AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0557930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557930 MtrunA17_Chr4g0047301 94.748 914 37 2 1 903 1 914 0.0 1758
Msa0557930 MtrunA17_Chr2g0282211 68.392 908 256 9 22 903 22 924 0.0 1213
Msa0557930 MtrunA17_Chr1g0211131 37.613 662 342 17 294 903 428 1070 3.10e-125 404
Msa0557930 MtrunA17_Chr1g0211131 44.286 210 115 2 42 250 92 300 4.58e-44 173
Msa0557930 MtrunA17_Chr4g0009054 54.128 327 127 3 347 664 3 315 2.08e-103 323
Msa0557930 MtrunA17_Chr1g0198021 53.137 271 110 5 637 893 108 375 4.31e-90 291
Msa0557930 MtrunA17_Chr2g0317631 52.518 278 114 6 637 899 277 551 5.11e-85 285
Msa0557930 MtrunA17_Chr8g0376201 55.411 231 93 2 636 857 160 389 2.85e-84 278
Msa0557930 MtrunA17_Chr8g0360171 53.333 270 109 5 637 892 472 738 2.87e-79 273
Msa0557930 MtrunA17_Chr2g0317641 63.218 174 62 1 687 858 1 174 4.07e-75 243
Msa0557930 MtrunA17_Chr8g0376111 48.963 241 98 4 622 853 10 234 3.69e-69 233
Msa0557930 MtrunA17_Chr7g0233611 48.214 224 106 2 639 853 7 229 1.09e-64 220
Msa0557930 MtrunA17_Chr4g0045101 46.058 241 105 4 622 853 4 228 6.83e-64 218
Msa0557930 MtrunA17_Chr7g0222941 57.955 176 62 3 637 803 61 233 2.83e-63 213
Msa0557930 MtrunA17_Chr7g0233631 43.529 255 118 5 622 867 5 242 1.64e-62 214
Msa0557930 MtrunA17_Chr2g0285321 47.196 214 103 5 687 892 1 212 4.26e-51 178
Msa0557930 MtrunA17_Chr2g0317611 58.772 114 35 3 637 741 64 174 1.27e-38 141
Msa0557930 MtrunA17_Chr2g0317621 50.467 107 51 1 753 857 14 120 4.77e-32 124
Msa0557930 MtrunA17_Chr4g0001491 40.667 150 79 1 677 826 157 296 1.11e-28 117
Msa0557930 MtrunA17_Chr4g0037011 30.000 150 83 5 670 807 4 143 4.09e-12 65.1
Msa0557930 MtrunA17_Chr5g0432831 30.000 150 83 5 670 807 4 143 4.73e-12 64.7
Msa0557930 MtrunA17_Chr8g0378601 36.559 93 47 4 692 783 56 137 6.49e-12 65.1
Msa0557930 MtrunA17_Chr3g0108261 29.333 150 84 5 670 807 4 143 1.70e-11 63.2
Msa0557930 MtrunA17_Chr7g0275361 29.333 150 84 5 670 807 4 143 2.30e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557930 AT2G33770.1 47.692 910 415 15 21 897 20 901 0.0 813
Msa0557930 AT2G16920.1 37.685 674 341 18 290 903 447 1101 6.99e-124 402
Msa0557930 AT2G16920.1 39.768 259 150 4 30 283 118 375 1.59e-51 197
Msa0557930 AT2G16920.2 37.685 674 341 18 290 903 447 1101 6.99e-124 402
Msa0557930 AT2G16920.2 39.768 259 150 4 30 283 118 375 1.59e-51 197
Msa0557930 AT1G53025.1 52.768 271 111 5 637 893 244 511 6.20e-87 288
Msa0557930 AT1G53025.2 52.768 271 111 5 637 893 244 511 1.16e-86 288
Msa0557930 AT3G15355.1 54.783 230 92 3 637 857 305 531 6.70e-81 274
Msa0557930 AT1G53023.1 48.000 275 114 6 637 892 21 285 1.54e-77 255
Msa0557930 AT1G64230.2 30.000 150 83 5 670 807 4 143 5.59e-12 65.1
Msa0557930 AT1G64230.1 30.000 150 83 5 670 807 4 143 5.59e-12 65.1
Msa0557930 AT1G64230.3 32.540 126 72 4 685 807 37 152 6.95e-12 65.1
Msa0557930 AT1G64230.5 31.579 133 78 4 678 807 63 185 1.10e-11 65.1
Msa0557930 AT1G64230.4 31.579 133 78 4 678 807 63 185 1.10e-11 65.1
Msa0557930 AT5G41700.5 29.333 150 84 5 670 807 4 143 3.70e-11 62.4
Msa0557930 AT5G41700.2 29.333 150 84 5 670 807 4 143 3.70e-11 62.4
Msa0557930 AT5G41700.1 29.333 150 84 5 670 807 4 143 3.70e-11 62.4
Msa0557930 AT5G41700.4 30.827 133 79 4 678 807 22 144 3.90e-11 62.4
Msa0557930 AT4G27960.1 32.787 122 63 4 670 782 4 115 4.48e-11 62.4
Msa0557930 AT3G08690.2 31.746 126 73 4 685 807 28 143 6.72e-11 62.0
Msa0557930 AT3G08690.1 31.746 126 73 4 685 807 28 143 6.72e-11 62.0
Msa0557930 AT5G53300.2 32.787 122 63 4 670 782 4 115 7.05e-11 61.6
Msa0557930 AT5G53300.4 32.787 122 63 4 670 782 4 115 7.05e-11 61.6
Msa0557930 AT5G53300.1 32.787 122 63 4 670 782 4 115 7.05e-11 61.6

Find 291 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTCTATCAGGTTTATT+TGG 0.135335 4_1:-56474588 None:intergenic
TCTTACACTTACTCATAAAT+AGG 0.150905 4_1:-56473646 None:intergenic
CGCTGTGTTGGCACTGTTAT+TGG 0.163936 4_1:+56476926 Msa0557930:CDS
TTATAAACACACATGAATTT+TGG 0.167148 4_1:+56476528 Msa0557930:CDS
ATTCATATAAATTAGGATTT+AGG 0.207672 4_1:-56479172 None:intergenic
TAAAGTAAGGCTTCTCATTA+AGG 0.222829 4_1:-56479307 None:intergenic
GTGGACTTGGAAAATGTTAA+AGG 0.236097 4_1:+56475804 Msa0557930:CDS
TTCCCTGATTCATATAAATT+AGG 0.237543 4_1:-56479179 None:intergenic
CTTCATATCCAGAAGTTATT+AGG 0.238791 4_1:+56477960 Msa0557930:CDS
TATGAGTAAGTGTAAGAAAA+AGG 0.242511 4_1:+56473652 Msa0557930:five_prime_UTR
TCGTTATCCATTTCAAATTT+AGG 0.244038 4_1:-56477845 None:intergenic
AGCAAATAATGGAGTTTCTT+TGG 0.244138 4_1:+56473888 Msa0557930:five_prime_UTR
CTTGGTGGAACTTCCATTTC+AGG 0.247256 4_1:+56477806 Msa0557930:CDS
GTTTCCAAATCTTTCTTATC+AGG 0.252217 4_1:-56477878 None:intergenic
TCTAGTCGAGATAATCTTTC+GGG 0.270138 4_1:+56475138 Msa0557930:five_prime_UTR
ACCTTGTTAACTCTTGTATT+GGG 0.272160 4_1:+56476402 Msa0557930:CDS
CTGCGCCTGTCCAAGTATTT+AGG 0.279333 4_1:-56479217 None:intergenic
TCTTAGAACTCCACCTATTC+TGG 0.281855 4_1:+56474826 Msa0557930:five_prime_UTR
AACTTCCTTTGGTTGGATTC+AGG 0.288084 4_1:+56474740 Msa0557930:five_prime_UTR
ATTTACCCTTAACAAATTCT+TGG 0.288357 4_1:+56473833 Msa0557930:five_prime_UTR
AACCTTGTTAACTCTTGTAT+TGG 0.293332 4_1:+56476401 Msa0557930:CDS
GGCACTTTGGAGTCCTTGAT+TGG 0.297515 4_1:+56475056 Msa0557930:five_prime_UTR
AAAGCCTAAAATTCTCTATC+AGG 0.297661 4_1:-56474597 None:intergenic
CTGGCTCGCTTCTGTTCTTT+CGG 0.300150 4_1:+56476181 Msa0557930:CDS
TGAAATATTTCATTCGCAAT+TGG 0.300733 4_1:+56475020 Msa0557930:five_prime_UTR
CCTGGCGGGCAAATCTTCTT+TGG 0.304204 4_1:+56475089 Msa0557930:five_prime_UTR
AATCCTAATTTATATGAATC+AGG 0.308707 4_1:+56479176 Msa0557930:CDS
GCGCTCCAAACATATACTTT+TGG 0.309942 4_1:+56479594 Msa0557930:CDS
CATGTCCAAACCGAATAGTT+TGG 0.311035 4_1:+56476679 Msa0557930:CDS
TATGGACACTGCGAATCTTC+TGG 0.314809 4_1:-56476026 None:intergenic
ACAAGCCAAAAGTATATGTT+TGG 0.318477 4_1:-56479599 None:intergenic
CTCAGTGCCTAAATTTGAAA+TGG 0.325018 4_1:+56477838 Msa0557930:CDS
GATTTGCCCGCCAGGATAAT+AGG 0.326257 4_1:-56475081 None:intergenic
TGTTGATTTGTTTGTGGACT+TGG 0.327847 4_1:+56475791 Msa0557930:CDS
CAAGTTTGGTGTGTGTTAAC+TGG 0.327864 4_1:+56476162 Msa0557930:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.331175 4_1:-56476044 None:intergenic
GAGCATATTATCAAGTTTAG+AGG 0.332505 4_1:+56475659 Msa0557930:CDS
CATCAGTTTGTACTGGAAAA+AGG 0.334327 4_1:+56476554 Msa0557930:CDS
CATGGCTCGGTCGGGCTCAA+AGG 0.334629 4_1:+56475907 Msa0557930:CDS
CAGATGGTGCACTACAATTC+TGG 0.336019 4_1:+56479140 Msa0557930:intron
GGCCGCTCGAGGAAGGAAAA+AGG 0.340433 4_1:-56477741 None:intergenic
AAAAGTTACTGAACTTCCTT+TGG 0.341025 4_1:+56474729 Msa0557930:five_prime_UTR
GCAGTAATTGTTGGTGCAAC+TGG 0.345129 4_1:+56478897 Msa0557930:CDS
TCTTTCTAAGGCAATGATAT+CGG 0.347103 4_1:-56475973 None:intergenic
TGGAAGTTCCACCAAGTGTT+TGG 0.349299 4_1:-56477799 None:intergenic
AGTCATCTTGATAATTCATT+TGG 0.349814 4_1:-56476883 None:intergenic
GCAAAATGGTGAACATAGTT+TGG 0.354706 4_1:+56476472 Msa0557930:CDS
CCTCAGCTCTACCTATTTGT+TGG 0.355681 4_1:-56479346 None:intergenic
TTATCCTGATAAGAAAGATT+TGG 0.357619 4_1:+56477874 Msa0557930:CDS
TGATGGTAGAAAAGAGAATT+TGG 0.358050 4_1:+56477697 Msa0557930:CDS
TAACATCAAACTGCTTAAAC+TGG 0.358400 4_1:-56478033 None:intergenic
TTGAAGCTGACAGCAAATAA+TGG 0.358589 4_1:+56473877 Msa0557930:five_prime_UTR
CTTACACTTACTCATAAATA+GGG 0.358897 4_1:-56473645 None:intergenic
CTTCTTTGGCATCAGATCTC+TGG 0.362072 4_1:+56475103 Msa0557930:five_prime_UTR
TCGTCTCCATCCAAACTATT+CGG 0.364995 4_1:-56476689 None:intergenic
AAAAGAATTGTCAACATTGC+AGG 0.365225 4_1:+56478096 Msa0557930:CDS
GAAGATGGTGGAACTGGAAT+TGG 0.370713 4_1:+56473766 Msa0557930:five_prime_UTR
CAAAAGGCTTCTACAAGCTT+GGG 0.371194 4_1:-56479724 None:intergenic
TCAAGTTCTTCTCTCTCTAC+AGG 0.375552 4_1:+56479277 Msa0557930:CDS
TACATAATCACCTTCTGAAA+TGG 0.376474 4_1:-56475874 None:intergenic
CAAATTTCCTTTGGCAATCT+CGG 0.376698 4_1:+56474630 Msa0557930:five_prime_UTR
ATCCTGCAGAAGTCCCCTTC+TGG 0.376940 4_1:-56479675 None:intergenic
TCATGGATCCTAATAACTTC+TGG 0.378132 4_1:-56477968 None:intergenic
TCCACATCACCACCAAGCTT+TGG 0.378797 4_1:-56473742 None:intergenic
TGGTGATGTGGAGGTGAAAT+TGG 0.381248 4_1:+56476958 Msa0557930:CDS
