
ACATAGATTTGGCTGTGACA+AGG 0.632266 4_4:-65398289 None:intergenic
GTGTGTTTATAACATTCACT+GGG 0.634130 4_4:-65395398 None:intergenic
ATGGTGCACTACAATTCTGG+CGG 0.635699 4_4:+65398026 Msa0695720:CDS
GGTGATGTGGAAGAAGATGG+TGG 0.636328 4_4:+65392638 Msa0695720:five_prime_UTR
TCCAAGTGGACAGATGGGAA+GGG 0.638169 4_4:+65394642 Msa0695720:CDS
ATTGGTTCCTATTATCCTGG+CGG 0.639563 4_4:+65393961 Msa0695720:five_prime_UTR
TGGGTGCTCAACTAGTTCGT+AGG 0.642489 4_4:-65395613 None:intergenic
AGCGCAGGTAACAGTCATCA+GGG 0.642525 4_4:-65395788 None:intergenic
AAGAACTTGAAGAATAGTGG+AGG 0.645772 4_4:-65398147 None:intergenic
CATTTCAAATTTAGGCACTG+AGG 0.648291 4_4:-65396723 None:intergenic
TTTCGGATTGATAAACACGA+AGG 0.649683 4_4:+65396158 Msa0695720:CDS
GTGCATGGTTGCAGACCAAG+AGG 0.653228 4_4:+65395185 Msa0695720:CDS
CAACAAATAGGTAGAGCTGA+GGG 0.656761 4_4:+65398230 Msa0695720:CDS
CTCATAGTAAGACTTCGTGT+GGG 0.656951 4_4:-65395228 None:intergenic
GGTTCGTTAGGATACTCCGG+AGG 0.659291 4_4:-65397845 None:intergenic
TCTATTACGAAAGCCACCCA+AGG 0.660166 4_4:+65398316 Msa0695720:CDS
TAGAACTCCACCTATTCTGG+AGG 0.661305 4_4:+65393716 Msa0695720:five_prime_UTR
TGGTGATATTATGTTCAAGG+CGG 0.662885 4_4:+65395653 Msa0695720:CDS
AAAAGGCTTCTACAAGCTTG+GGG 0.663581 4_4:-65398606 None:intergenic
CTTACTATGAGTATGACAAG+AGG 0.669246 4_4:+65395240 Msa0695720:CDS
ATGGGGTGTTGTCCAATGTG+TGG 0.669989 4_4:+65395494 Msa0695720:CDS
CCAACAAATAGGTAGAGCTG+AGG 0.673085 4_4:+65398229 Msa0695720:CDS
TTACTATGAGTATGACAAGA+GGG 0.674623 4_4:+65395241 Msa0695720:CDS
TATTTGAAGAGGGAAGAGGT+AGG 0.677144 4_4:-65392695 None:intergenic
GGGTAATGACATGAATGCGG+AGG 0.681615 4_4:+65395722 Msa0695720:CDS
CTAGTCGAGATAATCTTTCG+GGG 0.682837 4_4:+65394026 Msa0695720:five_prime_UTR
TTTCAAAGATGGTGATGTGG+AGG 0.685458 4_4:+65395830 Msa0695720:CDS
ACGCTTCTAAATCAGCAGGA+TGG 0.687059 4_4:+65394965 Msa0695720:CDS
GTCGGGTAATGACATGAATG+CGG 0.687237 4_4:+65395719 Msa0695720:CDS
CCTCAAGAGATGATTGAACG+CGG 0.691236 4_4:+65396200 Msa0695720:CDS
GTGTGAAAAGCACGACAACA+CGG 0.692670 4_4:-65395139 None:intergenic
AAGCCTGGCAGTAAAAGATG+GGG 0.699162 4_4:+65395477 Msa0695720:CDS
AAGGTGATTATGTAACTAAG+GGG 0.699693 4_4:+65394764 Msa0695720:CDS
GTTCGTTAGGATACTCCGGA+GGG 0.719877 4_4:-65397844 None:intergenic
TGCTCCGTGTCAGATCCAAG+TGG 0.720832 4_4:+65394628 Msa0695720:CDS
GCTTTGGAACCATTGCAAGG+AGG 0.722127 4_4:-65392610 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTGAAAATGAATT+TGG - chr4_4:65396430-65396449 None:intergenic 10.0%
!!! AAATTAATCTTTGAAAAAAA+CGG - chr4_4:65396487-65396506 None:intergenic 10.0%
!! TAATTTCATCTTTATTATTT+AGG - chr4_4:65397399-65397418 None:intergenic 10.0%
!! TTGAAAAATATAAACAAAAT+TGG + chr4_4:65397451-65397470 Msa0695720:intron 10.0%
!!! TGGTAATATTTTATAAGATA+AGG - chr4_4:65393681-65393700 None:intergenic 15.0%
!!! TTTTTTTGTCTATTTTTTCT+CGG - chr4_4:65393827-65393846 None:intergenic 15.0%
!!! TTCATTTTCAATTTTAAATG+AGG + chr4_4:65396432-65396451 Msa0695720:intron 15.0%
!!! TTTGATTTATAGGTAAAAAA+AGG + chr4_4:65397066-65397085 Msa0695720:intron 15.0%
!! AGAAATAAGTATATAAAACA+GGG - chr4_4:65397178-65397197 None:intergenic 15.0%
!! AAAAATATAAACAAAATTGG+TGG + chr4_4:65397454-65397473 Msa0695720:intron 15.0%
!! ATTTGATATACTAATGAAAA+TGG + chr4_4:65397633-65397652 Msa0695720:intron 15.0%
!!! AAAATAAACCTTATTTTCAT+GGG - chr4_4:65398372-65398391 None:intergenic 15.0%
!! TAAACAAAATGATTTATGTT+TGG - chr4_4:65399018-65399037 None:intergenic 15.0%
!! TCTAACATAATCATCTTATA+TGG - chr4_4:65392991-65393010 None:intergenic 20.0%
!!! AATCTTTTTCATGAAAATTG+TGG + chr4_4:65393210-65393229 Msa0695720:intron 20.0%
!!! TTAATTTGTTCTTTTGTTTC+AGG + chr4_4:65393328-65393347 Msa0695720:intron 20.0%
!! ATGAACATTAGAAGTAAATA+AGG - chr4_4:65394210-65394229 None:intergenic 20.0%
!! CATATCATCAATTTCAAATA+AGG + chr4_4:65394271-65394290 Msa0695720:intron 20.0%
!!! GAAGAAATTGATTTTCAATA+TGG + chr4_4:65394505-65394524 Msa0695720:CDS 20.0%
!! GGTATTAAAAAATGTAAACT+CGG + chr4_4:65394711-65394730 Msa0695720:CDS 20.0%
!!! ATTGGGGAATTTTTTATAAT+TGG + chr4_4:65395300-65395319 Msa0695720:CDS 20.0%
!!! TTGGGGAATTTTTTATAATT+GGG + chr4_4:65395301-65395320 Msa0695720:CDS 20.0%
!!! TTATAAACACACATGAATTT+TGG + chr4_4:65395409-65395428 Msa0695720:CDS 20.0%
!! ACTATATTTACAGAAAATCA+TGG - chr4_4:65395890-65395909 None:intergenic 20.0%
!! TAGAAAATAAGATACAACAT+TGG - chr4_4:65396048-65396067 None:intergenic 20.0%
!! TAGAGAAAATGTACTAATAT+AGG + chr4_4:65396399-65396418 Msa0695720:intron 20.0%
!! TCATTATCCATTTCAAATTT+AGG - chr4_4:65396734-65396753 None:intergenic 20.0%
!! ATTTATAGGTAAAAAAAGGT+TGG + chr4_4:65397070-65397089 Msa0695720:intron 20.0%
!! TTTATAGGTAAAAAAAGGTT+GGG + chr4_4:65397071-65397090 Msa0695720:intron 20.0%
!! GAGAAATAAGTATATAAAAC+AGG - chr4_4:65397179-65397198 None:intergenic 20.0%
!!! AATGGATTTCCTTTTTAAAA+TGG - chr4_4:65397303-65397322 None:intergenic 20.0%
!! TTTCCAGATAAAATCTTAAA+TGG - chr4_4:65397581-65397600 None:intergenic 20.0%
!! ATATCAAATAATTAACGCTT+AGG - chr4_4:65397622-65397641 None:intergenic 20.0%
!! CATATAAATTAGGATTTAAG+CGG - chr4_4:65398055-65398074 None:intergenic 20.0%
!! AATCCTAATTTATATGAATC+AGG + chr4_4:65398059-65398078 Msa0695720:CDS 20.0%
!! ATCCTAATTTATATGAATCA+GGG + chr4_4:65398060-65398079 Msa0695720:CDS 20.0%
!! TAATAGATACAACATAGATT+TGG - chr4_4:65398303-65398322 None:intergenic 20.0%
!!! CAAAATAAACCTTATTTTCA+TGG - chr4_4:65398373-65398392 None:intergenic 20.0%
!! AAAGAATGAGAATTGATAAA+GGG - chr4_4:65398927-65398946 None:intergenic 20.0%
!! TAAAGAATGAGAATTGATAA+AGG - chr4_4:65398928-65398947 None:intergenic 20.0%
!! TGTGATTATGTATCATATAA+AGG + chr4_4:65399314-65399333 Msa0695720:three_prime_UTR 20.0%
! CTTACACTTACTCATAAATA+GGG - chr4_4:65392532-65392551 None:intergenic 25.0%
! TCTTACACTTACTCATAAAT+AGG - chr4_4:65392533-65392552 None:intergenic 25.0%
! TATGAGTAAGTGTAAGAAAA+AGG + chr4_4:65392536-65392555 Msa0695720:five_prime_UTR 25.0%
