AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0612660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612660 MtrunA17_Chr4g0047301 95.514 914 39 1 1 912 1 914 0.0 1781
Msa0612660 MtrunA17_Chr2g0282211 69.053 908 259 8 22 912 22 924 0.0 1236
Msa0612660 MtrunA17_Chr1g0211131 37.311 662 353 14 294 912 428 1070 3.55e-131 421
Msa0612660 MtrunA17_Chr1g0211131 44.286 210 115 2 42 250 92 300 5.02e-44 173
Msa0612660 MtrunA17_Chr4g0009054 53.823 327 128 3 347 664 3 315 6.50e-103 322
Msa0612660 MtrunA17_Chr1g0198021 55.720 271 112 4 637 902 108 375 4.90e-98 312
Msa0612660 MtrunA17_Chr2g0317631 54.676 278 117 5 637 908 277 551 1.15e-92 306
Msa0612660 MtrunA17_Chr8g0376201 58.442 231 95 1 636 866 160 389 1.53e-91 298
Msa0612660 MtrunA17_Chr8g0360171 55.556 270 112 4 637 901 472 738 2.10e-86 292
Msa0612660 MtrunA17_Chr8g0376111 50.622 241 103 3 622 862 10 234 2.30e-75 249
Msa0612660 MtrunA17_Chr2g0317641 63.218 174 62 1 696 867 1 174 4.69e-75 243
Msa0612660 MtrunA17_Chr7g0233611 50.893 224 109 1 639 862 7 229 7.25e-72 240
Msa0612660 MtrunA17_Chr7g0222941 61.364 176 65 2 637 812 61 233 2.44e-70 233
Msa0612660 MtrunA17_Chr4g0045101 51.628 215 102 2 649 862 15 228 5.67e-70 234
Msa0612660 MtrunA17_Chr7g0233631 45.490 255 122 4 622 876 5 242 3.66e-69 233
Msa0612660 MtrunA17_Chr2g0285321 47.196 214 103 5 696 901 1 212 4.17e-51 178
Msa0612660 MtrunA17_Chr2g0317611 64.912 114 37 2 637 750 64 174 7.88e-46 162
Msa0612660 MtrunA17_Chr2g0317621 50.467 107 51 1 762 866 14 120 5.21e-32 124
Msa0612660 MtrunA17_Chr4g0001491 41.558 154 80 1 682 835 153 296 2.06e-31 125
Msa0612660 MtrunA17_Chr5g0432831 30.000 150 92 4 670 816 4 143 4.86e-13 67.4
Msa0612660 MtrunA17_Chr4g0037011 30.000 150 92 4 670 816 4 143 6.62e-13 67.0
Msa0612660 MtrunA17_Chr3g0108261 29.333 150 93 4 670 816 4 143 1.75e-12 65.9
Msa0612660 MtrunA17_Chr7g0275361 29.333 150 93 4 670 816 4 143 2.71e-12 65.5
Msa0612660 MtrunA17_Chr8g0378601 36.559 93 47 4 701 792 56 137 6.62e-12 64.7
Msa0612660 MtrunA17_Chr1g0154011 27.333 150 96 4 670 816 4 143 4.60e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612660 AT2G33770.1 48.185 909 421 13 21 906 20 901 0.0 831
Msa0612660 AT2G16920.1 38.003 671 352 15 290 912 447 1101 2.14e-129 417
Msa0612660 AT2G16920.1 39.768 259 150 4 30 283 118 375 1.64e-51 197
Msa0612660 AT2G16920.2 38.003 671 352 15 290 912 447 1101 2.14e-129 417
Msa0612660 AT2G16920.2 39.768 259 150 4 30 283 118 375 1.64e-51 197
Msa0612660 AT1G53025.1 53.875 271 117 4 637 902 244 511 6.22e-91 299
Msa0612660 AT1G53025.2 53.875 271 117 4 637 902 244 511 1.52e-90 298
Msa0612660 AT3G15355.1 56.087 230 98 2 637 866 305 531 4.05e-86 288
Msa0612660 AT1G53023.1 49.091 275 120 5 637 901 21 285 2.83e-82 268
Msa0612660 AT1G64230.2 30.000 150 92 4 670 816 4 143 5.64e-13 67.8
Msa0612660 AT1G64230.1 30.000 150 92 4 670 816 4 143 5.64e-13 67.8
Msa0612660 AT5G41700.5 29.333 150 93 4 670 816 4 143 3.33e-12 65.5
Msa0612660 AT5G41700.2 29.333 150 93 4 670 816 4 143 3.33e-12 65.5
Msa0612660 AT5G41700.1 29.333 150 93 4 670 816 4 143 3.33e-12 65.5
Msa0612660 AT4G27960.1 32.787 122 72 3 670 791 4 115 4.49e-12 65.1
Msa0612660 AT5G41700.4 29.801 151 92 5 670 816 4 144 5.79e-12 65.1
Msa0612660 AT5G53300.2 32.787 122 72 3 670 791 4 115 7.26e-12 64.7
Msa0612660 AT5G53300.4 32.787 122 72 3 670 791 4 115 7.26e-12 64.7
Msa0612660 AT5G53300.1 32.787 122 72 3 670 791 4 115 7.26e-12 64.7
Msa0612660 AT1G64230.3 32.540 126 72 4 694 816 37 152 7.81e-12 64.7
Msa0612660 AT3G08690.2 29.333 150 93 4 670 816 4 143 8.48e-12 64.3
Msa0612660 AT3G08690.1 29.333 150 93 4 670 816 4 143 8.48e-12 64.3
Msa0612660 AT1G64230.5 32.500 120 68 4 700 816 76 185 1.22e-11 65.1
Msa0612660 AT1G64230.4 32.500 120 68 4 700 816 76 185 1.22e-11 65.1
Msa0612660 AT4G27960.2 32.787 122 72 3 670 791 34 145 2.08e-11 63.9
Msa0612660 AT5G56150.1 28.000 150 95 4 670 816 4 143 7.78e-11 61.6

Find 293 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTCTATCAGGTTTATT+TGG 0.135335 4_2:-61144410 None:intergenic
TCTTACACTTACTCATAAAT+AGG 0.150905 4_2:-61143464 None:intergenic
TCAAACACACGAACATAAAT+AGG 0.153119 4_2:-61148678 None:intergenic
CGCTGTGTTGGCACTGTTAT+TGG 0.163936 4_2:+61146751 Msa0612660:CDS
TTATAAACACACATGAATTT+TGG 0.167148 4_2:+61146353 Msa0612660:CDS
TAAAGTAAGGCTTCTCATTA+AGG 0.222829 4_2:-61149133 None:intergenic
GTGGACTTGGAAAATGTTAA+AGG 0.236097 4_2:+61145629 Msa0612660:CDS
TTCCCTGATTCATATAAATT+AGG 0.237543 4_2:-61149005 None:intergenic
CTTCATATCCAGAAGTTATT+AGG 0.238791 4_2:+61147790 Msa0612660:CDS
TATGAGTAAGTGTAAGAAAA+AGG 0.242511 4_2:+61143470 Msa0612660:five_prime_UTR
TCATTATCCATTTCAAATTT+AGG 0.243628 4_2:-61147675 None:intergenic
AGCAAATAATGGAGTTTCTT+TGG 0.244138 4_2:+61143706 Msa0612660:five_prime_UTR
CTTGGTGGAACTTCCATTTC+AGG 0.247256 4_2:+61147636 Msa0612660:CDS
TCTAGTCGAGATAATCTTTC+GGG 0.270138 4_2:+61144960 Msa0612660:five_prime_UTR
GTTTCCAACTCTTTCTTATC+AGG 0.272030 4_2:-61147708 None:intergenic
AATCCTAATTTATATGAATC+AGG 0.272096 4_2:+61149002 Msa0612660:CDS
ACCTTGTTAACTCTTGTATT+GGG 0.272160 4_2:+61146227 Msa0612660:CDS
CTGCGCCTGTCCAAGTATTT+AGG 0.279333 4_2:-61149043 None:intergenic
TCTTAGAACTCCACCTATTC+TGG 0.281855 4_2:+61144648 Msa0612660:five_prime_UTR
AACTTCCTTTGGTTGGATTC+AGG 0.288084 4_2:+61144562 Msa0612660:five_prime_UTR
ATTTACCCTTAACAAATTCT+TGG 0.288357 4_2:+61143651 Msa0612660:five_prime_UTR
GAATATGCTGGATTTAATAC+TGG 0.292872 4_2:-61147607 None:intergenic
AACCTTGTTAACTCTTGTAT+TGG 0.293332 4_2:+61146226 Msa0612660:CDS
GGCACTTTGGAGTCCTTGAT+TGG 0.297515 4_2:+61144878 Msa0612660:five_prime_UTR
AAAGCCTAAAATTCTCTATC+AGG 0.297661 4_2:-61144419 None:intergenic
CTGGCTCGCTTCTGTTCTTT+CGG 0.300150 4_2:+61146006 Msa0612660:CDS
TGAAATATTTCATTCGCAAT+TGG 0.300733 4_2:+61144842 Msa0612660:five_prime_UTR
CCTGGCGGGCAAATCTTCTT+TGG 0.304204 4_2:+61144911 Msa0612660:five_prime_UTR
GCGCTCCAAACATATACTTT+TGG 0.309942 4_2:+61149420 Msa0612660:CDS
CATGTCCAAACCGAATAGTT+TGG 0.311035 4_2:+61146504 Msa0612660:CDS
TATGGACACTGCGAATCTTC+TGG 0.314809 4_2:-61145851 None:intergenic
ACAAGCCAAAAGTATATGTT+TGG 0.318477 4_2:-61149425 None:intergenic
CTCAGTGCCTAAATTTGAAA+TGG 0.325018 4_2:+61147668 Msa0612660:CDS
GATTTGCCCGCCAGGATAAT+AGG 0.326257 4_2:-61144903 None:intergenic
TGTTGATTTGTTTGTGGACT+TGG 0.327847 4_2:+61145616 Msa0612660:CDS
CAAGTTTGGTGTGTGTTAAC+TGG 0.327864 4_2:+61145987 Msa0612660:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.331175 4_2:-61145869 None:intergenic
GAGCATATTATCAAGTTTAG+AGG 0.332505 4_2:+61145484 Msa0612660:CDS
CATCAGTTTGTACTGGAAAA+AGG 0.334327 4_2:+61146379 Msa0612660:CDS
CATGGCTCGGTCGGGCTCAA+AGG 0.334629 4_2:+61145732 Msa0612660:CDS
CAGATGGTGCACTACAATTC+TGG 0.336019 4_2:+61148966 Msa0612660:intron
GGCCGCTCGAGGAAGGAAAA+AGG 0.340433 4_2:-61147571 None:intergenic
AAAAGTTACTGAACTTCCTT+TGG 0.341025 4_2:+61144551 Msa0612660:five_prime_UTR
GCAGTAATTGTTGGTGCAAC+TGG 0.345129 4_2:+61148723 Msa0612660:CDS
TCTTTCTAAGGCAATGATAT+CGG 0.347103 4_2:-61145798 None:intergenic
TGGAAGTTCCACCAAGTGTT+TGG 0.349299 4_2:-61147629 None:intergenic
AGTCATCTTGATAATTCATT+TGG 0.349814 4_2:-61146708 None:intergenic
GCAAAATGGTGAACATAGTT+TGG 0.354706 4_2:+61146297 Msa0612660:CDS
CCTCAGCTCTACCTATTTGT+TGG 0.355681 4_2:-61149172 None:intergenic
TGATGGTAGAAAAGAGAATT+TGG 0.358050 4_2:+61147527 Msa0612660:CDS
TAACATCAAACTGCTTAAAC+TGG 0.358400 4_2:-61147863 None:intergenic
TTGAAGCTGACAGCAAATAA+TGG 0.358589 4_2:+61143695 Msa0612660:five_prime_UTR
CTTACACTTACTCATAAATA+GGG 0.358897 4_2:-61143463 None:intergenic
CTTCTTTGGCATCAGATCTC+TGG 0.362072 4_2:+61144925 Msa0612660:five_prime_UTR
TCGTCTCCATCCAAACTATT+CGG 0.364995 4_2:-61146514 None:intergenic
AAAAGAATTGTCAACATTGC+AGG 0.365225 4_2:+61147926 Msa0612660:CDS
GAAGATGGTGGAACTGGAAT+TGG 0.370713 4_2:+61143584 Msa0612660:five_prime_UTR
CAAAAGGCTTCTACAAGCTT+GGG 0.370783 4_2:-61149550 None:intergenic
TCAAGTTCTTCTCTCTCTAC+AGG 0.375552 4_2:+61149103 Msa0612660:CDS
TACATAATCACCTTCTGAAA+TGG 0.376474 4_2:-61145699 None:intergenic
CAAATTTCCTTTGGCAATCT+CGG 0.376698 4_2:+61144452 Msa0612660:five_prime_UTR
ATCCTGCAGAAGTCCCCTTC+TGG 0.376940 4_2:-61149501 None:intergenic
TCATGGATCCTAATAACTTC+TGG 0.378132 4_2:-61147798 None:intergenic