GGAATATGCTGGATTTAATA+CGG 0.383493 4_1:-56477778 None:intergenic
GCAATTGGGCATATCTCCTT+TGG 0.387447 4_1:+56475035 Msa0557930:five_prime_UTR
CATCCTTGAGAGAAGTCTTC+CGG 0.389453 4_1:+56478233 Msa0557930:CDS
GAGGTAGGTGTTGTTCAAAT+AGG 0.390767 4_1:-56473796 None:intergenic
GCTGGTTATGACCAACAAAT+AGG 0.391028 4_1:+56479335 Msa0557930:CDS
GAGAAGAACTTGAAGAATAG+TGG 0.392888 4_1:-56479267 None:intergenic
TGAAGAATAGTGGAGGTTCC+AGG 0.394764 4_1:-56479257 None:intergenic
CTAAGGGGCCATGGCTCGGT+CGG 0.396317 4_1:+56475898 Msa0557930:CDS
GAAATATTTCATTCGCAATT+GGG 0.399128 4_1:+56475021 Msa0557930:five_prime_UTR
TGCTGATTTAGAAGCGTTGT+AGG 0.399875 4_1:-56476078 None:intergenic
GACAAGAGGGTGTAAGAGTC+AGG 0.400833 4_1:+56476373 Msa0557930:CDS
TAATAGATACAACATAGATT+TGG 0.401612 4_1:-56479417 None:intergenic
GGCTCTGAAGTGTGGAATCC+TGG 0.402574 4_1:+56479239 Msa0557930:CDS
AGAATGGTCAATATTTAATC+AGG 0.403575 4_1:-56474556 None:intergenic
CAAAATGGTGAACATAGTTT+GGG 0.404147 4_1:+56476473 Msa0557930:CDS
TTGATTGGTTCCTATTATCC+TGG 0.406512 4_1:+56475071 Msa0557930:five_prime_UTR
GCATATCTCCTTTGGCACTT+TGG 0.407548 4_1:+56475043 Msa0557930:five_prime_UTR
TCCATCCAAACTATTCGGTT+TGG 0.408736 4_1:-56476684 None:intergenic
TGTGTGTTTATAACATTCAC+TGG 0.409667 4_1:-56476518 None:intergenic
TTCTGGAGGCAAATCTCCTT+TGG 0.410170 4_1:+56474843 Msa0557930:five_prime_UTR
CTTGCAATGGTTCCAAAGCT+TGG 0.411404 4_1:+56473730 Msa0557930:five_prime_UTR
AAGCTTACAGGTGGTTCGTT+AGG 0.414305 4_1:-56478975 None:intergenic
CAGAATATATTTCTGTTGAA+TGG 0.415657 4_1:+56474524 Msa0557930:five_prime_UTR
ATCAATTCCCTTGTCACAAA+AGG 0.418169 4_1:-56479740 None:intergenic
TGAGGAAAATGCTCCTGAAA+TGG 0.419447 4_1:-56477819 None:intergenic
ATGGCTCGGTCGGGCTCAAA+GGG 0.420283 4_1:+56475908 Msa0557930:CDS
ACCCTTCCCATCTGTCCACT+TGG 0.421233 4_1:-56475762 None:intergenic
AGAAGGTGATTATGTAACTA+AGG 0.421683 4_1:+56475881 Msa0557930:CDS
ATCCTTGAGAGAAGTCTTCC+GGG 0.423857 4_1:+56478234 Msa0557930:CDS
GTCTAGTCGAGATAATCTTT+CGG 0.423878 4_1:+56475137 Msa0557930:five_prime_UTR
AACTACCAAGAATTTGTTAA+GGG 0.424521 4_1:-56473838 None:intergenic
TATGCTGATGATAGCTTCAA+TGG 0.425404 4_1:-56475232 None:intergenic
GTGGAAGAAGATGGTGGAAC+TGG 0.427264 4_1:+56473760 Msa0557930:five_prime_UTR
TATGATATACACCTTTGAAA+TGG 0.428460 4_1:-56473942 None:intergenic
AACCAGAAGGGGACTTCTGC+AGG 0.428580 4_1:+56479673 Msa0557930:CDS
AAATATTGACCATTCTCTCT+TGG 0.437686 4_1:+56474563 Msa0557930:five_prime_UTR
TTGCCACAAAATGTCAACTT+TGG 0.438550 4_1:-56476453 None:intergenic
AAGCCTTACTTTAATGAGGC+TGG 0.438912 4_1:+56479317 Msa0557930:CDS
GACAAGTGTTGATTTGTTTG+TGG 0.439155 4_1:+56475785 Msa0557930:CDS
AAACTACCAAGAATTTGTTA+AGG 0.439419 4_1:-56473839 None:intergenic
GTCTGAGTCTCCTAAATACT+TGG 0.441688 4_1:+56479207 Msa0557930:CDS
CAGGATGGCTATGTGGAACT+TGG 0.442039 4_1:+56476099 Msa0557930:CDS
TAGTGCGGGCAAATTTCCTT+TGG 0.442096 4_1:+56474621 Msa0557930:five_prime_UTR
GTTGAACAGTCTGTTCCTCT+TGG 0.445698 4_1:-56476319 None:intergenic
TTTCTGTATCTTTATCAGCT+TGG 0.448025 4_1:-56476814 None:intergenic
GGTTTCGCAGGGTAGCTTGT+TGG 0.449728 4_1:-56474916 None:intergenic
ATTCACAGCAAGTAGGCAAA+AGG 0.450159 4_1:-56474494 None:intergenic
TAGTTTGGATGGAGACGAAA+TGG 0.451117 4_1:+56476694 Msa0557930:CDS
GTTACTGAACTTCCTTTGGT+TGG 0.451645 4_1:+56474733 Msa0557930:five_prime_UTR
TCAATCATCTCTTGAGGAGC+AGG 0.452258 4_1:-56477313 None:intergenic
CAGCGCAGGTAACAGTCATC+AGG 0.452698 4_1:-56476908 None:intergenic
CTCACTACTGCTGCTGTCAC+TGG 0.452824 4_1:-56475595 None:intergenic
TAAGGGGCCATGGCTCGGTC+GGG 0.453566 4_1:+56475899 Msa0557930:CDS
CGGTCGGGCTCAAAGGGTTG+TGG 0.453882 4_1:+56475914 Msa0557930:CDS
GAATATGCTGGATTTAATAC+GGG 0.456440 4_1:-56477777 None:intergenic
ACAAAAGGCTTCTACAAGCT+TGG 0.456714 4_1:-56479725 None:intergenic
ACCAAGTGTTTGGAATATGC+TGG 0.459562 4_1:-56477789 None:intergenic
TCTGGAAATTTACGAGTCAA+TGG 0.462644 4_1:-56476008 None:intergenic
GTTTGAAGATTCCTGTGTAC+TGG 0.462850 4_1:+56474690 Msa0557930:five_prime_UTR
TGTACTGGACAAATCTCCTT+TGG 0.464578 4_1:+56474705 Msa0557930:five_prime_UTR
TTGGCCTCATCAGTTTGTAC+TGG 0.464675 4_1:+56476547 Msa0557930:CDS
GCTTGTAAAGCATATCTTGA+AGG 0.469930 4_1:+56479616 Msa0557930:CDS
AGGAGATTTGCCTCCAGAAT+AGG 0.471833 4_1:-56474839 None:intergenic
TATCTTGAAGGCGCTTCCAT+TGG 0.473818 4_1:+56479628 Msa0557930:CDS
ACTGTTATTGGTTTCAAAGA+TGG 0.475922 4_1:+56476938 Msa0557930:CDS
TCTTGTGTTTGAAGAAAGAA+TGG 0.475979 4_1:+56478863 Msa0557930:intron
TCGCAGTGTCCATACTATCC+AGG 0.476869 4_1:+56476035 Msa0557930:CDS
CAAACTATTCGGTTTGGACA+TGG 0.477382 4_1:-56476678 None:intergenic
TGAGAAGCCTTACTTTAATG+AGG 0.477468 4_1:+56479313 Msa0557930:CDS
CCCCAATACAAGAGTTAACA+AGG 0.479939 4_1:-56476403 None:intergenic
TAAATATTTGAAGAGGGAAG+AGG 0.480249 4_1:-56473815 None:intergenic
TTGTGCTGTCGATGCAAGTT+TGG 0.480632 4_1:+56476148 Msa0557930:CDS
ATATACACCTTTGAAATGGT+TGG 0.481448 4_1:-56473938 None:intergenic
TTAAGCCTGGCAGTAAAAGA+TGG 0.487073 4_1:+56476594 Msa0557930:CDS
AAGTCTACCTTCTGATAAGA+AGG 0.487556 4_1:+56477342 Msa0557930:CDS
CCAAAGAAGATTTGCCCGCC+AGG 0.488608 4_1:-56475089 None:intergenic
TCAAGTTTAGAGGAAAGCAT+TGG 0.490374 4_1:+56475669 Msa0557930:CDS
CGGACAAACTTTCGAAGATT+CGG 0.491223 4_1:+56475850 Msa0557930:CDS
GTCAGATCCAAGTGGACAGA+TGG 0.493007 4_1:+56475755 Msa0557930:CDS
TGTGACAGGCATATAATTGA+TGG 0.496070 4_1:+56475539 Msa0557930:intron
TATTTGGTACCAAGAGAGAA+TGG 0.497152 4_1:-56474572 None:intergenic
CAAGTTTAGAGGAAAGCATT+GGG 0.497314 4_1:+56475670 Msa0557930:CDS
CATTGCCTTAGAAAGAGAAA+AGG 0.497528 4_1:+56475980 Msa0557930:CDS
AAAAGCACGACAACACGGTC+AGG 0.500051 4_1:-56476253 None:intergenic
ACCTTTCCCTTCTTATCAGA+AGG 0.504832 4_1:-56477349 None:intergenic
AATGTTCAGGACTTGTTAAG+TGG 0.505536 4_1:+56477674 Msa0557930:intron
ATGCTTCAATTTGCTTGAGA+AGG 0.505815 4_1:+56475286 Msa0557930:five_prime_UTR
TGCAACTCATCCGTTGGATG+TGG 0.506708 4_1:-56477920 None:intergenic
TAACCAGCCTCATTAAAGTA+AGG 0.506806 4_1:-56479320 None:intergenic
CAAACTGGCAGCTTGGTGAC+TGG 0.507507 4_1:+56476282 Msa0557930:CDS
CTTTGATATATGTTTCCCTC+CGG 0.513418 4_1:+56478947 Msa0557930:CDS
GATAAAGATACAGAAAAGTC+GGG 0.517044 4_1:+56476821 Msa0557930:CDS
TCTTACGATCCTCTTAAGCC+TGG 0.518535 4_1:+56476581 Msa0557930:CDS
GACTGTTACCTGCGCTGTGT+TGG 0.520842 4_1:+56476914 Msa0557930:CDS
TTGCAACTCAACAAACTGAC+TGG 0.521002 4_1:-56479764 None:intergenic
CTGTGGATGCTCCACCATGC+TGG 0.521980 4_1:+56476216 Msa0557930:CDS
TCACACGCAAACTGGCAGCT+TGG 0.522952 4_1:+56476275 Msa0557930:CDS
GAAGGTGATTATGTAACTAA+GGG 0.524599 4_1:+56475882 Msa0557930:CDS
TGATAAAGATACAGAAAAGT+CGG 0.525150 4_1:+56476820 Msa0557930:CDS
CTCATGCGAGCAGTAATTGT+TGG 0.526875 4_1:+56478888 Msa0557930:CDS
TAAGCCTGGCAGTAAAAGAT+GGG 0.527531 4_1:+56476595 Msa0557930:CDS
GCGGAAAATCATTCTTGTCA+TGG 0.528752 4_1:-56477985 None:intergenic
CTTCTTGATTCACAGCAAGT+AGG 0.530094 4_1:-56474501 None:intergenic
TTAACCTTTACTCTCTGCCC+TGG 0.532334 4_1:-56476053 None:intergenic
TTCACTGGGAGTAAACTCTC+TGG 0.532864 4_1:-56476503 None:intergenic
ATACCTTTACTAGCTTATGC+TGG 0.533296 4_1:+56473914 Msa0557930:five_prime_UTR
CTAAATACTTGGACAGGCGC+AGG 0.533981 4_1:+56479218 Msa0557930:CDS
GGTGGTGATGTGGAAGAAGA+TGG 0.534065 4_1:+56473751 Msa0557930:five_prime_UTR
TATGAGTAGTGATTCGGAAT+GGG 0.535163 4_1:+56475566 Msa0557930:CDS
CCTTGTTAACTCTTGTATTG+GGG 0.535470 4_1:+56476403 Msa0557930:CDS
TAAGGGTAAATATTTGAAGA+GGG 0.535778 4_1:-56473821 None:intergenic
AGGATAATAGGAACCAATCA+AGG 0.536133 4_1:-56475069 None:intergenic
CTGGAACTCCGTATCATGAC+GGG 0.537749 4_1:+56478916 Msa0557930:CDS
GTAGATTGCAACTCATCCGT+TGG 0.540415 4_1:-56477926 None:intergenic
ATCCTAATTTATATGAATCA+GGG 0.540542 4_1:+56479177 Msa0557930:CDS
ATCCAAGTGGACAGATGGGA+AGG 0.540935 4_1:+56475760 Msa0557930:CDS
AGTCTCCTAAATACTTGGAC+AGG 0.541227 4_1:+56479212 Msa0557930:CDS
TTAAGGGTAAATATTTGAAG+AGG 0.541400 4_1:-56473822 None:intergenic
GCAGCTTGGTGACTGGTGCA+TGG 0.542630 4_1:+56476289 Msa0557930:CDS
TGGAGAGACAATCAAGATGA+AGG 0.543990 4_1:+56476119 Msa0557930:CDS
AGCATATTCCAAACACTTGG+TGG 0.546181 4_1:+56477791 Msa0557930:CDS
TTCACAGCAAGTAGGCAAAA+GGG 0.546802 4_1:-56474493 None:intergenic
CTTGGAAAATGTTAAAGGAA+AGG 0.549568 4_1:+56475809 Msa0557930:CDS
