Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699890 | CAA0382413.1 | 80.263 | 152 | 30 | 0 | 1 | 152 | 603 | 754 | 9.81e-77 | 259 |
| Msa0699890 | CAA0382413.1 | 83.596 | 317 | 47 | 2 | 1 | 313 | 221 | 536 | 0.0 | 529 |
| Msa0699890 | CAA0382413.1 | 87.898 | 157 | 19 | 0 | 157 | 313 | 3 | 159 | 2.46e-81 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699890 | sp|O49506|GLO5_ARATH | 91.083 | 157 | 14 | 0 | 157 | 313 | 3 | 159 | 2.26e-97 | 294 |
| Msa0699890 | sp|O49506|GLO5_ARATH | 74.675 | 154 | 39 | 0 | 1 | 154 | 215 | 368 | 1.10e-79 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699890 | A0A5S9XDH6 | 80.263 | 152 | 30 | 0 | 1 | 152 | 603 | 754 | 4.69e-77 | 259 |
| Msa0699890 | A0A5S9XDH6 | 83.596 | 317 | 47 | 2 | 1 | 313 | 221 | 536 | 0.0 | 529 |
| Msa0699890 | A0A5S9XDH6 | 87.898 | 157 | 19 | 0 | 157 | 313 | 3 | 159 | 1.17e-81 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616680 | Msa0699890 | 0.829955 | 3.852981e-55 | -8.615850e-47 |
| Msa0616770 | Msa0699890 | 0.806493 | 8.008341e-50 | -8.615850e-47 |
| Msa0699890 | Msa1211600 | 0.804668 | 1.934676e-49 | -8.615850e-47 |
| Msa0699890 | Msa1217950 | 0.805020 | 1.633275e-49 | -8.615850e-47 |
| Msa0143630 | Msa0699890 | 0.805671 | 1.192573e-49 | -8.615850e-47 |
| Msa0481100 | Msa0699890 | 0.805204 | 1.494338e-49 | -8.615850e-47 |
| Msa0580850 | Msa0699890 | 0.804327 | 2.277798e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699890 | MtrunA17_Chr8g0376431 | 97.516 | 161 | 4 | 0 | 154 | 314 | 1 | 161 | 2.08e-110 | 325 |
| Msa0699890 | MtrunA17_Chr8g0376431 | 85.526 | 152 | 22 | 0 | 1 | 152 | 216 | 367 | 4.70e-90 | 273 |
| Msa0699890 | MtrunA17_Chr8g0376451 | 94.079 | 152 | 9 | 0 | 1 | 152 | 215 | 366 | 7.15e-102 | 303 |
| Msa0699890 | MtrunA17_Chr8g0376451 | 82.278 | 158 | 28 | 0 | 157 | 314 | 3 | 160 | 9.76e-91 | 275 |
| Msa0699890 | MtrunA17_Chr8g0376461 | 93.421 | 152 | 10 | 0 | 1 | 152 | 159 | 310 | 3.26e-100 | 297 |
| Msa0699890 | MtrunA17_Chr8g0376461 | 39.241 | 158 | 40 | 3 | 157 | 314 | 3 | 104 | 8.69e-27 | 107 |
| Msa0699890 | MtrunA17_Chr8g0376481 | 94.737 | 152 | 8 | 0 | 1 | 152 | 269 | 420 | 5.99e-100 | 300 |
| Msa0699890 | MtrunA17_Chr8g0376481 | 84.568 | 162 | 24 | 1 | 153 | 314 | 56 | 216 | 5.33e-88 | 269 |
| Msa0699890 | MtrunA17_Chr8g0376471 | 92.105 | 152 | 12 | 0 | 1 | 152 | 213 | 364 | 1.86e-98 | 294 |
| Msa0699890 | MtrunA17_Chr8g0376471 | 82.278 | 158 | 28 | 0 | 157 | 314 | 3 | 160 | 5.75e-85 | 259 |
| Msa0699890 | MtrunA17_Chr8g0376491 | 90.132 | 152 | 15 | 0 | 1 | 152 | 212 | 363 | 8.45e-97 | 290 |
| Msa0699890 | MtrunA17_Chr8g0376491 | 77.358 | 159 | 36 | 0 | 156 | 314 | 2 | 160 | 1.60e-76 | 238 |
| Msa0699890 | MtrunA17_Chr2g0312931 | 90.625 | 160 | 15 | 0 | 154 | 313 | 1 | 160 | 1.73e-93 | 282 |
| Msa0699890 | MtrunA17_Chr2g0312931 | 82.895 | 152 | 26 | 0 | 1 | 152 | 216 | 367 | 5.93e-88 | 268 |
| Msa0699890 | MtrunA17_Chr8g0376521 | 80.000 | 150 | 18 | 1 | 157 | 306 | 3 | 140 | 5.67e-75 | 228 |
| Msa0699890 | MtrunA17_Chr8g0376521 | 90.000 | 60 | 6 | 0 | 93 | 152 | 141 | 200 | 1.06e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699890 | AT4G18360.3 | 91.083 | 157 | 14 | 0 | 157 | 313 | 3 | 159 | 4.31e-100 | 295 |
| Msa0699890 | AT4G18360.2 | 91.083 | 157 | 14 | 0 | 157 | 313 | 3 | 159 | 3.02e-99 | 295 |
| Msa0699890 | AT4G18360.2 | 76.000 | 100 | 24 | 0 | 1 | 100 | 215 | 314 | 9.35e-50 | 168 |
| Msa0699890 | AT4G18360.1 | 91.083 | 157 | 14 | 0 | 157 | 313 | 3 | 159 | 2.29e-98 | 294 |
| Msa0699890 | AT4G18360.1 | 74.675 | 154 | 39 | 0 | 1 | 154 | 215 | 368 | 1.12e-80 | 249 |
| Msa0699890 | AT4G18360.4 | 91.083 | 157 | 14 | 0 | 157 | 313 | 3 | 159 | 2.29e-98 | 294 |
| Msa0699890 | AT4G18360.4 | 74.675 | 154 | 39 | 0 | 1 | 154 | 215 | 368 | 1.12e-80 | 249 |
| Msa0699890 | AT3G14420.1 | 90.446 | 157 | 15 | 0 | 157 | 313 | 3 | 159 | 2.77e-92 | 279 |
| Msa0699890 | AT3G14420.1 | 80.263 | 152 | 30 | 0 | 1 | 152 | 215 | 366 | 1.43e-84 | 259 |
| Msa0699890 | AT3G14420.2 | 90.446 | 157 | 15 | 0 | 157 | 313 | 3 | 159 | 2.77e-92 | 279 |
| Msa0699890 | AT3G14420.2 | 80.263 | 152 | 30 | 0 | 1 | 152 | 215 | 366 | 1.43e-84 | 259 |
| Msa0699890 | AT3G14420.3 | 90.446 | 157 | 15 | 0 | 157 | 313 | 3 | 159 | 3.02e-92 | 279 |
| Msa0699890 | AT3G14420.3 | 79.605 | 152 | 31 | 0 | 1 | 152 | 215 | 366 | 1.79e-83 | 256 |
