Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972880 | XP_003618349.1 | 91.291 | 333 | 28 | 1 | 1 | 333 | 1 | 332 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972880 | sp|P29136|MEP1_SOYBN | 40.636 | 283 | 136 | 6 | 51 | 330 | 48 | 301 | 4.74e-63 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972880 | G7KJD9 | 91.291 | 333 | 28 | 1 | 1 | 333 | 1 | 332 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612660 | Msa0972880 | 0.814604 | 1.415866e-51 | -8.615850e-47 |
| Msa0695720 | Msa0972880 | 0.800999 | 1.107411e-48 | -8.615850e-47 |
| Msa0471070 | Msa0972880 | 0.803603 | 3.221159e-49 | -8.615850e-47 |
| Msa0476420 | Msa0972880 | 0.801592 | 8.370936e-49 | -8.615850e-47 |
| Msa0478400 | Msa0972880 | 0.801217 | 9.991383e-49 | -8.615850e-47 |
| Msa0245660 | Msa0972880 | 0.802040 | 6.775327e-49 | -8.615850e-47 |
| Msa0322460 | Msa0972880 | 0.818387 | 2.013132e-52 | -8.615850e-47 |
| Msa0870170 | Msa0972880 | 0.916160 | 2.486309e-85 | -8.615850e-47 |
| Msa0903420 | Msa0972880 | 0.901245 | 3.254557e-78 | -8.615850e-47 |
| Msa0935870 | Msa0972880 | 0.982786 | 5.370594e-156 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972880 | MtrunA17_Chr6g0451671 | 91.291 | 333 | 28 | 1 | 1 | 333 | 1 | 332 | 0.0 | 622 |
| Msa0972880 | MtrunA17_Chr5g0414891 | 36.455 | 299 | 153 | 6 | 43 | 330 | 53 | 325 | 4.94e-58 | 191 |
| Msa0972880 | MtrunA17_Chr8g0334661 | 38.255 | 298 | 147 | 7 | 42 | 330 | 37 | 306 | 2.22e-55 | 184 |
| Msa0972880 | MtrunA17_Chr8g0364281 | 34.375 | 352 | 171 | 9 | 6 | 330 | 44 | 362 | 6.52e-53 | 179 |
| Msa0972880 | MtrunA17_Chr5g0399301 | 36.207 | 290 | 147 | 9 | 48 | 330 | 54 | 312 | 4.63e-51 | 173 |
| Msa0972880 | MtrunA17_Chr5g0414641 | 31.164 | 292 | 153 | 10 | 47 | 330 | 67 | 318 | 7.19e-35 | 129 |
| Msa0972880 | MtrunA17_Chr5g0414771 | 29.545 | 264 | 140 | 9 | 54 | 309 | 3 | 228 | 1.73e-25 | 103 |
| Msa0972880 | MtrunA17_Chr5g0414657 | 27.586 | 290 | 175 | 9 | 49 | 334 | 55 | 313 | 2.91e-23 | 98.6 |
| Msa0972880 | MtrunA17_Chr5g0414654 | 26.217 | 267 | 137 | 6 | 49 | 309 | 37 | 249 | 5.20e-21 | 91.7 |
| Msa0972880 | MtrunA17_Chr5g0414661 | 26.224 | 286 | 162 | 11 | 58 | 330 | 35 | 284 | 4.03e-20 | 89.4 |
| Msa0972880 | MtrunA17_Chr5g0414791 | 27.703 | 296 | 150 | 13 | 31 | 309 | 57 | 305 | 2.39e-18 | 85.1 |
| Msa0972880 | MtrunA17_Chr5g0414821 | 25.776 | 322 | 163 | 13 | 40 | 330 | 96 | 372 | 1.75e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972880 | AT1G59970.1 | 37.162 | 296 | 156 | 6 | 40 | 330 | 43 | 313 | 4.37e-60 | 197 |
| Msa0972880 | AT4G16640.1 | 39.175 | 291 | 148 | 6 | 42 | 330 | 55 | 318 | 4.69e-56 | 186 |
| Msa0972880 | AT1G70170.1 | 34.311 | 341 | 176 | 8 | 13 | 330 | 8 | 323 | 2.93e-53 | 179 |
| Msa0972880 | AT1G24140.1 | 36.184 | 304 | 154 | 8 | 44 | 330 | 48 | 328 | 7.11e-53 | 179 |
| Msa0972880 | AT2G45040.1 | 35.976 | 328 | 148 | 10 | 13 | 330 | 20 | 295 | 2.03e-47 | 163 |
Find 81 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACTCAACAATGGAAAA+TGG | 0.249546 | 6_4:+5220777 | None:intergenic |
| TAGCATCATGTTGAACATTT+AGG | 0.265192 | 6_4:+5220634 | None:intergenic |
| TTTCTAAAAGGAGCAATAAA+AGG | 0.267257 | 6_4:+5220802 | None:intergenic |
| GGTCTTCATGCTGGATTGTT+GGG | 0.280757 | 6_4:-5219178 | Msa0972880:CDS |
| CAAAAGGGACAAACACTAAA+AGG | 0.294871 | 6_4:-5220696 | Msa0972880:CDS |
| AAGTGGAGCCTTCCATCTTC+TGG | 0.306584 | 6_4:+5220144 | None:intergenic |
| TACTGTGTCCAAGCCCTAAA+AGG | 0.314707 | 6_4:+5219071 | None:intergenic |
| TCTCCTTACACCTGCCCAAT+AGG | 0.318351 | 6_4:+5219024 | None:intergenic |
| TTGCCGTAGCCGTTGGTCTT+TGG | 0.323120 | 6_4:+5219137 | None:intergenic |
| AGGGATACATAGCTGCATTT+TGG | 0.323892 | 6_4:+5219044 | None:intergenic |
| ATGCAGCTATGTATCCCTAT+TGG | 0.324355 | 6_4:-5219039 | Msa0972880:CDS |
| TGACTATGTTTAGGCAAATC+AGG | 0.324771 | 6_4:+5220468 | None:intergenic |
| TACGGCAAAACAATTTGATT+TGG | 0.328072 | 6_4:-5219122 | Msa0972880:CDS |
| ATCTGTGGCTTTGCATGAAA+TGG | 0.342954 | 6_4:-5219098 | Msa0972880:CDS |