TCCACATCACCACCAAGCTT+TGG 0.378797 4_2:-61143560 None:intergenic
TGGTGATGTGGAGGTGAAAT+TGG 0.381248 4_2:+61146783 Msa0612660:CDS
GCAATTGGGCATATCTCCTT+TGG 0.387447 4_2:+61144857 Msa0612660:five_prime_UTR
CATCCTTGAGAGAAGTCTTC+CGG 0.389453 4_2:+61148063 Msa0612660:CDS
GAGGTAGGTGTTGTTCAAAT+AGG 0.390767 4_2:-61143614 None:intergenic
GCTGGTTATGACCAACAAAT+AGG 0.391028 4_2:+61149161 Msa0612660:CDS
GAGAAGAACTTGAAGAATAG+TGG 0.392888 4_2:-61149093 None:intergenic
TGAAGAATAGTGGAGGTTCC+AGG 0.394764 4_2:-61149083 None:intergenic
CTAAGGGGCCATGGCTCGGT+CGG 0.396317 4_2:+61145723 Msa0612660:CDS
ATCAATTCCCTTATCACAAA+AGG 0.396332 4_2:-61149566 None:intergenic
GAAATATTTCATTCGCAATT+GGG 0.399128 4_2:+61144843 Msa0612660:five_prime_UTR
TGCTGATTTAGAAGCGTTGT+AGG 0.399875 4_2:-61145903 None:intergenic
GACAAGAGGGTGTAAGAGTC+AGG 0.400833 4_2:+61146198 Msa0612660:CDS
TAATAGATACAACATAGATT+TGG 0.401612 4_2:-61149243 None:intergenic
GGCTCTGAAGTGTGGAATCC+TGG 0.402574 4_2:+61149065 Msa0612660:CDS
CAAAATGGTGAACATAGTTT+GGG 0.404147 4_2:+61146298 Msa0612660:CDS
TTGATTGGTTCCTATTATCC+TGG 0.406512 4_2:+61144893 Msa0612660:five_prime_UTR
GCATATCTCCTTTGGCACTT+TGG 0.407548 4_2:+61144865 Msa0612660:five_prime_UTR
TCCATCCAAACTATTCGGTT+TGG 0.408736 4_2:-61146509 None:intergenic
TGTGTGTTTATAACATTCAC+TGG 0.409667 4_2:-61146343 None:intergenic
TTCTGGAGGCAAATCTCCTT+TGG 0.410170 4_2:+61144665 Msa0612660:five_prime_UTR
CTTGCAATGGTTCCAAAGCT+TGG 0.411404 4_2:+61143548 Msa0612660:five_prime_UTR
AAGCTTACAGGTGGTTCGTT+AGG 0.414305 4_2:-61148801 None:intergenic
CAGAATATATTTCTGTTGAA+TGG 0.415657 4_2:+61144346 Msa0612660:five_prime_UTR
TGAGGAAAATGCTCCTGAAA+TGG 0.419447 4_2:-61147649 None:intergenic
ATGGCTCGGTCGGGCTCAAA+GGG 0.420283 4_2:+61145733 Msa0612660:CDS
ACCCTTCCCATCTGTCCACT+TGG 0.421233 4_2:-61145587 None:intergenic
AGAAGGTGATTATGTAACTA+AGG 0.421683 4_2:+61145706 Msa0612660:CDS
ATCCTTGAGAGAAGTCTTCC+GGG 0.423857 4_2:+61148064 Msa0612660:CDS
GTCTAGTCGAGATAATCTTT+CGG 0.423878 4_2:+61144959 Msa0612660:five_prime_UTR
AACTACCAAGAATTTGTTAA+GGG 0.424521 4_2:-61143656 None:intergenic
AGAATGGTCAATATTTAATC+AGG 0.425529 4_2:-61144378 None:intergenic
GTGGAAGAAGATGGTGGAAC+TGG 0.427264 4_2:+61143578 Msa0612660:five_prime_UTR
TATGATATACACCTTTGAAA+TGG 0.428460 4_2:-61143760 None:intergenic
AACCAGAAGGGGACTTCTGC+AGG 0.428580 4_2:+61149499 Msa0612660:CDS
TATGCTGATGATATCTTCAA+TGG 0.437614 4_2:-61145057 None:intergenic
TTGCCACAAAATGTCAACTT+TGG 0.438550 4_2:-61146278 None:intergenic
AAGCCTTACTTTAATGAGGC+TGG 0.438912 4_2:+61149143 Msa0612660:CDS
GACAAGTGTTGATTTGTTTG+TGG 0.439155 4_2:+61145610 Msa0612660:CDS
AAACTACCAAGAATTTGTTA+AGG 0.439419 4_2:-61143657 None:intergenic
GTCTGAGTCTCCTAAATACT+TGG 0.441688 4_2:+61149033 Msa0612660:CDS
CAGGATGGCTATGTGGAACT+TGG 0.442039 4_2:+61145924 Msa0612660:CDS
TAGTGCGGGCAAATTTCCTT+TGG 0.442096 4_2:+61144443 Msa0612660:five_prime_UTR
GTTGAACAGTCTGTTCCTCT+TGG 0.445698 4_2:-61146144 None:intergenic
CAAACACACGAACATAAATA+GGG 0.447129 4_2:-61148677 None:intergenic
TTTCTGTATCTTTATCAGCT+TGG 0.448025 4_2:-61146639 None:intergenic
GGTTTCGCAGGGTAGCTTGT+TGG 0.449728 4_2:-61144738 None:intergenic
ATTCACAGCAAGTAGGCAAA+AGG 0.450159 4_2:-61144316 None:intergenic
TAGTTTGGATGGAGACGAAA+TGG 0.451117 4_2:+61146519 Msa0612660:CDS
GTTACTGAACTTCCTTTGGT+TGG 0.451645 4_2:+61144555 Msa0612660:five_prime_UTR
TCAATCATCTCTTGAGGAGC+AGG 0.452258 4_2:-61147138 None:intergenic
CAGCGCAGGTAACAGTCATC+AGG 0.452698 4_2:-61146733 None:intergenic
CTCACTACTGCTGCTGTCAC+TGG 0.452824 4_2:-61145420 None:intergenic
TAAGGGGCCATGGCTCGGTC+GGG 0.453566 4_2:+61145724 Msa0612660:CDS
CGGTCGGGCTCAAAGGGTTG+TGG 0.453882 4_2:+61145739 Msa0612660:CDS
ACAAAAGGCTTCTACAAGCT+TGG 0.456304 4_2:-61149551 None:intergenic
ACCAAGTGTTTGGAATATGC+TGG 0.459562 4_2:-61147619 None:intergenic
TCTGGAAATTTACGAGTCAA+TGG 0.462644 4_2:-61145833 None:intergenic
GTTTGAAGATTCCTGTGTAC+TGG 0.462850 4_2:+61144512 Msa0612660:five_prime_UTR
TGTACTGGACAAATCTCCTT+TGG 0.464578 4_2:+61144527 Msa0612660:five_prime_UTR
TTGGCCTCATCAGTTTGTAC+TGG 0.464675 4_2:+61146372 Msa0612660:CDS
GCTTGTAAAGCATATCTTGA+AGG 0.469930 4_2:+61149442 Msa0612660:CDS
AGGAGATTTGCCTCCAGAAT+AGG 0.471833 4_2:-61144661 None:intergenic
TATCTTGAAGGCGCTTCCAT+TGG 0.473818 4_2:+61149454 Msa0612660:CDS
ACTGTTATTGGTTTCAAAGA+TGG 0.475922 4_2:+61146763 Msa0612660:CDS
TCGCAGTGTCCATACTATCC+AGG 0.476869 4_2:+61145860 Msa0612660:CDS
CAAACTATTCGGTTTGGACA+TGG 0.477382 4_2:-61146503 None:intergenic
TGAGAAGCCTTACTTTAATG+AGG 0.477468 4_2:+61149139 Msa0612660:CDS
CCCCAATACAAGAGTTAACA+AGG 0.479939 4_2:-61146228 None:intergenic
TAAATATTTGAAGAGGGAAG+AGG 0.480249 4_2:-61143633 None:intergenic
TTGTGCTGTCGATGCAAGTT+TGG 0.480632 4_2:+61145973 Msa0612660:CDS
ATATACACCTTTGAAATGGT+TGG 0.481448 4_2:-61143756 None:intergenic
TTAAGCCTGGCAGTAAAAGA+TGG 0.487073 4_2:+61146419 Msa0612660:CDS
AAGTCTACCTTCTGATAAGA+AGG 0.487556 4_2:+61147167 Msa0612660:CDS
CCAAAGAAGATTTGCCCGCC+AGG 0.488608 4_2:-61144911 None:intergenic
TCAAGTTTAGAGGAAAGCAT+TGG 0.490374 4_2:+61145494 Msa0612660:CDS
CGGACAAACTTTCGAAGATT+CGG 0.491223 4_2:+61145675 Msa0612660:CDS
GTCAGATCCAAGTGGACAGA+TGG 0.493007 4_2:+61145580 Msa0612660:CDS
AAATATTGACCATTCTCCCT+TGG 0.495239 4_2:+61144385 Msa0612660:five_prime_UTR
TGTGACAGGCATATAATTGA+TGG 0.496070 4_2:+61145364 Msa0612660:intron
CAAGTTTAGAGGAAAGCATT+GGG 0.497314 4_2:+61145495 Msa0612660:CDS
CATTGCCTTAGAAAGAGAAA+AGG 0.497528 4_2:+61145805 Msa0612660:CDS
AAAAGCACGACAACACGGTC+AGG 0.500051 4_2:-61146078 None:intergenic
TATTTGGTACCAAGGGAGAA+TGG 0.504467 4_2:-61144394 None:intergenic
ACCTTTCCCTTCTTATCAGA+AGG 0.504832 4_2:-61147174 None:intergenic
AATGTTCAGGACTTGTTAAG+TGG 0.505536 4_2:+61147504 Msa0612660:intron
ATGCTTCAATTTGCTTGAGA+AGG 0.505815 4_2:+61145111 Msa0612660:five_prime_UTR
TGCAACTCATCCGTTGGATG+TGG 0.506708 4_2:-61147750 None:intergenic
TAACCAGCCTCATTAAAGTA+AGG 0.506806 4_2:-61149146 None:intergenic
CAAACTGGCAGCTTGGTGAC+TGG 0.507507 4_2:+61146107 Msa0612660:CDS
ATCCTAATTTATATGAATCA+GGG 0.512462 4_2:+61149003 Msa0612660:CDS
CTTTGATATATGTTTCCCTC+CGG 0.513418 4_2:+61148773 Msa0612660:CDS
TCGTGTGTTTGAAGAAAGAA+TGG 0.514633 4_2:+61148689 Msa0612660:CDS
GATAAAGATACAGAAAAGTC+GGG 0.517044 4_2:+61146646 Msa0612660:CDS
TCTTACGATCCTCTTAAGCC+TGG 0.518535 4_2:+61146406 Msa0612660:CDS
GACTGTTACCTGCGCTGTGT+TGG 0.520842 4_2:+61146739 Msa0612660:CDS
CTGTGGATGCTCCACCATGC+TGG 0.521980 4_2:+61146041 Msa0612660:CDS
TCACACGCAAACTGGCAGCT+TGG 0.522952 4_2:+61146100 Msa0612660:CDS
GAAGGTGATTATGTAACTAA+GGG 0.524599 4_2:+61145707 Msa0612660:CDS
TGATAAAGATACAGAAAAGT+CGG 0.525150 4_2:+61146645 Msa0612660:CDS
CTCATGCGAGCAGTAATTGT+TGG 0.526875 4_2:+61148714 Msa0612660:CDS
TAAGCCTGGCAGTAAAAGAT+GGG 0.527531 4_2:+61146420 Msa0612660:CDS
ATCAGGTTTATTTGGTACCA+AGG 0.528647 4_2:-61144402 None:intergenic
GCGGAAAATCATTCTTGTCA+TGG 0.528752 4_2:-61147815 None:intergenic
CTTCTTGATTCACAGCAAGT+AGG 0.530094 4_2:-61144323 None:intergenic
TTAACCTTTACTCTCTGCCC+TGG 0.532334 4_2:-61145878 None:intergenic
TTCACTGGGAGTAAACTCTC+TGG 0.532864 4_2:-61146328 None:intergenic
ATACCTTTACTAGCTTATGC+TGG 0.533296 4_2:+61143732 Msa0612660:five_prime_UTR
CTAAATACTTGGACAGGCGC+AGG 0.533981 4_2:+61149044 Msa0612660:CDS
GGTGGTGATGTGGAAGAAGA+TGG 0.534065 4_2:+61143569 Msa0612660:five_prime_UTR
TATGAGTAGTGATTCGGAAT+GGG 0.535163 4_2:+61145391 Msa0612660:CDS
CCTTGTTAACTCTTGTATTG+GGG 0.535470 4_2:+61146228 Msa0612660:CDS
TAAGGGTAAATATTTGAAGA+GGG 0.535778 4_2:-61143639 None:intergenic
AGGATAATAGGAACCAATCA+AGG 0.536133 4_2:-61144891 None:intergenic
CTGGAACTCCGTATCATGAC+GGG 0.537749 4_2:+61148742 Msa0612660:CDS
GTAGATTGCAACTCATCCGT+TGG 0.540415 4_2:-61147756 None:intergenic
ATCCAAGTGGACAGATGGGA+AGG 0.540935 4_2:+61145585 Msa0612660:CDS
AGTCTCCTAAATACTTGGAC+AGG 0.541227 4_2:+61149038 Msa0612660:CDS
TTAAGGGTAAATATTTGAAG+AGG 0.541400 4_2:-61143640 None:intergenic
GCAGCTTGGTGACTGGTGCA+TGG 0.542630 4_2:+61146114 Msa0612660:CDS
TGGAGAGACAATCAAGATGA+AGG 0.543990 4_2:+61145944 Msa0612660:CDS
AGCATATTCCAAACACTTGG+TGG 0.546181 4_2:+61147621 Msa0612660:CDS
TCAGGTTTATTTGGTACCAA+GGG 0.546527 4_2:-61144401 None:intergenic
TTCACAGCAAGTAGGCAAAA+GGG 0.546802 4_2:-61144315 None:intergenic