| Msa0699890 | AT3G14415.2 | 87.261 | 157 | 20 | 0 | 157 | 313 | 3 | 159 | 2.32e-88 | 269 |
| Msa0699890 | AT3G14415.2 | 79.605 | 152 | 31 | 0 | 1 | 152 | 221 | 372 | 1.08e-84 | 259 |
| Msa0699890 | AT3G14415.1 | 87.261 | 157 | 20 | 0 | 157 | 313 | 3 | 159 | 2.99e-88 | 268 |
| Msa0699890 | AT3G14415.1 | 79.605 | 152 | 31 | 0 | 1 | 152 | 215 | 366 | 1.27e-84 | 259 |
| Msa0699890 | AT3G14415.3 | 87.261 | 157 | 20 | 0 | 157 | 313 | 3 | 159 | 2.99e-88 | 268 |
| Msa0699890 | AT3G14415.3 | 79.605 | 152 | 31 | 0 | 1 | 152 | 215 | 366 | 1.27e-84 | 259 |
| Msa0699890 | AT3G14420.4 | 80.263 | 152 | 30 | 0 | 1 | 152 | 196 | 347 | 1.45e-84 | 258 |
| Msa0699890 | AT3G14420.4 | 91.429 | 140 | 12 | 0 | 174 | 313 | 1 | 140 | 4.30e-81 | 249 |
| Msa0699890 | AT3G14420.5 | 80.263 | 152 | 30 | 0 | 1 | 152 | 208 | 359 | 2.13e-84 | 258 |
| Msa0699890 | AT3G14420.5 | 91.150 | 113 | 10 | 0 | 201 | 313 | 40 | 152 | 3.82e-59 | 194 |
| Msa0699890 | AT3G14420.6 | 80.263 | 152 | 30 | 0 | 1 | 152 | 214 | 365 | 2.94e-84 | 258 |
| Msa0699890 | AT3G14420.6 | 91.150 | 113 | 10 | 0 | 201 | 313 | 46 | 158 | 6.16e-59 | 193 |
| Msa0699890 | AT3G14130.2 | 67.123 | 146 | 48 | 0 | 1 | 146 | 105 | 250 | 1.78e-66 | 209 |
| Msa0699890 | AT3G14130.2 | 62.745 | 51 | 19 | 0 | 263 | 313 | 2 | 52 | 1.75e-13 | 69.7 |
| Msa0699890 | AT3G14150.7 | 67.123 | 146 | 48 | 0 | 1 | 146 | 105 | 250 | 4.93e-66 | 208 |
| Msa0699890 | AT3G14150.7 | 56.863 | 51 | 22 | 0 | 263 | 313 | 2 | 52 | 5.00e-12 | 65.5 |
| Msa0699890 | AT3G14150.5 | 67.123 | 146 | 48 | 0 | 1 | 146 | 105 | 250 | 4.93e-66 | 208 |
| Msa0699890 | AT3G14150.5 | 56.863 | 51 | 22 | 0 | 263 | 313 | 2 | 52 | 5.00e-12 | 65.5 |
| Msa0699890 | AT3G14150.4 | 67.123 | 146 | 48 | 0 | 1 | 146 | 127 | 272 | 7.60e-66 | 208 |
| Msa0699890 | AT3G14150.4 | 56.944 | 72 | 31 | 0 | 242 | 313 | 3 | 74 | 6.00e-15 | 73.9 |
| Msa0699890 | AT3G14150.3 | 67.123 | 146 | 48 | 0 | 1 | 146 | 127 | 272 | 7.60e-66 | 208 |
| Msa0699890 | AT3G14150.3 | 56.944 | 72 | 31 | 0 | 242 | 313 | 3 | 74 | 6.00e-15 | 73.9 |
| Msa0699890 | AT3G14150.6 | 67.123 | 146 | 48 | 0 | 1 | 146 | 127 | 272 | 7.60e-66 | 208 |
| Msa0699890 | AT3G14150.6 | 56.944 | 72 | 31 | 0 | 242 | 313 | 3 | 74 | 6.00e-15 | 73.9 |
| Msa0699890 | AT3G14130.4 | 67.123 | 146 | 48 | 0 | 1 | 146 | 169 | 314 | 1.07e-65 | 209 |
| Msa0699890 | AT3G14130.4 | 63.717 | 113 | 41 | 0 | 201 | 313 | 4 | 116 | 7.39e-39 | 139 |
| Msa0699890 | AT3G14130.3 | 67.123 | 146 | 48 | 0 | 1 | 146 | 213 | 358 | 2.48e-65 | 209 |
| Msa0699890 | AT3G14130.3 | 62.500 | 160 | 60 | 0 | 154 | 313 | 1 | 160 | 9.08e-62 | 200 |
| Msa0699890 | AT3G14130.1 | 67.123 | 146 | 48 | 0 | 1 | 146 | 213 | 358 | 2.48e-65 | 209 |
| Msa0699890 | AT3G14130.1 | 62.500 | 160 | 60 | 0 | 154 | 313 | 1 | 160 | 9.08e-62 | 200 |
| Msa0699890 | AT3G14150.2 | 67.123 | 146 | 48 | 0 | 1 | 146 | 213 | 358 | 5.33e-65 | 209 |
| Msa0699890 | AT3G14150.2 | 60.625 | 160 | 63 | 0 | 154 | 313 | 1 | 160 | 6.62e-60 | 196 |
| Msa0699890 | AT3G14150.1 | 67.123 | 146 | 48 | 0 | 1 | 146 | 213 | 358 | 5.33e-65 | 209 |
| Msa0699890 | AT3G14150.1 | 60.625 | 160 | 63 | 0 | 154 | 313 | 1 | 160 | 6.62e-60 | 196 |
Find 78 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCAGGCCGCGAATTCTT+AGG | 0.233661 | 4_4:-70680610 | Msa0699890:CDS |
| AGTACACCCTTCACTAAAAT+TGG | 0.252260 | 4_4:+70685309 | None:intergenic |
| CATAACCTTGGAGCAATTCT+TGG | 0.260384 | 4_4:+70684207 | None:intergenic |
| TCGAGGGACAGATGTCTTTA+AGG | 0.283772 | 4_4:-70684585 | Msa0699890:CDS |
| GCTATACAAGCTGGAGTTGC+TGG | 0.321958 | 4_4:-70684941 | Msa0699890:CDS |
| TCTTGTAACAGGATGTAAAA+TGG | 0.323320 | 4_4:-70685353 | None:intergenic |
| GATTTGACAACAACTGTATT+AGG | 0.324539 | 4_4:-70680572 | Msa0699890:CDS |
| CTATGTCCCTGCAACTATTA+TGG | 0.332495 | 4_4:-70684882 | Msa0699890:CDS |
| CCCTGCAACTATTATGGTCT+TGG | 0.355134 | 4_4:-70684876 | Msa0699890:CDS |
| GTCTTTAAGGCACTGGCTCT+TGG | 0.364162 | 4_4:-70684572 | Msa0699890:CDS |
| TCCAAGACCATAATAGTTGC+AGG | 0.375050 | 4_4:+70684875 | None:intergenic |
| ATGTGGTTGCCGTTCACTTA+AGG | 0.387309 | 4_4:-70684268 | Msa0699890:CDS |
| GCTAGGGCAGCATCAGCAGC+TGG | 0.397092 | 4_4:-70680187 | Msa0699890:CDS |
| GCACTGGCTCTTGGAGCATC+TGG | 0.397650 | 4_4:-70684563 | Msa0699890:CDS |