| TCTTCCAAGACTCACCAAAA+TGG | 0.357094 | 6_4:-5220407 | Msa0972880:CDS |
| CTTTGTTTGTGACTATGTTT+AGG | 0.357411 | 6_4:+5220459 | None:intergenic |
| ACTTTGATGGAGACGAAAAC+TGG | 0.368546 | 6_4:-5220125 | Msa0972880:CDS |
| CTTAAGACTTGTGGGATTGT+TGG | 0.378391 | 6_4:+5220101 | None:intergenic |
| CAAAATGGAGAGACTCAAAA+AGG | 0.380859 | 6_4:-5220392 | Msa0972880:CDS |
| ATTTCACATTCACGGAAGTT+GGG | 0.387217 | 6_4:-5220269 | Msa0972880:CDS |
| AGGTCTTCATGCTGGATTGT+TGG | 0.390597 | 6_4:-5219179 | Msa0972880:CDS |
| CTCCTTACACCTGCCCAATA+GGG | 0.395717 | 6_4:+5219025 | None:intergenic |
| GATGGAAGGCTCCACTTTGA+TGG | 0.398360 | 6_4:-5220138 | Msa0972880:CDS |
| AAGTTATCCTTAAGACTTGT+GGG | 0.410453 | 6_4:+5220093 | None:intergenic |
| AAGTGTTGATGTGTTGAGTA+TGG | 0.416250 | 6_4:-5220346 | Msa0972880:CDS |
| TACCATCACCTACATGTAAC+TGG | 0.419014 | 6_4:-5220543 | Msa0972880:CDS |
| CAACAATCCCACAAGTCTTA+AGG | 0.419763 | 6_4:-5220100 | Msa0972880:CDS |
| GATTTCACATTCACGGAAGT+TGG | 0.420328 | 6_4:-5220270 | Msa0972880:CDS |
| AAACCTCAAAGGTGTTCAAA+AGG | 0.423946 | 6_4:-5220712 | Msa0972880:CDS |
| TGCAGCTATGTATCCCTATT+GGG | 0.424514 | 6_4:-5219038 | Msa0972880:CDS |
| ACATTTCCTGGCCCATCAAA+AGG | 0.433183 | 6_4:+5220186 | None:intergenic |
| GTATGAGCTAGAACATTTCC+TGG | 0.435265 | 6_4:+5220174 | None:intergenic |
| ATTATTTCAGGTCTTCATGC+TGG | 0.444176 | 6_4:-5219187 | Msa0972880:intron |
| ATCCCTATTGGGCAGGTGTA+AGG | 0.446624 | 6_4:-5219027 | Msa0972880:CDS |
| TGATTCCATCCACATCATCT+TGG | 0.462472 | 6_4:+5218993 | None:intergenic |
| AGTTAGTGATTTCACATTCA+CGG | 0.469287 | 6_4:-5220277 | Msa0972880:CDS |
| ACAAGTCTTAAGGATAACTT+TGG | 0.471399 | 6_4:-5220090 | Msa0972880:intron |
| CATACTTTCCCTCCAGAAGA+TGG | 0.473529 | 6_4:-5220156 | Msa0972880:CDS |
| ACAATTTGATTTGGAATCTG+TGG | 0.478019 | 6_4:-5219113 | Msa0972880:CDS |
| GTGAAATCCGATCACTATAT+CGG | 0.481999 | 6_4:+5220233 | None:intergenic |
| CGTAGCCGTTGGTCTTTGGA+AGG | 0.484074 | 6_4:+5219141 | None:intergenic |
| AGTTTGGATGAATGAATCCT+TGG | 0.493372 | 6_4:+5220740 | None:intergenic |
| GTATGCTTGAAAATCTTTGA+GGG | 0.495671 | 6_4:+5220563 | None:intergenic |
| GGTATGCTTGAAAATCTTTG+AGG | 0.514066 | 6_4:+5220562 | None:intergenic |
| GTCTTCATGCTGGATTGTTG+GGG | 0.519679 | 6_4:-5219177 | Msa0972880:CDS |
| AACCTCAAAGGTGTTCAAAA+GGG | 0.530859 | 6_4:-5220711 | Msa0972880:CDS |
| GCTATGTATCCCTATTGGGC+AGG | 0.543151 | 6_4:-5219034 | Msa0972880:CDS |
| CAAACAAAGTGGTTTAGAGA+AGG | 0.546779 | 6_4:-5220445 | Msa0972880:CDS |
| AAAATGGTCGTTTAGAGTAG+TGG | 0.547135 | 6_4:+5220605 | None:intergenic |
| TCTGTGGCTTTGCATGAAAT+GGG | 0.554545 | 6_4:-5219097 | Msa0972880:CDS |
| CATTTCCTGGCCCATCAAAA+GGG | 0.556591 | 6_4:+5220187 | None:intergenic |
| AGATGATGTGGATGGAATCA+TGG | 0.557045 | 6_4:-5218990 | Msa0972880:CDS |
| GGACAAACACTAAAAGGCAT+TGG | 0.557998 | 6_4:-5220690 | Msa0972880:CDS |
| AAAGTTATCCTTAAGACTTG+TGG | 0.558696 | 6_4:+5220092 | None:intergenic |
| CAAACTCTTCAAAACCTCAA+AGG | 0.558738 | 6_4:-5220723 | Msa0972880:CDS |
| AAGAACCATAAAACCTTCCA+AGG | 0.561044 | 6_4:-5220757 | Msa0972880:CDS |
| CTAAACCAAGATGATGTGGA+TGG | 0.563005 | 6_4:-5218998 | Msa0972880:CDS |
| TGGATGAATGAATCCTTGGA+AGG | 0.563353 | 6_4:+5220744 | None:intergenic |
| GACTATGTTTAGGCAAATCA+GGG | 0.568078 | 6_4:+5220469 | None:intergenic |
| TTTCACATTCACGGAAGTTG+GGG | 0.569728 | 6_4:-5220268 | Msa0972880:CDS |
| TGGTCGTTTAGAGTAGTGGA+AGG | 0.570994 | 6_4:+5220609 | None:intergenic |
| ATCTTGAGTCTTCCACGTTG+TGG | 0.572692 | 6_4:-5220495 | Msa0972880:CDS |
| CTTCCAAAGACCAACGGCTA+CGG | 0.579541 | 6_4:-5219140 | Msa0972880:CDS |
| AAGGAGCAATAAAAGGAAAG+AGG | 0.580832 | 6_4:+5220809 | None:intergenic |
| AAATCTAAACCAAGATGATG+TGG | 0.581039 | 6_4:-5219002 | Msa0972880:CDS |
| TCATGCTGGATTGTTGGGGA+AGG | 0.584729 | 6_4:-5219173 | Msa0972880:CDS |
| TGGAGCCTTCCATCTTCTGG+AGG | 0.591987 | 6_4:+5220147 | None:intergenic |
| TATGGTTCTTGACTCAACAA+TGG | 0.593809 | 6_4:+5220770 | None:intergenic |