! TAAGGGTAAATATTTGAAGA+GGG - chr4_4:65392708-65392727 None:intergenic 25.0%
! TTAAGGGTAAATATTTGAAG+AGG - chr4_4:65392709-65392728 None:intergenic 25.0%
! ATTTACCCTTAACAAATTCT+TGG + chr4_4:65392717-65392736 Msa0695720:five_prime_UTR 25.0%
!!! AACTACCAAGAATTTGTTAA+GGG - chr4_4:65392725-65392744 None:intergenic 25.0%
!!! AAACTACCAAGAATTTGTTA+AGG - chr4_4:65392726-65392745 None:intergenic 25.0%
!! TATGATATACACCTTTGAAA+TGG - chr4_4:65392828-65392847 None:intergenic 25.0%
!! TTTCAAAGGTGTATATCATA+TGG + chr4_4:65392828-65392847 Msa0695720:intron 25.0%
!!! ATCCTGTTTTCTTTTAACTT+TGG + chr4_4:65392879-65392898 Msa0695720:intron 25.0%
! AACCAAAGTTAAAAGAAAAC+AGG - chr4_4:65392884-65392903 None:intergenic 25.0%
! ATTCTTTCTAATGCTATGTA+TGG + chr4_4:65392926-65392945 Msa0695720:intron 25.0%
! TAAGATGATTATGTTAGAAG+AGG + chr4_4:65392993-65393012 Msa0695720:intron 25.0%
!! CTTTAGATTTTATTCAACCT+TGG - chr4_4:65393035-65393054 None:intergenic 25.0%
! CAAGGTTGAATAAAATCTAA+AGG + chr4_4:65393033-65393052 Msa0695720:intron 25.0%
!!! AAAATCTAAAGGCATGTTTT+TGG + chr4_4:65393044-65393063 Msa0695720:intron 25.0%
!!! AAATCTAAAGGCATGTTTTT+GGG + chr4_4:65393045-65393064 Msa0695720:intron 25.0%
! TTGATATATGAAAAAGGACA+GGG - chr4_4:65393161-65393180 None:intergenic 25.0%
!!! TCCTTTTTCATATATCAACT+AGG + chr4_4:65393163-65393182 Msa0695720:intron 25.0%
!!! CCTTTTTCATATATCAACTA+GGG + chr4_4:65393164-65393183 Msa0695720:intron 25.0%
!! CAGAATATATTTCTGTTGAA+TGG + chr4_4:65393410-65393429 Msa0695720:five_prime_UTR 25.0%
! AGAATGGTCAATATTTAATC+AGG - chr4_4:65393445-65393464 None:intergenic 25.0%
! AATTCTCTATCAGGTTTATT+TGG - chr4_4:65393477-65393496 None:intergenic 25.0%
!! TAAACCTGATAGAGAATTTT+AGG + chr4_4:65393479-65393498 Msa0695720:five_prime_UTR 25.0%
! TGAAATATTTCATTCGCAAT+TGG + chr4_4:65393907-65393926 Msa0695720:five_prime_UTR 25.0%
! GAAATATTTCATTCGCAATT+GGG + chr4_4:65393908-65393927 Msa0695720:five_prime_UTR 25.0%
!! TGATATGCATAGTTTAGAAT+GGG - chr4_4:65394258-65394277 None:intergenic 25.0%
! ATGATATGCATAGTTTAGAA+TGG - chr4_4:65394259-65394278 None:intergenic 25.0%
! TAGTATCAAAATATTGTGAC+AGG + chr4_4:65394406-65394425 Msa0695720:intron 25.0%
!!! GAAATTGATTTTCAATATGG+TGG + chr4_4:65394508-65394527 Msa0695720:CDS 25.0%
!! TAAAACCTTTTCTCTTTCTA+AGG - chr4_4:65394869-65394888 None:intergenic 25.0%
! CATAATATCACCAAAAAAAC+AGG - chr4_4:65395646-65395665 None:intergenic 25.0%
!!! TTTTGGTGATATTATGTTCA+AGG + chr4_4:65395650-65395669 Msa0695720:CDS 25.0%
! TGATAAAGATACAGAAAAGT+CGG + chr4_4:65395701-65395720 Msa0695720:CDS 25.0%
!! AGTCATCTTGATAATTCATT+TGG - chr4_4:65395767-65395786 None:intergenic 25.0%
! GTAACATAATATTAGAACCA+TGG + chr4_4:65395965-65395984 Msa0695720:intron 25.0%
!!! TGATATTTGTTTTTCCAAAC+AGG + chr4_4:65396118-65396137 Msa0695720:intron 25.0%
! TCAATCCGAAAAATTTCATA+AGG - chr4_4:65396149-65396168 None:intergenic 25.0%
!! TCTTTGAAAAAAACGGATTT+AGG - chr4_4:65396480-65396499 None:intergenic 25.0%
! CATCACATTCAGTTTATATT+GGG - chr4_4:65396537-65396556 None:intergenic 25.0%
! ACATCACATTCAGTTTATAT+TGG - chr4_4:65396538-65396557 None:intergenic 25.0%
! AATACTGGAAAAAAGTTCAA+AGG - chr4_4:65396651-65396670 None:intergenic 25.0%
! TTATCCTGATAAGAAAGATT+TGG + chr4_4:65396760-65396779 Msa0695720:CDS 25.0%
!! CTTTTCCCTCATAAAAAAAA+TGG - chr4_4:65396967-65396986 None:intergenic 25.0%
! TACTACGTTGATATATTAGT+AGG + chr4_4:65397031-65397050 Msa0695720:intron 25.0%
! TTGATATATTAGTAGGCTAA+CGG + chr4_4:65397038-65397057 Msa0695720:intron 25.0%
!!! AACGGTTTTCTTTGATTTAT+AGG + chr4_4:65397056-65397075 Msa0695720:intron 25.0%
! ATATACATTCTCACTCAAAA+TGG - chr4_4:65397321-65397340 None:intergenic 25.0%
!!! ATTTTGAGTGAGAATGTATA+TGG + chr4_4:65397320-65397339 Msa0695720:intron 25.0%
!!! AATTTGATTTTGCGGATATT+AGG + chr4_4:65397427-65397446 Msa0695720:intron 25.0%
! AACATAAATAGAGTCTGTTT+GGG - chr4_4:65397726-65397745 None:intergenic 25.0%
! TTCCCTGATTCATATAAATT+AGG - chr4_4:65398065-65398084 None:intergenic 25.0%
! CAAGAATAACTTATCTACTA+CGG + chr4_4:65398667-65398686 Msa0695720:exon 25.0%
! AAGAATAACTTATCTACTAC+GGG + chr4_4:65398668-65398687 Msa0695720:exon 25.0%
! ACTAAAATAGACATAGCTAA+AGG - chr4_4:65398959-65398978 None:intergenic 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr4_4:65399062-65399081 None:intergenic 25.0%
!! TAAGTTTGGAATATATTGGT+CGG - chr4_4:65399192-65399211 None:intergenic 25.0%
!! CACATAAGTTTGGAATATAT+TGG - chr4_4:65399196-65399215 None:intergenic 25.0%
! ATTGATATCACACATAAGTT+TGG - chr4_4:65399206-65399225 None:intergenic 25.0%
!! CATATCAATTTTAAGCTTGT+TGG + chr4_4:65399246-65399265 Msa0695720:three_prime_UTR 25.0%
!! CTCTTATTTCATATGTTACA+TGG - chr4_4:65399345-65399364 None:intergenic 25.0%
! GAAATAAGAGATACATTGAT+TGG + chr4_4:65399355-65399374 Msa0695720:three_prime_UTR 25.0%
!!! ACACTCTTTTTGAAATGCTA+AGG - chr4_4:65392588-65392607 None:intergenic 30.0%
TAAATATTTGAAGAGGGAAG+AGG - chr4_4:65392702-65392721 None:intergenic 30.0%
! AGCAAATAATGGAGTTTCTT+TGG + chr4_4:65392771-65392790 Msa0695720:five_prime_UTR 30.0%
!! ATATACACCTTTGAAATGGT+TGG - chr4_4:65392824-65392843 None:intergenic 30.0%
AAAACAGGATAAATTTGCAG+TGG - chr4_4:65392869-65392888 None:intergenic 30.0%
TTCTAATGCTATGTATGGTT+TGG + chr4_4:65392931-65392950 Msa0695720:intron 30.0%
GTGATTTCATAAGAATTCCA+AGG + chr4_4:65393015-65393034 Msa0695720:intron 30.0%
!! CACAACTTTGTTGCTTTAAT+TGG - chr4_4:65393080-65393099 None:intergenic 30.0%
GTTGATATATGAAAAAGGAC+AGG - chr4_4:65393162-65393181 None:intergenic 30.0%
! CCCTAGTTGATATATGAAAA+AGG - chr4_4:65393167-65393186 None:intergenic 30.0%
CATCATTGTGAAGAACTAAT+AGG - chr4_4:65393245-65393264 None:intergenic 30.0%
AAAGCCTAAAATTCTCTATC+AGG - chr4_4:65393486-65393505 None:intergenic 30.0%
AACATACATGAATAGCAGAA+AGG - chr4_4:65393559-65393578 None:intergenic 30.0%
AAAAGTTACTGAACTTCCTT+TGG + chr4_4:65393615-65393634 Msa0695720:five_prime_UTR 30.0%
TATGCTGATGATATCTTCAA+TGG - chr4_4:65394116-65394135 None:intergenic 30.0%