| AGCTGAATCTGCCGGTTTCA+AGG | 0.404696 | 4_4:-70679513 | Msa0699890:CDS |
| GTTGAGGAAGTTGCTTCAAC+AGG | 0.428535 | 4_4:-70680022 | Msa0699890:CDS |
| GTTTACGACTACTTTGCATC+AGG | 0.436977 | 4_4:-70680774 | Msa0699890:CDS |
| AAGACCAGTGGTGTTCTCAT+TGG | 0.450976 | 4_4:-70684364 | Msa0699890:CDS |
| GAATCCTGGAGAATGCATTT+CGG | 0.451918 | 4_4:+70680721 | None:intergenic |
| AAAGTAGTCGTAAACCATCT+TGG | 0.456025 | 4_4:+70680782 | None:intergenic |
| GTTCAGGCCGCGAATTCTTA+GGG | 0.458882 | 4_4:-70680609 | Msa0699890:CDS |
| AAGTAGTCGTAAACCATCTT+GGG | 0.463251 | 4_4:+70680783 | None:intergenic |
| ATAACCTTGGAGCAATTCTT+GGG | 0.475369 | 4_4:+70684208 | None:intergenic |
| AAGTGCAATTGCCTTGAAAC+CGG | 0.481235 | 4_4:+70679502 | None:intergenic |
| AACTTCCTCAACACTGGAAG+TGG | 0.484280 | 4_4:+70680033 | None:intergenic |
| CATCAGGGGCAGAAGATCAA+TGG | 0.490128 | 4_4:-70680758 | Msa0699890:CDS |
| GTGACCATGTTGTCACAGAA+TGG | 0.496567 | 4_4:-70684236 | Msa0699890:CDS |
| AACTATTATGGTCTTGGAAG+AGG | 0.498178 | 4_4:-70684870 | Msa0699890:intron |
| GTAGGGAGATTACAGAATCC+TGG | 0.500080 | 4_4:+70680707 | None:intergenic |
| CTTACATCCCTAAGAATTCG+CGG | 0.501659 | 4_4:+70680602 | None:intergenic |
| GTAATATCCTCACATAGAGT+TGG | 0.509445 | 4_4:+70679981 | None:intergenic |
| TCCTACAGCCATGCAAAAGA+TGG | 0.512015 | 4_4:-70680519 | Msa0699890:CDS |
| TGACCATGTTGTCACAGAAT+GGG | 0.516417 | 4_4:-70684235 | Msa0699890:CDS |
| GACAGATGTCTTTAAGGCAC+TGG | 0.529071 | 4_4:-70684579 | Msa0699890:CDS |
| GTGAAAAGAGCTGAATCTGC+CGG | 0.538214 | 4_4:-70679521 | Msa0699890:CDS |
| GAACTCTTCCTTCCGCAGCT+TGG | 0.539762 | 4_4:+70684633 | None:intergenic |
| GCTGTAGGAGCAATCATGAT+AGG | 0.541426 | 4_4:+70680533 | None:intergenic |
| GCCGGTGTGAGAAAAGTACT+TGG | 0.542278 | 4_4:-70684327 | Msa0699890:CDS |
| TGTAACAGACACTATCCTCA+TGG | 0.545799 | 4_4:-70680057 | Msa0699890:intron |
| ATCAGCAGCTGGCACAATCA+TGG | 0.546503 | 4_4:-70680176 | Msa0699890:intron |
| GCTCGGTTAGCTATACAAGC+TGG | 0.546590 | 4_4:-70684950 | Msa0699890:CDS |
| TAGGAGAATATGCTACTGCT+AGG | 0.554020 | 4_4:-70680204 | Msa0699890:CDS |
| GTGTTCTCATTGGCAGCTGA+TGG | 0.554966 | 4_4:-70684354 | Msa0699890:CDS |
| AGAACCGAAATGCATTCTCC+AGG | 0.555725 | 4_4:-70680725 | Msa0699890:CDS |
| TTGCAGGGACATAGTCAAGT+TGG | 0.565500 | 4_4:+70684891 | None:intergenic |
| AAGTTGGCGAGCACCGTGGT+TGG | 0.568369 | 4_4:+70684907 | None:intergenic |
| GGAATCATTGTTTCCAACCA+CGG | 0.585644 | 4_4:-70684920 | Msa0699890:CDS |
| ATGGGCCACTTCCAGTGTTG+AGG | 0.589860 | 4_4:-70680038 | Msa0699890:CDS |
| ATGGATGGTGGAGTCCGTCG+AGG | 0.590414 | 4_4:-70684602 | Msa0699890:CDS |
| TTGGCAGCTGATGGTGAAGC+CGG | 0.591322 | 4_4:-70684345 | Msa0699890:CDS |
| TGAAGCAACTTCCTCAACAC+TGG | 0.594389 | 4_4:+70680027 | None:intergenic |
| TTTACGACTACTTTGCATCA+GGG | 0.594659 | 4_4:-70680773 | Msa0699890:CDS |
| GTAACAGACACTATCCTCAT+GGG | 0.597962 | 4_4:-70680056 | Msa0699890:intron |
| CAAAAGATGGCTCACCCCGA+AGG | 0.599659 | 4_4:-70680506 | Msa0699890:intron |
| GAAGTTGCTTCAACAGGACC+CGG | 0.601516 | 4_4:-70680016 | Msa0699890:CDS |
| CAAGGCAATTGCACTTACCG+TGG | 0.610303 | 4_4:-70679495 | Msa0699890:CDS |
| GGTCCCATTCTGTGACAACA+TGG | 0.610887 | 4_4:+70684232 | None:intergenic |
| TAGGTTGTCCAAGCTGCGGA+AGG | 0.613977 | 4_4:-70684641 | Msa0699890:CDS |
| CTTCACTAAAATTGGCAATG+AGG | 0.615448 | 4_4:+70685317 | None:intergenic |
| TGGATGGTGGAGTCCGTCGA+GGG | 0.617226 | 4_4:-70684601 | Msa0699890:CDS |
| TTACGACTACTTTGCATCAG+GGG | 0.621680 | 4_4:-70680772 | Msa0699890:CDS |
| GAGTTATGTCCTTAAGTGAA+CGG | 0.629119 | 4_4:+70684259 | None:intergenic |
| TGAATAGGTTGTCCAAGCTG+CGG | 0.631666 | 4_4:-70684645 | Msa0699890:intron |
| GCTGCCAATGAGAACACCAC+TGG | 0.634284 | 4_4:+70684360 | None:intergenic |
| GGTGATTAAAGACAGAAATG+TGG | 0.634813 | 4_4:-70679555 | Msa0699890:CDS |
| AACACTGGAAGTGGCCCATG+AGG | 0.637059 | 4_4:+70680042 | None:intergenic |
| AGGAGAATATGCTACTGCTA+GGG | 0.637495 | 4_4:-70680203 | Msa0699890:CDS |
| TTGTCAGATTGGAAGACCAG+TGG | 0.637981 | 4_4:-70684376 | Msa0699890:intron |
| CCAAGACCATAATAGTTGCA+GGG | 0.639911 | 4_4:+70684876 | None:intergenic |
| TAAAGACATCTGTCCCTCGA+CGG | 0.642464 | 4_4:+70684588 | None:intergenic |
| ACCTTGGAGCAATTCTTGGG+CGG | 0.644746 | 4_4:+70684211 | None:intergenic |
| CCGGTGTGAGAAAAGTACTT+GGG | 0.656959 | 4_4:-70684326 | Msa0699890:CDS |