| GGATTTCACCATGGTGATCA+CGG | 0.597300 | 6_4:-5220219 | Msa0972880:CDS |
| AAACATAGTCACAAACAAAG+TGG | 0.601641 | 6_4:-5220456 | Msa0972880:CDS |
| GTAGCCGTTGGTCTTTGGAA+GGG | 0.606243 | 6_4:+5219142 | None:intergenic |
| CTTTCCCTCCAGAAGATGGA+AGG | 0.609700 | 6_4:-5220152 | Msa0972880:CDS |
| AACTCGACCGATATAGTGAT+CGG | 0.611162 | 6_4:-5220240 | Msa0972880:CDS |
| GATCACTATATCGGTCGAGT+TGG | 0.619534 | 6_4:+5220242 | None:intergenic |
| GGAGCCTTCCATCTTCTGGA+GGG | 0.638922 | 6_4:+5220148 | None:intergenic |
| GACCAGTTACATGTAGGTGA+TGG | 0.653297 | 6_4:+5220541 | None:intergenic |
| TATTCCCTTCCAAAGACCAA+CGG | 0.657183 | 6_4:-5219146 | Msa0972880:CDS |
| AAATATCACCGTGATCACCA+TGG | 0.688526 | 6_4:+5220211 | None:intergenic |
| CTACACGACCAGTTACATGT+AGG | 0.697312 | 6_4:+5220535 | None:intergenic |
| ATAGTGATCGGATTTCACCA+TGG | 0.731745 | 6_4:-5220228 | Msa0972880:CDS |
| AAATCAGGGACACCACAACG+TGG | 0.781696 | 6_4:+5220483 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_4:5219995-5220014 | None:intergenic | 0.0% |
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_4:5219995-5220014 | None:intergenic | 0.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_4:5220266-5220285 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_4:5220278-5220297 | Msa0972880:CDS | 10.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_4:5220266-5220285 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_4:5220278-5220297 | Msa0972880:CDS | 10.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_4:5219147-5219166 | Msa0972880:CDS | 15.0% |
| !! | CTTTATCATCTAATAAAAAA+AGG | - | chr6_4:5219844-5219863 | Msa0972880:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_4:5220200-5220219 | Msa0972880:CDS | 15.0% |
| !!! | AGTATTTTTAAAAAAAACTC+TGG | - | chr6_4:5220452-5220471 | Msa0972880:CDS | 15.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_4:5219147-5219166 | Msa0972880:CDS | 15.0% |
| !! | CTTTATCATCTAATAAAAAA+AGG | - | chr6_4:5219844-5219863 | Msa0972880:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_4:5220200-5220219 | Msa0972880:CDS | 15.0% |
| !!! | AGTATTTTTAAAAAAAACTC+TGG | - | chr6_4:5220452-5220471 | Msa0972880:CDS | 15.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_4:5220291-5220310 | Msa0972880:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_4:5220292-5220311 | Msa0972880:CDS | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+CGG | - | chr6_4:5220478-5220497 | Msa0972880:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_4:5220529-5220548 | None:intergenic | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_4:5220608-5220627 | Msa0972880:CDS | 20.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_4:5220291-5220310 | Msa0972880:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_4:5220292-5220311 | Msa0972880:CDS | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+CGG | - | chr6_4:5220478-5220497 | Msa0972880:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_4:5220529-5220548 | None:intergenic | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_4:5220608-5220627 | Msa0972880:CDS | 20.0% |
| !! | TTTCTAAAAGGAGCAATAAA+AGG | + | chr6_4:5219008-5219027 | None:intergenic | 25.0% |
| !!! | TGGAAAATGGATTTTCTAAA+AGG | + | chr6_4:5219020-5219039 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_4:5219221-5219240 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_4:5220115-5220134 | Msa0972880:CDS | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_4:5220224-5220243 | Msa0972880:CDS | 25.0% |
| !! | TTTCTAAAAGGAGCAATAAA+AGG | + | chr6_4:5219008-5219027 | None:intergenic | 25.0% |
| !!! | TGGAAAATGGATTTTCTAAA+AGG | + | chr6_4:5219020-5219039 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_4:5219221-5219240 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_4:5220115-5220134 | Msa0972880:CDS | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_4:5220224-5220243 | Msa0972880:CDS | 25.0% |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_4:5219158-5219177 | None:intergenic | 30.0% |