GTAACTAAGGGGCCATGGCT+CGG 0.550278 4_1:+56475894 Msa0557930:CDS
TGCTGGTCCAACCATTTCAA+AGG 0.550903 4_1:+56473931 Msa0557930:five_prime_UTR
TTGGTTCCTATTATCCTGGC+GGG 0.551717 4_1:+56475075 Msa0557930:five_prime_UTR
GGATGCTATGAGTAGTGATT+CGG 0.552865 4_1:+56475560 Msa0557930:CDS
CAGGTTCAATAGAAATGATG+TGG 0.553380 4_1:+56474461 Msa0557930:intron
AAGAACAACCCGTCATGATA+CGG 0.555892 4_1:-56478924 None:intergenic
GTGGAGGTGAAATTGGCTAC+TGG 0.556086 4_1:+56476965 Msa0557930:CDS
TTTGGATGGAGACGAAATGG+AGG 0.556480 4_1:+56476697 Msa0557930:CDS
AAGATTCGGTCCATTTCAGA+AGG 0.557165 4_1:+56475864 Msa0557930:CDS
CAGGACTTGTTAAGTGGTGA+TGG 0.557746 4_1:+56477680 Msa0557930:intron
CATATAAATTAGGATTTAGG+CGG 0.558362 4_1:-56479169 None:intergenic
CTATGAGTAGTGATTCGGAA+TGG 0.558640 4_1:+56475565 Msa0557930:CDS
CAATCATCTCTTGAGGAGCA+GGG 0.559511 4_1:-56477312 None:intergenic
GAAGGCGCTTCCATTGGATG+TGG 0.559665 4_1:+56479634 Msa0557930:CDS
TACAACGCTTCTAAATCAGC+AGG 0.560075 4_1:+56476080 Msa0557930:CDS
GTTCAAAGGCCGCTCGAGGA+AGG 0.560557 4_1:-56477748 None:intergenic
TTCTAAGAGTGACTTCTGAA+TGG 0.561818 4_1:-56474811 None:intergenic
CTTTGAGCCCGACCGAGCCA+TGG 0.562374 4_1:-56475906 None:intergenic
TGGTGCACTACAATTCTGGC+GGG 0.562522 4_1:+56479144 Msa0557930:CDS
TCCAGCATATTCCAAACACT+TGG 0.562882 4_1:+56477788 Msa0557930:CDS
CGCAGTGTCCATACTATCCA+GGG 0.563072 4_1:+56476036 Msa0557930:CDS
CCGCGTTCAATCATCTCTTG+AGG 0.564947 4_1:-56477319 None:intergenic
AACATACATGAATAGCAGAA+AGG 0.568486 4_1:-56474670 None:intergenic
TCCAAACCGAATAGTTTGGA+TGG 0.569256 4_1:+56476683 Msa0557930:CDS
GTTACTGTATTGTTTGACGA+TGG 0.570953 4_1:+56475942 Msa0557930:CDS
ACTCATAGTAAGACTTCGTG+TGG 0.579194 4_1:-56476348 None:intergenic
TCGCAGGGTAGCTTGTTGGA+AGG 0.579936 4_1:-56474912 None:intergenic
AGCATACTGTAAAGGTACAA+TGG 0.580129 4_1:+56476645 Msa0557930:CDS
CTGCATTGAACCACATCCAA+CGG 0.580334 4_1:+56477910 Msa0557930:CDS
CAAGGACTCCAAAGTGCCAA+AGG 0.580574 4_1:-56475051 None:intergenic
CTATCCAGGGCAGAGAGTAA+AGG 0.580957 4_1:+56476049 Msa0557930:CDS
GGACCAGCATAAGCTAGTAA+AGG 0.580984 4_1:-56473917 None:intergenic
CTGTTGCTTTCTAAAGAAAG+CGG 0.581297 4_1:-56478004 None:intergenic
ACAAGAGGGTGTAAGAGTCA+GGG 0.584173 4_1:+56476374 Msa0557930:CDS
TCCAAAGCTTGGTGGTGATG+TGG 0.586921 4_1:+56473741 Msa0557930:five_prime_UTR
TCAGATCCAAGTGGACAGAT+GGG 0.587594 4_1:+56475756 Msa0557930:CDS
ATTATGTAACTAAGGGGCCA+TGG 0.589006 4_1:+56475889 Msa0557930:CDS
TGCGAAGGAGCATACTGTAA+AGG 0.590233 4_1:+56476637 Msa0557930:CDS
AACTGAACATGAAAACCAGA+AGG 0.591244 4_1:+56479660 Msa0557930:CDS
GCAATGGTTCCAAAGCTTGG+TGG 0.593236 4_1:+56473733 Msa0557930:five_prime_UTR
GCTCCTTCGCATCCACACAT+TGG 0.595521 4_1:-56476625 None:intergenic
AGGAGATTTGTCCAGTACAC+AGG 0.595632 4_1:-56474701 None:intergenic
AGATTTGCCTCCAGAATAGG+TGG 0.597750 4_1:-56474836 None:intergenic
CAGTGACAGCAGCAGTAGTG+AGG 0.599348 4_1:+56475596 Msa0557930:CDS
AGTCTACCTTCTGATAAGAA+GGG 0.599826 4_1:+56477343 Msa0557930:CDS
CAGGCGCAGGCTCTGAAGTG+TGG 0.599880 4_1:+56479231 Msa0557930:CDS
AGAGTGTCTCCTCCTTGCAA+TGG 0.603740 4_1:+56473717 Msa0557930:five_prime_UTR
TAACAGTGCCAACACAGCGC+AGG 0.604202 4_1:-56476922 None:intergenic
TGGTTTCAAAGATGGTGATG+TGG 0.607004 4_1:+56476946 Msa0557930:CDS
ACCTTCTGATAAGAAGGGAA+AGG 0.610683 4_1:+56477348 Msa0557930:CDS
TACTACCTGAATCCAACCAA+AGG 0.610754 4_1:-56474745 None:intergenic
CTGTCCACTTGGATCTGACA+CGG 0.610789 4_1:-56475751 None:intergenic
AAAAGTTCAAAGGCCGCTCG+AGG 0.610806 4_1:-56477752 None:intergenic
TGTTATAGAAAATTGTTCTG+AGG 0.611871 4_1:+56478051 Msa0557930:CDS
TACCCGGAAGACTTCTCTCA+AGG 0.612300 4_1:-56478236 None:intergenic
GGCTACTGGTTTCACAACCA+AGG 0.613861 4_1:+56476979 Msa0557930:CDS
TTGGAATCTTGCCAGCATGG+TGG 0.615083 4_1:-56476227 None:intergenic
AAATCAGCAGGATGGCTATG+TGG 0.615349 4_1:+56476092 Msa0557930:CDS
CAAGCTTTGGAACCATTGCA+AGG 0.617014 4_1:-56473729 None:intergenic
TTCGGATAGCAATTTGACTG+TGG 0.617830 4_1:+56476199 Msa0557930:CDS
ACTGGAACTCCGTATCATGA+CGG 0.617936 4_1:+56478915 Msa0557930:CDS
GGTGGTTCGTTAGGATACTC+CGG 0.623296 4_1:-56478966 None:intergenic
ACTGAACATGAAAACCAGAA+GGG 0.628542 4_1:+56479661 Msa0557930:CDS
AGATAGTTACAAGATGCCAA+AGG 0.629388 4_1:-56474859 None:intergenic
TGTCCAATGTGTGGATGCGA+AGG 0.629958 4_1:+56476622 Msa0557930:CDS
CTGAACATGAAAACCAGAAG+GGG 0.630377 4_1:+56479662 Msa0557930:CDS
AATCATCTCTTGAGGAGCAG+GGG 0.631754 4_1:-56477311 None:intergenic
ACATAGATTTGGCTGTGACA+AGG 0.632266 4_1:-56479406 None:intergenic
GTGTGTTTATAACATTCACT+GGG 0.634130 4_1:-56476517 None:intergenic
ATGGTGCACTACAATTCTGG+CGG 0.635699 4_1:+56479143 Msa0557930:CDS
GGTGATGTGGAAGAAGATGG+TGG 0.636328 4_1:+56473754 Msa0557930:five_prime_UTR
TCCAAGTGGACAGATGGGAA+GGG 0.638169 4_1:+56475761 Msa0557930:CDS
ATTGGTTCCTATTATCCTGG+CGG 0.639563 4_1:+56475074 Msa0557930:five_prime_UTR
TGGGTGCTCAACTAGTTCGT+AGG 0.642489 4_1:-56476732 None:intergenic
AGCGCAGGTAACAGTCATCA+GGG 0.642525 4_1:-56476907 None:intergenic
AAGAACTTGAAGAATAGTGG+AGG 0.645772 4_1:-56479264 None:intergenic
CATTTCAAATTTAGGCACTG+AGG 0.648291 4_1:-56477837 None:intergenic
TTTCGGATTGATAAACACGA+AGG 0.649683 4_1:+56477277 Msa0557930:CDS
GTGCATGGTTGCAGACCAAG+AGG 0.653228 4_1:+56476304 Msa0557930:CDS
CAACAAATAGGTAGAGCTGA+GGG 0.656761 4_1:+56479347 Msa0557930:CDS
CTCATAGTAAGACTTCGTGT+GGG 0.656951 4_1:-56476347 None:intergenic
GGTTCGTTAGGATACTCCGG+AGG 0.659291 4_1:-56478963 None:intergenic
TCTATTACGAAAGCCACCCA+AGG 0.660166 4_1:+56479433 Msa0557930:CDS
TAGAACTCCACCTATTCTGG+AGG 0.661305 4_1:+56474829 Msa0557930:five_prime_UTR
TGGTGATATTATGTTCAAGG+CGG 0.662885 4_1:+56476772 Msa0557930:CDS
AAAAGGCTTCTACAAGCTTG+GGG 0.663581 4_1:-56479723 None:intergenic
CTTACTATGAGTATGACAAG+AGG 0.669246 4_1:+56476359 Msa0557930:CDS
ATGGGGTGTTGTCCAATGTG+TGG 0.669989 4_1:+56476613 Msa0557930:CDS
CCAACAAATAGGTAGAGCTG+AGG 0.673085 4_1:+56479346 Msa0557930:CDS
TTACTATGAGTATGACAAGA+GGG 0.674623 4_1:+56476360 Msa0557930:CDS
TATTTGAAGAGGGAAGAGGT+AGG 0.677144 4_1:-56473811 None:intergenic
GGGTAATGACATGAATGCGG+AGG 0.681615 4_1:+56476841 Msa0557930:CDS
CTAGTCGAGATAATCTTTCG+GGG 0.682837 4_1:+56475139 Msa0557930:five_prime_UTR
TTTCAAAGATGGTGATGTGG+AGG 0.685458 4_1:+56476949 Msa0557930:CDS
ACGCTTCTAAATCAGCAGGA+TGG 0.687059 4_1:+56476084 Msa0557930:CDS
GTCGGGTAATGACATGAATG+CGG 0.687237 4_1:+56476838 Msa0557930:CDS
CCTCAAGAGATGATTGAACG+CGG 0.691236 4_1:+56477319 Msa0557930:CDS
GTGTGAAAAGCACGACAACA+CGG 0.692670 4_1:-56476258 None:intergenic
AAGCCTGGCAGTAAAAGATG+GGG 0.699162 4_1:+56476596 Msa0557930:CDS
AAGGTGATTATGTAACTAAG+GGG 0.699693 4_1:+56475883 Msa0557930:CDS
GTTCGTTAGGATACTCCGGA+GGG 0.719877 4_1:-56478962 None:intergenic
TGCTCCGTGTCAGATCCAAG+TGG 0.720832 4_1:+56475747 Msa0557930:CDS
GCTTTGGAACCATTGCAAGG+AGG 0.722127 4_1:-56473726 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTGAAAATGAATT+TGG - chr4_1:56477549-56477568 None:intergenic 10.0%
!!! AAATTAATCTTTGAAAAAAA+CGG - chr4_1:56477606-56477625 None:intergenic 10.0%
!! TAATTTCATCTTTATTATTT+AGG - chr4_1:56478517-56478536 None:intergenic 10.0%
!! TTGAAAAATATAAACAAAAT+TGG + chr4_1:56478569-56478588 Msa0557930:intron 10.0%
!!! TGGTAATATTTTATAAGATA+AGG - chr4_1:56474794-56474813 None:intergenic 15.0%
!!! TTTTTTTGTCTATTTTTTCT+CGG - chr4_1:56474940-56474959 None:intergenic 15.0%
!!! TTCATTTTCAATTTTAAATG+AGG + chr4_1:56477551-56477570 Msa0557930:intron 15.0%
!!! TTTGATTTATAGGTAAAAAA+AGG + chr4_1:56478180-56478199 Msa0557930:intron 15.0%
!! AGAAATAAGTATATAAAACA+GGG - chr4_1:56478296-56478315 None:intergenic 15.0%
!! AAAAATATAAACAAAATTGG+TGG + chr4_1:56478572-56478591 Msa0557930:intron 15.0%
!! ATTTGATATACTAATGAAAA+TGG + chr4_1:56478751-56478770 Msa0557930:intron 15.0%
!! ATTCATATAAATTAGGATTT+AGG - chr4_1:56479175-56479194 None:intergenic 15.0%
!!! AAAATAAACCTTATTTTCAT+GGG - chr4_1:56479489-56479508 None:intergenic 15.0%
!! TCTAACATAATCATCTTATA+TGG - chr4_1:56474106-56474125 None:intergenic 20.0%
!!! AATCTTTTTCATGAAAATTG+TGG + chr4_1:56474324-56474343 Msa0557930:intron 20.0%
!!! TTAATTTGTTCTTTTGTTTC+AGG + chr4_1:56474442-56474461 Msa0557930:intron 20.0%