CATATAAATTAGGATTTAAG+CGG 0.547126 4_2:-61148995 None:intergenic
CTTGGAAAATGTTAAAGGAA+AGG 0.549568 4_2:+61145634 Msa0612660:CDS
GTAACTAAGGGGCCATGGCT+CGG 0.550278 4_2:+61145719 Msa0612660:CDS
TGCTGGTCCAACCATTTCAA+AGG 0.550903 4_2:+61143749 Msa0612660:five_prime_UTR
TTGGTTCCTATTATCCTGGC+GGG 0.551717 4_2:+61144897 Msa0612660:five_prime_UTR
GGATGCTATGAGTAGTGATT+CGG 0.552865 4_2:+61145385 Msa0612660:CDS
CAGGTTCAATAGAAATGATG+TGG 0.553380 4_2:+61144283 Msa0612660:intron
TTGCAGCTCAACAAACTGAC+TGG 0.554166 4_2:-61149590 None:intergenic
AAGAACAACCCGTCATGATA+CGG 0.555892 4_2:-61148750 None:intergenic
GTGGAGGTGAAATTGGCTAC+TGG 0.556086 4_2:+61146790 Msa0612660:CDS
TTTGGATGGAGACGAAATGG+AGG 0.556480 4_2:+61146522 Msa0612660:CDS
AAGATTCGGTCCATTTCAGA+AGG 0.557165 4_2:+61145689 Msa0612660:CDS
CAGGACTTGTTAAGTGGTGA+TGG 0.557746 4_2:+61147510 Msa0612660:intron
CTATGAGTAGTGATTCGGAA+TGG 0.558640 4_2:+61145390 Msa0612660:CDS
CAATCATCTCTTGAGGAGCA+GGG 0.559511 4_2:-61147137 None:intergenic
GAAGGCGCTTCCATTGGATG+TGG 0.559665 4_2:+61149460 Msa0612660:CDS
TACAACGCTTCTAAATCAGC+AGG 0.560075 4_2:+61145905 Msa0612660:CDS
GTTCAAAGGCCGCTCGAGGA+AGG 0.560557 4_2:-61147578 None:intergenic
TTCTAAGAGTGACTTCTGAA+TGG 0.561818 4_2:-61144633 None:intergenic
CTTTGAGCCCGACCGAGCCA+TGG 0.562374 4_2:-61145731 None:intergenic
TGGTGCACTACAATTCTGGC+GGG 0.562522 4_2:+61148970 Msa0612660:CDS
TCCAGCATATTCCAAACACT+TGG 0.562882 4_2:+61147618 Msa0612660:CDS
CGCAGTGTCCATACTATCCA+GGG 0.563072 4_2:+61145861 Msa0612660:CDS
CCGCGTTCAATCATCTCTTG+AGG 0.564947 4_2:-61147144 None:intergenic
AACATACATGAATAGCAGAA+AGG 0.568486 4_2:-61144492 None:intergenic
TCCAAACCGAATAGTTTGGA+TGG 0.569256 4_2:+61146508 Msa0612660:CDS
GTTACTGTATTGTTTGACGA+TGG 0.570953 4_2:+61145767 Msa0612660:CDS
TTATCCTGATAAGAAAGAGT+TGG 0.570964 4_2:+61147704 Msa0612660:CDS
ACTCATAGTAAGACTTCGTG+TGG 0.579194 4_2:-61146173 None:intergenic
TCGCAGGGTAGCTTGTTGGA+AGG 0.579936 4_2:-61144734 None:intergenic
AGCATACTGTAAAGGTACAA+TGG 0.580129 4_2:+61146470 Msa0612660:CDS
CTGCATTGAACCACATCCAA+CGG 0.580334 4_2:+61147740 Msa0612660:CDS
CAAGGACTCCAAAGTGCCAA+AGG 0.580574 4_2:-61144873 None:intergenic
CTATCCAGGGCAGAGAGTAA+AGG 0.580957 4_2:+61145874 Msa0612660:CDS
GGACCAGCATAAGCTAGTAA+AGG 0.580984 4_2:-61143735 None:intergenic
CTGTTGCTTTCTAAAGAAAG+CGG 0.581297 4_2:-61147834 None:intergenic
ACAAGAGGGTGTAAGAGTCA+GGG 0.584173 4_2:+61146199 Msa0612660:CDS
TCTATTACGAAAGCCACCTA+AGG 0.585580 4_2:+61149259 Msa0612660:CDS
TCCAAAGCTTGGTGGTGATG+TGG 0.586921 4_2:+61143559 Msa0612660:five_prime_UTR
TCAGATCCAAGTGGACAGAT+GGG 0.587594 4_2:+61145581 Msa0612660:CDS
ATTATGTAACTAAGGGGCCA+TGG 0.589006 4_2:+61145714 Msa0612660:CDS
TGCGAAGGAGCATACTGTAA+AGG 0.590233 4_2:+61146462 Msa0612660:CDS
AACTGAACATGAAAACCAGA+AGG 0.591244 4_2:+61149486 Msa0612660:CDS
GCAATGGTTCCAAAGCTTGG+TGG 0.593236 4_2:+61143551 Msa0612660:five_prime_UTR
GCTCCTTCGCATCCACACAT+TGG 0.595521 4_2:-61146450 None:intergenic
AGGAGATTTGTCCAGTACAC+AGG 0.595632 4_2:-61144523 None:intergenic
AGATTTGCCTCCAGAATAGG+TGG 0.597750 4_2:-61144658 None:intergenic
CAGTGACAGCAGCAGTAGTG+AGG 0.599348 4_2:+61145421 Msa0612660:CDS
TGTTATAGAAAGTTGTTCTG+AGG 0.599468 4_2:+61147881 Msa0612660:CDS
AGTCTACCTTCTGATAAGAA+GGG 0.599826 4_2:+61147168 Msa0612660:CDS
CAGGCGCAGGCTCTGAAGTG+TGG 0.599880 4_2:+61149057 Msa0612660:CDS
AGAGTGTCTCCTCCTTGCAA+TGG 0.603740 4_2:+61143535 Msa0612660:five_prime_UTR
TAACAGTGCCAACACAGCGC+AGG 0.604202 4_2:-61146747 None:intergenic
TGGTTTCAAAGATGGTGATG+TGG 0.607004 4_2:+61146771 Msa0612660:CDS
ACCTTCTGATAAGAAGGGAA+AGG 0.610683 4_2:+61147173 Msa0612660:CDS
TACTACCTGAATCCAACCAA+AGG 0.610754 4_2:-61144567 None:intergenic
CTGTCCACTTGGATCTGACA+CGG 0.610789 4_2:-61145576 None:intergenic
AAAAGTTCAAAGGCCGCTCG+AGG 0.610806 4_2:-61147582 None:intergenic
TACCCGGAAGACTTCTCTCA+AGG 0.612300 4_2:-61148066 None:intergenic
GGCTACTGGTTTCACAACCA+AGG 0.613861 4_2:+61146804 Msa0612660:CDS
TTGGAATCTTGCCAGCATGG+TGG 0.615083 4_2:-61146052 None:intergenic
AAATCAGCAGGATGGCTATG+TGG 0.615349 4_2:+61145917 Msa0612660:CDS
CAAGCTTTGGAACCATTGCA+AGG 0.617014 4_2:-61143547 None:intergenic
TTCGGATAGCAATTTGACTG+TGG 0.617830 4_2:+61146024 Msa0612660:CDS
ACTGGAACTCCGTATCATGA+CGG 0.617936 4_2:+61148741 Msa0612660:CDS
GGTGGTTCGTTAGGATACTC+CGG 0.623296 4_2:-61148792 None:intergenic
ACTGAACATGAAAACCAGAA+GGG 0.628542 4_2:+61149487 Msa0612660:CDS
AGATAGTTACAAGATGCCAA+AGG 0.629388 4_2:-61144681 None:intergenic
TGTCCAATGTGTGGATGCGA+AGG 0.629958 4_2:+61146447 Msa0612660:CDS
CTGAACATGAAAACCAGAAG+GGG 0.630377 4_2:+61149488 Msa0612660:CDS
AATCATCTCTTGAGGAGCAG+GGG 0.631754 4_2:-61147136 None:intergenic
ACATAGATTTGGCTGTGACA+AGG 0.632266 4_2:-61149232 None:intergenic
GTGTGTTTATAACATTCACT+GGG 0.634130 4_2:-61146342 None:intergenic
ATGGTGCACTACAATTCTGG+CGG 0.635699 4_2:+61148969 Msa0612660:CDS
GGTGATGTGGAAGAAGATGG+TGG 0.636328 4_2:+61143572 Msa0612660:five_prime_UTR
TCCAAGTGGACAGATGGGAA+GGG 0.638169 4_2:+61145586 Msa0612660:CDS
ATTGGTTCCTATTATCCTGG+CGG 0.639563 4_2:+61144896 Msa0612660:five_prime_UTR
TGGGTGCTCAACTAGTTCGT+AGG 0.642489 4_2:-61146557 None:intergenic
AGCGCAGGTAACAGTCATCA+GGG 0.642525 4_2:-61146732 None:intergenic
AAGAACTTGAAGAATAGTGG+AGG 0.645772 4_2:-61149090 None:intergenic
CATTTCAAATTTAGGCACTG+AGG 0.648291 4_2:-61147667 None:intergenic
TTTCGGATTGATAAACACGA+AGG 0.649683 4_2:+61147102 Msa0612660:CDS
GTGCATGGTTGCAGACCAAG+AGG 0.653228 4_2:+61146129 Msa0612660:CDS
CAACAAATAGGTAGAGCTGA+GGG 0.656761 4_2:+61149173 Msa0612660:CDS
CTCATAGTAAGACTTCGTGT+GGG 0.656951 4_2:-61146172 None:intergenic
GGTTCGTTAGGATACTCCGG+AGG 0.659291 4_2:-61148789 None:intergenic
TAGAACTCCACCTATTCTGG+AGG 0.661305 4_2:+61144651 Msa0612660:five_prime_UTR
TGGTGATATTATGTTCAAGG+CGG 0.662885 4_2:+61146597 Msa0612660:CDS
AAAAGGCTTCTACAAGCTTG+GGG 0.663581 4_2:-61149549 None:intergenic
CTTACTATGAGTATGACAAG+AGG 0.669246 4_2:+61146184 Msa0612660:CDS
ATGGGGTGTTGTCCAATGTG+TGG 0.669989 4_2:+61146438 Msa0612660:CDS
CCAACAAATAGGTAGAGCTG+AGG 0.673085 4_2:+61149172 Msa0612660:CDS
TTACTATGAGTATGACAAGA+GGG 0.674623 4_2:+61146185 Msa0612660:CDS
TATTTGAAGAGGGAAGAGGT+AGG 0.677144 4_2:-61143629 None:intergenic
GGGTAATGACATGAATGCGG+AGG 0.681615 4_2:+61146666 Msa0612660:CDS
CTAGTCGAGATAATCTTTCG+GGG 0.682837 4_2:+61144961 Msa0612660:five_prime_UTR
TTTCAAAGATGGTGATGTGG+AGG 0.685458 4_2:+61146774 Msa0612660:CDS
ACGCTTCTAAATCAGCAGGA+TGG 0.687059 4_2:+61145909 Msa0612660:CDS
GTCGGGTAATGACATGAATG+CGG 0.687237 4_2:+61146663 Msa0612660:CDS
CCTCAAGAGATGATTGAACG+CGG 0.691236 4_2:+61147144 Msa0612660:CDS
GTGTGAAAAGCACGACAACA+CGG 0.692670 4_2:-61146083 None:intergenic
AAGCCTGGCAGTAAAAGATG+GGG 0.699162 4_2:+61146421 Msa0612660:CDS
AAGGTGATTATGTAACTAAG+GGG 0.699693 4_2:+61145708 Msa0612660:CDS
GTTCGTTAGGATACTCCGGA+GGG 0.719877 4_2:-61148788 None:intergenic
TGCTCCGTGTCAGATCCAAG+TGG 0.720832 4_2:+61145572 Msa0612660:CDS
GCTTTGGAACCATTGCAAGG+AGG 0.722127 4_2:-61143544 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTGAAAATGAATT+TGG - chr4_2:61147374-61147393 None:intergenic 10.0%
!!! AAATTAATCTTTGAAAAAAA+CGG - chr4_2:61147431-61147450 None:intergenic 10.0%
!! TAATTTCATCTTTATTATTT+AGG - chr4_2:61148343-61148362 None:intergenic 10.0%
!! TTGAAAAATATAAACAAAAT+TGG + chr4_2:61148395-61148414 Msa0612660:intron 10.0%
!!! TGGTAATATTTTATAAGATA+AGG - chr4_2:61144616-61144635 None:intergenic 15.0%
!!! TTTTTTTGTCTATTTTTTCT+CGG - chr4_2:61144762-61144781 None:intergenic 15.0%
!!! TTCATTTTCAATTTTAAATG+AGG + chr4_2:61147376-61147395 Msa0612660:intron 15.0%
!!! TTTGATTTATAGGTAAAAAA+AGG + chr4_2:61148010-61148029 Msa0612660:intron 15.0%
!! AGAAATAAGTATATAAAACA+GGG - chr4_2:61148122-61148141 None:intergenic 15.0%
!! AAAAATATAAACAAAATTGG+TGG + chr4_2:61148398-61148417 Msa0612660:intron 15.0%
!! ATTTGATATACTAATGAAAA+TGG + chr4_2:61148577-61148596 Msa0612660:intron 15.0%
!!! AAAATAAACCTTATTTTCAT+GGG - chr4_2:61149315-61149334 None:intergenic 15.0%
!! TCTAACATAATCATCTTATA+TGG - chr4_2:61143926-61143945 None:intergenic 20.0%
!!! AATCTTTTTCATGAAAATTG+TGG + chr4_2:61144146-61144165 Msa0612660:intron 20.0%
!!! TTAATTTGTTCTTTTGTTTC+AGG + chr4_2:61144264-61144283 Msa0612660:intron 20.0%