| ACCGCCCAAGAATTGCTCCA+AGG | 0.670509 | 4_4:-70684212 | Msa0699890:intron |
| GAAAGAACCATGGCACTATG+TGG | 0.675929 | 4_4:-70684285 | Msa0699890:CDS |
| ACGGCAACCACATAGTGCCA+TGG | 0.678893 | 4_4:+70684278 | None:intergenic |
| TGATGAGCTTGAAAGAACCA+TGG | 0.701984 | 4_4:-70684295 | Msa0699890:CDS |
| CGACATTATACATACCTTCG+GGG | 0.719344 | 4_4:+70680492 | None:intergenic |
| AGTCAAGTTGGCGAGCACCG+TGG | 0.746633 | 4_4:+70684903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATATTTTAAAAAAATA+AGG | - | chr4_4:70682166-70682185 | Msa0699890:intron | 0.0% |
| !!! | AAAAAAAATTTTAAAAAATA+AGG | + | chr4_4:70683030-70683049 | None:intergenic | 0.0% |
| !!! | AAATTTTTTTATTATATAAT+TGG | - | chr4_4:70683275-70683294 | Msa0699890:intron | 0.0% |
| !!! | AATTTTTTTATTATATAATT+GGG | - | chr4_4:70683276-70683295 | Msa0699890:intron | 0.0% |
| !! | AAGCAATAAAAAAATAATAT+TGG | + | chr4_4:70680079-70680098 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATTAAAATTC+TGG | - | chr4_4:70682306-70682325 | Msa0699890:intron | 10.0% |
| !! | TAAAAAAGTTTAAAAAATTC+TGG | + | chr4_4:70683116-70683135 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | + | chr4_4:70681860-70681879 | None:intergenic | 10.0% |
| !! | TTATTTGCATATATTTATAT+TGG | - | chr4_4:70683635-70683654 | Msa0699890:intron | 10.0% |
| !!! | AAATGTATTTGTTATTAGTA+CGG | + | chr4_4:70680107-70680126 | None:intergenic | 15.0% |
| !! | TTCAATATATTACTTTGAAT+AGG | - | chr4_4:70680166-70680185 | Msa0699890:intron | 15.0% |
| !! | TTAACTAACTTCTTAATAAT+TGG | + | chr4_4:70681091-70681110 | None:intergenic | 15.0% |
| !! | TTTATTTAATTGTAACAAGT+TGG | - | chr4_4:70681338-70681357 | Msa0699890:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_4:70681500-70681519 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_4:70681499-70681518 | Msa0699890:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4_4:70681523-70681542 | Msa0699890:intron | 15.0% |
| !! | AGAAAAAGTTATTATTGTAT+TGG | - | chr4_4:70681586-70681605 | Msa0699890:intron | 15.0% |
| !! | TTGATATTGTACAATAATAT+AGG | - | chr4_4:70681685-70681704 | Msa0699890:intron | 15.0% |
| !! | TGATATTGTACAATAATATA+GGG | - | chr4_4:70681686-70681705 | Msa0699890:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr4_4:70681797-70681816 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr4_4:70681798-70681817 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | chr4_4:70683374-70683393 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | chr4_4:70683373-70683392 | None:intergenic | 15.0% |
| !! | CTATAAAAAAAAAATTTGCA+GGG | + | chr4_4:70681919-70681938 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTTGC+AGG | + | chr4_4:70681920-70681939 | None:intergenic | 15.0% |
| !! | GGAAAAAAAATTAAAAATTC+TGG | - | chr4_4:70682187-70682206 | Msa0699890:intron | 15.0% |
| !! | CGAAATTATAAAAAAAATTC+TGG | - | chr4_4:70682377-70682396 | Msa0699890:intron | 15.0% |
| !!! | TAAAAATTCTGAAAAAATTC+TGG | - | chr4_4:70682429-70682448 | Msa0699890:intron | 15.0% |
| !! | TATTTATAAATCGAGAATAA+GGG | + | chr4_4:70682581-70682600 | None:intergenic | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | + | chr4_4:70682615-70682634 | None:intergenic | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | + | chr4_4:70682640-70682659 | None:intergenic | 15.0% |
| !! | TTTATTTCCAAAAAAATTTC+CGG | + | chr4_4:70682757-70682776 | None:intergenic | 15.0% |
| !!! | CGAAATTTTAATAAAAATTC+TGG | + | chr4_4:70682825-70682844 | None:intergenic | 15.0% |
| !!! | AATAAAATTTCGAAATTTTC+TGG | + | chr4_4:70682880-70682899 | None:intergenic | 15.0% |
| !! | AGGAAAAAATTTAAAAATTC+TGG | + | chr4_4:70683010-70683029 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr4_4:70683373-70683392 | Msa0699890:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr4_4:70683374-70683393 | Msa0699890:intron | 15.0% |
| !! | AAAACAAAAATATTGAAAAC+AGG | + | chr4_4:70684187-70684206 | None:intergenic | 15.0% |
| !! | ACAAATGAAATAAAAAATGA+GGG | + | chr4_4:70684870-70684889 | None:intergenic | 15.0% |
| !! | TACAAATGAAATAAAAAATG+AGG | + | chr4_4:70684871-70684890 | None:intergenic | 15.0% |
| !! | AAAGATCATAATGTTTAATA+AGG | - | chr4_4:70685095-70685114 | Msa0699890:intron | 15.0% |
| !!! | GTCAATATAAAAAGTTTTTG+TGG | + | chr4_4:70679719-70679738 | None:intergenic | 20.0% |