| TAGCATCATGTTGAACATTT+AGG | + | chr6_4:5219176-5219195 | None:intergenic | 30.0% | |
| GTATGCTTGAAAATCTTTGA+GGG | + | chr6_4:5219247-5219266 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+AGG | + | chr6_4:5219307-5219326 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTGACTATGTTT+AGG | + | chr6_4:5219351-5219370 | None:intergenic | 30.0% |
| AAACATAGTCACAAACAAAG+TGG | - | chr6_4:5219351-5219370 | Msa0972880:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_4:5219530-5219549 | Msa0972880:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_4:5219610-5219629 | Msa0972880:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_4:5219717-5219736 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_4:5219718-5219737 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_4:5219717-5219736 | Msa0972880:intron | 30.0% | |
| TCTCTGCTTCATATTATAAG+TGG | - | chr6_4:5219938-5219957 | Msa0972880:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_4:5220221-5220240 | Msa0972880:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr6_4:5220378-5220397 | Msa0972880:CDS | 30.0% | |
| !!! | TTACCACCAGTAGATTTTTT+TGG | + | chr6_4:5220428-5220447 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_4:5220685-5220704 | Msa0972880:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_4:5220694-5220713 | Msa0972880:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_4:5220805-5220824 | Msa0972880:CDS | 30.0% | |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_4:5219158-5219177 | None:intergenic | 30.0% |
| TAGCATCATGTTGAACATTT+AGG | + | chr6_4:5219176-5219195 | None:intergenic | 30.0% | |
| GTATGCTTGAAAATCTTTGA+GGG | + | chr6_4:5219247-5219266 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+AGG | + | chr6_4:5219307-5219326 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTGACTATGTTT+AGG | + | chr6_4:5219351-5219370 | None:intergenic | 30.0% |
| AAACATAGTCACAAACAAAG+TGG | - | chr6_4:5219351-5219370 | Msa0972880:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_4:5219530-5219549 | Msa0972880:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_4:5219610-5219629 | Msa0972880:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_4:5219717-5219736 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_4:5219718-5219737 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_4:5219717-5219736 | Msa0972880:intron | 30.0% | |
| TCTCTGCTTCATATTATAAG+TGG | - | chr6_4:5219938-5219957 | Msa0972880:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_4:5220221-5220240 | Msa0972880:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr6_4:5220378-5220397 | Msa0972880:CDS | 30.0% | |
| !!! | TTACCACCAGTAGATTTTTT+TGG | + | chr6_4:5220428-5220447 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_4:5220685-5220704 | Msa0972880:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_4:5220694-5220713 | Msa0972880:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_4:5220805-5220824 | Msa0972880:CDS | 30.0% | |
| AAGGAGCAATAAAAGGAAAG+AGG | + | chr6_4:5219001-5219020 | None:intergenic | 35.0% | |
| CTTGACTCAACAATGGAAAA+TGG | + | chr6_4:5219033-5219052 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_4:5219040-5219059 | None:intergenic | 35.0% | |
| AAGAACCATAAAACCTTCCA+AGG | - | chr6_4:5219050-5219069 | Msa0972880:CDS | 35.0% | |
| ! | TGAATCCTTGGAAGGTTTTA+TGG | + | chr6_4:5219058-5219077 | None:intergenic | 35.0% |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_4:5219070-5219089 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_4:5219086-5219105 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_4:5219084-5219103 | Msa0972880:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_4:5219095-5219114 | Msa0972880:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_4:5219096-5219115 | Msa0972880:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_4:5219111-5219130 | Msa0972880:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_4:5219205-5219224 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_4:5219215-5219234 | Msa0972880:intron | 35.0% |