!! ATGAACATTAGAAGTAAATA+AGG - chr4_1:56475329-56475348 None:intergenic 20.0%
!! CATATCATCAATTTCAAATA+AGG + chr4_1:56475390-56475409 Msa0557930:intron 20.0%
!!! GAAGAAATTGATTTTCAATA+TGG + chr4_1:56475624-56475643 Msa0557930:CDS 20.0%
!! GGTATTAAAAAATGTAAACT+CGG + chr4_1:56475830-56475849 Msa0557930:CDS 20.0%
!!! ATTGGGGAATTTTTTATAAT+TGG + chr4_1:56476419-56476438 Msa0557930:CDS 20.0%
!!! TTGGGGAATTTTTTATAATT+GGG + chr4_1:56476420-56476439 Msa0557930:CDS 20.0%
!!! TTATAAACACACATGAATTT+TGG + chr4_1:56476528-56476547 Msa0557930:CDS 20.0%
!! ACTATATTTACAGAAAATCA+TGG - chr4_1:56477009-56477028 None:intergenic 20.0%
!! TAGAAAATAAGATACAACAT+TGG - chr4_1:56477167-56477186 None:intergenic 20.0%
!! TAGAGAAAATGTACTAATAT+AGG + chr4_1:56477518-56477537 Msa0557930:intron 20.0%
!! ATTTATAGGTAAAAAAAGGT+TGG + chr4_1:56478184-56478203 Msa0557930:intron 20.0%
!! TTTATAGGTAAAAAAAGGTT+GGG + chr4_1:56478185-56478204 Msa0557930:intron 20.0%
!! GAGAAATAAGTATATAAAAC+AGG - chr4_1:56478297-56478316 None:intergenic 20.0%
!!! AATGGATTTCCTTTTTAAAA+TGG - chr4_1:56478421-56478440 None:intergenic 20.0%
!! TTTCCAGATAAAATCTTAAA+TGG - chr4_1:56478699-56478718 None:intergenic 20.0%
!! ATATCAAATAATTAACGCTT+AGG - chr4_1:56478740-56478759 None:intergenic 20.0%
!! AATCCTAATTTATATGAATC+AGG + chr4_1:56479176-56479195 Msa0557930:CDS 20.0%
!! ATCCTAATTTATATGAATCA+GGG + chr4_1:56479177-56479196 Msa0557930:CDS 20.0%
!! TAATAGATACAACATAGATT+TGG - chr4_1:56479420-56479439 None:intergenic 20.0%
!!! CAAAATAAACCTTATTTTCA+TGG - chr4_1:56479490-56479509 None:intergenic 20.0%
! CTTACACTTACTCATAAATA+GGG - chr4_1:56473648-56473667 None:intergenic 25.0%
! TCTTACACTTACTCATAAAT+AGG - chr4_1:56473649-56473668 None:intergenic 25.0%
! TATGAGTAAGTGTAAGAAAA+AGG + chr4_1:56473652-56473671 Msa0557930:five_prime_UTR 25.0%
! TAAGGGTAAATATTTGAAGA+GGG - chr4_1:56473824-56473843 None:intergenic 25.0%
! TTAAGGGTAAATATTTGAAG+AGG - chr4_1:56473825-56473844 None:intergenic 25.0%
! ATTTACCCTTAACAAATTCT+TGG + chr4_1:56473833-56473852 Msa0557930:five_prime_UTR 25.0%
!!! AACTACCAAGAATTTGTTAA+GGG - chr4_1:56473841-56473860 None:intergenic 25.0%
!!! AAACTACCAAGAATTTGTTA+AGG - chr4_1:56473842-56473861 None:intergenic 25.0%
!! TATGATATACACCTTTGAAA+TGG - chr4_1:56473945-56473964 None:intergenic 25.0%
!! TTTCAAAGGTGTATATCATA+TGG + chr4_1:56473945-56473964 Msa0557930:intron 25.0%
! ATTCTTTCTAATGCTATGTA+TGG + chr4_1:56474041-56474060 Msa0557930:intron 25.0%
! TAAGATGATTATGTTAGAAG+AGG + chr4_1:56474108-56474127 Msa0557930:intron 25.0%
!! CTTTAGATTTTATTCAACCT+TGG - chr4_1:56474150-56474169 None:intergenic 25.0%
! CAAGGTTGAATAAAATCTAA+AGG + chr4_1:56474148-56474167 Msa0557930:intron 25.0%
!!! AAAATCTAAAGGCATGTTTT+TGG + chr4_1:56474159-56474178 Msa0557930:intron 25.0%
!!! AAATCTAAAGGCATGTTTTT+GGG + chr4_1:56474160-56474179 Msa0557930:intron 25.0%
! TTGATATATGAAAAAGGACA+GGG - chr4_1:56474275-56474294 None:intergenic 25.0%
!!! TCCTTTTTCATATATCAACT+AGG + chr4_1:56474277-56474296 Msa0557930:intron 25.0%
!!! CCTTTTTCATATATCAACTA+GGG + chr4_1:56474278-56474297 Msa0557930:intron 25.0%
!! CAGAATATATTTCTGTTGAA+TGG + chr4_1:56474524-56474543 Msa0557930:five_prime_UTR 25.0%
! AGAATGGTCAATATTTAATC+AGG - chr4_1:56474559-56474578 None:intergenic 25.0%
! AATTCTCTATCAGGTTTATT+TGG - chr4_1:56474591-56474610 None:intergenic 25.0%
!! TAAACCTGATAGAGAATTTT+AGG + chr4_1:56474593-56474612 Msa0557930:five_prime_UTR 25.0%
! TGAAATATTTCATTCGCAAT+TGG + chr4_1:56475020-56475039 Msa0557930:five_prime_UTR 25.0%
! GAAATATTTCATTCGCAATT+GGG + chr4_1:56475021-56475040 Msa0557930:five_prime_UTR 25.0%
!! TGATATGCATAGTTTAGAAT+GGG - chr4_1:56475377-56475396 None:intergenic 25.0%
! ATGATATGCATAGTTTAGAA+TGG - chr4_1:56475378-56475397 None:intergenic 25.0%
! TAGTATCAAAATATTGTGAC+AGG + chr4_1:56475525-56475544 Msa0557930:intron 25.0%
!!! GAAATTGATTTTCAATATGG+TGG + chr4_1:56475627-56475646 Msa0557930:CDS 25.0%
!! TAAAACCTTTTCTCTTTCTA+AGG - chr4_1:56475988-56476007 None:intergenic 25.0%
! CATAATATCACCAAAAAAAC+AGG - chr4_1:56476765-56476784 None:intergenic 25.0%
!!! TTTTGGTGATATTATGTTCA+AGG + chr4_1:56476769-56476788 Msa0557930:CDS 25.0%
! TGATAAAGATACAGAAAAGT+CGG + chr4_1:56476820-56476839 Msa0557930:CDS 25.0%
!! AGTCATCTTGATAATTCATT+TGG - chr4_1:56476886-56476905 None:intergenic 25.0%
! GTAACATAATATTAGAACCA+TGG + chr4_1:56477084-56477103 Msa0557930:intron 25.0%
!!! TGATATTTGTTTTTCCAAAC+AGG + chr4_1:56477237-56477256 Msa0557930:intron 25.0%
! TCAATCCGAAAAATTTCATA+AGG - chr4_1:56477268-56477287 None:intergenic 25.0%
!! TCTTTGAAAAAAACGGATTT+AGG - chr4_1:56477599-56477618 None:intergenic 25.0%
! CATCACATTCAGTTTATATT+GGG - chr4_1:56477651-56477670 None:intergenic 25.0%
! ACATCACATTCAGTTTATAT+TGG - chr4_1:56477652-56477671 None:intergenic 25.0%
! TCGTTATCCATTTCAAATTT+AGG - chr4_1:56477848-56477867 None:intergenic 25.0%
! TTATCCTGATAAGAAAGATT+TGG + chr4_1:56477874-56477893 Msa0557930:CDS 25.0%
! TGTTATAGAAAATTGTTCTG+AGG + chr4_1:56478051-56478070 Msa0557930:CDS 25.0%
! TACTACGTTGATATATTAGT+AGG + chr4_1:56478145-56478164 Msa0557930:intron 25.0%
! TTGATATATTAGTAGGCTAA+CGG + chr4_1:56478152-56478171 Msa0557930:intron 25.0%
!!! AACGGTTTTCTTTGATTTAT+AGG + chr4_1:56478170-56478189 Msa0557930:intron 25.0%
! ATATACATTCTCACTCAAAA+TGG - chr4_1:56478439-56478458 None:intergenic 25.0%
!!! ATTTTGAGTGAGAATGTATA+TGG + chr4_1:56478438-56478457 Msa0557930:intron 25.0%
!!! TAGAAACCAGAATTTGATTT+TGG + chr4_1:56478535-56478554 Msa0557930:intron 25.0%
!!! AGAAACCAGAATTTGATTTT+GGG + chr4_1:56478536-56478555 Msa0557930:intron 25.0%
!!! AATTTGATTTTGGGGATATT+AGG + chr4_1:56478545-56478564 Msa0557930:intron 25.0%
! AACATAAATAGAGTCTGTTT+GGG - chr4_1:56478844-56478863 None:intergenic 25.0%
! CATATAAATTAGGATTTAGG+CGG - chr4_1:56479172-56479191 None:intergenic 25.0%
! TTCCCTGATTCATATAAATT+AGG - chr4_1:56479182-56479201 None:intergenic 25.0%
!!! ACACTCTTTTTGAAATGCTA+AGG - chr4_1:56473704-56473723 None:intergenic 30.0%
TAAATATTTGAAGAGGGAAG+AGG - chr4_1:56473818-56473837 None:intergenic 30.0%
! AGCAAATAATGGAGTTTCTT+TGG + chr4_1:56473888-56473907 Msa0557930:five_prime_UTR 30.0%
!! ATATACACCTTTGAAATGGT+TGG - chr4_1:56473941-56473960 None:intergenic 30.0%
AGAAAACGATAAATTTGCAG+TGG - chr4_1:56473986-56474005 None:intergenic 30.0%
TTCTAATGCTATGTATGGTT+TGG + chr4_1:56474046-56474065 Msa0557930:intron 30.0%
GTGATTTCATAAGAATTCCA+AGG + chr4_1:56474130-56474149 Msa0557930:intron 30.0%
!! CACAACTTTGTTGCTTTAAT+TGG - chr4_1:56474195-56474214 None:intergenic 30.0%
GTTGATATATGAAAAAGGAC+AGG - chr4_1:56474276-56474295 None:intergenic 30.0%
! CCCTAGTTGATATATGAAAA+AGG - chr4_1:56474281-56474300 None:intergenic 30.0%
CATCATTGTGAAGAACTAAT+AGG - chr4_1:56474359-56474378 None:intergenic 30.0%
AAATATTGACCATTCTCTCT+TGG + chr4_1:56474563-56474582 Msa0557930:five_prime_UTR 30.0%
AAAGCCTAAAATTCTCTATC+AGG - chr4_1:56474600-56474619 None:intergenic 30.0%
AACATACATGAATAGCAGAA+AGG - chr4_1:56474673-56474692 None:intergenic 30.0%
AAAAGTTACTGAACTTCCTT+TGG + chr4_1:56474729-56474748 Msa0557930:five_prime_UTR 30.0%
GAGCATATTATCAAGTTTAG+AGG + chr4_1:56475659-56475678 Msa0557930:CDS 30.0%
! TTTGAGAGAACTTTTGTTCA+TGG + chr4_1:56475714-56475733 Msa0557930:CDS 30.0%
CTTGGAAAATGTTAAAGGAA+AGG + chr4_1:56475809-56475828 Msa0557930:CDS 30.0%
! TACATAATCACCTTCTGAAA+TGG - chr4_1:56475877-56475896 None:intergenic 30.0%
AGAAGGTGATTATGTAACTA+AGG + chr4_1:56475881-56475900 Msa0557930:CDS 30.0%
GAAGGTGATTATGTAACTAA+GGG + chr4_1:56475882-56475901 Msa0557930:CDS 30.0%
AAGGTGATTATGTAACTAAG+GGG + chr4_1:56475883-56475902 Msa0557930:CDS 30.0%
!! TCTTTCTAAGGCAATGATAT+CGG - chr4_1:56475976-56475995 None:intergenic 30.0%
TTACTATGAGTATGACAAGA+GGG + chr4_1:56476360-56476379 Msa0557930:CDS 30.0%
AACCTTGTTAACTCTTGTAT+TGG + chr4_1:56476401-56476420 Msa0557930:CDS 30.0%
ACCTTGTTAACTCTTGTATT+GGG + chr4_1:56476402-56476421 Msa0557930:CDS 30.0%
CAAAATGGTGAACATAGTTT+GGG + chr4_1:56476473-56476492 Msa0557930:CDS 30.0%
GTGTGTTTATAACATTCACT+GGG - chr4_1:56476520-56476539 None:intergenic 30.0%
TGTGTGTTTATAACATTCAC+TGG - chr4_1:56476521-56476540 None:intergenic 30.0%
CAAAAAAACAGGAGTAATCT+GGG - chr4_1:56476754-56476773 None:intergenic 30.0%