!! ATGAACATTAGAAGTAAATA+AGG - chr4_2:61145154-61145173 None:intergenic 20.0%
!! CATATCATCAATTTCAAATA+AGG + chr4_2:61145215-61145234 Msa0612660:intron 20.0%
!!! GAAGAAATTGATTTTCAATA+TGG + chr4_2:61145449-61145468 Msa0612660:CDS 20.0%
!! GGTATTAAAAAATGTAAACT+CGG + chr4_2:61145655-61145674 Msa0612660:CDS 20.0%
!!! ATTGGGGAATTTTTTATAAT+TGG + chr4_2:61146244-61146263 Msa0612660:CDS 20.0%
!!! TTGGGGAATTTTTTATAATT+GGG + chr4_2:61146245-61146264 Msa0612660:CDS 20.0%
!!! TTATAAACACACATGAATTT+TGG + chr4_2:61146353-61146372 Msa0612660:CDS 20.0%
!! ACTATATTTACAGAAAATCA+TGG - chr4_2:61146834-61146853 None:intergenic 20.0%
!! TAGAAAATAAGATACAACAT+TGG - chr4_2:61146992-61147011 None:intergenic 20.0%
!! TAGAGAAAATGTACTAATAT+AGG + chr4_2:61147343-61147362 Msa0612660:intron 20.0%
!! TCATTATCCATTTCAAATTT+AGG - chr4_2:61147678-61147697 None:intergenic 20.0%
!! ATTTATAGGTAAAAAAAGGT+TGG + chr4_2:61148014-61148033 Msa0612660:intron 20.0%
!! TTTATAGGTAAAAAAAGGTT+GGG + chr4_2:61148015-61148034 Msa0612660:intron 20.0%
!! GAGAAATAAGTATATAAAAC+AGG - chr4_2:61148123-61148142 None:intergenic 20.0%
!!! AATGGATTTCCTTTTTAAAA+TGG - chr4_2:61148247-61148266 None:intergenic 20.0%
!! TTTCCAGATAAAATCTTAAA+TGG - chr4_2:61148525-61148544 None:intergenic 20.0%
!! ATATCAAATAATTAACGCTT+AGG - chr4_2:61148566-61148585 None:intergenic 20.0%
!! CATATAAATTAGGATTTAAG+CGG - chr4_2:61148998-61149017 None:intergenic 20.0%
!! AATCCTAATTTATATGAATC+AGG + chr4_2:61149002-61149021 Msa0612660:CDS 20.0%
!! ATCCTAATTTATATGAATCA+GGG + chr4_2:61149003-61149022 Msa0612660:CDS 20.0%
!! TAATAGATACAACATAGATT+TGG - chr4_2:61149246-61149265 None:intergenic 20.0%
!!! CAAAATAAACCTTATTTTCA+TGG - chr4_2:61149316-61149335 None:intergenic 20.0%
! CTTACACTTACTCATAAATA+GGG - chr4_2:61143466-61143485 None:intergenic 25.0%
! TCTTACACTTACTCATAAAT+AGG - chr4_2:61143467-61143486 None:intergenic 25.0%
! TATGAGTAAGTGTAAGAAAA+AGG + chr4_2:61143470-61143489 Msa0612660:five_prime_UTR 25.0%
! TAAGGGTAAATATTTGAAGA+GGG - chr4_2:61143642-61143661 None:intergenic 25.0%
! TTAAGGGTAAATATTTGAAG+AGG - chr4_2:61143643-61143662 None:intergenic 25.0%
! ATTTACCCTTAACAAATTCT+TGG + chr4_2:61143651-61143670 Msa0612660:five_prime_UTR 25.0%
!!! AACTACCAAGAATTTGTTAA+GGG - chr4_2:61143659-61143678 None:intergenic 25.0%
!!! AAACTACCAAGAATTTGTTA+AGG - chr4_2:61143660-61143679 None:intergenic 25.0%
!! TATGATATACACCTTTGAAA+TGG - chr4_2:61143763-61143782 None:intergenic 25.0%
!! TTTCAAAGGTGTATATCATA+TGG + chr4_2:61143763-61143782 Msa0612660:intron 25.0%
!!! ATCCTGTTTTCTTTTAACTT+TGG + chr4_2:61143814-61143833 Msa0612660:intron 25.0%
! AACCAAAGTTAAAAGAAAAC+AGG - chr4_2:61143819-61143838 None:intergenic 25.0%
! ATTCTTTCTAATGCTATGTA+TGG + chr4_2:61143861-61143880 Msa0612660:intron 25.0%
! TAAGATGATTATGTTAGAAG+AGG + chr4_2:61143928-61143947 Msa0612660:intron 25.0%
!! CTTTAGATTTTATTCAACCT+TGG - chr4_2:61143970-61143989 None:intergenic 25.0%
! CAAGGTTGAATAAAATCTAA+AGG + chr4_2:61143968-61143987 Msa0612660:intron 25.0%
!!! AAAATCTAAAGGCATGTTTT+TGG + chr4_2:61143979-61143998 Msa0612660:intron 25.0%
!!! AAATCTAAAGGCATGTTTTT+GGG + chr4_2:61143980-61143999 Msa0612660:intron 25.0%
!!! TCCTTTTTCATATATCAACT+AGG + chr4_2:61144099-61144118 Msa0612660:intron 25.0%
!!! CCTTTTTCATATATCAACTA+GGG + chr4_2:61144100-61144119 Msa0612660:intron 25.0%
!! CAGAATATATTTCTGTTGAA+TGG + chr4_2:61144346-61144365 Msa0612660:five_prime_UTR 25.0%
! AGAATGGTCAATATTTAATC+AGG - chr4_2:61144381-61144400 None:intergenic 25.0%
! AATTCTCTATCAGGTTTATT+TGG - chr4_2:61144413-61144432 None:intergenic 25.0%
!! TAAACCTGATAGAGAATTTT+AGG + chr4_2:61144415-61144434 Msa0612660:five_prime_UTR 25.0%
! TGAAATATTTCATTCGCAAT+TGG + chr4_2:61144842-61144861 Msa0612660:five_prime_UTR 25.0%
! GAAATATTTCATTCGCAATT+GGG + chr4_2:61144843-61144862 Msa0612660:five_prime_UTR 25.0%
!! TGATATGCATAGTTTAGAAT+GGG - chr4_2:61145202-61145221 None:intergenic 25.0%
! ATGATATGCATAGTTTAGAA+TGG - chr4_2:61145203-61145222 None:intergenic 25.0%
! TAGTATCAAAATATTGTGAC+AGG + chr4_2:61145350-61145369 Msa0612660:intron 25.0%
!!! GAAATTGATTTTCAATATGG+TGG + chr4_2:61145452-61145471 Msa0612660:CDS 25.0%
!! TAAAACCTTTTCTCTTTCTA+AGG - chr4_2:61145813-61145832 None:intergenic 25.0%
! CATAATATCACCAAAAAAAC+AGG - chr4_2:61146590-61146609 None:intergenic 25.0%
!!! TTTTGGTGATATTATGTTCA+AGG + chr4_2:61146594-61146613 Msa0612660:CDS 25.0%
! TGATAAAGATACAGAAAAGT+CGG + chr4_2:61146645-61146664 Msa0612660:CDS 25.0%
!! AGTCATCTTGATAATTCATT+TGG - chr4_2:61146711-61146730 None:intergenic 25.0%
! GTAACATAATATTAGAACCA+TGG + chr4_2:61146909-61146928 Msa0612660:intron 25.0%
!!! TGATATTTGTTTTTCCAAAC+AGG + chr4_2:61147062-61147081 Msa0612660:intron 25.0%
! TCAATCCGAAAAATTTCATA+AGG - chr4_2:61147093-61147112 None:intergenic 25.0%
!! TCTTTGAAAAAAACGGATTT+AGG - chr4_2:61147424-61147443 None:intergenic 25.0%
! CATCACATTCAGTTTATATT+GGG - chr4_2:61147481-61147500 None:intergenic 25.0%
! ACATCACATTCAGTTTATAT+TGG - chr4_2:61147482-61147501 None:intergenic 25.0%
! AATACTGGAAAAAAGTTCAA+AGG - chr4_2:61147595-61147614 None:intergenic 25.0%
! TACTACGTTGATATATTAGT+AGG + chr4_2:61147975-61147994 Msa0612660:intron 25.0%
! TTGATATATTAGTAGGCTAA+CGG + chr4_2:61147982-61148001 Msa0612660:intron 25.0%
!!! AACGGTTTTCTTTGATTTAT+AGG + chr4_2:61148000-61148019 Msa0612660:intron 25.0%
! ATATACATTCTCACTCAAAA+TGG - chr4_2:61148265-61148284 None:intergenic 25.0%
!!! ATTTTGAGTGAGAATGTATA+TGG + chr4_2:61148264-61148283 Msa0612660:intron 25.0%
!!! TAGAAACCAGAATTTGATTT+TGG + chr4_2:61148361-61148380 Msa0612660:intron 25.0%
!!! AGAAACCAGAATTTGATTTT+GGG + chr4_2:61148362-61148381 Msa0612660:intron 25.0%
!!! AATTTGATTTTGGGGATATT+AGG + chr4_2:61148371-61148390 Msa0612660:intron 25.0%
! TTCCCTGATTCATATAAATT+AGG - chr4_2:61149008-61149027 None:intergenic 25.0%
!!! ACACTCTTTTTGAAATGCTA+AGG - chr4_2:61143522-61143541 None:intergenic 30.0%
TAAATATTTGAAGAGGGAAG+AGG - chr4_2:61143636-61143655 None:intergenic 30.0%
! AGCAAATAATGGAGTTTCTT+TGG + chr4_2:61143706-61143725 Msa0612660:five_prime_UTR 30.0%
!! ATATACACCTTTGAAATGGT+TGG - chr4_2:61143759-61143778 None:intergenic 30.0%
AAAACAGGATAAATTTGCAG+TGG - chr4_2:61143804-61143823 None:intergenic 30.0%
TTCTAATGCTATGTATGGTT+TGG + chr4_2:61143866-61143885 Msa0612660:intron 30.0%
GTGATTTCATAAGAATTCCA+AGG + chr4_2:61143950-61143969 Msa0612660:intron 30.0%
!! CACAACTTTGTTGCTTTAAT+TGG - chr4_2:61144015-61144034 None:intergenic 30.0%
GATATATGAAAAAGGACAGA+GGG - chr4_2:61144095-61144114 None:intergenic 30.0%
TGATATATGAAAAAGGACAG+AGG - chr4_2:61144096-61144115 None:intergenic 30.0%
! CCCTAGTTGATATATGAAAA+AGG - chr4_2:61144103-61144122 None:intergenic 30.0%
CATCATTGTGAAGAACTAAT+AGG - chr4_2:61144181-61144200 None:intergenic 30.0%
AAAGCCTAAAATTCTCTATC+AGG - chr4_2:61144422-61144441 None:intergenic 30.0%
AACATACATGAATAGCAGAA+AGG - chr4_2:61144495-61144514 None:intergenic 30.0%
AAAAGTTACTGAACTTCCTT+TGG + chr4_2:61144551-61144570 Msa0612660:five_prime_UTR 30.0%
TATGCTGATGATATCTTCAA+TGG - chr4_2:61145060-61145079 None:intergenic 30.0%
GAGCATATTATCAAGTTTAG+AGG + chr4_2:61145484-61145503 Msa0612660:CDS 30.0%
! TTTGAGAGAACTTTTGTTCA+TGG + chr4_2:61145539-61145558 Msa0612660:CDS 30.0%
CTTGGAAAATGTTAAAGGAA+AGG + chr4_2:61145634-61145653 Msa0612660:CDS 30.0%
! TACATAATCACCTTCTGAAA+TGG - chr4_2:61145702-61145721 None:intergenic 30.0%
AGAAGGTGATTATGTAACTA+AGG + chr4_2:61145706-61145725 Msa0612660:CDS 30.0%
GAAGGTGATTATGTAACTAA+GGG + chr4_2:61145707-61145726 Msa0612660:CDS 30.0%
AAGGTGATTATGTAACTAAG+GGG + chr4_2:61145708-61145727 Msa0612660:CDS 30.0%
!! TCTTTCTAAGGCAATGATAT+CGG - chr4_2:61145801-61145820 None:intergenic 30.0%
TTACTATGAGTATGACAAGA+GGG + chr4_2:61146185-61146204 Msa0612660:CDS 30.0%
AACCTTGTTAACTCTTGTAT+TGG + chr4_2:61146226-61146245 Msa0612660:CDS 30.0%
ACCTTGTTAACTCTTGTATT+GGG + chr4_2:61146227-61146246 Msa0612660:CDS 30.0%
CAAAATGGTGAACATAGTTT+GGG + chr4_2:61146298-61146317 Msa0612660:CDS 30.0%
GTGTGTTTATAACATTCACT+GGG - chr4_2:61146345-61146364 None:intergenic 30.0%
TGTGTGTTTATAACATTCAC+TGG - chr4_2:61146346-61146365 None:intergenic 30.0%
CAAAAAAACAGGAGTAATCT+GGG - chr4_2:61146579-61146598 None:intergenic 30.0%