| !! | CAACAAAGATCAAATTAATA+AGG | + | chr4_4:70679805-70679824 | None:intergenic | 20.0% |
| !!! | CTTATTAATTTGATCTTTGT+TGG | - | chr4_4:70679803-70679822 | Msa0699890:intron | 20.0% |
| !!! | ATTTTTTTGTTTCCATTTGA+TGG | - | chr4_4:70680123-70680142 | Msa0699890:intron | 20.0% |
| !! | GAAAAATAAATTATTCTGCA+GGG | + | chr4_4:70680149-70680168 | None:intergenic | 20.0% |
| !! | TGAAAAATAAATTATTCTGC+AGG | + | chr4_4:70680150-70680169 | None:intergenic | 20.0% |
| !! | GTAAGTATATGAAAATTTGA+TGG | - | chr4_4:70680293-70680312 | Msa0699890:intron | 20.0% |
| !! | TTAACAAATTCATCTAAGTT+CGG | + | chr4_4:70680751-70680770 | None:intergenic | 20.0% |
| !!! | CTAGTATCAATTGTTATTTT+AGG | - | chr4_4:70680796-70680815 | Msa0699890:CDS | 20.0% |
| !! | TTAACTAATTTCTTTCTTCA+AGG | + | chr4_4:70681120-70681139 | None:intergenic | 20.0% |
| !! | AAATTAGTTAAATAGATCGT+AGG | - | chr4_4:70681129-70681148 | Msa0699890:intron | 20.0% |
| !! | TTAAGTAAGTTAAAAGACTT+CGG | + | chr4_4:70681267-70681286 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_4:70681509-70681528 | None:intergenic | 20.0% |
| !! | TAATATAGTAGGCTTAAATA+TGG | - | chr4_4:70681733-70681752 | Msa0699890:intron | 20.0% |
| !! | GTATTTATAAATCGAGAATA+AGG | + | chr4_4:70682582-70682601 | None:intergenic | 20.0% |
| !!! | TTTTTGTGTATTTATAAACC+GGG | + | chr4_4:70682614-70682633 | None:intergenic | 20.0% |
| !! | TATAAATACACAAAAATTCC+CGG | - | chr4_4:70682618-70682637 | Msa0699890:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | + | chr4_4:70682639-70682658 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | + | chr4_4:70682724-70682743 | None:intergenic | 20.0% |
| !! | TTATAAATACACAAAATTCC+CGG | - | chr4_4:70682735-70682754 | Msa0699890:intron | 20.0% |
| !! | TTATTTCCAAAAAAATTTCC+GGG | + | chr4_4:70682756-70682775 | None:intergenic | 20.0% |
| !! | TCTGGAAAAAATTAAAATTC+TGG | + | chr4_4:70682862-70682881 | None:intergenic | 20.0% |
| !! | TACTATATTAGGCTTAAATA+TGG | + | chr4_4:70683438-70683457 | None:intergenic | 20.0% |
| !! | GAAATATGTCATACTATATT+AGG | + | chr4_4:70683449-70683468 | None:intergenic | 20.0% |
| !! | AAAGTAAAACAAAGTAATAG+AGG | + | chr4_4:70683533-70683552 | None:intergenic | 20.0% |
| !! | AAACGGAAATAAAAGTAAAA+GGG | + | chr4_4:70683592-70683611 | None:intergenic | 20.0% |
| !! | AAAACGGAAATAAAAGTAAA+AGG | + | chr4_4:70683593-70683612 | None:intergenic | 20.0% |
| !! | ATTAAGCAAGAAGAATAAAA+CGG | + | chr4_4:70683609-70683628 | None:intergenic | 20.0% |
| !! | ATAAATATATGCAAATAACG+TGG | + | chr4_4:70683633-70683652 | None:intergenic | 20.0% |
| !! | TCAAATAAAAGAAGTTTGTA+GGG | + | chr4_4:70684139-70684158 | None:intergenic | 20.0% |
| !! | ATCAAATAAAAGAAGTTTGT+AGG | + | chr4_4:70684140-70684159 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTTTGTGAAAAC+AGG | - | chr4_4:70684195-70684214 | Msa0699890:intron | 20.0% |
| !! | GTACATGATAAAAAAACAAT+CGG | + | chr4_4:70684505-70684524 | None:intergenic | 20.0% |
| !! | TGTTTGTCAATTTAACAATA+AGG | + | chr4_4:70684926-70684945 | None:intergenic | 20.0% |
| !! | CATGAGAATAAAATTCTAAA+CGG | + | chr4_4:70685173-70685192 | None:intergenic | 20.0% |
| ! | TGTCAATTGTTATAATCGTT+CGG | + | chr4_4:70679696-70679715 | None:intergenic | 25.0% |
| ! | ATCATAATGCAGGATTTAAT+TGG | + | chr4_4:70679773-70679792 | None:intergenic | 25.0% |
| ! | ATAAAGTATACTCATAACCT+TGG | + | chr4_4:70680634-70680653 | None:intergenic | 25.0% |
| ! | CAATTGTATCGTATCATATT+TGG | - | chr4_4:70680834-70680853 | Msa0699890:CDS | 25.0% |
| !!! | GGTCGAATAATTGTTATTTT+AGG | - | chr4_4:70680855-70680874 | Msa0699890:intron | 25.0% |
| ! | TGTTTCATACAATTTAATCG+TGG | - | chr4_4:70680896-70680915 | Msa0699890:intron | 25.0% |
| ! | TCAATAATGCAAACTTACTT+TGG | + | chr4_4:70680928-70680947 | None:intergenic | 25.0% |
| ! | AAAATATGAGTTTGATCGTT+TGG | + | chr4_4:70680973-70680992 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTGACGTGATTTA+TGG | - | chr4_4:70681034-70681053 | Msa0699890:intron | 25.0% |
| !!! | CTTTTTTTGACGTGATTTAT+GGG | - | chr4_4:70681035-70681054 | Msa0699890:intron | 25.0% |
| ! | TTCGGATATAATTTAGTCTA+AGG | + | chr4_4:70681249-70681268 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | - | chr4_4:70681466-70681485 | Msa0699890:intron | 25.0% |
| ! | GAGAGACATAATAATATAGT+AGG | - | chr4_4:70681722-70681741 | Msa0699890:intron | 25.0% |