TTTCTGTATCTTTATCAGCT+TGG - chr4_1:56476817-56476836 None:intergenic 30.0%
GATAAAGATACAGAAAAGTC+GGG + chr4_1:56476821-56476840 Msa0557930:CDS 30.0%
!! ACTGTTATTGGTTTCAAAGA+TGG + chr4_1:56476938-56476957 Msa0557930:CDS 30.0%
ATCCATACTTTGACTATATG+TGG - chr4_1:56477052-56477071 None:intergenic 30.0%
TAGTCAAAGTATGGATTTGA+TGG + chr4_1:56477056-56477075 Msa0557930:intron 30.0%
! AAGTATGGATTTGATGGTAA+TGG + chr4_1:56477062-56477081 Msa0557930:intron 30.0%
! TTCCGCCTTATGAAATTTTT+CGG + chr4_1:56477260-56477279 Msa0557930:CDS 30.0%
ATCCGAAAAATTTCATAAGG+CGG - chr4_1:56477265-56477284 None:intergenic 30.0%
GGAAACTATAATCAAAAGAC+AGG + chr4_1:56477485-56477504 Msa0557930:intron 30.0%
GAATGTGATGTTTAATGTTC+AGG + chr4_1:56477661-56477680 Msa0557930:intron 30.0%
TGATGGTAGAAAAGAGAATT+TGG + chr4_1:56477697-56477716 Msa0557930:CDS 30.0%
AATACGGGAAAAAAGTTCAA+AGG - chr4_1:56477765-56477784 None:intergenic 30.0%
GAATATGCTGGATTTAATAC+GGG - chr4_1:56477780-56477799 None:intergenic 30.0%
GGAATATGCTGGATTTAATA+CGG - chr4_1:56477781-56477800 None:intergenic 30.0%
GTTTCCAAATCTTTCTTATC+AGG - chr4_1:56477881-56477900 None:intergenic 30.0%
CTTCATATCCAGAAGTTATT+AGG + chr4_1:56477960-56477979 Msa0557930:CDS 30.0%
TAACATCAAACTGCTTAAAC+TGG - chr4_1:56478036-56478055 None:intergenic 30.0%
! CTTTTCCCTCATCAAAAAAA+TGG - chr4_1:56478081-56478100 None:intergenic 30.0%
AAAAGAATTGTCAACATTGC+AGG + chr4_1:56478096-56478115 Msa0557930:CDS 30.0%
AAAAAAAGGTTGGGTGAAAA+AGG + chr4_1:56478194-56478213 Msa0557930:CDS 30.0%
TGAAAAAGGTTCAACAAGAA+TGG + chr4_1:56478208-56478227 Msa0557930:CDS 30.0%
AGAAAGATAAAGTATGTACC+CGG - chr4_1:56478255-56478274 None:intergenic 30.0%
ATGATGCTTAAACTCGAATT+AGG + chr4_1:56478353-56478372 Msa0557930:intron 30.0%
!! GTCTCTTAGCCATTTTAAAA+AGG + chr4_1:56478409-56478428 Msa0557930:intron 30.0%
!! GAAACCAGAATTTGATTTTG+GGG + chr4_1:56478537-56478556 Msa0557930:intron 30.0%
ATATCCCCAAAATCAAATTC+TGG - chr4_1:56478544-56478563 None:intergenic 30.0%
! TAAACAAAATTGGTGGTAGT+TGG + chr4_1:56478579-56478598 Msa0557930:intron 30.0%
ATAAAATCTTAAATGGCCCT+CGG - chr4_1:56478692-56478711 None:intergenic 30.0%
GAACATAAATAGAGTCTGTT+TGG - chr4_1:56478845-56478864 None:intergenic 30.0%
TCTTGTGTTTGAAGAAAGAA+TGG + chr4_1:56478863-56478882 Msa0557930:intron 30.0%
AACTACACTTAAAAGCTTAC+AGG - chr4_1:56478990-56479009 None:intergenic 30.0%
TAAAGTAAGGCTTCTCATTA+AGG - chr4_1:56479310-56479329 None:intergenic 30.0%
! AGATGTGGTAATTTTACCTT+GGG - chr4_1:56479452-56479471 None:intergenic 30.0%
! TAGATGTGGTAATTTTACCT+TGG - chr4_1:56479453-56479472 None:intergenic 30.0%
!!! ATAAACCTTATTTTCATGGG+AGG - chr4_1:56479486-56479505 None:intergenic 30.0%
! ACAAGCCAAAAGTATATGTT+TGG - chr4_1:56479602-56479621 None:intergenic 30.0%
TTGAAGCTGACAGCAAATAA+TGG + chr4_1:56473877-56473896 Msa0557930:five_prime_UTR 35.0%
! ATACCTTTACTAGCTTATGC+TGG + chr4_1:56473914-56473933 Msa0557930:five_prime_UTR 35.0%
ACGATAAATTTGCAGTGGAA+GGG - chr4_1:56473981-56474000 None:intergenic 35.0%
AACGATAAATTTGCAGTGGA+AGG - chr4_1:56473982-56474001 None:intergenic 35.0%
!! TTCTAGAAACCAGCTTTGTT+GGG - chr4_1:56474383-56474402 None:intergenic 35.0%
! ATTCTAGAAACCAGCTTTGT+TGG - chr4_1:56474384-56474403 None:intergenic 35.0%
CAGGTTCAATAGAAATGATG+TGG + chr4_1:56474461-56474480 Msa0557930:intron 35.0%
TATTTGGTACCAAGAGAGAA+TGG - chr4_1:56474575-56474594 None:intergenic 35.0%
!! GAATTTTAGGCTTTGTAGTG+CGG + chr4_1:56474606-56474625 Msa0557930:five_prime_UTR 35.0%
!! AATTTTAGGCTTTGTAGTGC+GGG + chr4_1:56474607-56474626 Msa0557930:five_prime_UTR 35.0%
CAAATTTCCTTTGGCAATCT+CGG + chr4_1:56474630-56474649 Msa0557930:five_prime_UTR 35.0%
! AGTTCAGTAACTTTTGCCAA+AGG - chr4_1:56474724-56474743 None:intergenic 35.0%
! TTCTAAGAGTGACTTCTGAA+TGG - chr4_1:56474814-56474833 None:intergenic 35.0%
AGATAGTTACAAGATGCCAA+AGG - chr4_1:56474862-56474881 None:intergenic 35.0%
!!! TATTTTTTCTCGGTTTCGCA+GGG - chr4_1:56474930-56474949 None:intergenic 35.0%
AGGATAATAGGAACCAATCA+AGG - chr4_1:56475072-56475091 None:intergenic 35.0%
! TTGATTGGTTCCTATTATCC+TGG + chr4_1:56475071-56475090 Msa0557930:five_prime_UTR 35.0%
GTCTAGTCGAGATAATCTTT+CGG + chr4_1:56475137-56475156 Msa0557930:five_prime_UTR 35.0%
TCTAGTCGAGATAATCTTTC+GGG + chr4_1:56475138-56475157 Msa0557930:five_prime_UTR 35.0%
TATGCTGATGATAGCTTCAA+TGG - chr4_1:56475235-56475254 None:intergenic 35.0%
! ATGCTTCAATTTGCTTGAGA+AGG + chr4_1:56475286-56475305 Msa0557930:five_prime_UTR 35.0%
TGTGACAGGCATATAATTGA+TGG + chr4_1:56475539-56475558 Msa0557930:intron 35.0%
! TATGAGTAGTGATTCGGAAT+GGG + chr4_1:56475566-56475585 Msa0557930:CDS 35.0%
! TCAAGTTTAGAGGAAAGCAT+TGG + chr4_1:56475669-56475688 Msa0557930:CDS 35.0%
!! CAAGTTTAGAGGAAAGCATT+GGG + chr4_1:56475670-56475689 Msa0557930:CDS 35.0%
!! AACTTTTGTTCATGGTGATG+TGG + chr4_1:56475722-56475741 Msa0557930:CDS 35.0%
!! GACAAGTGTTGATTTGTTTG+TGG + chr4_1:56475785-56475804 Msa0557930:CDS 35.0%
!! TGTTGATTTGTTTGTGGACT+TGG + chr4_1:56475791-56475810 Msa0557930:CDS 35.0%
GTGGACTTGGAAAATGTTAA+AGG + chr4_1:56475804-56475823 Msa0557930:CDS 35.0%
GTTACTGTATTGTTTGACGA+TGG + chr4_1:56475942-56475961 Msa0557930:CDS 35.0%
CATTGCCTTAGAAAGAGAAA+AGG + chr4_1:56475980-56475999 Msa0557930:CDS 35.0%
TCTGGAAATTTACGAGTCAA+TGG - chr4_1:56476011-56476030 None:intergenic 35.0%
CTTACTATGAGTATGACAAG+AGG + chr4_1:56476359-56476378 Msa0557930:CDS 35.0%
CCTTGTTAACTCTTGTATTG+GGG + chr4_1:56476403-56476422 Msa0557930:CDS 35.0%
! AGACCAAAGTTGACATTTTG+TGG + chr4_1:56476450-56476469 Msa0557930:CDS 35.0%
TTGCCACAAAATGTCAACTT+TGG - chr4_1:56476456-56476475 None:intergenic 35.0%
! GTTGACATTTTGTGGCAAAA+TGG + chr4_1:56476458-56476477 Msa0557930:CDS 35.0%
GCAAAATGGTGAACATAGTT+TGG + chr4_1:56476472-56476491 Msa0557930:CDS 35.0%
! TTTTCCAGTACAAACTGATG+AGG - chr4_1:56476554-56476573 None:intergenic 35.0%
CATCAGTTTGTACTGGAAAA+AGG + chr4_1:56476554-56476573 Msa0557930:CDS 35.0%
! AGCATACTGTAAAGGTACAA+TGG + chr4_1:56476645-56476664 Msa0557930:CDS 35.0%
CCAAAAAAACAGGAGTAATC+TGG - chr4_1:56476755-56476774 None:intergenic 35.0%
!!! CCAGATTACTCCTGTTTTTT+TGG + chr4_1:56476752-56476771 Msa0557930:CDS 35.0%
TGGTGATATTATGTTCAAGG+CGG + chr4_1:56476772-56476791 Msa0557930:CDS 35.0%
GTCCACATATAGTCAAAGTA+TGG + chr4_1:56477047-56477066 Msa0557930:intron 35.0%
TTGAATGATCCTACTGAACT+TGG + chr4_1:56477135-56477154 Msa0557930:intron 35.0%
TTTCGGATTGATAAACACGA+AGG + chr4_1:56477277-56477296 Msa0557930:CDS 35.0%
AAGTCTACCTTCTGATAAGA+AGG + chr4_1:56477342-56477361 Msa0557930:CDS 35.0%
AGTCTACCTTCTGATAAGAA+GGG + chr4_1:56477343-56477362 Msa0557930:CDS 35.0%
!! AATGTTCAGGACTTGTTAAG+TGG + chr4_1:56477674-56477693 Msa0557930:intron 35.0%
! CATTTCAAATTTAGGCACTG+AGG - chr4_1:56477840-56477859 None:intergenic 35.0%
CTCAGTGCCTAAATTTGAAA+TGG + chr4_1:56477838-56477857 Msa0557930:CDS 35.0%
TCATGGATCCTAATAACTTC+TGG - chr4_1:56477971-56477990 None:intergenic 35.0%
!! CTGTTGCTTTCTAAAGAAAG+CGG - chr4_1:56478007-56478026 None:intergenic 35.0%
!!! GACCACCATTTTTTTGATGA+GGG + chr4_1:56478073-56478092 Msa0557930:CDS 35.0%
TTCCCTCATCAAAAAAATGG+TGG - chr4_1:56478078-56478097 None:intergenic 35.0%
AACGTAGTATGTCACACTAT+AGG - chr4_1:56478134-56478153 None:intergenic 35.0%
TGAGAATGTATATGGCAAGA+TGG + chr4_1:56478446-56478465 Msa0557930:intron 35.0%
TATTATTTAGGCTTGTGCTG+TGG - chr4_1:56478505-56478524 None:intergenic 35.0%
GTGGTAGTTGGAAATAGAAA+TGG + chr4_1:56478591-56478610 Msa0557930:intron 35.0%
ATGTATTCATGTTTGTACCG+AGG + chr4_1:56478672-56478691 Msa0557930:intron 35.0%
TGTATTCATGTTTGTACCGA+GGG + chr4_1:56478673-56478692 Msa0557930:intron 35.0%
!! GGGCCATTTAAGATTTTATC+TGG + chr4_1:56478693-56478712 Msa0557930:intron 35.0%
CTTTGATATATGTTTCCCTC+CGG + chr4_1:56478947-56478966 Msa0557930:CDS 35.0%
TACACTTAAAAGCTTACAGG+TGG - chr4_1:56478987-56479006 None:intergenic 35.0%
TTCCAGCACCATTGTTTATA+AGG + chr4_1:56479034-56479053 Msa0557930:intron 35.0%
GATCTTTGAACATAAGCGAA+GGG - chr4_1:56479060-56479079 None:intergenic 35.0%
TGATCTTTGAACATAAGCGA+AGG - chr4_1:56479061-56479080 None:intergenic 35.0%
AAGAACTTGAAGAATAGTGG+AGG - chr4_1:56479267-56479286 None:intergenic 35.0%