GAGCATATTATCAAGTTTAG+AGG + chr4_4:65394540-65394559 Msa0695720:CDS 30.0%
! TTTGAGAGAACTTTTGTTCA+TGG + chr4_4:65394595-65394614 Msa0695720:CDS 30.0%
CTTGGAAAATGTTAAAGGAA+AGG + chr4_4:65394690-65394709 Msa0695720:CDS 30.0%
! TACATAATCACCTTCTGAAA+TGG - chr4_4:65394758-65394777 None:intergenic 30.0%
AGAAGGTGATTATGTAACTA+AGG + chr4_4:65394762-65394781 Msa0695720:CDS 30.0%
GAAGGTGATTATGTAACTAA+GGG + chr4_4:65394763-65394782 Msa0695720:CDS 30.0%
AAGGTGATTATGTAACTAAG+GGG + chr4_4:65394764-65394783 Msa0695720:CDS 30.0%
!! TCTTTCTAAGGCAATGATAT+CGG - chr4_4:65394857-65394876 None:intergenic 30.0%
TTACTATGAGTATGACAAGA+GGG + chr4_4:65395241-65395260 Msa0695720:CDS 30.0%
AACCTTGTTAACTCTTGTAT+TGG + chr4_4:65395282-65395301 Msa0695720:CDS 30.0%
ACCTTGTTAACTCTTGTATT+GGG + chr4_4:65395283-65395302 Msa0695720:CDS 30.0%
GTGTGTTTATAACATTCACT+GGG - chr4_4:65395401-65395420 None:intergenic 30.0%
TGTGTGTTTATAACATTCAC+TGG - chr4_4:65395402-65395421 None:intergenic 30.0%
CAAAAAAACAGGAGTAATCT+GGG - chr4_4:65395635-65395654 None:intergenic 30.0%
TTTCTGTATCTTTATCAGCT+TGG - chr4_4:65395698-65395717 None:intergenic 30.0%
GATAAAGATACAGAAAAGTC+GGG + chr4_4:65395702-65395721 Msa0695720:CDS 30.0%
!! ACTGTTATTGGTTTCAAAGA+TGG + chr4_4:65395819-65395838 Msa0695720:CDS 30.0%
ATCCATACTTTGACTATATG+TGG - chr4_4:65395933-65395952 None:intergenic 30.0%
TAGTCAAAGTATGGATTTGA+TGG + chr4_4:65395937-65395956 Msa0695720:intron 30.0%
! AAGTATGGATTTGATGGTAA+TGG + chr4_4:65395943-65395962 Msa0695720:intron 30.0%
! TTCCGCCTTATGAAATTTTT+CGG + chr4_4:65396141-65396160 Msa0695720:CDS 30.0%
ATCCGAAAAATTTCATAAGG+CGG - chr4_4:65396146-65396165 None:intergenic 30.0%
GGAAACTATAATCAAAAGAC+AGG + chr4_4:65396366-65396385 Msa0695720:intron 30.0%
GAATGTGATGTTTAATGTTC+AGG + chr4_4:65396547-65396566 Msa0695720:intron 30.0%
TGATGGTAGAAAAGAGAATT+TGG + chr4_4:65396583-65396602 Msa0695720:CDS 30.0%
GAATATGCTGGATTTAATAC+TGG - chr4_4:65396666-65396685 None:intergenic 30.0%
GTTTCCAAATCTTTCTTATC+AGG - chr4_4:65396767-65396786 None:intergenic 30.0%
CTTCATATCCAGAAGTTATT+AGG + chr4_4:65396846-65396865 Msa0695720:CDS 30.0%
TAACATCAAACTGCTTAAAC+TGG - chr4_4:65396922-65396941 None:intergenic 30.0%
TGTTATAGAAAGTTGTTCTG+AGG + chr4_4:65396937-65396956 Msa0695720:CDS 30.0%
!!! GACCACCATTTTTTTTATGA+GGG + chr4_4:65396959-65396978 Msa0695720:CDS 30.0%
TTCCCTCATAAAAAAAATGG+TGG - chr4_4:65396964-65396983 None:intergenic 30.0%
AAAAGAATTGTCAACATTGC+AGG + chr4_4:65396982-65397001 Msa0695720:CDS 30.0%
AAAAAAAGGTTGGGTGAAAA+AGG + chr4_4:65397080-65397099 Msa0695720:CDS 30.0%
TGAAAAAGGTTCAACAAGAA+TGG + chr4_4:65397094-65397113 Msa0695720:CDS 30.0%
AGAAAGAAAGATAATGTACC+CGG - chr4_4:65397141-65397160 None:intergenic 30.0%
ATGATGCTTAAACTCGAATT+AGG + chr4_4:65397235-65397254 Msa0695720:intron 30.0%
!! GTCTCTTAGCCATTTTAAAA+AGG + chr4_4:65397291-65397310 Msa0695720:intron 30.0%
!! GAAACCAGAATTTGATTTTG+CGG + chr4_4:65397419-65397438 Msa0695720:intron 30.0%
ATATCCGCAAAATCAAATTC+TGG - chr4_4:65397426-65397445 None:intergenic 30.0%
! TAAACAAAATTGGTGGTAGT+TGG + chr4_4:65397461-65397480 Msa0695720:intron 30.0%
ATAAAATCTTAAATGGCCCT+CGG - chr4_4:65397574-65397593 None:intergenic 30.0%
GAACATAAATAGAGTCTGTT+TGG - chr4_4:65397727-65397746 None:intergenic 30.0%
AACTACACTTAAAAGCTTAC+AGG - chr4_4:65397872-65397891 None:intergenic 30.0%
TAAAGTAAGGCTTCTCATTA+AGG - chr4_4:65398193-65398212 None:intergenic 30.0%
! AGATGTGGTAATTTTACCTT+GGG - chr4_4:65398335-65398354 None:intergenic 30.0%
! TAGATGTGGTAATTTTACCT+TGG - chr4_4:65398336-65398355 None:intergenic 30.0%
!!! ATAAACCTTATTTTCATGGG+AGG - chr4_4:65398369-65398388 None:intergenic 30.0%
! ACAAGCCAAAAGTATATGTT+TGG - chr4_4:65398485-65398504 None:intergenic 30.0%
ATCAATTCCCTTATCACAAA+AGG - chr4_4:65398626-65398645 None:intergenic 30.0%
ATATTCAAAGCTGAACCAAA+CGG + chr4_4:65399136-65399155 Msa0695720:intron 30.0%
! AAGTTTGGAATATATTGGTC+GGG - chr4_4:65399191-65399210 None:intergenic 30.0%
GAAGTACAAAATCAAGAGAT+TGG - chr4_4:65399276-65399295 None:intergenic 30.0%
TTGAAGCTGACAGCAAATAA+TGG + chr4_4:65392760-65392779 Msa0695720:five_prime_UTR 35.0%
! ATACCTTTACTAGCTTATGC+TGG + chr4_4:65392797-65392816 Msa0695720:five_prime_UTR 35.0%
AGGATAAATTTGCAGTGGAA+GGG - chr4_4:65392864-65392883 None:intergenic 35.0%
!! TTCTAGAAACCAGCTTTGTT+GGG - chr4_4:65393269-65393288 None:intergenic 35.0%
! ATTCTAGAAACCAGCTTTGT+TGG - chr4_4:65393270-65393289 None:intergenic 35.0%
CAGGTTCAATAGAAATGATG+TGG + chr4_4:65393347-65393366 Msa0695720:intron 35.0%
AAATATTGACCATTCTCCCT+TGG + chr4_4:65393449-65393468 Msa0695720:five_prime_UTR 35.0%
TCAGGTTTATTTGGTACCAA+GGG - chr4_4:65393468-65393487 None:intergenic 35.0%
ATCAGGTTTATTTGGTACCA+AGG - chr4_4:65393469-65393488 None:intergenic 35.0%
!! GAATTTTAGGCTTTGTAGTG+CGG + chr4_4:65393492-65393511 Msa0695720:five_prime_UTR 35.0%
!! AATTTTAGGCTTTGTAGTGC+GGG + chr4_4:65393493-65393512 Msa0695720:five_prime_UTR 35.0%
CAAATTTCCTTTGGCAATCT+CGG + chr4_4:65393516-65393535 Msa0695720:five_prime_UTR 35.0%
! AGTTCAGTAACTTTTGCCAA+AGG - chr4_4:65393610-65393629 None:intergenic 35.0%
! TTCTAAGAGTGACTTCTGAA+TGG - chr4_4:65393701-65393720 None:intergenic 35.0%
AGATAGTTACAAGATGCCAA+AGG - chr4_4:65393749-65393768 None:intergenic 35.0%
!!! TATTTTTTCTCGGTTTCGCA+GGG - chr4_4:65393817-65393836 None:intergenic 35.0%
AGGATAATAGGAACCAATCA+AGG - chr4_4:65393959-65393978 None:intergenic 35.0%
! TTGATTGGTTCCTATTATCC+TGG + chr4_4:65393958-65393977 Msa0695720:five_prime_UTR 35.0%
GTCTAGTCGAGATAATCTTT+CGG + chr4_4:65394024-65394043 Msa0695720:five_prime_UTR 35.0%
TCTAGTCGAGATAATCTTTC+GGG + chr4_4:65394025-65394044 Msa0695720:five_prime_UTR 35.0%
! ATGCTTCAATTTGCTTGAGA+AGG + chr4_4:65394167-65394186 Msa0695720:five_prime_UTR 35.0%
TGTGACAGGCATATAATTGA+TGG + chr4_4:65394420-65394439 Msa0695720:intron 35.0%
! TATGAGTAGTGATTCGGAAT+GGG + chr4_4:65394447-65394466 Msa0695720:CDS 35.0%