TTTCTGTATCTTTATCAGCT+TGG - chr4_2:61146642-61146661 None:intergenic 30.0%
GATAAAGATACAGAAAAGTC+GGG + chr4_2:61146646-61146665 Msa0612660:CDS 30.0%
!! ACTGTTATTGGTTTCAAAGA+TGG + chr4_2:61146763-61146782 Msa0612660:CDS 30.0%
ATCCATACTTTGACTATATG+TGG - chr4_2:61146877-61146896 None:intergenic 30.0%
TAGTCAAAGTATGGATTTGA+TGG + chr4_2:61146881-61146900 Msa0612660:intron 30.0%
! AAGTATGGATTTGATGGTAA+TGG + chr4_2:61146887-61146906 Msa0612660:intron 30.0%
! TTCCGCCTTATGAAATTTTT+CGG + chr4_2:61147085-61147104 Msa0612660:CDS 30.0%
ATCCGAAAAATTTCATAAGG+CGG - chr4_2:61147090-61147109 None:intergenic 30.0%
GGAAACTATAATCAAAAGAC+AGG + chr4_2:61147310-61147329 Msa0612660:intron 30.0%
GAATGTGATGTTTAATGTTC+AGG + chr4_2:61147491-61147510 Msa0612660:intron 30.0%
TGATGGTAGAAAAGAGAATT+TGG + chr4_2:61147527-61147546 Msa0612660:CDS 30.0%
GAATATGCTGGATTTAATAC+TGG - chr4_2:61147610-61147629 None:intergenic 30.0%
TTATCCTGATAAGAAAGAGT+TGG + chr4_2:61147704-61147723 Msa0612660:CDS 30.0%
CTTCATATCCAGAAGTTATT+AGG + chr4_2:61147790-61147809 Msa0612660:CDS 30.0%
TAACATCAAACTGCTTAAAC+TGG - chr4_2:61147866-61147885 None:intergenic 30.0%
TGTTATAGAAAGTTGTTCTG+AGG + chr4_2:61147881-61147900 Msa0612660:CDS 30.0%
! CTTTTCCCTCATCAAAAAAA+TGG - chr4_2:61147911-61147930 None:intergenic 30.0%
AAAAGAATTGTCAACATTGC+AGG + chr4_2:61147926-61147945 Msa0612660:CDS 30.0%
AAAAAAAGGTTGGGTGAAAA+AGG + chr4_2:61148024-61148043 Msa0612660:CDS 30.0%
TGAAAAAGGTTCAACAAGAA+TGG + chr4_2:61148038-61148057 Msa0612660:CDS 30.0%
AGAAAGAAAGATAATGTACC+CGG - chr4_2:61148085-61148104 None:intergenic 30.0%
ATGATGCTTAAACTCGAATT+AGG + chr4_2:61148179-61148198 Msa0612660:intron 30.0%
!! GTCTCTTAGCCATTTTAAAA+AGG + chr4_2:61148235-61148254 Msa0612660:intron 30.0%
!! GAAACCAGAATTTGATTTTG+GGG + chr4_2:61148363-61148382 Msa0612660:intron 30.0%
ATATCCCCAAAATCAAATTC+TGG - chr4_2:61148370-61148389 None:intergenic 30.0%
! TAAACAAAATTGGTGGTAGT+TGG + chr4_2:61148405-61148424 Msa0612660:intron 30.0%
ATAAAATCTTAAATGGCCCT+CGG - chr4_2:61148518-61148537 None:intergenic 30.0%
AACATAAATAGGGTCTGTTT+GGG - chr4_2:61148670-61148689 None:intergenic 30.0%
CAAACACACGAACATAAATA+GGG - chr4_2:61148680-61148699 None:intergenic 30.0%
TCAAACACACGAACATAAAT+AGG - chr4_2:61148681-61148700 None:intergenic 30.0%
AACTACACTTAAAAGCTTAC+AGG - chr4_2:61148816-61148835 None:intergenic 30.0%
TAAAGTAAGGCTTCTCATTA+AGG - chr4_2:61149136-61149155 None:intergenic 30.0%
! AGATGTGGTAATTTTACCTT+AGG - chr4_2:61149278-61149297 None:intergenic 30.0%
!!! ATAAACCTTATTTTCATGGG+AGG - chr4_2:61149312-61149331 None:intergenic 30.0%
! ACAAGCCAAAAGTATATGTT+TGG - chr4_2:61149428-61149447 None:intergenic 30.0%
ATCAATTCCCTTATCACAAA+AGG - chr4_2:61149569-61149588 None:intergenic 30.0%
TTGAAGCTGACAGCAAATAA+TGG + chr4_2:61143695-61143714 Msa0612660:five_prime_UTR 35.0%
! ATACCTTTACTAGCTTATGC+TGG + chr4_2:61143732-61143751 Msa0612660:five_prime_UTR 35.0%
AGGATAAATTTGCAGTGGAA+GGG - chr4_2:61143799-61143818 None:intergenic 35.0%
!! TTCTAGAAACCAGCTTTGTT+GGG - chr4_2:61144205-61144224 None:intergenic 35.0%
! ATTCTAGAAACCAGCTTTGT+TGG - chr4_2:61144206-61144225 None:intergenic 35.0%
CAGGTTCAATAGAAATGATG+TGG + chr4_2:61144283-61144302 Msa0612660:intron 35.0%
AAATATTGACCATTCTCCCT+TGG + chr4_2:61144385-61144404 Msa0612660:five_prime_UTR 35.0%
TCAGGTTTATTTGGTACCAA+GGG - chr4_2:61144404-61144423 None:intergenic 35.0%
ATCAGGTTTATTTGGTACCA+AGG - chr4_2:61144405-61144424 None:intergenic 35.0%
!! GAATTTTAGGCTTTGTAGTG+CGG + chr4_2:61144428-61144447 Msa0612660:five_prime_UTR 35.0%
!! AATTTTAGGCTTTGTAGTGC+GGG + chr4_2:61144429-61144448 Msa0612660:five_prime_UTR 35.0%
CAAATTTCCTTTGGCAATCT+CGG + chr4_2:61144452-61144471 Msa0612660:five_prime_UTR 35.0%
! AGTTCAGTAACTTTTGCCAA+AGG - chr4_2:61144546-61144565 None:intergenic 35.0%
! TTCTAAGAGTGACTTCTGAA+TGG - chr4_2:61144636-61144655 None:intergenic 35.0%
AGATAGTTACAAGATGCCAA+AGG - chr4_2:61144684-61144703 None:intergenic 35.0%
!!! TATTTTTTCTCGGTTTCGCA+GGG - chr4_2:61144752-61144771 None:intergenic 35.0%
AGGATAATAGGAACCAATCA+AGG - chr4_2:61144894-61144913 None:intergenic 35.0%
! TTGATTGGTTCCTATTATCC+TGG + chr4_2:61144893-61144912 Msa0612660:five_prime_UTR 35.0%
GTCTAGTCGAGATAATCTTT+CGG + chr4_2:61144959-61144978 Msa0612660:five_prime_UTR 35.0%
TCTAGTCGAGATAATCTTTC+GGG + chr4_2:61144960-61144979 Msa0612660:five_prime_UTR 35.0%
! ATGCTTCAATTTGCTTGAGA+AGG + chr4_2:61145111-61145130 Msa0612660:five_prime_UTR 35.0%
TGTGACAGGCATATAATTGA+TGG + chr4_2:61145364-61145383 Msa0612660:intron 35.0%
! TATGAGTAGTGATTCGGAAT+GGG + chr4_2:61145391-61145410 Msa0612660:CDS 35.0%
! TCAAGTTTAGAGGAAAGCAT+TGG + chr4_2:61145494-61145513 Msa0612660:CDS 35.0%
!! CAAGTTTAGAGGAAAGCATT+GGG + chr4_2:61145495-61145514 Msa0612660:CDS 35.0%
!! AACTTTTGTTCATGGTGATG+TGG + chr4_2:61145547-61145566 Msa0612660:CDS 35.0%
!! GACAAGTGTTGATTTGTTTG+TGG + chr4_2:61145610-61145629 Msa0612660:CDS 35.0%
!! TGTTGATTTGTTTGTGGACT+TGG + chr4_2:61145616-61145635 Msa0612660:CDS 35.0%
GTGGACTTGGAAAATGTTAA+AGG + chr4_2:61145629-61145648 Msa0612660:CDS 35.0%
GTTACTGTATTGTTTGACGA+TGG + chr4_2:61145767-61145786 Msa0612660:CDS 35.0%
CATTGCCTTAGAAAGAGAAA+AGG + chr4_2:61145805-61145824 Msa0612660:CDS 35.0%
TCTGGAAATTTACGAGTCAA+TGG - chr4_2:61145836-61145855 None:intergenic 35.0%
CTTACTATGAGTATGACAAG+AGG + chr4_2:61146184-61146203 Msa0612660:CDS 35.0%
CCTTGTTAACTCTTGTATTG+GGG + chr4_2:61146228-61146247 Msa0612660:CDS 35.0%
! AGACCAAAGTTGACATTTTG+TGG + chr4_2:61146275-61146294 Msa0612660:CDS 35.0%
TTGCCACAAAATGTCAACTT+TGG - chr4_2:61146281-61146300 None:intergenic 35.0%
! GTTGACATTTTGTGGCAAAA+TGG + chr4_2:61146283-61146302 Msa0612660:CDS 35.0%
GCAAAATGGTGAACATAGTT+TGG + chr4_2:61146297-61146316 Msa0612660:CDS 35.0%
! TTTTCCAGTACAAACTGATG+AGG - chr4_2:61146379-61146398 None:intergenic 35.0%
CATCAGTTTGTACTGGAAAA+AGG + chr4_2:61146379-61146398 Msa0612660:CDS 35.0%
! AGCATACTGTAAAGGTACAA+TGG + chr4_2:61146470-61146489 Msa0612660:CDS 35.0%
CCAAAAAAACAGGAGTAATC+TGG - chr4_2:61146580-61146599 None:intergenic 35.0%
!!! CCAGATTACTCCTGTTTTTT+TGG + chr4_2:61146577-61146596 Msa0612660:CDS 35.0%
TGGTGATATTATGTTCAAGG+CGG + chr4_2:61146597-61146616 Msa0612660:CDS 35.0%
GTCCACATATAGTCAAAGTA+TGG + chr4_2:61146872-61146891 Msa0612660:intron 35.0%
TTGAATGATCCTACTGAACT+TGG + chr4_2:61146960-61146979 Msa0612660:intron 35.0%
TTTCGGATTGATAAACACGA+AGG + chr4_2:61147102-61147121 Msa0612660:CDS 35.0%
AAGTCTACCTTCTGATAAGA+AGG + chr4_2:61147167-61147186 Msa0612660:CDS 35.0%
AGTCTACCTTCTGATAAGAA+GGG + chr4_2:61147168-61147187 Msa0612660:CDS 35.0%
TTATATTGGGCACATGCATT+TGG - chr4_2:61147468-61147487 None:intergenic 35.0%
!! AATGTTCAGGACTTGTTAAG+TGG + chr4_2:61147504-61147523 Msa0612660:intron 35.0%
! CATTTCAAATTTAGGCACTG+AGG - chr4_2:61147670-61147689 None:intergenic 35.0%
CTCAGTGCCTAAATTTGAAA+TGG + chr4_2:61147668-61147687 Msa0612660:CDS 35.0%
GTTTCCAACTCTTTCTTATC+AGG - chr4_2:61147711-61147730 None:intergenic 35.0%
TCATGGATCCTAATAACTTC+TGG - chr4_2:61147801-61147820 None:intergenic 35.0%
!! CTGTTGCTTTCTAAAGAAAG+CGG - chr4_2:61147837-61147856 None:intergenic 35.0%
!!! GACCACCATTTTTTTGATGA+GGG + chr4_2:61147903-61147922 Msa0612660:CDS 35.0%
TTCCCTCATCAAAAAAATGG+TGG - chr4_2:61147908-61147927 None:intergenic 35.0%
AACGTAGTATGTCACACTAT+AGG - chr4_2:61147964-61147983 None:intergenic 35.0%
TGAGAATGTATATGGCAAGA+TGG + chr4_2:61148272-61148291 Msa0612660:intron 35.0%
TATTATTTAGGCTTGTGCTG+TGG - chr4_2:61148331-61148350 None:intergenic 35.0%
GTGGTAGTTGGAAATAGAAA+TGG + chr4_2:61148417-61148436 Msa0612660:intron 35.0%
!! GGGCCATTTAAGATTTTATC+TGG + chr4_2:61148519-61148538 Msa0612660:intron 35.0%
GAACATAAATAGGGTCTGTT+TGG - chr4_2:61148671-61148690 None:intergenic 35.0%
TCGTGTGTTTGAAGAAAGAA+TGG + chr4_2:61148689-61148708 Msa0612660:CDS 35.0%
CTTTGATATATGTTTCCCTC+CGG + chr4_2:61148773-61148792 Msa0612660:CDS 35.0%
TACACTTAAAAGCTTACAGG+TGG - chr4_2:61148813-61148832 None:intergenic 35.0%
TTCCAGCACCATTGTTTATA+AGG + chr4_2:61148860-61148879 Msa0612660:intron 35.0%
GATCTTTGAACATAAGCGAA+GGG - chr4_2:61148886-61148905 None:intergenic 35.0%
TGATCTTTGAACATAAGCGA+AGG - chr4_2:61148887-61148906 None:intergenic 35.0%