GAGAAGAACTTGAAGAATAG+TGG - chr4_1:56479270-56479289 None:intergenic 35.0%
TGAGAAGCCTTACTTTAATG+AGG + chr4_1:56479313-56479332 Msa0557930:CDS 35.0%
TAACCAGCCTCATTAAAGTA+AGG - chr4_1:56479323-56479342 None:intergenic 35.0%
GAGGAACTAAAGTATAGATG+TGG - chr4_1:56479467-56479486 None:intergenic 35.0%
TAGTTCCTCCCATGAAAATA+AGG + chr4_1:56479478-56479497 Msa0557930:intron 35.0%
GCTTGTAAAGCATATCTTGA+AGG + chr4_1:56479616-56479635 Msa0557930:CDS 35.0%
! TTCAGTTTTTCCACATCCAA+TGG - chr4_1:56479647-56479666 None:intergenic 35.0%
AACTGAACATGAAAACCAGA+AGG + chr4_1:56479660-56479679 Msa0557930:CDS 35.0%
ACTGAACATGAAAACCAGAA+GGG + chr4_1:56479661-56479680 Msa0557930:CDS 35.0%
ATCAATTCCCTTGTCACAAA+AGG - chr4_1:56479743-56479762 None:intergenic 35.0%
!! GAGGTAGGTGTTGTTCAAAT+AGG - chr4_1:56473799-56473818 None:intergenic 40.0%
TATTTGAAGAGGGAAGAGGT+AGG - chr4_1:56473814-56473833 None:intergenic 40.0%
! GGTTTGGTACTTGATAGTTG+TGG + chr4_1:56474062-56474081 Msa0557930:intron 40.0%
TGAAAAAGGACAGGGAAACA+AGG - chr4_1:56474267-56474286 None:intergenic 40.0%
CATATATCAACTAGGGACTG+TGG + chr4_1:56474285-56474304 Msa0557930:intron 40.0%
TTCACAGCAAGTAGGCAAAA+GGG - chr4_1:56474496-56474515 None:intergenic 40.0%
ATTCACAGCAAGTAGGCAAA+AGG - chr4_1:56474497-56474516 None:intergenic 40.0%
CTTCTTGATTCACAGCAAGT+AGG - chr4_1:56474504-56474523 None:intergenic 40.0%
! TTCTTTTCCGAGATTGCCAA+AGG - chr4_1:56474640-56474659 None:intergenic 40.0%
GTTTGAAGATTCCTGTGTAC+TGG + chr4_1:56474690-56474709 Msa0557930:five_prime_UTR 40.0%
TGTACTGGACAAATCTCCTT+TGG + chr4_1:56474705-56474724 Msa0557930:five_prime_UTR 40.0%
GTTACTGAACTTCCTTTGGT+TGG + chr4_1:56474733-56474752 Msa0557930:five_prime_UTR 40.0%
AACTTCCTTTGGTTGGATTC+AGG + chr4_1:56474740-56474759 Msa0557930:five_prime_UTR 40.0%
TACTACCTGAATCCAACCAA+AGG - chr4_1:56474748-56474767 None:intergenic 40.0%
TCTTAGAACTCCACCTATTC+TGG + chr4_1:56474826-56474845 Msa0557930:five_prime_UTR 40.0%
!!! CTATTTTTTCTCGGTTTCGC+AGG - chr4_1:56474931-56474950 None:intergenic 40.0%
! ATTGGTTCCTATTATCCTGG+CGG + chr4_1:56475074-56475093 Msa0557930:five_prime_UTR 40.0%
CTAGTCGAGATAATCTTTCG+GGG + chr4_1:56475139-56475158 Msa0557930:five_prime_UTR 40.0%
TAGCTCTCATTCACTGTACT+TGG + chr4_1:56475445-56475464 Msa0557930:intron 40.0%
TTTCCTCTCTATTGTTGCGT+CGG + chr4_1:56475473-56475492 Msa0557930:intron 40.0%
GGATGCTATGAGTAGTGATT+CGG + chr4_1:56475560-56475579 Msa0557930:CDS 40.0%
! CTATGAGTAGTGATTCGGAA+TGG + chr4_1:56475565-56475584 Msa0557930:CDS 40.0%
CGGACAAACTTTCGAAGATT+CGG + chr4_1:56475850-56475869 Msa0557930:CDS 40.0%
! AAGATTCGGTCCATTTCAGA+AGG + chr4_1:56475864-56475883 Msa0557930:CDS 40.0%
ATTATGTAACTAAGGGGCCA+TGG + chr4_1:56475889-56475908 Msa0557930:CDS 40.0%
!! TGCTGATTTAGAAGCGTTGT+AGG - chr4_1:56476081-56476100 None:intergenic 40.0%
TACAACGCTTCTAAATCAGC+AGG + chr4_1:56476080-56476099 Msa0557930:CDS 40.0%
TGGAGAGACAATCAAGATGA+AGG + chr4_1:56476119-56476138 Msa0557930:CDS 40.0%
!! CAAGTTTGGTGTGTGTTAAC+TGG + chr4_1:56476162-56476181 Msa0557930:CDS 40.0%
TTCGGATAGCAATTTGACTG+TGG + chr4_1:56476199-56476218 Msa0557930:CDS 40.0%
!!! TTTTTGGAATCTTGCCAGCA+TGG - chr4_1:56476233-56476252 None:intergenic 40.0%
CTCATAGTAAGACTTCGTGT+GGG - chr4_1:56476350-56476369 None:intergenic 40.0%
ACTCATAGTAAGACTTCGTG+TGG - chr4_1:56476351-56476370 None:intergenic 40.0%
CCCCAATACAAGAGTTAACA+AGG - chr4_1:56476406-56476425 None:intergenic 40.0%
TTAAGCCTGGCAGTAAAAGA+TGG + chr4_1:56476594-56476613 Msa0557930:CDS 40.0%
TAAGCCTGGCAGTAAAAGAT+GGG + chr4_1:56476595-56476614 Msa0557930:CDS 40.0%
!! CAAACTATTCGGTTTGGACA+TGG - chr4_1:56476681-56476700 None:intergenic 40.0%
CATGTCCAAACCGAATAGTT+TGG + chr4_1:56476679-56476698 Msa0557930:CDS 40.0%
TCCAAACCGAATAGTTTGGA+TGG + chr4_1:56476683-56476702 Msa0557930:CDS 40.0%
TCCATCCAAACTATTCGGTT+TGG - chr4_1:56476687-56476706 None:intergenic 40.0%
TCGTCTCCATCCAAACTATT+CGG - chr4_1:56476692-56476711 None:intergenic 40.0%
TAGTTTGGATGGAGACGAAA+TGG + chr4_1:56476694-56476713 Msa0557930:CDS 40.0%
! TGGTTTCAAAGATGGTGATG+TGG + chr4_1:56476946-56476965 Msa0557930:CDS 40.0%
! TTTCAAAGATGGTGATGTGG+AGG + chr4_1:56476949-56476968 Msa0557930:CDS 40.0%
CAGAAAATCATGGCATACCT+TGG - chr4_1:56476999-56477018 None:intergenic 40.0%
AATACGCAATGCAAGTTCCA+TGG - chr4_1:56477104-56477123 None:intergenic 40.0%
ACCTTCTGATAAGAAGGGAA+AGG + chr4_1:56477348-56477367 Msa0557930:CDS 40.0%
ACCTTTCCCTTCTTATCAGA+AGG - chr4_1:56477352-56477371 None:intergenic 40.0%
CAGACATAGAAATCTCAGCT+TGG + chr4_1:56477464-56477483 Msa0557930:intron 40.0%
TCCAGCATATTCCAAACACT+TGG + chr4_1:56477788-56477807 Msa0557930:CDS 40.0%
! ACCAAGTGTTTGGAATATGC+TGG - chr4_1:56477792-56477811 None:intergenic 40.0%
AGCATATTCCAAACACTTGG+TGG + chr4_1:56477791-56477810 Msa0557930:CDS 40.0%
TGAGGAAAATGCTCCTGAAA+TGG - chr4_1:56477822-56477841 None:intergenic 40.0%
GCGGAAAATCATTCTTGTCA+TGG - chr4_1:56477988-56478007 None:intergenic 40.0%
!!! GGACCACCATTTTTTTGATG+AGG + chr4_1:56478072-56478091 Msa0557930:CDS 40.0%
CAATAACGACTGCTACAGAA+AGG - chr4_1:56478329-56478348 None:intergenic 40.0%
ATGTATATGGCAAGATGGCA+TGG + chr4_1:56478451-56478470 Msa0557930:intron 40.0%
AAGAACAACCCGTCATGATA+CGG - chr4_1:56478927-56478946 None:intergenic 40.0%
ACATCACGTTGACAACATCA+GGG - chr4_1:56479113-56479132 None:intergenic 40.0%
AACATCACGTTGACAACATC+AGG - chr4_1:56479114-56479133 None:intergenic 40.0%
ACGTGATGTTTGAATGCAGA+TGG + chr4_1:56479124-56479143 Msa0557930:intron 40.0%
GTCTGAGTCTCCTAAATACT+TGG + chr4_1:56479207-56479226 Msa0557930:CDS 40.0%
AGTCTCCTAAATACTTGGAC+AGG + chr4_1:56479212-56479231 Msa0557930:CDS 40.0%
TCAAGTTCTTCTCTCTCTAC+AGG + chr4_1:56479277-56479296 Msa0557930:CDS 40.0%
AAGCCTTACTTTAATGAGGC+TGG + chr4_1:56479317-56479336 Msa0557930:CDS 40.0%
GCTGGTTATGACCAACAAAT+AGG + chr4_1:56479335-56479354 Msa0557930:CDS 40.0%
CAACAAATAGGTAGAGCTGA+GGG + chr4_1:56479347-56479366 Msa0557930:CDS 40.0%
ACATAGATTTGGCTGTGACA+AGG - chr4_1:56479409-56479428 None:intergenic 40.0%
! TGTGGTAATTTTACCTTGGG+TGG - chr4_1:56479449-56479468 None:intergenic 40.0%
! ATGTCTGATGCAGCATTTTG+AGG + chr4_1:56479546-56479565 Msa0557930:intron 40.0%
! GCGCTCCAAACATATACTTT+TGG + chr4_1:56479594-56479613 Msa0557930:CDS 40.0%
CTGAACATGAAAACCAGAAG+GGG + chr4_1:56479662-56479681 Msa0557930:CDS 40.0%
AAAAGGCTTCTACAAGCTTG+GGG - chr4_1:56479726-56479745 None:intergenic 40.0%
CAAAAGGCTTCTACAAGCTT+GGG - chr4_1:56479727-56479746 None:intergenic 40.0%
ACAAAAGGCTTCTACAAGCT+TGG - chr4_1:56479728-56479747 None:intergenic 40.0%
! TGTAGAAGCCTTTTGTGACA+AGG + chr4_1:56479732-56479751 Msa0557930:CDS 40.0%
! GTAGAAGCCTTTTGTGACAA+GGG + chr4_1:56479733-56479752 Msa0557930:CDS 40.0%
TTGCAACTCAACAAACTGAC+TGG - chr4_1:56479767-56479786 None:intergenic 40.0%
!! CAAGCTTTGGAACCATTGCA+AGG - chr4_1:56473732-56473751 None:intergenic 45.0%
CTTGCAATGGTTCCAAAGCT+TGG + chr4_1:56473730-56473749 Msa0557930:five_prime_UTR 45.0%
!! GAAGATGGTGGAACTGGAAT+TGG + chr4_1:56473766-56473785 Msa0557930:five_prime_UTR 45.0%
GGACCAGCATAAGCTAGTAA+AGG - chr4_1:56473920-56473939 None:intergenic 45.0%
TGCTGGTCCAACCATTTCAA+AGG + chr4_1:56473931-56473950 Msa0557930:five_prime_UTR 45.0%
CAATGATGTCCCAACAAAGC+TGG + chr4_1:56474371-56474390 Msa0557930:intron 45.0%
TAGTGCGGGCAAATTTCCTT+TGG + chr4_1:56474621-56474640 Msa0557930:five_prime_UTR 45.0%
AGGAGATTTGTCCAGTACAC+AGG - chr4_1:56474704-56474723 None:intergenic 45.0%
TAGAACTCCACCTATTCTGG+AGG + chr4_1:56474829-56474848 Msa0557930:five_prime_UTR 45.0%
AGATTTGCCTCCAGAATAGG+TGG - chr4_1:56474839-56474858 None:intergenic 45.0%
AGGAGATTTGCCTCCAGAAT+AGG - chr4_1:56474842-56474861 None:intergenic 45.0%
! TTCTGGAGGCAAATCTCCTT+TGG + chr4_1:56474843-56474862 Msa0557930:five_prime_UTR 45.0%
GCAATTGGGCATATCTCCTT+TGG + chr4_1:56475035-56475054 Msa0557930:five_prime_UTR 45.0%
GCATATCTCCTTTGGCACTT+TGG + chr4_1:56475043-56475062 Msa0557930:five_prime_UTR 45.0%
TTGGTTCCTATTATCCTGGC+GGG + chr4_1:56475075-56475094 Msa0557930:five_prime_UTR 45.0%
CTTCTTTGGCATCAGATCTC+TGG + chr4_1:56475103-56475122 Msa0557930:five_prime_UTR 45.0%
TCAGATCCAAGTGGACAGAT+GGG + chr4_1:56475756-56475775 Msa0557930:CDS 45.0%