! TCAAGTTTAGAGGAAAGCAT+TGG + chr4_4:65394550-65394569 Msa0695720:CDS 35.0%
!! CAAGTTTAGAGGAAAGCATT+GGG + chr4_4:65394551-65394570 Msa0695720:CDS 35.0%
!! AACTTTTGTTCATGGTGATG+TGG + chr4_4:65394603-65394622 Msa0695720:CDS 35.0%
!! GACAAGTGTTGATTTGTTTG+TGG + chr4_4:65394666-65394685 Msa0695720:CDS 35.0%
!! TGTTGATTTGTTTGTGGACT+TGG + chr4_4:65394672-65394691 Msa0695720:CDS 35.0%
GTGGACTTGGAAAATGTTAA+AGG + chr4_4:65394685-65394704 Msa0695720:CDS 35.0%
GTTACTGTATTGTTTGACGA+TGG + chr4_4:65394823-65394842 Msa0695720:CDS 35.0%
CATTGCCTTAGAAAGAGAAA+AGG + chr4_4:65394861-65394880 Msa0695720:CDS 35.0%
TCTGGAAATTTACGAGTCAA+TGG - chr4_4:65394892-65394911 None:intergenic 35.0%
CTTACTATGAGTATGACAAG+AGG + chr4_4:65395240-65395259 Msa0695720:CDS 35.0%
CCTTGTTAACTCTTGTATTG+GGG + chr4_4:65395284-65395303 Msa0695720:CDS 35.0%
! AGACCAAAGTTGACATTTTG+TGG + chr4_4:65395331-65395350 Msa0695720:CDS 35.0%
TTGCCACAAAATGTCAACTT+TGG - chr4_4:65395337-65395356 None:intergenic 35.0%
! GTTGACATTTTGTGGCAAAA+TGG + chr4_4:65395339-65395358 Msa0695720:CDS 35.0%
CAAAATGGTGAACATGGTTT+GGG + chr4_4:65395354-65395373 Msa0695720:CDS 35.0%
! TTTTCCAGTACAAACTGATG+AGG - chr4_4:65395435-65395454 None:intergenic 35.0%
CATCAGTTTGTACTGGAAAA+AGG + chr4_4:65395435-65395454 Msa0695720:CDS 35.0%
!! AGCATACTGTAAAGGTACTA+TGG + chr4_4:65395526-65395545 Msa0695720:CDS 35.0%
CCAAAAAAACAGGAGTAATC+TGG - chr4_4:65395636-65395655 None:intergenic 35.0%
!!! CCAGATTACTCCTGTTTTTT+TGG + chr4_4:65395633-65395652 Msa0695720:CDS 35.0%
TGGTGATATTATGTTCAAGG+CGG + chr4_4:65395653-65395672 Msa0695720:CDS 35.0%
GTCCACATATAGTCAAAGTA+TGG + chr4_4:65395928-65395947 Msa0695720:intron 35.0%
TTTCGGATTGATAAACACGA+AGG + chr4_4:65396158-65396177 Msa0695720:CDS 35.0%
AAGTCTACCTTCTGATAAGA+AGG + chr4_4:65396223-65396242 Msa0695720:CDS 35.0%
AGTCTACCTTCTGATAAGAA+GGG + chr4_4:65396224-65396243 Msa0695720:CDS 35.0%
TTATATTGGGCACATGCATT+TGG - chr4_4:65396524-65396543 None:intergenic 35.0%
!! AATGTTCAGGACTTGTTAAG+TGG + chr4_4:65396560-65396579 Msa0695720:intron 35.0%
! CATTTCAAATTTAGGCACTG+AGG - chr4_4:65396726-65396745 None:intergenic 35.0%
CTCAGTGCCTAAATTTGAAA+TGG + chr4_4:65396724-65396743 Msa0695720:CDS 35.0%
TCATGGATCCTAATAACTTC+TGG - chr4_4:65396857-65396876 None:intergenic 35.0%
!! CTGTTGCTTTCTAAAGAAAG+CGG - chr4_4:65396893-65396912 None:intergenic 35.0%
!!! GGACCACCATTTTTTTTATG+AGG + chr4_4:65396958-65396977 Msa0695720:CDS 35.0%
AACGTAGTATGTCACACTAT+AGG - chr4_4:65397020-65397039 None:intergenic 35.0%
TGAGAATGTATATGGCAAGA+TGG + chr4_4:65397328-65397347 Msa0695720:intron 35.0%
TATTATTTAGGCTTGTGCTG+TGG - chr4_4:65397387-65397406 None:intergenic 35.0%
GTGGTAGTTGGAAATAGAAA+TGG + chr4_4:65397473-65397492 Msa0695720:intron 35.0%
!! GGGCCATTTAAGATTTTATC+TGG + chr4_4:65397575-65397594 Msa0695720:intron 35.0%
TCGTGTGTTTGAAGAAAGAA+TGG + chr4_4:65397745-65397764 Msa0695720:CDS 35.0%
CTTTGATATATGTTTCCCTC+CGG + chr4_4:65397829-65397848 Msa0695720:CDS 35.0%
TACACTTAAAAGCTTACAGG+TGG - chr4_4:65397869-65397888 None:intergenic 35.0%
TTCCAGCACCATTGTTTATA+AGG + chr4_4:65397917-65397936 Msa0695720:intron 35.0%
GATCTTTGAACATAAGCGAA+GGG - chr4_4:65397943-65397962 None:intergenic 35.0%
TGATCTTTGAACATAAGCGA+AGG - chr4_4:65397944-65397963 None:intergenic 35.0%
AAGAACTTGAAGAATAGTGG+AGG - chr4_4:65398150-65398169 None:intergenic 35.0%
GAGAAGAACTTGAAGAATAG+TGG - chr4_4:65398153-65398172 None:intergenic 35.0%
TGAGAAGCCTTACTTTAATG+AGG + chr4_4:65398196-65398215 Msa0695720:CDS 35.0%
TAACCAGCCTCATTAAAGTA+AGG - chr4_4:65398206-65398225 None:intergenic 35.0%
GAGGAACTAAAGTATAGATG+TGG - chr4_4:65398350-65398369 None:intergenic 35.0%
TAGTTCCTCCCATGAAAATA+AGG + chr4_4:65398361-65398380 Msa0695720:intron 35.0%
GCTTGTAAAGCATATCTTGA+AGG + chr4_4:65398499-65398518 Msa0695720:CDS 35.0%
! TTCAGTTTTTCCACATCCAA+TGG - chr4_4:65398530-65398549 None:intergenic 35.0%
AACTGAACATGAAAACCAGA+AGG + chr4_4:65398543-65398562 Msa0695720:CDS 35.0%
ACTGAACATGAAAACCAGAA+GGG + chr4_4:65398544-65398563 Msa0695720:CDS 35.0%
! TGTAGAAGCCTTTTGTGATA+AGG + chr4_4:65398615-65398634 Msa0695720:CDS 35.0%
! GTAGAAGCCTTTTGTGATAA+GGG + chr4_4:65398616-65398635 Msa0695720:CDS 35.0%
!! TGAACCAAACACGTTGTTTT+TGG - chr4_4:65398757-65398776 None:intergenic 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr4_4:65398834-65398853 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG - chr4_4:65398865-65398884 None:intergenic 35.0%
TATTCAAAGCTGAACCAAAC+GGG + chr4_4:65399137-65399156 Msa0695720:intron 35.0%
ACTTCTATGATTAGACGTTG+TGG + chr4_4:65399291-65399310 Msa0695720:three_prime_UTR 35.0%
AGACATCATCGTTAAACAGA+TGG - chr4_4:65399404-65399423 None:intergenic 35.0%
!! GAGGTAGGTGTTGTTCAAAT+AGG - chr4_4:65392683-65392702 None:intergenic 40.0%
TATTTGAAGAGGGAAGAGGT+AGG - chr4_4:65392698-65392717 None:intergenic 40.0%
CAGGATAAATTTGCAGTGGA+AGG - chr4_4:65392865-65392884 None:intergenic 40.0%
! GGTTTGGTACTTGATAGTTG+TGG + chr4_4:65392947-65392966 Msa0695720:intron 40.0%
TGAAAAAGGACAGGGAAACA+AGG - chr4_4:65393153-65393172 None:intergenic 40.0%
CATATATCAACTAGGGACTG+TGG + chr4_4:65393171-65393190 Msa0695720:intron 40.0%
TTCACAGCAAGTAGGCAAAA+GGG - chr4_4:65393382-65393401 None:intergenic 40.0%
ATTCACAGCAAGTAGGCAAA+AGG - chr4_4:65393383-65393402 None:intergenic 40.0%
CTTCTTGATTCACAGCAAGT+AGG - chr4_4:65393390-65393409 None:intergenic 40.0%
TATTTGGTACCAAGGGAGAA+TGG - chr4_4:65393461-65393480 None:intergenic 40.0%
! TTCTTTTCCGAGATTGCCAA+AGG - chr4_4:65393526-65393545 None:intergenic 40.0%
GTTTGAAGATTCCTGTGTAC+TGG + chr4_4:65393576-65393595 Msa0695720:five_prime_UTR 40.0%
TGTACTGGACAAATCTCCTT+TGG + chr4_4:65393591-65393610 Msa0695720:five_prime_UTR 40.0%
GTTACTGAACTTCCTTTGGT+TGG + chr4_4:65393619-65393638 Msa0695720:five_prime_UTR 40.0%
AACTTCCTTTGGTTGGATTC+AGG + chr4_4:65393626-65393645 Msa0695720:five_prime_UTR 40.0%
TACTACCTGAATCCAACCAA+AGG - chr4_4:65393634-65393653 None:intergenic 40.0%