AAGAACTTGAAGAATAGTGG+AGG - chr4_2:61149093-61149112 None:intergenic 35.0%
GAGAAGAACTTGAAGAATAG+TGG - chr4_2:61149096-61149115 None:intergenic 35.0%
TGAGAAGCCTTACTTTAATG+AGG + chr4_2:61149139-61149158 Msa0612660:CDS 35.0%
TAACCAGCCTCATTAAAGTA+AGG - chr4_2:61149149-61149168 None:intergenic 35.0%
! TGTGGTAATTTTACCTTAGG+TGG - chr4_2:61149275-61149294 None:intergenic 35.0%
GAGGAACTAAAGTATAGATG+TGG - chr4_2:61149293-61149312 None:intergenic 35.0%
TAGTTCCTCCCATGAAAATA+AGG + chr4_2:61149304-61149323 Msa0612660:intron 35.0%
GCTTGTAAAGCATATCTTGA+AGG + chr4_2:61149442-61149461 Msa0612660:CDS 35.0%
! TTCAGTTTTTCCACATCCAA+TGG - chr4_2:61149473-61149492 None:intergenic 35.0%
AACTGAACATGAAAACCAGA+AGG + chr4_2:61149486-61149505 Msa0612660:CDS 35.0%
ACTGAACATGAAAACCAGAA+GGG + chr4_2:61149487-61149506 Msa0612660:CDS 35.0%
! TGTAGAAGCCTTTTGTGATA+AGG + chr4_2:61149558-61149577 Msa0612660:CDS 35.0%
! GTAGAAGCCTTTTGTGATAA+GGG + chr4_2:61149559-61149578 Msa0612660:CDS 35.0%
!! GAGGTAGGTGTTGTTCAAAT+AGG - chr4_2:61143617-61143636 None:intergenic 40.0%
TATTTGAAGAGGGAAGAGGT+AGG - chr4_2:61143632-61143651 None:intergenic 40.0%
CAGGATAAATTTGCAGTGGA+AGG - chr4_2:61143800-61143819 None:intergenic 40.0%
! GGTTTGGTACTTGATAGTTG+TGG + chr4_2:61143882-61143901 Msa0612660:intron 40.0%
AAAAAGGACAGAGGGAAACA+AGG - chr4_2:61144087-61144106 None:intergenic 40.0%
CATATATCAACTAGGGACTG+TGG + chr4_2:61144107-61144126 Msa0612660:intron 40.0%
TTCACAGCAAGTAGGCAAAA+GGG - chr4_2:61144318-61144337 None:intergenic 40.0%
ATTCACAGCAAGTAGGCAAA+AGG - chr4_2:61144319-61144338 None:intergenic 40.0%
CTTCTTGATTCACAGCAAGT+AGG - chr4_2:61144326-61144345 None:intergenic 40.0%
TATTTGGTACCAAGGGAGAA+TGG - chr4_2:61144397-61144416 None:intergenic 40.0%
! TTCTTTTCCGAGATTGCCAA+AGG - chr4_2:61144462-61144481 None:intergenic 40.0%
GTTTGAAGATTCCTGTGTAC+TGG + chr4_2:61144512-61144531 Msa0612660:five_prime_UTR 40.0%
TGTACTGGACAAATCTCCTT+TGG + chr4_2:61144527-61144546 Msa0612660:five_prime_UTR 40.0%
GTTACTGAACTTCCTTTGGT+TGG + chr4_2:61144555-61144574 Msa0612660:five_prime_UTR 40.0%
AACTTCCTTTGGTTGGATTC+AGG + chr4_2:61144562-61144581 Msa0612660:five_prime_UTR 40.0%
TACTACCTGAATCCAACCAA+AGG - chr4_2:61144570-61144589 None:intergenic 40.0%
TCTTAGAACTCCACCTATTC+TGG + chr4_2:61144648-61144667 Msa0612660:five_prime_UTR 40.0%
!!! CTATTTTTTCTCGGTTTCGC+AGG - chr4_2:61144753-61144772 None:intergenic 40.0%
! ATTGGTTCCTATTATCCTGG+CGG + chr4_2:61144896-61144915 Msa0612660:five_prime_UTR 40.0%
CTAGTCGAGATAATCTTTCG+GGG + chr4_2:61144961-61144980 Msa0612660:five_prime_UTR 40.0%
TAGCTCTCATTCACTGTACT+TGG + chr4_2:61145270-61145289 Msa0612660:intron 40.0%
TTTCCTCTCTATTGTTGCGT+CGG + chr4_2:61145298-61145317 Msa0612660:intron 40.0%
GGATGCTATGAGTAGTGATT+CGG + chr4_2:61145385-61145404 Msa0612660:CDS 40.0%
! CTATGAGTAGTGATTCGGAA+TGG + chr4_2:61145390-61145409 Msa0612660:CDS 40.0%
CGGACAAACTTTCGAAGATT+CGG + chr4_2:61145675-61145694 Msa0612660:CDS 40.0%
! AAGATTCGGTCCATTTCAGA+AGG + chr4_2:61145689-61145708 Msa0612660:CDS 40.0%
ATTATGTAACTAAGGGGCCA+TGG + chr4_2:61145714-61145733 Msa0612660:CDS 40.0%
!! TGCTGATTTAGAAGCGTTGT+AGG - chr4_2:61145906-61145925 None:intergenic 40.0%
TACAACGCTTCTAAATCAGC+AGG + chr4_2:61145905-61145924 Msa0612660:CDS 40.0%
TGGAGAGACAATCAAGATGA+AGG + chr4_2:61145944-61145963 Msa0612660:CDS 40.0%
!! CAAGTTTGGTGTGTGTTAAC+TGG + chr4_2:61145987-61146006 Msa0612660:CDS 40.0%
TTCGGATAGCAATTTGACTG+TGG + chr4_2:61146024-61146043 Msa0612660:CDS 40.0%
!!! TTTTTGGAATCTTGCCAGCA+TGG - chr4_2:61146058-61146077 None:intergenic 40.0%
CTCATAGTAAGACTTCGTGT+GGG - chr4_2:61146175-61146194 None:intergenic 40.0%
ACTCATAGTAAGACTTCGTG+TGG - chr4_2:61146176-61146195 None:intergenic 40.0%
CCCCAATACAAGAGTTAACA+AGG - chr4_2:61146231-61146250 None:intergenic 40.0%
TTAAGCCTGGCAGTAAAAGA+TGG + chr4_2:61146419-61146438 Msa0612660:CDS 40.0%
TAAGCCTGGCAGTAAAAGAT+GGG + chr4_2:61146420-61146439 Msa0612660:CDS 40.0%
!! CAAACTATTCGGTTTGGACA+TGG - chr4_2:61146506-61146525 None:intergenic 40.0%
CATGTCCAAACCGAATAGTT+TGG + chr4_2:61146504-61146523 Msa0612660:CDS 40.0%
TCCAAACCGAATAGTTTGGA+TGG + chr4_2:61146508-61146527 Msa0612660:CDS 40.0%
TCCATCCAAACTATTCGGTT+TGG - chr4_2:61146512-61146531 None:intergenic 40.0%
TCGTCTCCATCCAAACTATT+CGG - chr4_2:61146517-61146536 None:intergenic 40.0%
TAGTTTGGATGGAGACGAAA+TGG + chr4_2:61146519-61146538 Msa0612660:CDS 40.0%
! TGGTTTCAAAGATGGTGATG+TGG + chr4_2:61146771-61146790 Msa0612660:CDS 40.0%
! TTTCAAAGATGGTGATGTGG+AGG + chr4_2:61146774-61146793 Msa0612660:CDS 40.0%
CAGAAAATCATGGCATACCT+TGG - chr4_2:61146824-61146843 None:intergenic 40.0%
AATACGCAATGCAAGTTCCA+TGG - chr4_2:61146929-61146948 None:intergenic 40.0%
ACCTTCTGATAAGAAGGGAA+AGG + chr4_2:61147173-61147192 Msa0612660:CDS 40.0%
ACCTTTCCCTTCTTATCAGA+AGG - chr4_2:61147177-61147196 None:intergenic 40.0%
CAGACATAGAAATCTCAGCT+TGG + chr4_2:61147289-61147308 Msa0612660:intron 40.0%
TCCAGCATATTCCAAACACT+TGG + chr4_2:61147618-61147637 Msa0612660:CDS 40.0%
! ACCAAGTGTTTGGAATATGC+TGG - chr4_2:61147622-61147641 None:intergenic 40.0%
AGCATATTCCAAACACTTGG+TGG + chr4_2:61147621-61147640 Msa0612660:CDS 40.0%
TGAGGAAAATGCTCCTGAAA+TGG - chr4_2:61147652-61147671 None:intergenic 40.0%
GCGGAAAATCATTCTTGTCA+TGG - chr4_2:61147818-61147837 None:intergenic 40.0%
!!! GGACCACCATTTTTTTGATG+AGG + chr4_2:61147902-61147921 Msa0612660:CDS 40.0%
CAATAACGACTGCTACAGAA+AGG - chr4_2:61148155-61148174 None:intergenic 40.0%
ATGTATATGGCAAGATGGCA+TGG + chr4_2:61148277-61148296 Msa0612660:intron 40.0%
ATGTATGCATGTTTGTACCG+AGG + chr4_2:61148498-61148517 Msa0612660:intron 40.0%
TGTATGCATGTTTGTACCGA+GGG + chr4_2:61148499-61148518 Msa0612660:intron 40.0%
AAGAACAACCCGTCATGATA+CGG - chr4_2:61148753-61148772 None:intergenic 40.0%
ACATCACGTTGACAACATCA+GGG - chr4_2:61148939-61148958 None:intergenic 40.0%
AACATCACGTTGACAACATC+AGG - chr4_2:61148940-61148959 None:intergenic 40.0%
ACGTGATGTTTGAATGCAGA+TGG + chr4_2:61148950-61148969 Msa0612660:intron 40.0%
GTCTGAGTCTCCTAAATACT+TGG + chr4_2:61149033-61149052 Msa0612660:CDS 40.0%
AGTCTCCTAAATACTTGGAC+AGG + chr4_2:61149038-61149057 Msa0612660:CDS 40.0%
TCAAGTTCTTCTCTCTCTAC+AGG + chr4_2:61149103-61149122 Msa0612660:CDS 40.0%
AAGCCTTACTTTAATGAGGC+TGG + chr4_2:61149143-61149162 Msa0612660:CDS 40.0%
GCTGGTTATGACCAACAAAT+AGG + chr4_2:61149161-61149180 Msa0612660:CDS 40.0%
CAACAAATAGGTAGAGCTGA+GGG + chr4_2:61149173-61149192 Msa0612660:CDS 40.0%
ACATAGATTTGGCTGTGACA+AGG - chr4_2:61149235-61149254 None:intergenic 40.0%
TCTATTACGAAAGCCACCTA+AGG + chr4_2:61149259-61149278 Msa0612660:CDS 40.0%
! ATGTCTGATGCAGCATTTTG+AGG + chr4_2:61149372-61149391 Msa0612660:intron 40.0%
! GCGCTCCAAACATATACTTT+TGG + chr4_2:61149420-61149439 Msa0612660:CDS 40.0%
CTGAACATGAAAACCAGAAG+GGG + chr4_2:61149488-61149507 Msa0612660:CDS 40.0%
AAAAGGCTTCTACAAGCTTG+GGG - chr4_2:61149552-61149571 None:intergenic 40.0%
CAAAAGGCTTCTACAAGCTT+GGG - chr4_2:61149553-61149572 None:intergenic 40.0%
ACAAAAGGCTTCTACAAGCT+TGG - chr4_2:61149554-61149573 None:intergenic 40.0%
!! CAAGCTTTGGAACCATTGCA+AGG - chr4_2:61143550-61143569 None:intergenic 45.0%
CTTGCAATGGTTCCAAAGCT+TGG + chr4_2:61143548-61143567 Msa0612660:five_prime_UTR 45.0%
!! GAAGATGGTGGAACTGGAAT+TGG + chr4_2:61143584-61143603 Msa0612660:five_prime_UTR 45.0%
GGACCAGCATAAGCTAGTAA+AGG - chr4_2:61143738-61143757 None:intergenic 45.0%
TGCTGGTCCAACCATTTCAA+AGG + chr4_2:61143749-61143768 Msa0612660:five_prime_UTR 45.0%
CAATGATGTCCCAACAAAGC+TGG + chr4_2:61144193-61144212 Msa0612660:intron 45.0%
TAGTGCGGGCAAATTTCCTT+TGG + chr4_2:61144443-61144462 Msa0612660:five_prime_UTR 45.0%
AGGAGATTTGTCCAGTACAC+AGG - chr4_2:61144526-61144545 None:intergenic 45.0%
TAGAACTCCACCTATTCTGG+AGG + chr4_2:61144651-61144670 Msa0612660:five_prime_UTR 45.0%
AGATTTGCCTCCAGAATAGG+TGG - chr4_2:61144661-61144680 None:intergenic 45.0%
AGGAGATTTGCCTCCAGAAT+AGG - chr4_2:61144664-61144683 None:intergenic 45.0%
! TTCTGGAGGCAAATCTCCTT+TGG + chr4_2:61144665-61144684 Msa0612660:five_prime_UTR 45.0%
GCAATTGGGCATATCTCCTT+TGG + chr4_2:61144857-61144876 Msa0612660:five_prime_UTR 45.0%
GCATATCTCCTTTGGCACTT+TGG + chr4_2:61144865-61144884 Msa0612660:five_prime_UTR 45.0%