TATGGACACTGCGAATCTTC+TGG - chr4_1:56476029-56476048 None:intergenic 45.0%
TTAACCTTTACTCTCTGCCC+TGG - chr4_1:56476056-56476075 None:intergenic 45.0%
ACGCTTCTAAATCAGCAGGA+TGG + chr4_1:56476084-56476103 Msa0557930:CDS 45.0%
AAATCAGCAGGATGGCTATG+TGG + chr4_1:56476092-56476111 Msa0557930:CDS 45.0%
TTGTGCTGTCGATGCAAGTT+TGG + chr4_1:56476148-56476167 Msa0557930:CDS 45.0%
! GTGTGAAAAGCACGACAACA+CGG - chr4_1:56476261-56476280 None:intergenic 45.0%
GTTGAACAGTCTGTTCCTCT+TGG - chr4_1:56476322-56476341 None:intergenic 45.0%
! ACAAGAGGGTGTAAGAGTCA+GGG + chr4_1:56476374-56476393 Msa0557930:CDS 45.0%
TTCACTGGGAGTAAACTCTC+TGG - chr4_1:56476506-56476525 None:intergenic 45.0%
TTGGCCTCATCAGTTTGTAC+TGG + chr4_1:56476547-56476566 Msa0557930:CDS 45.0%
TCTTACGATCCTCTTAAGCC+TGG + chr4_1:56476581-56476600 Msa0557930:CDS 45.0%
! CTTTTACTGCCAGGCTTAAG+AGG - chr4_1:56476593-56476612 None:intergenic 45.0%
AAGCCTGGCAGTAAAAGATG+GGG + chr4_1:56476596-56476615 Msa0557930:CDS 45.0%
! TGCGAAGGAGCATACTGTAA+AGG + chr4_1:56476637-56476656 Msa0557930:CDS 45.0%
TTTGGATGGAGACGAAATGG+AGG + chr4_1:56476697-56476716 Msa0557930:CDS 45.0%
AAGGCGGCTCAAAAACAGTT+TGG + chr4_1:56476788-56476807 Msa0557930:CDS 45.0%
GTCGGGTAATGACATGAATG+CGG + chr4_1:56476838-56476857 Msa0557930:CDS 45.0%
CGGAGGCTGCTCTTAAAAAT+GGG + chr4_1:56476858-56476877 Msa0557930:CDS 45.0%
! TGGTGATGTGGAGGTGAAAT+TGG + chr4_1:56476958-56476977 Msa0557930:CDS 45.0%
TTCATAAGGCGGAACCTGTT+TGG - chr4_1:56477254-56477273 None:intergenic 45.0%
AATCATCTCTTGAGGAGCAG+GGG - chr4_1:56477314-56477333 None:intergenic 45.0%
CAATCATCTCTTGAGGAGCA+GGG - chr4_1:56477315-56477334 None:intergenic 45.0%
TCAATCATCTCTTGAGGAGC+AGG - chr4_1:56477316-56477335 None:intergenic 45.0%
CCTCAAGAGATGATTGAACG+CGG + chr4_1:56477319-56477338 Msa0557930:CDS 45.0%
!! CAGGACTTGTTAAGTGGTGA+TGG + chr4_1:56477680-56477699 Msa0557930:intron 45.0%
! TTCCTTTTTCCTTCCTCGAG+CGG + chr4_1:56477739-56477758 Msa0557930:CDS 45.0%
TGGAAGTTCCACCAAGTGTT+TGG - chr4_1:56477802-56477821 None:intergenic 45.0%
CTTGGTGGAACTTCCATTTC+AGG + chr4_1:56477806-56477825 Msa0557930:CDS 45.0%
CTGCATTGAACCACATCCAA+CGG + chr4_1:56477910-56477929 Msa0557930:CDS 45.0%
GTAGATTGCAACTCATCCGT+TGG - chr4_1:56477929-56477948 None:intergenic 45.0%
CATCCTTGAGAGAAGTCTTC+CGG + chr4_1:56478233-56478252 Msa0557930:CDS 45.0%
ATCCTTGAGAGAAGTCTTCC+GGG + chr4_1:56478234-56478253 Msa0557930:CDS 45.0%
TGCTACAGAAAGGCTTCTCA+TGG - chr4_1:56478319-56478338 None:intergenic 45.0%
ATTACATGAGTCACCGTCAC+CGG + chr4_1:56478378-56478397 Msa0557930:intron 45.0%
CTCATGCGAGCAGTAATTGT+TGG + chr4_1:56478888-56478907 Msa0557930:CDS 45.0%
GCAGTAATTGTTGGTGCAAC+TGG + chr4_1:56478897-56478916 Msa0557930:CDS 45.0%
ACTGGAACTCCGTATCATGA+CGG + chr4_1:56478915-56478934 Msa0557930:CDS 45.0%
AAGCTTACAGGTGGTTCGTT+AGG - chr4_1:56478978-56478997 None:intergenic 45.0%
! GGCCTTATAAACAATGGTGC+TGG - chr4_1:56479039-56479058 None:intergenic 45.0%
! GCGAAGGGCCTTATAAACAA+TGG - chr4_1:56479045-56479064 None:intergenic 45.0%
CAGATGGTGCACTACAATTC+TGG + chr4_1:56479140-56479159 Msa0557930:intron 45.0%
ATGGTGCACTACAATTCTGG+CGG + chr4_1:56479143-56479162 Msa0557930:CDS 45.0%
! TGAAGAATAGTGGAGGTTCC+AGG - chr4_1:56479260-56479279 None:intergenic 45.0%
CCTCAGCTCTACCTATTTGT+TGG - chr4_1:56479349-56479368 None:intergenic 45.0%
CCAACAAATAGGTAGAGCTG+AGG + chr4_1:56479346-56479365 Msa0557930:CDS 45.0%
TCTATTACGAAAGCCACCCA+AGG + chr4_1:56479433-56479452 Msa0557930:CDS 45.0%
!! TATCTTGAAGGCGCTTCCAT+TGG + chr4_1:56479628-56479647 Msa0557930:CDS 45.0%
! AGAGTGTCTCCTCCTTGCAA+TGG + chr4_1:56473717-56473736 Msa0557930:five_prime_UTR 50.0%
!! GCTTTGGAACCATTGCAAGG+AGG - chr4_1:56473729-56473748 None:intergenic 50.0%
GCAATGGTTCCAAAGCTTGG+TGG + chr4_1:56473733-56473752 Msa0557930:five_prime_UTR 50.0%
!! TCCAAAGCTTGGTGGTGATG+TGG + chr4_1:56473741-56473760 Msa0557930:five_prime_UTR 50.0%
TCCACATCACCACCAAGCTT+TGG - chr4_1:56473745-56473764 None:intergenic 50.0%
! GGTGGTGATGTGGAAGAAGA+TGG + chr4_1:56473751-56473770 Msa0557930:five_prime_UTR 50.0%
GGTGATGTGGAAGAAGATGG+TGG + chr4_1:56473754-56473773 Msa0557930:five_prime_UTR 50.0%
!! GTGGAAGAAGATGGTGGAAC+TGG + chr4_1:56473760-56473779 Msa0557930:five_prime_UTR 50.0%
! CAAGGACTCCAAAGTGCCAA+AGG - chr4_1:56475054-56475073 None:intergenic 50.0%
!! GGCACTTTGGAGTCCTTGAT+TGG + chr4_1:56475056-56475075 Msa0557930:five_prime_UTR 50.0%
GATTTGCCCGCCAGGATAAT+AGG - chr4_1:56475084-56475103 None:intergenic 50.0%
ATGCCGACGCAACAATAGAG+AGG - chr4_1:56475479-56475498 None:intergenic 50.0%
CTGTCCACTTGGATCTGACA+CGG - chr4_1:56475754-56475773 None:intergenic 50.0%
GTCAGATCCAAGTGGACAGA+TGG + chr4_1:56475755-56475774 Msa0557930:CDS 50.0%
ATCCAAGTGGACAGATGGGA+AGG + chr4_1:56475760-56475779 Msa0557930:CDS 50.0%
TCCAAGTGGACAGATGGGAA+GGG + chr4_1:56475761-56475780 Msa0557930:CDS 50.0%
TCGCAGTGTCCATACTATCC+AGG + chr4_1:56476035-56476054 Msa0557930:CDS 50.0%
CGCAGTGTCCATACTATCCA+GGG + chr4_1:56476036-56476055 Msa0557930:CDS 50.0%
ACTCTCTGCCCTGGATAGTA+TGG - chr4_1:56476047-56476066 None:intergenic 50.0%
CTATCCAGGGCAGAGAGTAA+AGG + chr4_1:56476049-56476068 Msa0557930:CDS 50.0%
CAGGATGGCTATGTGGAACT+TGG + chr4_1:56476099-56476118 Msa0557930:CDS 50.0%
! CTGGCTCGCTTCTGTTCTTT+CGG + chr4_1:56476181-56476200 Msa0557930:CDS 50.0%
TTGGAATCTTGCCAGCATGG+TGG - chr4_1:56476230-56476249 None:intergenic 50.0%
! CGACAACACGGTCAGGTTTT+TGG - chr4_1:56476249-56476268 None:intergenic 50.0%
! AAAAGCACGACAACACGGTC+AGG - chr4_1:56476256-56476275 None:intergenic 50.0%
! CGTGCTTTTCACACGCAAAC+TGG + chr4_1:56476267-56476286 Msa0557930:CDS 50.0%
! GACAAGAGGGTGTAAGAGTC+AGG + chr4_1:56476373-56476392 Msa0557930:CDS 50.0%
! ACACCCCATCTTTTACTGCC+AGG - chr4_1:56476602-56476621 None:intergenic 50.0%
!! ATGGGGTGTTGTCCAATGTG+TGG + chr4_1:56476613-56476632 Msa0557930:CDS 50.0%
TGTCCAATGTGTGGATGCGA+AGG + chr4_1:56476622-56476641 Msa0557930:CDS 50.0%
TGGGTGCTCAACTAGTTCGT+AGG - chr4_1:56476735-56476754 None:intergenic 50.0%
GGGTAATGACATGAATGCGG+AGG + chr4_1:56476841-56476860 Msa0557930:CDS 50.0%
GCGGAGGCTGCTCTTAAAAA+TGG + chr4_1:56476857-56476876 Msa0557930:CDS 50.0%
AGCGCAGGTAACAGTCATCA+GGG - chr4_1:56476910-56476929 None:intergenic 50.0%
! CGCTGTGTTGGCACTGTTAT+TGG + chr4_1:56476926-56476945 Msa0557930:CDS 50.0%
GTGGAGGTGAAATTGGCTAC+TGG + chr4_1:56476965-56476984 Msa0557930:CDS 50.0%
!! GGCTACTGGTTTCACAACCA+AGG + chr4_1:56476979-56476998 Msa0557930:CDS 50.0%
TGGCGCAATCCAAGTTCAGT+AGG - chr4_1:56477147-56477166 None:intergenic 50.0%
CCGCGTTCAATCATCTCTTG+AGG - chr4_1:56477322-56477341 None:intergenic 50.0%
AAAAGTTCAAAGGCCGCTCG+AGG - chr4_1:56477755-56477774 None:intergenic 50.0%
TGCAACTCATCCGTTGGATG+TGG - chr4_1:56477923-56477942 None:intergenic 50.0%
TACCCGGAAGACTTCTCTCA+AGG - chr4_1:56478239-56478258 None:intergenic 50.0%
TTAGGCTTGTGCTGTGGCAA+TGG - chr4_1:56478499-56478518 None:intergenic 50.0%
CTGGAACTCCGTATCATGAC+GGG + chr4_1:56478916-56478935 Msa0557930:CDS 50.0%
GTTCGTTAGGATACTCCGGA+GGG - chr4_1:56478965-56478984 None:intergenic 50.0%
GGTGGTTCGTTAGGATACTC+CGG - chr4_1:56478969-56478988 None:intergenic 50.0%
TGGTGCACTACAATTCTGGC+GGG + chr4_1:56479144-56479163 Msa0557930:CDS 50.0%
CTGCGCCTGTCCAAGTATTT+AGG - chr4_1:56479220-56479239 None:intergenic 50.0%
CTAAATACTTGGACAGGCGC+AGG + chr4_1:56479218-56479237 Msa0557930:CDS 50.0%
!!! GATGCAGCATTTTGAGGCAC+TGG + chr4_1:56479552-56479571 Msa0557930:intron 50.0%
!! TCGCAGGGTAGCTTGTTGGA+AGG - chr4_1:56474915-56474934 None:intergenic 55.0%
! GGTTTCGCAGGGTAGCTTGT+TGG - chr4_1:56474919-56474938 None:intergenic 55.0%
CCAAAGAAGATTTGCCCGCC+AGG - chr4_1:56475092-56475111 None:intergenic 55.0%
! CCTGGCGGGCAAATCTTCTT+TGG + chr4_1:56475089-56475108 Msa0557930:five_prime_UTR 55.0%
CTCACTACTGCTGCTGTCAC+TGG - chr4_1:56475598-56475617 None:intergenic 55.0%
CAGTGACAGCAGCAGTAGTG+AGG + chr4_1:56475596-56475615 Msa0557930:CDS 55.0%
TGCTCCGTGTCAGATCCAAG+TGG + chr4_1:56475747-56475766 Msa0557930:CDS 55.0%
ACCCTTCCCATCTGTCCACT+TGG - chr4_1:56475765-56475784 None:intergenic 55.0%
GTAACTAAGGGGCCATGGCT+CGG + chr4_1:56475894-56475913 Msa0557930:CDS 55.0%