TCTTAGAACTCCACCTATTC+TGG + chr4_4:65393713-65393732 Msa0695720:five_prime_UTR 40.0%
!!! CTATTTTTTCTCGGTTTCGC+AGG - chr4_4:65393818-65393837 None:intergenic 40.0%
! ATTGGTTCCTATTATCCTGG+CGG + chr4_4:65393961-65393980 Msa0695720:five_prime_UTR 40.0%
CTAGTCGAGATAATCTTTCG+GGG + chr4_4:65394026-65394045 Msa0695720:five_prime_UTR 40.0%
TAGCTCTCATTCACTGTACT+TGG + chr4_4:65394326-65394345 Msa0695720:intron 40.0%
TTTCCTCTCTATTGTTGCGT+CGG + chr4_4:65394354-65394373 Msa0695720:intron 40.0%
GGATGCTATGAGTAGTGATT+CGG + chr4_4:65394441-65394460 Msa0695720:CDS 40.0%
! CTATGAGTAGTGATTCGGAA+TGG + chr4_4:65394446-65394465 Msa0695720:CDS 40.0%
CGGACAAACTTTCGAAGATT+CGG + chr4_4:65394731-65394750 Msa0695720:CDS 40.0%
! AAGATTCGGTCCATTTCAGA+AGG + chr4_4:65394745-65394764 Msa0695720:CDS 40.0%
ATTATGTAACTAAGGGGCCA+TGG + chr4_4:65394770-65394789 Msa0695720:CDS 40.0%
!! TGCTGATTTAGAAGCGTTGT+AGG - chr4_4:65394962-65394981 None:intergenic 40.0%
TACAACGCTTCTAAATCAGC+AGG + chr4_4:65394961-65394980 Msa0695720:CDS 40.0%
TGGAGAGACAATCAAGATGA+AGG + chr4_4:65395000-65395019 Msa0695720:CDS 40.0%
!! CAAGTTTGGTGTGTGTTAAC+TGG + chr4_4:65395043-65395062 Msa0695720:CDS 40.0%
TTCGGATAGCAATTTGACTG+TGG + chr4_4:65395080-65395099 Msa0695720:CDS 40.0%
!!! TTTTTGGAATCTTGCCAGCT+TGG - chr4_4:65395114-65395133 None:intergenic 40.0%
CTCATAGTAAGACTTCGTGT+GGG - chr4_4:65395231-65395250 None:intergenic 40.0%
ACTCATAGTAAGACTTCGTG+TGG - chr4_4:65395232-65395251 None:intergenic 40.0%
CCCCAATACAAGAGTTAACA+AGG - chr4_4:65395287-65395306 None:intergenic 40.0%
TTGTGGCAAAATGGTGAACA+TGG + chr4_4:65395348-65395367 Msa0695720:CDS 40.0%
GCAAAATGGTGAACATGGTT+TGG + chr4_4:65395353-65395372 Msa0695720:CDS 40.0%
TTAAGCCTGGCAGTAAAAGA+TGG + chr4_4:65395475-65395494 Msa0695720:CDS 40.0%
TAAGCCTGGCAGTAAAAGAT+GGG + chr4_4:65395476-65395495 Msa0695720:CDS 40.0%
!! CAAACTATTCGGTTTGGACA+TGG - chr4_4:65395562-65395581 None:intergenic 40.0%
CATGTCCAAACCGAATAGTT+TGG + chr4_4:65395560-65395579 Msa0695720:CDS 40.0%
TCCAAACCGAATAGTTTGGA+TGG + chr4_4:65395564-65395583 Msa0695720:CDS 40.0%
TCCATCCAAACTATTCGGTT+TGG - chr4_4:65395568-65395587 None:intergenic 40.0%
TCGTCTCCATCCAAACTATT+CGG - chr4_4:65395573-65395592 None:intergenic 40.0%
TAGTTTGGATGGAGACGAAA+TGG + chr4_4:65395575-65395594 Msa0695720:CDS 40.0%
! TGGTTTCAAAGATGGTGATG+TGG + chr4_4:65395827-65395846 Msa0695720:CDS 40.0%
! TTTCAAAGATGGTGATGTGG+AGG + chr4_4:65395830-65395849 Msa0695720:CDS 40.0%
CAGAAAATCATGGCATACCT+TGG - chr4_4:65395880-65395899 None:intergenic 40.0%
AATACGCAATGCAAGTTCCA+TGG - chr4_4:65395985-65396004 None:intergenic 40.0%
GTGAATGATCCTACTGAACT+TGG + chr4_4:65396016-65396035 Msa0695720:intron 40.0%
ACCTTCTGATAAGAAGGGAA+AGG + chr4_4:65396229-65396248 Msa0695720:CDS 40.0%
ACCTTTCCCTTCTTATCAGA+AGG - chr4_4:65396233-65396252 None:intergenic 40.0%
CAGACATAGAAATCTCAGCT+TGG + chr4_4:65396345-65396364 Msa0695720:intron 40.0%
TCCAGCATATTCCAAACACT+TGG + chr4_4:65396674-65396693 Msa0695720:CDS 40.0%
! ACCAAGTGTTTGGAATATGC+TGG - chr4_4:65396678-65396697 None:intergenic 40.0%
AGCATATTCCAAACACTTGG+TGG + chr4_4:65396677-65396696 Msa0695720:CDS 40.0%
TGAGGAAAATGCTCCTGAAA+TGG - chr4_4:65396708-65396727 None:intergenic 40.0%
GCGGAAAATCATTCTTGTCA+TGG - chr4_4:65396874-65396893 None:intergenic 40.0%
CAATAACGACTGCTACAGAA+AGG - chr4_4:65397211-65397230 None:intergenic 40.0%
ATGTATATGGCAAGATGGCA+TGG + chr4_4:65397333-65397352 Msa0695720:intron 40.0%
ATGTATGCATGTTTGTACCG+AGG + chr4_4:65397554-65397573 Msa0695720:intron 40.0%
TGTATGCATGTTTGTACCGA+GGG + chr4_4:65397555-65397574 Msa0695720:intron 40.0%
AAGAACAACCCGTCATGATA+CGG - chr4_4:65397809-65397828 None:intergenic 40.0%
ACATCACGATGACAACATCA+GGG - chr4_4:65397996-65398015 None:intergenic 40.0%
AACATCACGATGACAACATC+AGG - chr4_4:65397997-65398016 None:intergenic 40.0%
TCGTGATGTTTGAATGCAGA+TGG + chr4_4:65398007-65398026 Msa0695720:intron 40.0%
GTCTGAGTCTCCTAAATACT+TGG + chr4_4:65398090-65398109 Msa0695720:CDS 40.0%
AGTCTCCTAAATACTTGGAC+AGG + chr4_4:65398095-65398114 Msa0695720:CDS 40.0%
TCAAGTTCTTCTCTCTCTAC+AGG + chr4_4:65398160-65398179 Msa0695720:CDS 40.0%
AAGCCTTACTTTAATGAGGC+TGG + chr4_4:65398200-65398219 Msa0695720:CDS 40.0%
GCTGGTTATGACCAACAAAT+AGG + chr4_4:65398218-65398237 Msa0695720:CDS 40.0%
CAACAAATAGGTAGAGCTGA+GGG + chr4_4:65398230-65398249 Msa0695720:CDS 40.0%
ACATAGATTTGGCTGTGACA+AGG - chr4_4:65398292-65398311 None:intergenic 40.0%
! TGTGGTAATTTTACCTTGGG+TGG - chr4_4:65398332-65398351 None:intergenic 40.0%
! ATGTCTGATGCAGCATTTTG+AGG + chr4_4:65398429-65398448 Msa0695720:intron 40.0%
! GCGCTCCAAACATATACTTT+TGG + chr4_4:65398477-65398496 Msa0695720:CDS 40.0%
CTGAACATGAAAACCAGAAG+GGG + chr4_4:65398545-65398564 Msa0695720:CDS 40.0%
AAAAGGCTTCTACAAGCTTG+GGG - chr4_4:65398609-65398628 None:intergenic 40.0%
CAAAAGGCTTCTACAAGCTT+GGG - chr4_4:65398610-65398629 None:intergenic 40.0%
ACAAAAGGCTTCTACAAGCT+TGG - chr4_4:65398611-65398630 None:intergenic 40.0%
TTATCTACTACGGGTCTGTT+TGG + chr4_4:65398677-65398696 Msa0695720:intron 40.0%
CACCCAAAAGCAATTCTCTA+CGG + chr4_4:65398713-65398732 Msa0695720:intron 40.0%
!! CACCGTAGAGAATTGCTTTT+GGG - chr4_4:65398718-65398737 None:intergenic 40.0%
CTAGCCAAAAACAACGTGTT+TGG + chr4_4:65398750-65398769 Msa0695720:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG - chr4_4:65398801-65398820 None:intergenic 40.0%
! GCTTCATGGAGAATTGCTTT+TGG - chr4_4:65398804-65398823 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG - chr4_4:65398818-65398837 None:intergenic 40.0%
TCTCCTTGAACAACGTGTAT+AGG + chr4_4:65398859-65398878 Msa0695720:intron 40.0%
!! CAAGCTTTGGAACCATTGCA+AGG - chr4_4:65392616-65392635 None:intergenic 45.0%
CTTGCAATGGTTCCAAAGCT+TGG + chr4_4:65392614-65392633 Msa0695720:five_prime_UTR 45.0%
!! GAAGATGGTGGAACTGGAAT+TGG + chr4_4:65392650-65392669 Msa0695720:five_prime_UTR 45.0%
GGACCAGCATAAGCTAGTAA+AGG - chr4_4:65392803-65392822 None:intergenic 45.0%