| !!! | AAAACTTACCTATTTTTGCA+GGG | + | chr4_4:70681826-70681845 | None:intergenic | 25.0% |
| !! | ATTTTTCCAGAATTTTTGCA+AGG | + | chr4_4:70681950-70681969 | None:intergenic | 25.0% |
| ! | TATAAATACACAAAAGTTCC+CGG | - | chr4_4:70682593-70682612 | Msa0699890:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | - | chr4_4:70682711-70682730 | Msa0699890:intron | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | + | chr4_4:70682725-70682744 | None:intergenic | 25.0% |
| !!! | AAAATTCCCGGAAATTTTTT+TGG | - | chr4_4:70682747-70682766 | Msa0699890:intron | 25.0% |
| ! | TTTATTATATAATTGGGGTC+AGG | - | chr4_4:70683282-70683301 | Msa0699890:intron | 25.0% |
| ! | TTATTATATAATTGGGGTCA+GGG | - | chr4_4:70683283-70683302 | Msa0699890:intron | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | - | chr4_4:70683312-70683331 | Msa0699890:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | - | chr4_4:70683313-70683332 | Msa0699890:intron | 25.0% |
| ! | ATTAGGCTTAAATATGGTAT+TGG | + | chr4_4:70683432-70683451 | None:intergenic | 25.0% |
| ! | GATAATTTGATATACACTGT+TGG | - | chr4_4:70683862-70683881 | Msa0699890:intron | 25.0% |
| ! | CAACAACAACAATATAATAC+AGG | + | chr4_4:70684418-70684437 | None:intergenic | 25.0% |
| ! | ATTTATGTTTACTGCAATTG+AGG | - | chr4_4:70684562-70684581 | Msa0699890:CDS | 25.0% |
| !! | CAAATTATGCAATTTTGTGT+AGG | - | chr4_4:70684603-70684622 | Msa0699890:CDS | 25.0% |
| ! | ATTTCCATCATATTTGTTCT+CGG | - | chr4_4:70684677-70684696 | Msa0699890:intron | 25.0% |
| ! | TTAAACATTATGATCTTTGC+TGG | + | chr4_4:70685093-70685112 | None:intergenic | 25.0% |
| ! | TAAAATTCTAAACGGAAGTA+TGG | + | chr4_4:70685165-70685184 | None:intergenic | 25.0% |
| !!! | GTAGTTTTTTTTCTTCTCTT+AGG | - | chr4_4:70685250-70685269 | Msa0699890:intron | 25.0% |
| !! | TCATTGCCAATTTTAGTGAA+GGG | - | chr4_4:70679511-70679530 | Msa0699890:CDS | 30.0% |
| AATACTCTAATAATGCAGCT+CGG | - | chr4_4:70679859-70679878 | Msa0699890:intron | 30.0% | |
| !!! | AGGAAGAGTTCCTATTTTTA+TGG | - | chr4_4:70680205-70680224 | Msa0699890:intron | 30.0% |
| !!! | AGAGTTCCTATTTTTATGGA+TGG | - | chr4_4:70680209-70680228 | Msa0699890:intron | 30.0% |
| ATTATTACGCTAGGGAATTT+AGG | + | chr4_4:70680320-70680339 | None:intergenic | 30.0% | |
| ! | CATCTTGTAATTTGTCAGAT+TGG | - | chr4_4:70680439-70680458 | Msa0699890:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_4:70681417-70681436 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_4:70681418-70681437 | Msa0699890:intron | 30.0% |
| !! | AAGCGACACTCATTTTAAAA+CGG | - | chr4_4:70681652-70681671 | Msa0699890:intron | 30.0% |
| AGTAGGCTTAAATATGGTAT+TGG | - | chr4_4:70681739-70681758 | Msa0699890:intron | 30.0% | |
| !! | TTTTTAGTCCCTGCAAAAAT+AGG | - | chr4_4:70681815-70681834 | Msa0699890:intron | 30.0% |
| !!! | CAAAACTTACCTATTTTTGC+AGG | + | chr4_4:70681827-70681846 | None:intergenic | 30.0% |
| ! | CTGCAAAAATAGGTAAGTTT+TGG | - | chr4_4:70681825-70681844 | Msa0699890:intron | 30.0% |
| ! | TTTTTGATCCCTGCAAAAAT+AGG | - | chr4_4:70681876-70681895 | Msa0699890:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_4:70683345-70683364 | None:intergenic | 30.0% |
| ATACACAAAAAACCTAAGCT+CGG | - | chr4_4:70682676-70682695 | Msa0699890:intron | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | + | chr4_4:70682691-70682710 | None:intergenic | 30.0% | |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | + | chr4_4:70683316-70683335 | None:intergenic | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4_4:70683345-70683364 | Msa0699890:intron | 30.0% |
| ! | CAAAACTGACCTATTTTACA+GGG | - | chr4_4:70683405-70683424 | Msa0699890:intron | 30.0% |
| TGCAAATACATACCAGAAAT+TGG | - | chr4_4:70683701-70683720 | Msa0699890:intron | 30.0% | |
| GCAAATACATACCAGAAATT+GGG | - | chr4_4:70683702-70683721 | Msa0699890:intron | 30.0% | |
| CAAATACATACCAGAAATTG+GGG | - | chr4_4:70683703-70683722 | Msa0699890:intron | 30.0% | |
| AATTATGAATCATCACAGAG+TGG | + | chr4_4:70683807-70683826 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGCATAGCATCTT+TGG | - | chr4_4:70683891-70683910 | Msa0699890:intron | 30.0% |
| GATTTGACAACAACTGTATT+AGG | - | chr4_4:70684254-70684273 | Msa0699890:CDS | 30.0% | |
| TGGTCTGTGTTTACATTATA+AGG | - | chr4_4:70684374-70684393 | Msa0699890:intron | 30.0% | |