| GGTATGCTTGAAAATCTTTG+AGG | + | chr6_4:5219248-5219267 | None:intergenic | 35.0% | |
| GACTATGTTTAGGCAAATCA+GGG | + | chr6_4:5219341-5219360 | None:intergenic | 35.0% | |
| TGACTATGTTTAGGCAAATC+AGG | + | chr6_4:5219342-5219361 | None:intergenic | 35.0% | |
| CAAACAAAGTGGTTTAGAGA+AGG | - | chr6_4:5219362-5219381 | Msa0972880:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_4:5219417-5219436 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_4:5219415-5219434 | Msa0972880:intron | 35.0% | |
| !! | AAGTGTTGATGTGTTGAGTA+TGG | - | chr6_4:5219461-5219480 | Msa0972880:intron | 35.0% |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_4:5219538-5219557 | Msa0972880:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_4:5219577-5219596 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_4:5219609-5219628 | Msa0972880:intron | 35.0% |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_4:5220324-5220343 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_4:5220325-5220344 | Msa0972880:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr6_4:5220383-5220402 | Msa0972880:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_4:5220620-5220639 | Msa0972880:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_4:5220723-5220742 | Msa0972880:CDS | 35.0% |
| AAGGAGCAATAAAAGGAAAG+AGG | + | chr6_4:5219001-5219020 | None:intergenic | 35.0% | |
| CTTGACTCAACAATGGAAAA+TGG | + | chr6_4:5219033-5219052 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_4:5219040-5219059 | None:intergenic | 35.0% | |
| AAGAACCATAAAACCTTCCA+AGG | - | chr6_4:5219050-5219069 | Msa0972880:CDS | 35.0% | |
| ! | TGAATCCTTGGAAGGTTTTA+TGG | + | chr6_4:5219058-5219077 | None:intergenic | 35.0% |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_4:5219070-5219089 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_4:5219086-5219105 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_4:5219084-5219103 | Msa0972880:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_4:5219095-5219114 | Msa0972880:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_4:5219096-5219115 | Msa0972880:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_4:5219111-5219130 | Msa0972880:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_4:5219205-5219224 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_4:5219215-5219234 | Msa0972880:intron | 35.0% |
| GGTATGCTTGAAAATCTTTG+AGG | + | chr6_4:5219248-5219267 | None:intergenic | 35.0% | |
| GACTATGTTTAGGCAAATCA+GGG | + | chr6_4:5219341-5219360 | None:intergenic | 35.0% | |
| TGACTATGTTTAGGCAAATC+AGG | + | chr6_4:5219342-5219361 | None:intergenic | 35.0% | |
| CAAACAAAGTGGTTTAGAGA+AGG | - | chr6_4:5219362-5219381 | Msa0972880:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_4:5219417-5219436 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_4:5219415-5219434 | Msa0972880:intron | 35.0% | |
| !! | AAGTGTTGATGTGTTGAGTA+TGG | - | chr6_4:5219461-5219480 | Msa0972880:intron | 35.0% |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_4:5219538-5219557 | Msa0972880:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_4:5219577-5219596 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_4:5219609-5219628 | Msa0972880:intron | 35.0% |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_4:5220324-5220343 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_4:5220325-5220344 | Msa0972880:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr6_4:5220383-5220402 | Msa0972880:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_4:5220620-5220639 | Msa0972880:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_4:5220723-5220742 | Msa0972880:CDS | 35.0% |