TGCTGGTCCAACCATTTCAA+AGG + chr4_4:65392814-65392833 Msa0695720:five_prime_UTR 45.0%
CAATGATGTCCCAACAAAGC+TGG + chr4_4:65393257-65393276 Msa0695720:intron 45.0%
TAGTGCGGGCAAATTTCCTT+TGG + chr4_4:65393507-65393526 Msa0695720:five_prime_UTR 45.0%
AGGAGATTTGTCCAGTACAC+AGG - chr4_4:65393590-65393609 None:intergenic 45.0%
TAGAACTCCACCTATTCTGG+AGG + chr4_4:65393716-65393735 Msa0695720:five_prime_UTR 45.0%
AGATTTGCCTCCAGAATAGG+TGG - chr4_4:65393726-65393745 None:intergenic 45.0%
AGGAGATTTGCCTCCAGAAT+AGG - chr4_4:65393729-65393748 None:intergenic 45.0%
! TTCTGGAGGCAAATCTCCTT+TGG + chr4_4:65393730-65393749 Msa0695720:five_prime_UTR 45.0%
GCAATTGGGCATATCTCCTT+TGG + chr4_4:65393922-65393941 Msa0695720:five_prime_UTR 45.0%
GCATATCTCCTTTGGCACTT+TGG + chr4_4:65393930-65393949 Msa0695720:five_prime_UTR 45.0%
TTGGTTCCTATTATCCTGGC+GGG + chr4_4:65393962-65393981 Msa0695720:five_prime_UTR 45.0%
CTTCTTTGGCATCAGATCTC+TGG + chr4_4:65393990-65394009 Msa0695720:five_prime_UTR 45.0%
TCAGATCCAAGTGGACAGAT+GGG + chr4_4:65394637-65394656 Msa0695720:CDS 45.0%
TATGGACACTGCGAATCTTC+TGG - chr4_4:65394910-65394929 None:intergenic 45.0%
TTAACCTTTACTCTCTGCCC+TGG - chr4_4:65394937-65394956 None:intergenic 45.0%
ACGCTTCTAAATCAGCAGGA+TGG + chr4_4:65394965-65394984 Msa0695720:CDS 45.0%
AAATCAGCAGGATGGCTATG+TGG + chr4_4:65394973-65394992 Msa0695720:CDS 45.0%
TTGTGCTGTCGATGCAAGTT+TGG + chr4_4:65395029-65395048 Msa0695720:CDS 45.0%
! GTGTGAAAAGCACGACAACA+CGG - chr4_4:65395142-65395161 None:intergenic 45.0%
GTTGAACAGTCTGTTCCTCT+TGG - chr4_4:65395203-65395222 None:intergenic 45.0%
! ACAAGAGGGTGTAAGAGTCA+GGG + chr4_4:65395255-65395274 Msa0695720:CDS 45.0%
TTCACTGGGAGTAAACTCTC+TGG - chr4_4:65395387-65395406 None:intergenic 45.0%
TTGGCCTCATCAGTTTGTAC+TGG + chr4_4:65395428-65395447 Msa0695720:CDS 45.0%
TCTTACGATCCTCTTAAGCC+TGG + chr4_4:65395462-65395481 Msa0695720:CDS 45.0%
! CTTTTACTGCCAGGCTTAAG+AGG - chr4_4:65395474-65395493 None:intergenic 45.0%
AAGCCTGGCAGTAAAAGATG+GGG + chr4_4:65395477-65395496 Msa0695720:CDS 45.0%
! TGCGAAGGAGCATACTGTAA+AGG + chr4_4:65395518-65395537 Msa0695720:CDS 45.0%
TTTGGATGGAGACGAAATGG+AGG + chr4_4:65395578-65395597 Msa0695720:CDS 45.0%
AAGGCGGCTCAAAAACAGTT+TGG + chr4_4:65395669-65395688 Msa0695720:CDS 45.0%
GTCGGGTAATGACATGAATG+CGG + chr4_4:65395719-65395738 Msa0695720:CDS 45.0%
CGGAGGCTGCTCTTAAAAAT+GGG + chr4_4:65395739-65395758 Msa0695720:CDS 45.0%
! TGGTGATGTGGAGGTGAAAT+TGG + chr4_4:65395839-65395858 Msa0695720:CDS 45.0%
TTCATAAGGCGGAACCTGTT+TGG - chr4_4:65396135-65396154 None:intergenic 45.0%
AATCATCTCTTGAGGAGCAG+GGG - chr4_4:65396195-65396214 None:intergenic 45.0%
CAATCATCTCTTGAGGAGCA+GGG - chr4_4:65396196-65396215 None:intergenic 45.0%
TCAATCATCTCTTGAGGAGC+AGG - chr4_4:65396197-65396216 None:intergenic 45.0%
CCTCAAGAGATGATTGAACG+CGG + chr4_4:65396200-65396219 Msa0695720:CDS 45.0%
!! CAGGACTTGTTAAGTGGTGA+TGG + chr4_4:65396566-65396585 Msa0695720:intron 45.0%
! TTCCTTTTTCCTTCCTCGAG+CGG + chr4_4:65396625-65396644 Msa0695720:CDS 45.0%
TGGAAGTTCCACCAAGTGTT+TGG - chr4_4:65396688-65396707 None:intergenic 45.0%
CTTGGTGGAACTTCCATTTC+AGG + chr4_4:65396692-65396711 Msa0695720:CDS 45.0%
CTGCATTGAACCACATCCAA+CGG + chr4_4:65396796-65396815 Msa0695720:CDS 45.0%
GTAGATTGCAACTCATCCGT+TGG - chr4_4:65396815-65396834 None:intergenic 45.0%
CATCCTTGAGAGAAGTCTTC+CGG + chr4_4:65397119-65397138 Msa0695720:CDS 45.0%
ATCCTTGAGAGAAGTCTTCC+GGG + chr4_4:65397120-65397139 Msa0695720:CDS 45.0%
TGCTACAGAAAGGCTTCTCA+TGG - chr4_4:65397201-65397220 None:intergenic 45.0%
CTCATGCGAGCAGTAATTGT+TGG + chr4_4:65397770-65397789 Msa0695720:CDS 45.0%
GCAGTAATTGTTGGTGCAAC+TGG + chr4_4:65397779-65397798 Msa0695720:CDS 45.0%
ACTGGAACTCCGTATCATGA+CGG + chr4_4:65397797-65397816 Msa0695720:CDS 45.0%
AAGCTTACAGGTGGTTCGTT+AGG - chr4_4:65397860-65397879 None:intergenic 45.0%
! GGCCTTATAAACAATGGTGC+TGG - chr4_4:65397922-65397941 None:intergenic 45.0%
! GCGAAGGGCCTTATAAACAA+TGG - chr4_4:65397928-65397947 None:intergenic 45.0%
CAGATGGTGCACTACAATTC+TGG + chr4_4:65398023-65398042 Msa0695720:intron 45.0%
ATGGTGCACTACAATTCTGG+CGG + chr4_4:65398026-65398045 Msa0695720:CDS 45.0%
! TGAAGAATAGTGGAGGTTCC+AGG - chr4_4:65398143-65398162 None:intergenic 45.0%
CCTCAGCTCTACCTATTTGT+TGG - chr4_4:65398232-65398251 None:intergenic 45.0%
CCAACAAATAGGTAGAGCTG+AGG + chr4_4:65398229-65398248 Msa0695720:CDS 45.0%
TCTATTACGAAAGCCACCCA+AGG + chr4_4:65398316-65398335 Msa0695720:CDS 45.0%
!! TATCTTGAAGGCGCTTCCAT+TGG + chr4_4:65398511-65398530 Msa0695720:CDS 45.0%
TTGCAGCTCAACAAACTGAC+TGG - chr4_4:65398650-65398669 None:intergenic 45.0%
!! CGTAGAGAATTGCTTTTGGG+TGG - chr4_4:65398715-65398734 None:intergenic 45.0%
! GCACCGTAGAGAATTGCTTT+TGG - chr4_4:65398719-65398738 None:intergenic 45.0%
! AGAGTGTCTCCTCCTTGCAA+TGG + chr4_4:65392601-65392620 Msa0695720:five_prime_UTR 50.0%
!! GCTTTGGAACCATTGCAAGG+AGG - chr4_4:65392613-65392632 None:intergenic 50.0%
GCAATGGTTCCAAAGCTTGG+TGG + chr4_4:65392617-65392636 Msa0695720:five_prime_UTR 50.0%
!! TCCAAAGCTTGGTGGTGATG+TGG + chr4_4:65392625-65392644 Msa0695720:five_prime_UTR 50.0%
TCCACATCACCACCAAGCTT+TGG - chr4_4:65392629-65392648 None:intergenic 50.0%
! GGTGGTGATGTGGAAGAAGA+TGG + chr4_4:65392635-65392654 Msa0695720:five_prime_UTR 50.0%
GGTGATGTGGAAGAAGATGG+TGG + chr4_4:65392638-65392657 Msa0695720:five_prime_UTR 50.0%
!! GTGGAAGAAGATGGTGGAAC+TGG + chr4_4:65392644-65392663 Msa0695720:five_prime_UTR 50.0%
! CAAGGACTCCAAAGTGCCAA+AGG - chr4_4:65393941-65393960 None:intergenic 50.0%
!! GGCACTTTGGAGTCCTTGAT+TGG + chr4_4:65393943-65393962 Msa0695720:five_prime_UTR 50.0%
GATTTGCCCGCCAGGATAAT+AGG - chr4_4:65393971-65393990 None:intergenic 50.0%
ATGCCGACGCAACAATAGAG+AGG - chr4_4:65394360-65394379 None:intergenic 50.0%
CTGTCCACTTGGATCTGACA+CGG - chr4_4:65394635-65394654 None:intergenic 50.0%
GTCAGATCCAAGTGGACAGA+TGG + chr4_4:65394636-65394655 Msa0695720:CDS 50.0%