TTGGTTCCTATTATCCTGGC+GGG + chr4_2:61144897-61144916 Msa0612660:five_prime_UTR 45.0%
CTTCTTTGGCATCAGATCTC+TGG + chr4_2:61144925-61144944 Msa0612660:five_prime_UTR 45.0%
TCAGATCCAAGTGGACAGAT+GGG + chr4_2:61145581-61145600 Msa0612660:CDS 45.0%
TATGGACACTGCGAATCTTC+TGG - chr4_2:61145854-61145873 None:intergenic 45.0%
TTAACCTTTACTCTCTGCCC+TGG - chr4_2:61145881-61145900 None:intergenic 45.0%
ACGCTTCTAAATCAGCAGGA+TGG + chr4_2:61145909-61145928 Msa0612660:CDS 45.0%
AAATCAGCAGGATGGCTATG+TGG + chr4_2:61145917-61145936 Msa0612660:CDS 45.0%
TTGTGCTGTCGATGCAAGTT+TGG + chr4_2:61145973-61145992 Msa0612660:CDS 45.0%
! GTGTGAAAAGCACGACAACA+CGG - chr4_2:61146086-61146105 None:intergenic 45.0%
GTTGAACAGTCTGTTCCTCT+TGG - chr4_2:61146147-61146166 None:intergenic 45.0%
! ACAAGAGGGTGTAAGAGTCA+GGG + chr4_2:61146199-61146218 Msa0612660:CDS 45.0%
TTCACTGGGAGTAAACTCTC+TGG - chr4_2:61146331-61146350 None:intergenic 45.0%
TTGGCCTCATCAGTTTGTAC+TGG + chr4_2:61146372-61146391 Msa0612660:CDS 45.0%
TCTTACGATCCTCTTAAGCC+TGG + chr4_2:61146406-61146425 Msa0612660:CDS 45.0%
! CTTTTACTGCCAGGCTTAAG+AGG - chr4_2:61146418-61146437 None:intergenic 45.0%
AAGCCTGGCAGTAAAAGATG+GGG + chr4_2:61146421-61146440 Msa0612660:CDS 45.0%
! TGCGAAGGAGCATACTGTAA+AGG + chr4_2:61146462-61146481 Msa0612660:CDS 45.0%
TTTGGATGGAGACGAAATGG+AGG + chr4_2:61146522-61146541 Msa0612660:CDS 45.0%
AAGGCGGCTCAAAAACAGTT+TGG + chr4_2:61146613-61146632 Msa0612660:CDS 45.0%
GTCGGGTAATGACATGAATG+CGG + chr4_2:61146663-61146682 Msa0612660:CDS 45.0%
CGGAGGCTGCTCTTAAAAAT+GGG + chr4_2:61146683-61146702 Msa0612660:CDS 45.0%
! TGGTGATGTGGAGGTGAAAT+TGG + chr4_2:61146783-61146802 Msa0612660:CDS 45.0%
TTCATAAGGCGGAACCTGTT+TGG - chr4_2:61147079-61147098 None:intergenic 45.0%
AATCATCTCTTGAGGAGCAG+GGG - chr4_2:61147139-61147158 None:intergenic 45.0%
CAATCATCTCTTGAGGAGCA+GGG - chr4_2:61147140-61147159 None:intergenic 45.0%
TCAATCATCTCTTGAGGAGC+AGG - chr4_2:61147141-61147160 None:intergenic 45.0%
CCTCAAGAGATGATTGAACG+CGG + chr4_2:61147144-61147163 Msa0612660:CDS 45.0%
!! CAGGACTTGTTAAGTGGTGA+TGG + chr4_2:61147510-61147529 Msa0612660:intron 45.0%
! TTCCTTTTTCCTTCCTCGAG+CGG + chr4_2:61147569-61147588 Msa0612660:CDS 45.0%
TGGAAGTTCCACCAAGTGTT+TGG - chr4_2:61147632-61147651 None:intergenic 45.0%
CTTGGTGGAACTTCCATTTC+AGG + chr4_2:61147636-61147655 Msa0612660:CDS 45.0%
CTGCATTGAACCACATCCAA+CGG + chr4_2:61147740-61147759 Msa0612660:CDS 45.0%
GTAGATTGCAACTCATCCGT+TGG - chr4_2:61147759-61147778 None:intergenic 45.0%
CATCCTTGAGAGAAGTCTTC+CGG + chr4_2:61148063-61148082 Msa0612660:CDS 45.0%
ATCCTTGAGAGAAGTCTTCC+GGG + chr4_2:61148064-61148083 Msa0612660:CDS 45.0%
TGCTACAGAAAGGCTTCTCA+TGG - chr4_2:61148145-61148164 None:intergenic 45.0%
CTCATGCGAGCAGTAATTGT+TGG + chr4_2:61148714-61148733 Msa0612660:CDS 45.0%
GCAGTAATTGTTGGTGCAAC+TGG + chr4_2:61148723-61148742 Msa0612660:CDS 45.0%
ACTGGAACTCCGTATCATGA+CGG + chr4_2:61148741-61148760 Msa0612660:CDS 45.0%
AAGCTTACAGGTGGTTCGTT+AGG - chr4_2:61148804-61148823 None:intergenic 45.0%
! GGCCTTATAAACAATGGTGC+TGG - chr4_2:61148865-61148884 None:intergenic 45.0%
! GCGAAGGGCCTTATAAACAA+TGG - chr4_2:61148871-61148890 None:intergenic 45.0%
CAGATGGTGCACTACAATTC+TGG + chr4_2:61148966-61148985 Msa0612660:intron 45.0%
ATGGTGCACTACAATTCTGG+CGG + chr4_2:61148969-61148988 Msa0612660:CDS 45.0%
! TGAAGAATAGTGGAGGTTCC+AGG - chr4_2:61149086-61149105 None:intergenic 45.0%
CCTCAGCTCTACCTATTTGT+TGG - chr4_2:61149175-61149194 None:intergenic 45.0%
CCAACAAATAGGTAGAGCTG+AGG + chr4_2:61149172-61149191 Msa0612660:CDS 45.0%
!! TATCTTGAAGGCGCTTCCAT+TGG + chr4_2:61149454-61149473 Msa0612660:CDS 45.0%
TTGCAGCTCAACAAACTGAC+TGG - chr4_2:61149593-61149612 None:intergenic 45.0%
! AGAGTGTCTCCTCCTTGCAA+TGG + chr4_2:61143535-61143554 Msa0612660:five_prime_UTR 50.0%
!! GCTTTGGAACCATTGCAAGG+AGG - chr4_2:61143547-61143566 None:intergenic 50.0%
GCAATGGTTCCAAAGCTTGG+TGG + chr4_2:61143551-61143570 Msa0612660:five_prime_UTR 50.0%
!! TCCAAAGCTTGGTGGTGATG+TGG + chr4_2:61143559-61143578 Msa0612660:five_prime_UTR 50.0%
TCCACATCACCACCAAGCTT+TGG - chr4_2:61143563-61143582 None:intergenic 50.0%
! GGTGGTGATGTGGAAGAAGA+TGG + chr4_2:61143569-61143588 Msa0612660:five_prime_UTR 50.0%
GGTGATGTGGAAGAAGATGG+TGG + chr4_2:61143572-61143591 Msa0612660:five_prime_UTR 50.0%
!! GTGGAAGAAGATGGTGGAAC+TGG + chr4_2:61143578-61143597 Msa0612660:five_prime_UTR 50.0%
! CAAGGACTCCAAAGTGCCAA+AGG - chr4_2:61144876-61144895 None:intergenic 50.0%
!! GGCACTTTGGAGTCCTTGAT+TGG + chr4_2:61144878-61144897 Msa0612660:five_prime_UTR 50.0%
GATTTGCCCGCCAGGATAAT+AGG - chr4_2:61144906-61144925 None:intergenic 50.0%
ATGCCGACGCAACAATAGAG+AGG - chr4_2:61145304-61145323 None:intergenic 50.0%
CTGTCCACTTGGATCTGACA+CGG - chr4_2:61145579-61145598 None:intergenic 50.0%
GTCAGATCCAAGTGGACAGA+TGG + chr4_2:61145580-61145599 Msa0612660:CDS 50.0%
ATCCAAGTGGACAGATGGGA+AGG + chr4_2:61145585-61145604 Msa0612660:CDS 50.0%
TCCAAGTGGACAGATGGGAA+GGG + chr4_2:61145586-61145605 Msa0612660:CDS 50.0%
TCGCAGTGTCCATACTATCC+AGG + chr4_2:61145860-61145879 Msa0612660:CDS 50.0%
CGCAGTGTCCATACTATCCA+GGG + chr4_2:61145861-61145880 Msa0612660:CDS 50.0%
ACTCTCTGCCCTGGATAGTA+TGG - chr4_2:61145872-61145891 None:intergenic 50.0%
CTATCCAGGGCAGAGAGTAA+AGG + chr4_2:61145874-61145893 Msa0612660:CDS 50.0%
CAGGATGGCTATGTGGAACT+TGG + chr4_2:61145924-61145943 Msa0612660:CDS 50.0%
! CTGGCTCGCTTCTGTTCTTT+CGG + chr4_2:61146006-61146025 Msa0612660:CDS 50.0%
TTGGAATCTTGCCAGCATGG+TGG - chr4_2:61146055-61146074 None:intergenic 50.0%
! CGACAACACGGTCAGGTTTT+TGG - chr4_2:61146074-61146093 None:intergenic 50.0%
! AAAAGCACGACAACACGGTC+AGG - chr4_2:61146081-61146100 None:intergenic 50.0%
! CGTGCTTTTCACACGCAAAC+TGG + chr4_2:61146092-61146111 Msa0612660:CDS 50.0%
! GACAAGAGGGTGTAAGAGTC+AGG + chr4_2:61146198-61146217 Msa0612660:CDS 50.0%
! ACACCCCATCTTTTACTGCC+AGG - chr4_2:61146427-61146446 None:intergenic 50.0%
!! ATGGGGTGTTGTCCAATGTG+TGG + chr4_2:61146438-61146457 Msa0612660:CDS 50.0%
TGTCCAATGTGTGGATGCGA+AGG + chr4_2:61146447-61146466 Msa0612660:CDS 50.0%
TGGGTGCTCAACTAGTTCGT+AGG - chr4_2:61146560-61146579 None:intergenic 50.0%
GGGTAATGACATGAATGCGG+AGG + chr4_2:61146666-61146685 Msa0612660:CDS 50.0%
GCGGAGGCTGCTCTTAAAAA+TGG + chr4_2:61146682-61146701 Msa0612660:CDS 50.0%
AGCGCAGGTAACAGTCATCA+GGG - chr4_2:61146735-61146754 None:intergenic 50.0%
! CGCTGTGTTGGCACTGTTAT+TGG + chr4_2:61146751-61146770 Msa0612660:CDS 50.0%
GTGGAGGTGAAATTGGCTAC+TGG + chr4_2:61146790-61146809 Msa0612660:CDS 50.0%
!! GGCTACTGGTTTCACAACCA+AGG + chr4_2:61146804-61146823 Msa0612660:CDS 50.0%
TGGCGCAATCCAAGTTCAGT+AGG - chr4_2:61146972-61146991 None:intergenic 50.0%
CCGCGTTCAATCATCTCTTG+AGG - chr4_2:61147147-61147166 None:intergenic 50.0%
AAAAGTTCAAAGGCCGCTCG+AGG - chr4_2:61147585-61147604 None:intergenic 50.0%
TGCAACTCATCCGTTGGATG+TGG - chr4_2:61147753-61147772 None:intergenic 50.0%
TACCCGGAAGACTTCTCTCA+AGG - chr4_2:61148069-61148088 None:intergenic 50.0%
TTAGGCTTGTGCTGTGGCAA+TGG - chr4_2:61148325-61148344 None:intergenic 50.0%
CTGGAACTCCGTATCATGAC+GGG + chr4_2:61148742-61148761 Msa0612660:CDS 50.0%
GTTCGTTAGGATACTCCGGA+GGG - chr4_2:61148791-61148810 None:intergenic 50.0%
GGTGGTTCGTTAGGATACTC+CGG - chr4_2:61148795-61148814 None:intergenic 50.0%
TGGTGCACTACAATTCTGGC+GGG + chr4_2:61148970-61148989 Msa0612660:CDS 50.0%
CTGCGCCTGTCCAAGTATTT+AGG - chr4_2:61149046-61149065 None:intergenic 50.0%
CTAAATACTTGGACAGGCGC+AGG + chr4_2:61149044-61149063 Msa0612660:CDS 50.0%
!!! GATGCAGCATTTTGAGGCAC+TGG + chr4_2:61149378-61149397 Msa0612660:intron 50.0%
!! TCGCAGGGTAGCTTGTTGGA+AGG - chr4_2:61144737-61144756 None:intergenic 55.0%
! GGTTTCGCAGGGTAGCTTGT+TGG - chr4_2:61144741-61144760 None:intergenic 55.0%
CCAAAGAAGATTTGCCCGCC+AGG - chr4_2:61144914-61144933 None:intergenic 55.0%
! CCTGGCGGGCAAATCTTCTT+TGG + chr4_2:61144911-61144930 Msa0612660:five_prime_UTR 55.0%
CTCACTACTGCTGCTGTCAC+TGG - chr4_2:61145423-61145442 None:intergenic 55.0%
CAGTGACAGCAGCAGTAGTG+AGG + chr4_2:61145421-61145440 Msa0612660:CDS 55.0%
TGCTCCGTGTCAGATCCAAG+TGG + chr4_2:61145572-61145591 Msa0612660:CDS 55.0%
ACCCTTCCCATCTGTCCACT+TGG - chr4_2:61145590-61145609 None:intergenic 55.0%