| TGGATGAATGAATCCTTGGA+AGG | + | chr6_4:5219066-5219085 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_4:5219117-5219136 | Msa0972880:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_4:5219264-5219283 | Msa0972880:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_4:5219400-5219419 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_4:5219400-5219419 | Msa0972880:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_4:5219502-5219521 | Msa0972880:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_4:5219537-5219556 | Msa0972880:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_4:5219539-5219558 | Msa0972880:intron | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_4:5219567-5219586 | Msa0972880:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_4:5219579-5219598 | Msa0972880:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_4:5219599-5219618 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_4:5219636-5219655 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_4:5219683-5219702 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_4:5219682-5219701 | Msa0972880:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_4:5219709-5219728 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_4:5219707-5219726 | Msa0972880:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr6_4:5220384-5220403 | Msa0972880:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr6_4:5220385-5220404 | Msa0972880:CDS | 40.0% | |
| !!! | CCAGTAGATTTTTTTGGTGG+TGG | + | chr6_4:5220422-5220441 | None:intergenic | 40.0% |
| CCACCACCAAAAAAATCTAC+TGG | - | chr6_4:5220419-5220438 | Msa0972880:CDS | 40.0% | |
| !!! | CCACCAGTAGATTTTTTTGG+TGG | + | chr6_4:5220425-5220444 | None:intergenic | 40.0% |
| CCACCAAAAAAATCTACTGG+TGG | - | chr6_4:5220422-5220441 | Msa0972880:CDS | 40.0% | |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_4:5220661-5220680 | Msa0972880:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_4:5220709-5220728 | Msa0972880:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_4:5220710-5220729 | Msa0972880:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_4:5220722-5220741 | Msa0972880:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_4:5220766-5220785 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_4:5220768-5220787 | Msa0972880:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_4:5220769-5220788 | Msa0972880:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_4:5220809-5220828 | Msa0972880:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_4:5220817-5220836 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_4:5220817-5220836 | Msa0972880:CDS | 40.0% | |
| TGGATGAATGAATCCTTGGA+AGG | + | chr6_4:5219066-5219085 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_4:5219117-5219136 | Msa0972880:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_4:5219264-5219283 | Msa0972880:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_4:5219400-5219419 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_4:5219400-5219419 | Msa0972880:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_4:5219502-5219521 | Msa0972880:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_4:5219537-5219556 | Msa0972880:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_4:5219539-5219558 | Msa0972880:intron | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_4:5219567-5219586 | Msa0972880:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_4:5219579-5219598 | Msa0972880:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_4:5219599-5219618 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_4:5219636-5219655 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_4:5219683-5219702 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_4:5219682-5219701 | Msa0972880:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_4:5219709-5219728 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_4:5219707-5219726 | Msa0972880:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr6_4:5220384-5220403 | Msa0972880:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr6_4:5220385-5220404 | Msa0972880:CDS | 40.0% | |