ATCCAAGTGGACAGATGGGA+AGG + chr4_4:65394641-65394660 Msa0695720:CDS 50.0%
TCCAAGTGGACAGATGGGAA+GGG + chr4_4:65394642-65394661 Msa0695720:CDS 50.0%
TCGCAGTGTCCATACTATCC+AGG + chr4_4:65394916-65394935 Msa0695720:CDS 50.0%
CGCAGTGTCCATACTATCCA+GGG + chr4_4:65394917-65394936 Msa0695720:CDS 50.0%
ACTCTCTGCCCTGGATAGTA+TGG - chr4_4:65394928-65394947 None:intergenic 50.0%
CTATCCAGGGCAGAGAGTAA+AGG + chr4_4:65394930-65394949 Msa0695720:CDS 50.0%
CAGGATGGCTATGTGGAACT+TGG + chr4_4:65394980-65394999 Msa0695720:CDS 50.0%
! CTGGCTCGCTTCTGTTCTTT+CGG + chr4_4:65395062-65395081 Msa0695720:CDS 50.0%
TTGGAATCTTGCCAGCTTGG+TGG - chr4_4:65395111-65395130 None:intergenic 50.0%
! CGACAACACGGTCAGGTTTT+TGG - chr4_4:65395130-65395149 None:intergenic 50.0%
! AAAAGCACGACAACACGGTC+AGG - chr4_4:65395137-65395156 None:intergenic 50.0%
! CGTGCTTTTCACACGCAAAC+TGG + chr4_4:65395148-65395167 Msa0695720:CDS 50.0%
! GACAAGAGGGTGTAAGAGTC+AGG + chr4_4:65395254-65395273 Msa0695720:CDS 50.0%
! ACACCCCATCTTTTACTGCC+AGG - chr4_4:65395483-65395502 None:intergenic 50.0%
!! ATGGGGTGTTGTCCAATGTG+TGG + chr4_4:65395494-65395513 Msa0695720:CDS 50.0%
TGTCCAATGTGTGGATGCGA+AGG + chr4_4:65395503-65395522 Msa0695720:CDS 50.0%
TGGGTGCTCAACTAGTTCGT+AGG - chr4_4:65395616-65395635 None:intergenic 50.0%
GGGTAATGACATGAATGCGG+AGG + chr4_4:65395722-65395741 Msa0695720:CDS 50.0%
GCGGAGGCTGCTCTTAAAAA+TGG + chr4_4:65395738-65395757 Msa0695720:CDS 50.0%
AGCGCAGGTAACAGTCATCA+GGG - chr4_4:65395791-65395810 None:intergenic 50.0%
! CGCTGTGTTGGCACTGTTAT+TGG + chr4_4:65395807-65395826 Msa0695720:CDS 50.0%
GTGGAGGTGAAATTGGCTAC+TGG + chr4_4:65395846-65395865 Msa0695720:CDS 50.0%
!! GGCTACTGGTTTCACAACCA+AGG + chr4_4:65395860-65395879 Msa0695720:CDS 50.0%
TGGCGCAATCCAAGTTCAGT+AGG - chr4_4:65396028-65396047 None:intergenic 50.0%
CCGCGTTCAATCATCTCTTG+AGG - chr4_4:65396203-65396222 None:intergenic 50.0%
AAAAGTTCAAAGGCCGCTCG+AGG - chr4_4:65396641-65396660 None:intergenic 50.0%
TGCAACTCATCCGTTGGATG+TGG - chr4_4:65396809-65396828 None:intergenic 50.0%
TACCCGGAAGACTTCTCTCA+AGG - chr4_4:65397125-65397144 None:intergenic 50.0%
TTAGGCTTGTGCTGTGGCAA+TGG - chr4_4:65397381-65397400 None:intergenic 50.0%
CTGGAACTCCGTATCATGAC+GGG + chr4_4:65397798-65397817 Msa0695720:CDS 50.0%
GTTCGTTAGGATACTCCGGA+GGG - chr4_4:65397847-65397866 None:intergenic 50.0%
GGTGGTTCGTTAGGATACTC+CGG - chr4_4:65397851-65397870 None:intergenic 50.0%
TGGTGCACTACAATTCTGGC+GGG + chr4_4:65398027-65398046 Msa0695720:CDS 50.0%
CTGCGCCTGTCCAAGTATTT+AGG - chr4_4:65398103-65398122 None:intergenic 50.0%
CTAAATACTTGGACAGGCGC+AGG + chr4_4:65398101-65398120 Msa0695720:CDS 50.0%
!!! GATGCAGCATTTTGAGGCAC+TGG + chr4_4:65398435-65398454 Msa0695720:intron 50.0%
CTCTCAATGTAGTGCCCGTT+TGG - chr4_4:65399154-65399173 None:intergenic 50.0%
!! TCGCAGGGTAGCTTGTTGGA+AGG - chr4_4:65393802-65393821 None:intergenic 55.0%
! GGTTTCGCAGGGTAGCTTGT+TGG - chr4_4:65393806-65393825 None:intergenic 55.0%
CCAAAGAAGATTTGCCCGCC+AGG - chr4_4:65393979-65393998 None:intergenic 55.0%
! CCTGGCGGGCAAATCTTCTT+TGG + chr4_4:65393976-65393995 Msa0695720:five_prime_UTR 55.0%
CTCACTACTGCTGCTGTCAC+TGG - chr4_4:65394479-65394498 None:intergenic 55.0%
CAGTGACAGCAGCAGTAGTG+AGG + chr4_4:65394477-65394496 Msa0695720:CDS 55.0%
TGCTCCGTGTCAGATCCAAG+TGG + chr4_4:65394628-65394647 Msa0695720:CDS 55.0%
ACCCTTCCCATCTGTCCACT+TGG - chr4_4:65394646-65394665 None:intergenic 55.0%
GTAACTAAGGGGCCATGGCT+CGG + chr4_4:65394775-65394794 Msa0695720:CDS 55.0%
TCACACGCAAACTGGCAGCT+TGG + chr4_4:65395156-65395175 Msa0695720:CDS 55.0%
! CAAACTGGCAGCTTGGTGAC+TGG + chr4_4:65395163-65395182 Msa0695720:CDS 55.0%
GTGCATGGTTGCAGACCAAG+AGG + chr4_4:65395185-65395204 Msa0695720:CDS 55.0%
GCTCCTTCGCATCCACACAT+TGG - chr4_4:65395509-65395528 None:intergenic 55.0%
CAGCGCAGGTAACAGTCATC+AGG - chr4_4:65395792-65395811 None:intergenic 55.0%
GACTGTTACCTGCGCTGTGT+TGG + chr4_4:65395795-65395814 Msa0695720:CDS 55.0%
TAACAGTGCCAACACAGCGC+AGG - chr4_4:65395806-65395825 None:intergenic 55.0%
AGTCACCGTCACCAGAGACA+CGG + chr4_4:65397268-65397287 Msa0695720:intron 55.0%
GGTTCGTTAGGATACTCCGG+AGG - chr4_4:65397848-65397867 None:intergenic 55.0%
!! GGCTCTGAAGTGTGGAATCC+TGG + chr4_4:65398122-65398141 Msa0695720:CDS 55.0%
!!! GCAGCATTTTGAGGCACTGG+TGG + chr4_4:65398438-65398457 Msa0695720:intron 55.0%
!! GAAGGCGCTTCCATTGGATG+TGG + chr4_4:65398517-65398536 Msa0695720:CDS 55.0%
AACCAGAAGGGGACTTCTGC+AGG + chr4_4:65398556-65398575 Msa0695720:CDS 55.0%
ATCCTGCAGAAGTCCCCTTC+TGG - chr4_4:65398561-65398580 None:intergenic 55.0%
!! ATGGCTCGGTCGGGCTCAAA+GGG + chr4_4:65394789-65394808 Msa0695720:CDS 60.0%
CTGTGGATGCTCCACCAAGC+TGG + chr4_4:65395097-65395116 Msa0695720:CDS 60.0%
! GCAGCTTGGTGACTGGTGCA+TGG + chr4_4:65395170-65395189 Msa0695720:CDS 60.0%
GGCCGCTCGAGGAAGGAAAA+AGG - chr4_4:65396630-65396649 None:intergenic 60.0%
GTTCAAAGGCCGCTCGAGGA+AGG - chr4_4:65396637-65396656 None:intergenic 60.0%
GTCACCGTCACCAGAGACAC+GGG + chr4_4:65397269-65397288 Msa0695720:intron 60.0%
GAGACCCGTGTCTCTGGTGA+CGG - chr4_4:65397276-65397295 None:intergenic 60.0%
GGCTAAGAGACCCGTGTCTC+TGG - chr4_4:65397282-65397301 None:intergenic 60.0%
!! CTAAGGGGCCATGGCTCGGT+CGG + chr4_4:65394779-65394798 Msa0695720:CDS 65.0%
!! TAAGGGGCCATGGCTCGGTC+GGG + chr4_4:65394780-65394799 Msa0695720:CDS 65.0%
CTTTGAGCCCGACCGAGCCA+TGG - chr4_4:65394790-65394809 None:intergenic 65.0%
!! CATGGCTCGGTCGGGCTCAA+AGG + chr4_4:65394788-65394807 Msa0695720:CDS 65.0%
CGGTCGGGCTCAAAGGGTTG+TGG + chr4_4:65394795-65394814 Msa0695720:CDS 65.0%
!! CAGGCGCAGGCTCTGAAGTG+TGG + chr4_4:65398114-65398133 Msa0695720:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 65392517 65399450 65392517 ID=Msa0695720;Name=Msa0695720
chr4_4 mRNA 65392517 65399450 65392517 ID=Msa0695720-mRNA-1;Parent=Msa0695720;Name=Msa0695720-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1169|1|1|1|0.66|0.6|10|297|912