GTAACTAAGGGGCCATGGCT+CGG + chr4_2:61145719-61145738 Msa0612660:CDS 55.0%
TCACACGCAAACTGGCAGCT+TGG + chr4_2:61146100-61146119 Msa0612660:CDS 55.0%
! CAAACTGGCAGCTTGGTGAC+TGG + chr4_2:61146107-61146126 Msa0612660:CDS 55.0%
GTGCATGGTTGCAGACCAAG+AGG + chr4_2:61146129-61146148 Msa0612660:CDS 55.0%
GCTCCTTCGCATCCACACAT+TGG - chr4_2:61146453-61146472 None:intergenic 55.0%
CAGCGCAGGTAACAGTCATC+AGG - chr4_2:61146736-61146755 None:intergenic 55.0%
GACTGTTACCTGCGCTGTGT+TGG + chr4_2:61146739-61146758 Msa0612660:CDS 55.0%
TAACAGTGCCAACACAGCGC+AGG - chr4_2:61146750-61146769 None:intergenic 55.0%
AGTCACCGTCACCAGAGACA+CGG + chr4_2:61148212-61148231 Msa0612660:intron 55.0%
GGTTCGTTAGGATACTCCGG+AGG - chr4_2:61148792-61148811 None:intergenic 55.0%
!! GGCTCTGAAGTGTGGAATCC+TGG + chr4_2:61149065-61149084 Msa0612660:CDS 55.0%
!!! GCAGCATTTTGAGGCACTGG+TGG + chr4_2:61149381-61149400 Msa0612660:intron 55.0%
!! GAAGGCGCTTCCATTGGATG+TGG + chr4_2:61149460-61149479 Msa0612660:CDS 55.0%
AACCAGAAGGGGACTTCTGC+AGG + chr4_2:61149499-61149518 Msa0612660:CDS 55.0%
ATCCTGCAGAAGTCCCCTTC+TGG - chr4_2:61149504-61149523 None:intergenic 55.0%
!! ATGGCTCGGTCGGGCTCAAA+GGG + chr4_2:61145733-61145752 Msa0612660:CDS 60.0%
CTGTGGATGCTCCACCATGC+TGG + chr4_2:61146041-61146060 Msa0612660:CDS 60.0%
! GCAGCTTGGTGACTGGTGCA+TGG + chr4_2:61146114-61146133 Msa0612660:CDS 60.0%
GGCCGCTCGAGGAAGGAAAA+AGG - chr4_2:61147574-61147593 None:intergenic 60.0%
GTTCAAAGGCCGCTCGAGGA+AGG - chr4_2:61147581-61147600 None:intergenic 60.0%
GTCACCGTCACCAGAGACAC+GGG + chr4_2:61148213-61148232 Msa0612660:intron 60.0%
GAGACCCGTGTCTCTGGTGA+CGG - chr4_2:61148220-61148239 None:intergenic 60.0%
GGCTAAGAGACCCGTGTCTC+TGG - chr4_2:61148226-61148245 None:intergenic 60.0%
!! CTAAGGGGCCATGGCTCGGT+CGG + chr4_2:61145723-61145742 Msa0612660:CDS 65.0%
!! TAAGGGGCCATGGCTCGGTC+GGG + chr4_2:61145724-61145743 Msa0612660:CDS 65.0%
CTTTGAGCCCGACCGAGCCA+TGG - chr4_2:61145734-61145753 None:intergenic 65.0%
!! CATGGCTCGGTCGGGCTCAA+AGG + chr4_2:61145732-61145751 Msa0612660:CDS 65.0%
CGGTCGGGCTCAAAGGGTTG+TGG + chr4_2:61145739-61145758 Msa0612660:CDS 65.0%
!! CAGGCGCAGGCTCTGAAGTG+TGG + chr4_2:61149057-61149076 Msa0612660:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 61143459 61149630 61143459 ID=Msa0612660;Name=Msa0612660
chr4_2 mRNA 61143459 61149630 61143459 ID=Msa0612660-mRNA-1;Parent=Msa0612660;Name=Msa0612660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1170|1|1|1|0.75|0.66|9|12|912
chr4_2 exon 61143459 61143770 61143459 ID=Msa0612660-mRNA-1:exon:16570;Parent=Msa0612660-mRNA-1
chr4_2 exon 61144286 61145132 61144286 ID=Msa0612660-mRNA-1:exon:16571;Parent=Msa0612660-mRNA-1
chr4_2 exon 61145372 61146825 61145372 ID=Msa0612660-mRNA-1:exon:16572;Parent=Msa0612660-mRNA-1
chr4_2 exon 61147084 61147194 61147084 ID=Msa0612660-mRNA-1:exon:16573;Parent=Msa0612660-mRNA-1
chr4_2 exon 61147513 61147947 61147513 ID=Msa0612660-mRNA-1:exon:16574;Parent=Msa0612660-mRNA-1
chr4_2 exon 61148022 61148085 61148022 ID=Msa0612660-mRNA-1:exon:16575;Parent=Msa0612660-mRNA-1
chr4_2 exon 61148676 61148815 61148676 ID=Msa0612660-mRNA-1:exon:16576;Parent=Msa0612660-mRNA-1
chr4_2 exon 61148969 61149280 61148969 ID=Msa0612660-mRNA-1:exon:16577;Parent=Msa0612660-mRNA-1
chr4_2 exon 61149385 61149630 61149385 ID=Msa0612660-mRNA-1:exon:16578;Parent=Msa0612660-mRNA-1
chr4_2 five_prime_UTR 61143459 61143770 61143459 ID=Msa0612660-mRNA-1:five_prime_utr;Parent=Msa0612660-mRNA-1
chr4_2 five_prime_UTR 61144286 61145132 61144286 ID=Msa0612660-mRNA-1:five_prime_utr;Parent=Msa0612660-mRNA-1
chr4_2 five_prime_UTR 61145372 61145382 61145372 ID=Msa0612660-mRNA-1:five_prime_utr;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61145383 61146825 61145383 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61147084 61147194 61147084 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61147513 61147947 61147513 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61148022 61148085 61148022 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61148676 61148815 61148676 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61148969 61149280 61148969 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 CDS 61149385 61149618 61149385 ID=Msa0612660-mRNA-1:cds;Parent=Msa0612660-mRNA-1
chr4_2 three_prime_UTR 61149619 61149630 61149619 ID=Msa0612660-mRNA-1:three_prime_utr;Parent=Msa0612660-mRNA-1
Gene Sequence

>Msa0612660

ATGGATGCTATGAGTAGTGATTCGGAATGGGAGAGTTCCAGTGACAGCAGCAGTAGTGAGGATCAAGAAGAAATTGATTTTCAATATGGTGGTCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGAACTTTTGTTCATGGTGATGTGGTCTGCTCCGTGTCAGATCCAAGTGGACAGATGGGAAGGGTGACAAGTGTTGATTTGTTTGTGGACTTGGAAAATGTTAAAGGAAAGGTATTAAAAAATGTAAACTCGGACAAACTTTCGAAGATTCGGTCCATTTCAGAAGGTGATTATGTAACTAAGGGGCCATGGCTCGGTCGGGCTCAAAGGGTTGTGGACAAAGTTACTGTATTGTTTGACGATGGAGCTAAATCCGATATCATTGCCTTAGAAAGAGAAAAGGTTTTACCATTGACTCGTAAATTTCCAGAAGATTCGCAGTGTCCATACTATCCAGGGCAGAGAGTAAAGGTTAAGTCCTACAACGCTTCTAAATCAGCAGGATGGCTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTGCTGTCGATGCAAGTTTGGTGTGTGTTAACTGGCTCGCTTCTGTTCTTTCGGATAGCAATTTGACTGTGGATGCTCCACCATGCTGGCAAGATTCCAAAAACCTGACCGTGTTGTCGTGCTTTTCACACGCAAACTGGCAGCTTGGTGACTGGTGCATGGTTGCAGACCAAGAGGAACAGACTGTTCAACATGCACCCACACGAAGTCTTACTATGAGTATGACAAGAGGGTGTAAGAGTCAGGGAAGAAACCTTGTTAACTCTTGTATTGGGGAATTTTTTATAATTGGGAAGATAAAGACCAAAGTTGACATTTTGTGGCAAAATGGTGAACATAGTTTGGGATTAAATCCAGAGAGTTTACTCCCAGTGAATGTTATAAACACACATGAATTTTGGCCTCATCAGTTTGTACTGGAAAAAGGTGTTTCTTACGATCCTCTTAAGCCTGGCAGTAAAAGATGGGGTGTTGTCCAATGTGTGGATGCGAAGGAGCATACTGTAAAGGTACAATGGAAAACTGTTTCCATGTCCAAACCGAATAGTTTGGATGGAGACGAAATGGAGGAAACTGTGAGTGCCTACGAACTAGTTGAGCACCCAGATTACTCCTGTTTTTTTGGTGATATTATGTTCAAGGCGGCTCAAAAACAGTTTGGTTACCAAGCTGATAAAGATACAGAAAAGTCGGGTAATGACATGAATGCGGAGGCTGCTCTTAAAAATGGGAACCAAATGAATTATCAAGATGACTTCCCTGATGACTGTTACCTGCGCTGTGTTGGCACTGTTATTGGTTTCAAAGATGGTGATGTGGAGGTGAAATTGGCTACTGGTTTCACAACCAAGGTTCCGCCTTATGAAATTTTTCGGATTGATAAACACGAAGGTGCAACTGTAACCCCTGCTCCTCAAGAGATGATTGAACGCGGAAGTCTACCTTCTGATAAGAAGGGAAAGGACTTGTTAAGTGGTGATGGTAGAAAAGAGAATTTGGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCTCGAGCGGCCTTTGAACTTTTTTCCAGTATTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCAGTGCCTAAATTTGAAATGGATAATGAATCAGATTATCCTGATAAGAAAGAGTTGGAAACTTGTAATTTCTGCATTGAACCACATCCAACGGATGAGTTGCAATCTACTGAAGACAGAACTTCATATCCAGAAGTTATTAGGATCCATGACAAGAATGATTTTCCGCTTTCTTTAGAAAGCAACAGTTCAAACCAGTTTAAGCAGTTTGATGTTATAGAAAGTTGTTCTGAGGACCACCATTTTTTTGATGAGGGAAAAGAATTGTCAACATTGCAGGTAAAAAAAGGTTGGGTGAAAAAGGTTCAACAAGAATGGAGCATCCTTGAGAGAAGTCTTCCGGACCCTATTTATGTTCGTGTGTTTGAAGAAAGAATGGATCTCATGCGAGCAGTAATTGTTGGTGCAACTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCGGAGTATCCTAACGAACCACCTATGGTGCACTACAATTCTGGCGGGCTCCGCTTAAATCCTAATTTATATGAATCAGGGAAAATCTGTCTGAGTCTCCTAAATACTTGGACAGGCGCAGGCTCTGAAGTGTGGAATCCTGGAACCTCCACTATTCTTCAAGTTCTTCTCTCTCTACAGGCTCTTGTCCTTAATGAGAAGCCTTACTTTAATGAGGCTGGTTATGACCAACAAATAGGTAGAGCTGAGGGAGAGAAAAATTCTGTGAGCTATAATGAGAATGCTTTCCTTGTCACAGCCAAATCTATGTTGTATCTATTACGAAAGCCACCTAAGCATTTTGAGGCACTGGTGGAAGAGCACTTCGAAAAGCGCTCCAAACATATACTTTTGGCTTGTAAAGCATATCTTGAAGGCGCTTCCATTGGATGTGGAAAAACTGAACATGAAAACCAGAAGGGGACTTCTGCAGGATTTAAAATAATGCTTGCTAAGCTCTTCCCCAAGCTTGTAGAAGCCTTTTGTGATAAGGGAATTGATTCCAGTCAGTTTGTTGAGCTGCAAGAATAA
Protein sequence

>Msa0612660

MDAMSSDSEWESSSDSSSSEDQEEIDFQYGGQAQSILSSLEESIGKIDDFLSFERTFVHGDVVCSVSDPSGQMGRVTSVDLFVDLENVKGKVLKNVNSDKLSKIRSISEGDYVTKGPWLGRAQRVVDKVTVLFDDGAKSDIIALEREKVLPLTRKFPEDSQCPYYPGQRVKVKSYNASKSAGWLCGTWRDNQDEGTVCAVDASLVCVNWLASVLSDSNLTVDAPPCWQDSKNLTVLSCFSHANWQLGDWCMVADQEEQTVQHAPTRSLTMSMTRGCKSQGRNLVNSCIGEFFIIGKIKTKVDILWQNGEHSLGLNPESLLPVNVINTHEFWPHQFVLEKGVSYDPLKPGSKRWGVVQCVDAKEHTVKVQWKTVSMSKPNSLDGDEMEETVSAYELVEHPDYSCFFGDIMFKAAQKQFGYQADKDTEKSGNDMNAEAALKNGNQMNYQDDFPDDCYLRCVGTVIGFKDGDVEVKLATGFTTKVPPYEIFRIDKHEGATVTPAPQEMIERGSLPSDKKGKDLLSGDGRKENLEQNLECSSFFLPRAAFELFSSIKSSIFQTLGGTSISGAFSSVPKFEMDNESDYPDKKELETCNFCIEPHPTDELQSTEDRTSYPEVIRIHDKNDFPLSLESNSSNQFKQFDVIESCSEDHHFFDEGKELSTLQVKKGWVKKVQQEWSILERSLPDPIYVRVFEERMDLMRAVIVGATGTPYHDGLFFFDICFPPEYPNEPPMVHYNSGGLRLNPNLYESGKICLSLLNTWTGAGSEVWNPGTSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTAKSMLYLLRKPPKHFEALVEEHFEKRSKHILLACKAYLEGASIGCGKTEHENQKGTSAGFKIMLAKLFPKLVEAFCDKGIDSSQFVELQE*