| !!! | CCAGTAGATTTTTTTGGTGG+TGG | + | chr6_4:5220422-5220441 | None:intergenic | 40.0% |
| CCACCACCAAAAAAATCTAC+TGG | - | chr6_4:5220419-5220438 | Msa0972880:CDS | 40.0% | |
| !!! | CCACCAGTAGATTTTTTTGG+TGG | + | chr6_4:5220425-5220444 | None:intergenic | 40.0% |
| CCACCAAAAAAATCTACTGG+TGG | - | chr6_4:5220422-5220441 | Msa0972880:CDS | 40.0% | |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_4:5220661-5220680 | Msa0972880:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_4:5220709-5220728 | Msa0972880:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_4:5220710-5220729 | Msa0972880:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_4:5220722-5220741 | Msa0972880:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_4:5220766-5220785 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_4:5220768-5220787 | Msa0972880:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_4:5220769-5220788 | Msa0972880:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_4:5220809-5220828 | Msa0972880:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_4:5220817-5220836 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_4:5220817-5220836 | Msa0972880:CDS | 40.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_4:5219101-5219120 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_4:5219201-5219220 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_4:5219269-5219288 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_4:5219275-5219294 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_4:5219312-5219331 | Msa0972880:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_4:5219407-5219426 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_4:5219568-5219587 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_4:5219588-5219607 | Msa0972880:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_4:5219615-5219634 | Msa0972880:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_4:5219623-5219642 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_4:5219624-5219643 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_4:5219651-5219670 | Msa0972880:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr6_4:5220356-5220375 | Msa0972880:CDS | 45.0% |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_4:5220628-5220647 | Msa0972880:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_4:5220629-5220648 | Msa0972880:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_4:5220630-5220649 | Msa0972880:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_4:5220680-5220699 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_4:5220739-5220758 | None:intergenic | 45.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_4:5219101-5219120 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_4:5219201-5219220 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_4:5219269-5219288 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_4:5219275-5219294 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_4:5219312-5219331 | Msa0972880:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_4:5219407-5219426 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_4:5219568-5219587 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_4:5219588-5219607 | Msa0972880:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_4:5219615-5219634 | Msa0972880:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_4:5219623-5219642 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_4:5219624-5219643 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_4:5219651-5219670 | Msa0972880:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr6_4:5220356-5220375 | Msa0972880:CDS | 45.0% |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_4:5220628-5220647 | Msa0972880:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_4:5220629-5220648 | Msa0972880:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_4:5220630-5220649 | Msa0972880:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_4:5220680-5220699 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_4:5220739-5220758 | None:intergenic | 45.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_4:5219327-5219346 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_4:5219655-5219674 | Msa0972880:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_4:5219666-5219685 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_4:5219669-5219688 | Msa0972880:intron | 50.0% | |