| CAATATAATACAGGAAGCAA+TGG | + | chr4_4:70684409-70684428 | None:intergenic | 30.0% | |
| AAACAATCGGAATTCTGTAT+GGG | + | chr4_4:70684492-70684511 | None:intergenic | 30.0% | |
| AAAACAATCGGAATTCTGTA+TGG | + | chr4_4:70684493-70684512 | None:intergenic | 30.0% | |
| TTAAGCATAACAAGTGCATT+GGG | + | chr4_4:70684717-70684736 | None:intergenic | 30.0% | |
| ATTAAGCATAACAAGTGCAT+TGG | + | chr4_4:70684718-70684737 | None:intergenic | 30.0% | |
| ! | TGTTATGCTTAATTAGCTTC+TGG | - | chr4_4:70684725-70684744 | Msa0699890:intron | 30.0% |
| TCTATAAGGCTATTTAGTCA+AGG | + | chr4_4:70685132-70685151 | None:intergenic | 30.0% | |
| ATGGAGGAGATTATTCTATA+AGG | + | chr4_4:70685146-70685165 | None:intergenic | 30.0% | |
| AATAGACTAAGTAGTTGACA+AGG | + | chr4_4:70685230-70685249 | None:intergenic | 30.0% | |
| CTTCACTAAAATTGGCAATG+AGG | + | chr4_4:70679512-70679531 | None:intergenic | 35.0% | |
| !! | CTCATTGCCAATTTTAGTGA+AGG | - | chr4_4:70679510-70679529 | Msa0699890:CDS | 35.0% |
| AGTACACCCTTCACTAAAAT+TGG | + | chr4_4:70679520-70679539 | None:intergenic | 35.0% | |
| ATCAATACCAATCGTATGTG+TGG | - | chr4_4:70679629-70679648 | Msa0699890:intron | 35.0% | |
| ! | AACTATTATGGTCTTGGAAG+AGG | - | chr4_4:70679956-70679975 | Msa0699890:intron | 35.0% |
| !!! | GTTCCTATTTTTATGGATGG+TGG | - | chr4_4:70680212-70680231 | Msa0699890:intron | 35.0% |
| ACTCCACCATCCATAAAAAT+AGG | + | chr4_4:70680218-70680237 | None:intergenic | 35.0% | |
| ! | TGTGTGCTATTATTACGCTA+GGG | + | chr4_4:70680328-70680347 | None:intergenic | 35.0% |
| GAGTTATGTCCTTAAGTGAA+CGG | + | chr4_4:70680570-70680589 | None:intergenic | 35.0% | |
| ATAACCTTGGAGCAATTCTT+GGG | + | chr4_4:70680621-70680640 | None:intergenic | 35.0% | |
| CTTTATAGTGTTTGAGCTTG+AGG | - | chr4_4:70680648-70680667 | Msa0699890:intron | 35.0% | |
| !! | ATTCATCTAAGTTCGGTGTA+TGG | + | chr4_4:70680744-70680763 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4_4:70681548-70681567 | Msa0699890:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4_4:70681552-70681571 | Msa0699890:intron | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | + | chr4_4:70681766-70681785 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_4:70683344-70683363 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_4:70681886-70681905 | Msa0699890:intron | 35.0% |
| TTTGGTCCTTGCAAAAATTC+TGG | - | chr4_4:70681941-70681960 | Msa0699890:intron | 35.0% | |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4_4:70681886-70681905 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4_4:70683344-70683363 | Msa0699890:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_4:70683356-70683375 | None:intergenic | 35.0% |
| ! | CCTGTAAAATAGGTCAGTTT+TGG | + | chr4_4:70683407-70683426 | None:intergenic | 35.0% |
| ! | CCAAAACTGACCTATTTTAC+AGG | - | chr4_4:70683404-70683423 | Msa0699890:intron | 35.0% |
| GCAAAAACAAAACAGAGTAC+GGG | + | chr4_4:70683511-70683530 | None:intergenic | 35.0% | |
| GGCAAAAACAAAACAGAGTA+CGG | + | chr4_4:70683512-70683531 | None:intergenic | 35.0% | |
| TCTCATCCTCTTCAATTCAA+AGG | - | chr4_4:70683558-70683577 | Msa0699890:intron | 35.0% | |
| AAATGTGAAACCCCAATTTC+TGG | + | chr4_4:70683716-70683735 | None:intergenic | 35.0% | |
| !! | TTGCATAGCATCTTTGGTTT+TGG | - | chr4_4:70683897-70683916 | Msa0699890:intron | 35.0% |
| !!! | ATAGCATCTTTGGTTTTGGA+GGG | - | chr4_4:70683901-70683920 | Msa0699890:intron | 35.0% |
| TTATCAAATCCATCTTCCTG+AGG | + | chr4_4:70683982-70684001 | None:intergenic | 35.0% | |
| AAGTAGTCGTAAACCATCTT+GGG | + | chr4_4:70684046-70684065 | None:intergenic | 35.0% | |
| AAAGTAGTCGTAAACCATCT+TGG | + | chr4_4:70684047-70684066 | None:intergenic | 35.0% | |
| TTTACGACTACTTTGCATCA+GGG | - | chr4_4:70684053-70684072 | Msa0699890:intron | 35.0% | |
| ! | TGTTTTGTGAAAACAGGTTC+AGG | - | chr4_4:70684201-70684220 | Msa0699890:intron | 35.0% |
| ACGACATTATACATACCTTC+GGG | + | chr4_4:70684338-70684357 | None:intergenic | 35.0% | |
| GACGACATTATACATACCTT+CGG | + | chr4_4:70684339-70684358 | None:intergenic | 35.0% | |
| AAAGCCGAGAACAAATATGA+TGG | + | chr4_4:70684684-70684703 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCCAACTCTATGTG+AGG | - | chr4_4:70684838-70684857 | Msa0699890:intron | 35.0% |
| GTAATATCCTCACATAGAGT+TGG | + | chr4_4:70684848-70684867 | None:intergenic | 35.0% | |