TCACACGCAAACTGGCAGCT+TGG + chr4_1:56476275-56476294 Msa0557930:CDS 55.0%
! CAAACTGGCAGCTTGGTGAC+TGG + chr4_1:56476282-56476301 Msa0557930:CDS 55.0%
GTGCATGGTTGCAGACCAAG+AGG + chr4_1:56476304-56476323 Msa0557930:CDS 55.0%
GCTCCTTCGCATCCACACAT+TGG - chr4_1:56476628-56476647 None:intergenic 55.0%
CAGCGCAGGTAACAGTCATC+AGG - chr4_1:56476911-56476930 None:intergenic 55.0%
GACTGTTACCTGCGCTGTGT+TGG + chr4_1:56476914-56476933 Msa0557930:CDS 55.0%
TAACAGTGCCAACACAGCGC+AGG - chr4_1:56476925-56476944 None:intergenic 55.0%
GGTTCGTTAGGATACTCCGG+AGG - chr4_1:56478966-56478985 None:intergenic 55.0%
!! GGCTCTGAAGTGTGGAATCC+TGG + chr4_1:56479239-56479258 Msa0557930:CDS 55.0%
!!! GCAGCATTTTGAGGCACTGG+TGG + chr4_1:56479555-56479574 Msa0557930:intron 55.0%
!! GAAGGCGCTTCCATTGGATG+TGG + chr4_1:56479634-56479653 Msa0557930:CDS 55.0%
AACCAGAAGGGGACTTCTGC+AGG + chr4_1:56479673-56479692 Msa0557930:CDS 55.0%
ATCCTGCAGAAGTCCCCTTC+TGG - chr4_1:56479678-56479697 None:intergenic 55.0%
!! ATGGCTCGGTCGGGCTCAAA+GGG + chr4_1:56475908-56475927 Msa0557930:CDS 60.0%
CTGTGGATGCTCCACCATGC+TGG + chr4_1:56476216-56476235 Msa0557930:CDS 60.0%
! GCAGCTTGGTGACTGGTGCA+TGG + chr4_1:56476289-56476308 Msa0557930:CDS 60.0%
GGCCGCTCGAGGAAGGAAAA+AGG - chr4_1:56477744-56477763 None:intergenic 60.0%
GTTCAAAGGCCGCTCGAGGA+AGG - chr4_1:56477751-56477770 None:intergenic 60.0%
AGTCACCGTCACCGGAGACA+CGG + chr4_1:56478386-56478405 Msa0557930:intron 60.0%
GGCTAAGAGACCCGTGTCTC+CGG - chr4_1:56478400-56478419 None:intergenic 60.0%
!! CTAAGGGGCCATGGCTCGGT+CGG + chr4_1:56475898-56475917 Msa0557930:CDS 65.0%
!! TAAGGGGCCATGGCTCGGTC+GGG + chr4_1:56475899-56475918 Msa0557930:CDS 65.0%
CTTTGAGCCCGACCGAGCCA+TGG - chr4_1:56475909-56475928 None:intergenic 65.0%
!! CATGGCTCGGTCGGGCTCAA+AGG + chr4_1:56475907-56475926 Msa0557930:CDS 65.0%
CGGTCGGGCTCAAAGGGTTG+TGG + chr4_1:56475914-56475933 Msa0557930:CDS 65.0%
GTCACCGTCACCGGAGACAC+GGG + chr4_1:56478387-56478406 Msa0557930:intron 65.0%
GAGACCCGTGTCTCCGGTGA+CGG - chr4_1:56478394-56478413 None:intergenic 65.0%
!! CAGGCGCAGGCTCTGAAGTG+TGG + chr4_1:56479231-56479250 Msa0557930:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 56473641 56479804 56473641 ID=Msa0557930;Name=Msa0557930
chr4_1 mRNA 56473641 56479804 56473641 ID=Msa0557930-mRNA-1;Parent=Msa0557930;Name=Msa0557930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1167|0.87|0.88|1|0.75|0.66|9|12|903
chr4_1 exon 56473641 56473952 56473641 ID=Msa0557930-mRNA-1:exon:16946;Parent=Msa0557930-mRNA-1
chr4_1 exon 56474464 56475307 56474464 ID=Msa0557930-mRNA-1:exon:16947;Parent=Msa0557930-mRNA-1
chr4_1 exon 56475547 56477000 56475547 ID=Msa0557930-mRNA-1:exon:16948;Parent=Msa0557930-mRNA-1
chr4_1 exon 56477259 56477369 56477259 ID=Msa0557930-mRNA-1:exon:16949;Parent=Msa0557930-mRNA-1
chr4_1 exon 56477683 56478117 56477683 ID=Msa0557930-mRNA-1:exon:16950;Parent=Msa0557930-mRNA-1
chr4_1 exon 56478192 56478255 56478192 ID=Msa0557930-mRNA-1:exon:16951;Parent=Msa0557930-mRNA-1
chr4_1 exon 56478877 56478989 56478877 ID=Msa0557930-mRNA-1:exon:16952;Parent=Msa0557930-mRNA-1
chr4_1 exon 56479143 56479454 56479143 ID=Msa0557930-mRNA-1:exon:16953;Parent=Msa0557930-mRNA-1
chr4_1 exon 56479559 56479804 56479559 ID=Msa0557930-mRNA-1:exon:16954;Parent=Msa0557930-mRNA-1
chr4_1 five_prime_UTR 56473641 56473952 56473641 ID=Msa0557930-mRNA-1:five_prime_utr;Parent=Msa0557930-mRNA-1
chr4_1 five_prime_UTR 56474464 56475307 56474464 ID=Msa0557930-mRNA-1:five_prime_utr;Parent=Msa0557930-mRNA-1
chr4_1 five_prime_UTR 56475547 56475557 56475547 ID=Msa0557930-mRNA-1:five_prime_utr;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56475558 56477000 56475558 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56477259 56477369 56477259 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56477683 56478117 56477683 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56478192 56478255 56478192 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56478877 56478989 56478877 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56479143 56479454 56479143 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 CDS 56479559 56479792 56479559 ID=Msa0557930-mRNA-1:cds;Parent=Msa0557930-mRNA-1
chr4_1 three_prime_UTR 56479793 56479804 56479793 ID=Msa0557930-mRNA-1:three_prime_utr;Parent=Msa0557930-mRNA-1
Gene Sequence

>Msa0557930

ATGGATGCTATGAGTAGTGATTCGGAATGGGAGAGTTCCAGTGACAGCAGCAGTAGTGAGGATCAAGAAGAAATTGATTTTCAATATGGTGGTCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGAACTTTTGTTCATGGTGATGTGGTCTGCTCCGTGTCAGATCCAAGTGGACAGATGGGAAGGGTGACAAGTGTTGATTTGTTTGTGGACTTGGAAAATGTTAAAGGAAAGGTATTAAAAAATGTAAACTCGGACAAACTTTCGAAGATTCGGTCCATTTCAGAAGGTGATTATGTAACTAAGGGGCCATGGCTCGGTCGGGCTCAAAGGGTTGTGGACAAAGTTACTGTATTGTTTGACGATGGAGCTAAATCCGATATCATTGCCTTAGAAAGAGAAAAGGTTTTACCATTGACTCGTAAATTTCCAGAAGATTCGCAGTGTCCATACTATCCAGGGCAGAGAGTAAAGGTTAAGTCCTACAACGCTTCTAAATCAGCAGGATGGCTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTGCTGTCGATGCAAGTTTGGTGTGTGTTAACTGGCTCGCTTCTGTTCTTTCGGATAGCAATTTGACTGTGGATGCTCCACCATGCTGGCAAGATTCCAAAAACCTGACCGTGTTGTCGTGCTTTTCACACGCAAACTGGCAGCTTGGTGACTGGTGCATGGTTGCAGACCAAGAGGAACAGACTGTTCAACATGCACCCACACGAAGTCTTACTATGAGTATGACAAGAGGGTGTAAGAGTCAGGGAAGAAACCTTGTTAACTCTTGTATTGGGGAATTTTTTATAATTGGGAAGATAAAGACCAAAGTTGACATTTTGTGGCAAAATGGTGAACATAGTTTGGGATTAAATCCAGAGAGTTTACTCCCAGTGAATGTTATAAACACACATGAATTTTGGCCTCATCAGTTTGTACTGGAAAAAGGTGTTTCTTACGATCCTCTTAAGCCTGGCAGTAAAAGATGGGGTGTTGTCCAATGTGTGGATGCGAAGGAGCATACTGTAAAGGTACAATGGAAAACTGTTTCCATGTCCAAACCGAATAGTTTGGATGGAGACGAAATGGAGGAAACTGTGAGTGCCTACGAACTAGTTGAGCACCCAGATTACTCCTGTTTTTTTGGTGATATTATGTTCAAGGCGGCTCAAAAACAGTTTGGTTACCAAGCTGATAAAGATACAGAAAAGTCGGGTAATGACATGAATGCGGAGGCTGCTCTTAAAAATGGGAACCAAATGAATTATCAAGATGACTTCCCTGATGACTGTTACCTGCGCTGTGTTGGCACTGTTATTGGTTTCAAAGATGGTGATGTGGAGGTGAAATTGGCTACTGGTTTCACAACCAAGGTTCCGCCTTATGAAATTTTTCGGATTGATAAACACGAAGGTGCAACTGTAACCCCTGCTCCTCAAGAGATGATTGAACGCGGAAGTCTACCTTCTGATAAGAAGGGAAAGGACTTGTTAAGTGGTGATGGTAGAAAAGAGAATTTGGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCTCGAGCGGCCTTTGAACTTTTTTCCCGTATTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCAGTGCCTAAATTTGAAATGGATAACGAATCAGATTATCCTGATAAGAAAGATTTGGAAACTTGTAATTTCTGCATTGAACCACATCCAACGGATGAGTTGCAATCTACTGAAGACAGAACTTCATATCCAGAAGTTATTAGGATCCATGACAAGAATGATTTTCCGCTTTCTTTAGAAAGCAACAGTTCAAACCAGTTTAAGCAGTTTGATGTTATAGAAAATTGTTCTGAGGACCACCATTTTTTTGATGAGGGAAAAGAATTGTCAACATTGCAGGTAAAAAAAGGTTGGGTGAAAAAGGTTCAACAAGAATGGAGCATCCTTGAGAGAAGTCTTCCGGAAAGAATGGATCTCATGCGAGCAGTAATTGTTGGTGCAACTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCGGAGTATCCTAACGAACCACCTATGGTGCACTACAATTCTGGCGGGCTCCGCCTAAATCCTAATTTATATGAATCAGGGAAAATCTGTCTGAGTCTCCTAAATACTTGGACAGGCGCAGGCTCTGAAGTGTGGAATCCTGGAACCTCCACTATTCTTCAAGTTCTTCTCTCTCTACAGGCTCTTGTCCTTAATGAGAAGCCTTACTTTAATGAGGCTGGTTATGACCAACAAATAGGTAGAGCTGAGGGAGAGAAAAATTCTGTGAGCTATAATGAGAATGCTTTCCTTGTCACAGCCAAATCTATGTTGTATCTATTACGAAAGCCACCCAAGCATTTTGAGGCACTGGTGGAAGAGCACTTCGAAAAGCGCTCCAAACATATACTTTTGGCTTGTAAAGCATATCTTGAAGGCGCTTCCATTGGATGTGGAAAAACTGAACATGAAAACCAGAAGGGGACTTCTGCAGGATTTAAAATAATGCTTGCTAAGCTCTTCCCCAAGCTTGTAGAAGCCTTTTGTGACAAGGGAATTGATTCCAGTCAGTTTGTTGAGTTGCAAGAATAA
Protein sequence

>Msa0557930

MDAMSSDSEWESSSDSSSSEDQEEIDFQYGGQAQSILSSLEESIGKIDDFLSFERTFVHGDVVCSVSDPSGQMGRVTSVDLFVDLENVKGKVLKNVNSDKLSKIRSISEGDYVTKGPWLGRAQRVVDKVTVLFDDGAKSDIIALEREKVLPLTRKFPEDSQCPYYPGQRVKVKSYNASKSAGWLCGTWRDNQDEGTVCAVDASLVCVNWLASVLSDSNLTVDAPPCWQDSKNLTVLSCFSHANWQLGDWCMVADQEEQTVQHAPTRSLTMSMTRGCKSQGRNLVNSCIGEFFIIGKIKTKVDILWQNGEHSLGLNPESLLPVNVINTHEFWPHQFVLEKGVSYDPLKPGSKRWGVVQCVDAKEHTVKVQWKTVSMSKPNSLDGDEMEETVSAYELVEHPDYSCFFGDIMFKAAQKQFGYQADKDTEKSGNDMNAEAALKNGNQMNYQDDFPDDCYLRCVGTVIGFKDGDVEVKLATGFTTKVPPYEIFRIDKHEGATVTPAPQEMIERGSLPSDKKGKDLLSGDGRKENLEQNLECSSFFLPRAAFELFSRIKSSIFQTLGGTSISGAFSSVPKFEMDNESDYPDKKDLETCNFCIEPHPTDELQSTEDRTSYPEVIRIHDKNDFPLSLESNSSNQFKQFDVIENCSEDHHFFDEGKELSTLQVKKGWVKKVQQEWSILERSLPERMDLMRAVIVGATGTPYHDGLFFFDICFPPEYPNEPPMVHYNSGGLRLNPNLYESGKICLSLLNTWTGAGSEVWNPGTSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTAKSMLYLLRKPPKHFEALVEEHFEKRSKHILLACKAYLEGASIGCGKTEHENQKGTSAGFKIMLAKLFPKLVEAFCDKGIDSSQFVELQE*