| CATCGTGAGCTTAGCTCAGT+TGG | - | chr6_4:5220351-5220370 | Msa0972880:CDS | 50.0% | |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_4:5220634-5220653 | Msa0972880:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_4:5220668-5220687 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_4:5220667-5220686 | Msa0972880:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_4:5220728-5220747 | Msa0972880:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_4:5220773-5220792 | Msa0972880:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_4:5220780-5220799 | Msa0972880:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_4:5220785-5220804 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_4:5220786-5220805 | None:intergenic | 50.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_4:5219327-5219346 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_4:5219655-5219674 | Msa0972880:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_4:5219666-5219685 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_4:5219669-5219688 | Msa0972880:intron | 50.0% | |
| CATCGTGAGCTTAGCTCAGT+TGG | - | chr6_4:5220351-5220370 | Msa0972880:CDS | 50.0% | |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_4:5220634-5220653 | Msa0972880:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_4:5220668-5220687 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_4:5220667-5220686 | Msa0972880:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_4:5220728-5220747 | Msa0972880:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_4:5220773-5220792 | Msa0972880:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_4:5220780-5220799 | Msa0972880:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_4:5220785-5220804 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_4:5220786-5220805 | None:intergenic | 50.0% | |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_4:5219662-5219681 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_4:5219663-5219682 | None:intergenic | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_4:5220669-5220688 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_4:5220673-5220692 | None:intergenic | 55.0% |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_4:5219662-5219681 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_4:5219663-5219682 | None:intergenic | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_4:5220669-5220688 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_4:5220673-5220692 | None:intergenic | 55.0% |
| CAAGGTCCGGGGTTCGAACT+CGG | - | chr6_4:5220396-5220415 | Msa0972880:CDS | 60.0% | |
| CAAGGTCCGGGGTTCGAACT+CGG | - | chr6_4:5220396-5220415 | Msa0972880:CDS | 60.0% | |
| TGGTGGCCGAGTTCGAACCC+CGG | + | chr6_4:5220405-5220424 | None:intergenic | 65.0% | |
| TGGTGGCCGAGTTCGAACCC+CGG | + | chr6_4:5220405-5220424 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 5218967 | 5220862 | 5218967 | ID=Msa0972880;Name=Msa0972880 |
| chr6_4 | mRNA | 5218967 | 5220862 | 5218967 | ID=Msa0972880-mRNA-1;Parent=Msa0972880;Name=Msa0972880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|334 |
| chr6_4 | exon | 5220091 | 5220862 | 5220091 | ID=Msa0972880-mRNA-1:exon:2249;Parent=Msa0972880-mRNA-1 |
| chr6_4 | exon | 5218967 | 5219199 | 5218967 | ID=Msa0972880-mRNA-1:exon:2248;Parent=Msa0972880-mRNA-1 |
| chr6_4 | CDS | 5220091 | 5220862 | 5220091 | ID=Msa0972880-mRNA-1:cds;Parent=Msa0972880-mRNA-1 |
| chr6_4 | CDS | 5218967 | 5219199 | 5218967 | ID=Msa0972880-mRNA-1:cds;Parent=Msa0972880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