chr4_4 exon 65392517 65392835 65392517 ID=Msa0695720-mRNA-1:exon:18845;Parent=Msa0695720-mRNA-1
chr4_4 exon 65393350 65394188 65393350 ID=Msa0695720-mRNA-1:exon:18846;Parent=Msa0695720-mRNA-1
chr4_4 exon 65394428 65395881 65394428 ID=Msa0695720-mRNA-1:exon:18847;Parent=Msa0695720-mRNA-1
chr4_4 exon 65396140 65396250 65396140 ID=Msa0695720-mRNA-1:exon:18848;Parent=Msa0695720-mRNA-1
chr4_4 exon 65396569 65397003 65396569 ID=Msa0695720-mRNA-1:exon:18849;Parent=Msa0695720-mRNA-1
chr4_4 exon 65397078 65397141 65397078 ID=Msa0695720-mRNA-1:exon:18850;Parent=Msa0695720-mRNA-1
chr4_4 exon 65397732 65397871 65397732 ID=Msa0695720-mRNA-1:exon:18851;Parent=Msa0695720-mRNA-1
chr4_4 exon 65398026 65398337 65398026 ID=Msa0695720-mRNA-1:exon:18852;Parent=Msa0695720-mRNA-1
chr4_4 exon 65398442 65398687 65398442 ID=Msa0695720-mRNA-1:exon:18853;Parent=Msa0695720-mRNA-1
chr4_4 exon 65399166 65399450 65399166 ID=Msa0695720-mRNA-1:exon:18854;Parent=Msa0695720-mRNA-1
chr4_4 five_prime_UTR 65392517 65392835 65392517 ID=Msa0695720-mRNA-1:five_prime_utr;Parent=Msa0695720-mRNA-1
chr4_4 five_prime_UTR 65393350 65394188 65393350 ID=Msa0695720-mRNA-1:five_prime_utr;Parent=Msa0695720-mRNA-1
chr4_4 five_prime_UTR 65394428 65394438 65394428 ID=Msa0695720-mRNA-1:five_prime_utr;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65394439 65395881 65394439 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65396140 65396250 65396140 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65396569 65397003 65396569 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65397078 65397141 65397078 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65397732 65397871 65397732 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65398026 65398337 65398026 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 CDS 65398442 65398675 65398442 ID=Msa0695720-mRNA-1:cds;Parent=Msa0695720-mRNA-1
chr4_4 three_prime_UTR 65398676 65398687 65398676 ID=Msa0695720-mRNA-1:three_prime_utr;Parent=Msa0695720-mRNA-1
chr4_4 three_prime_UTR 65399166 65399450 65399166 ID=Msa0695720-mRNA-1:three_prime_utr;Parent=Msa0695720-mRNA-1
Gene Sequence

>Msa0695720

ATGGATGCTATGAGTAGTGATTCGGAATGGGAGAGTTCCAGTGACAGCAGCAGTAGTGAGGATCAAGAAGAAATTGATTTTCAATATGGTGGTCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGAACTTTTGTTCATGGTGATGTGGTCTGCTCCGTGTCAGATCCAAGTGGACAGATGGGAAGGGTGACAAGTGTTGATTTGTTTGTGGACTTGGAAAATGTTAAAGGAAAGGTATTAAAAAATGTAAACTCGGACAAACTTTCGAAGATTCGGTCCATTTCAGAAGGTGATTATGTAACTAAGGGGCCATGGCTCGGTCGGGCTCAAAGGGTTGTGGACAAAGTTACTGTATTGTTTGACGATGGAGCTAAATCCGATATCATTGCCTTAGAAAGAGAAAAGGTTTTACCATTGACTCGTAAATTTCCAGAAGATTCGCAGTGTCCATACTATCCAGGGCAGAGAGTAAAGGTTAAGTCCTACAACGCTTCTAAATCAGCAGGATGGCTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTGCTGTCGATGCAAGTTTGGTGTGTGTTAACTGGCTCGCTTCTGTTCTTTCGGATAGCAATTTGACTGTGGATGCTCCACCAAGCTGGCAAGATTCCAAAAACCTGACCGTGTTGTCGTGCTTTTCACACGCAAACTGGCAGCTTGGTGACTGGTGCATGGTTGCAGACCAAGAGGAACAGACTGTTCAACATGCACCCACACGAAGTCTTACTATGAGTATGACAAGAGGGTGTAAGAGTCAGGGAAGAAACCTTGTTAACTCTTGTATTGGGGAATTTTTTATAATTGGGAAGATAAAGACCAAAGTTGACATTTTGTGGCAAAATGGTGAACATGGTTTGGGATTAAATCCAGAGAGTTTACTCCCAGTGAATGTTATAAACACACATGAATTTTGGCCTCATCAGTTTGTACTGGAAAAAGGTGTTTCTTACGATCCTCTTAAGCCTGGCAGTAAAAGATGGGGTGTTGTCCAATGTGTGGATGCGAAGGAGCATACTGTAAAGGTACTATGGAAAACTGTTTCCATGTCCAAACCGAATAGTTTGGATGGAGACGAAATGGAGGAAACTGTGAGTGCCTACGAACTAGTTGAGCACCCAGATTACTCCTGTTTTTTTGGTGATATTATGTTCAAGGCGGCTCAAAAACAGTTTGGTTACCAAGCTGATAAAGATACAGAAAAGTCGGGTAATGACATGAATGCGGAGGCTGCTCTTAAAAATGGGAACCAAATGAATTATCAAGATGACTTCCCTGATGACTGTTACCTGCGCTGTGTTGGCACTGTTATTGGTTTCAAAGATGGTGATGTGGAGGTGAAATTGGCTACTGGTTTCACAACCAAGGTTCCGCCTTATGAAATTTTTCGGATTGATAAACACGAAGGTGCAACTGTAACCCCTGCTCCTCAAGAGATGATTGAACGCGGAAGTCTACCTTCTGATAAGAAGGGAAAGGACTTGTTAAGTGGTGATGGTAGAAAAGAGAATTTGGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCTCGAGCGGCCTTTGAACTTTTTTCCAGTATTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCAGTGCCTAAATTTGAAATGGATAATGAATCAGATTATCCTGATAAGAAAGATTTGGAAACTTGTAATTTCTGCATTGAACCACATCCAACGGATGAGTTGCAATCTACTGAAGACAGAACTTCATATCCAGAAGTTATTAGGATCCATGACAAGAATGATTTTCCGCTTTCTTTAGAAAGCAACAGTTCAAACCAGTTTAAGCAGTTTGATGTTATAGAAAGTTGTTCTGAGGACCACCATTTTTTTTATGAGGGAAAAGAATTGTCAACATTGCAGGTAAAAAAAGGTTGGGTGAAAAAGGTTCAACAAGAATGGAGCATCCTTGAGAGAAGTCTTCCGGACTCTATTTATGTTCGTGTGTTTGAAGAAAGAATGGATCTCATGCGAGCAGTAATTGTTGGTGCAACTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCGGAGTATCCTAACGAACCACCTATGGTGCACTACAATTCTGGCGGGCTCCGCTTAAATCCTAATTTATATGAATCAGGGAAAATCTGTCTGAGTCTCCTAAATACTTGGACAGGCGCAGGCTCTGAAGTGTGGAATCCTGGAACCTCCACTATTCTTCAAGTTCTTCTCTCTCTACAGGCTCTTGTCCTTAATGAGAAGCCTTACTTTAATGAGGCTGGTTATGACCAACAAATAGGTAGAGCTGAGGGAGAGAAAAATTCTGTGAGCTATAATGAGAATGCTTTCCTTGTCACAGCCAAATCTATGTTGTATCTATTACGAAAGCCACCCAAGCATTTTGAGGCACTGGTGGAAGAGCACTTCGAAAAGCGCTCCAAACATATACTTTTGGCTTGTAAAGCATATCTTGAAGGCGCTTCCATTGGATGTGGAAAAACTGAACATGAAAACCAGAAGGGGACTTCTGCAGGATTTAAAATAATGCTTGCTAAGCTCTTCCCCAAGCTTGTAGAAGCCTTTTGTGATAAGGGAATTGATTCCAGTCAGTTTGTTGAGCTGCAAGAATAA
Protein sequence

>Msa0695720

MDAMSSDSEWESSSDSSSSEDQEEIDFQYGGQAQSILSSLEESIGKIDDFLSFERTFVHGDVVCSVSDPSGQMGRVTSVDLFVDLENVKGKVLKNVNSDKLSKIRSISEGDYVTKGPWLGRAQRVVDKVTVLFDDGAKSDIIALEREKVLPLTRKFPEDSQCPYYPGQRVKVKSYNASKSAGWLCGTWRDNQDEGTVCAVDASLVCVNWLASVLSDSNLTVDAPPSWQDSKNLTVLSCFSHANWQLGDWCMVADQEEQTVQHAPTRSLTMSMTRGCKSQGRNLVNSCIGEFFIIGKIKTKVDILWQNGEHGLGLNPESLLPVNVINTHEFWPHQFVLEKGVSYDPLKPGSKRWGVVQCVDAKEHTVKVLWKTVSMSKPNSLDGDEMEETVSAYELVEHPDYSCFFGDIMFKAAQKQFGYQADKDTEKSGNDMNAEAALKNGNQMNYQDDFPDDCYLRCVGTVIGFKDGDVEVKLATGFTTKVPPYEIFRIDKHEGATVTPAPQEMIERGSLPSDKKGKDLLSGDGRKENLEQNLECSSFFLPRAAFELFSSIKSSIFQTLGGTSISGAFSSVPKFEMDNESDYPDKKDLETCNFCIEPHPTDELQSTEDRTSYPEVIRIHDKNDFPLSLESNSSNQFKQFDVIESCSEDHHFFYEGKELSTLQVKKGWVKKVQQEWSILERSLPDSIYVRVFEERMDLMRAVIVGATGTPYHDGLFFFDICFPPEYPNEPPMVHYNSGGLRLNPNLYESGKICLSLLNTWTGAGSEVWNPGTSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTAKSMLYLLRKPPKHFEALVEEHFEKRSKHILLACKAYLEGASIGCGKTEHENQKGTSAGFKIMLAKLFPKLVEAFCDKGIDSSQFVELQE*