| ATTGCGACAAACACATCAAA+GGG | + | chr4_4:70684899-70684918 | None:intergenic | 35.0% | |
| ATTTCTGTGATGCTTGTAAC+AGG | - | chr4_4:70684946-70684965 | Msa0699890:CDS | 35.0% | |
| !!! | TGTTTTAGTGTCGTTGTACT+AGG | - | chr4_4:70685030-70685049 | Msa0699890:intron | 35.0% |
| TCTTTGCTGGTATAAATTGC+AGG | + | chr4_4:70685080-70685099 | None:intergenic | 35.0% | |
| ! | AATTCTAAACGGAAGTATGG+AGG | + | chr4_4:70685162-70685181 | None:intergenic | 35.0% |
| GGTGATTAAAGACAGAAATG+TGG | - | chr4_4:70685271-70685290 | Msa0699890:intron | 35.0% | |
| GGAATCATTGTTTCCAACCA+CGG | - | chr4_4:70679906-70679925 | Msa0699890:intron | 40.0% | |
| CTATGTCCCTGCAACTATTA+TGG | - | chr4_4:70679944-70679963 | Msa0699890:intron | 40.0% | |
| CCAAGACCATAATAGTTGCA+GGG | + | chr4_4:70679953-70679972 | None:intergenic | 40.0% | |
| TCCAAGACCATAATAGTTGC+AGG | + | chr4_4:70679954-70679973 | None:intergenic | 40.0% | |
| TCTTGGAAGAGGTCTGATTT+GGG | - | chr4_4:70679967-70679986 | Msa0699890:intron | 40.0% | |
| GTCTCTAGTGCTATCATTCT+TGG | - | chr4_4:70679989-70680008 | Msa0699890:intron | 40.0% | |
| ! | GTGTGTGCTATTATTACGCT+AGG | + | chr4_4:70680329-70680348 | None:intergenic | 40.0% |
| TGATGAGCTTGAAAGAACCA+TGG | - | chr4_4:70680531-70680550 | Msa0699890:CDS | 40.0% | |
| TGACCATGTTGTCACAGAAT+GGG | - | chr4_4:70680591-70680610 | Msa0699890:CDS | 40.0% | |
| CATAACCTTGGAGCAATTCT+TGG | + | chr4_4:70680622-70680641 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_4:70681413-70681432 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4_4:70681551-70681570 | Msa0699890:intron | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | + | chr4_4:70681767-70681786 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | - | chr4_4:70681764-70681783 | Msa0699890:intron | 40.0% |
| !! | GGTATTGGTCCCTGTAAAAT+AGG | + | chr4_4:70683417-70683436 | None:intergenic | 40.0% |
| !!! | CATAGCATCTTTGGTTTTGG+AGG | - | chr4_4:70683900-70683919 | Msa0699890:intron | 40.0% |
| ! | CATTGTATTTTACGCTCCTC+AGG | - | chr4_4:70683963-70683982 | Msa0699890:intron | 40.0% |
| ! | GGCAATTTTTGCTTGGCAAT+TGG | + | chr4_4:70684025-70684044 | None:intergenic | 40.0% |
| ! | CATCTTGGGCAATTTTTGCT+TGG | + | chr4_4:70684032-70684051 | None:intergenic | 40.0% |
| CAAGCAAAAATTGCCCAAGA+TGG | - | chr4_4:70684030-70684049 | Msa0699890:intron | 40.0% | |
| GTTTACGACTACTTTGCATC+AGG | - | chr4_4:70684052-70684071 | Msa0699890:intron | 40.0% | |
| TTACGACTACTTTGCATCAG+GGG | - | chr4_4:70684054-70684073 | Msa0699890:intron | 40.0% | |
| GAATCCTGGAGAATGCATTT+CGG | + | chr4_4:70684108-70684127 | None:intergenic | 40.0% | |
| CTTACATCCCTAAGAATTCG+CGG | + | chr4_4:70684227-70684246 | None:intergenic | 40.0% | |
| CGACATTATACATACCTTCG+GGG | + | chr4_4:70684337-70684356 | None:intergenic | 40.0% | |
| ! | TCGTCGATTATTGAACTCGT+TGG | - | chr4_4:70684354-70684373 | Msa0699890:CDS | 40.0% |
| TAGGAGAATATGCTACTGCT+AGG | - | chr4_4:70684622-70684641 | Msa0699890:CDS | 40.0% | |
| AGGAGAATATGCTACTGCTA+GGG | - | chr4_4:70684623-70684642 | Msa0699890:CDS | 40.0% | |
| TGTAACAGACACTATCCTCA+TGG | - | chr4_4:70684769-70684788 | Msa0699890:intron | 40.0% | |
| GTAACAGACACTATCCTCAT+GGG | - | chr4_4:70684770-70684789 | Msa0699890:intron | 40.0% | |
| AGTTGGAAAAAACGAATGCC+GGG | + | chr4_4:70684831-70684850 | None:intergenic | 40.0% | |
| GAGTTGGAAAAAACGAATGC+CGG | + | chr4_4:70684832-70684851 | None:intergenic | 40.0% | |
| TTGCGACAAACACATCAAAG+GGG | + | chr4_4:70684898-70684917 | None:intergenic | 40.0% | |
| CATTGCGACAAACACATCAA+AGG | + | chr4_4:70684900-70684919 | None:intergenic | 40.0% | |
| AAGTGCAATTGCCTTGAAAC+CGG | + | chr4_4:70685327-70685346 | None:intergenic | 40.0% | |
| TTCAACGCCACACATACGAT+TGG | + | chr4_4:70679639-70679658 | None:intergenic | 45.0% | |
| GCAGCATAGCATCATAATGC+AGG | + | chr4_4:70679783-70679802 | None:intergenic | 45.0% | |
| TTGCAGGGACATAGTCAAGT+TGG | + | chr4_4:70679938-70679957 | None:intergenic | 45.0% | |
| CCCTGCAACTATTATGGTCT+TGG | - | chr4_4:70679950-70679969 | Msa0699890:intron | 45.0% | |
| GTCTTGGAAGAGGTCTGATT+TGG | - | chr4_4:70679966-70679985 | Msa0699890:intron | 45.0% | |
| TATTCTGCAGGGCCATCAAA+TGG | + | chr4_4:70680138-70680157 | None:intergenic | 45.0% | |
| TGAATAGGTTGTCCAAGCTG+CGG | - | chr4_4:70680181-70680200 | Msa0699890:CDS | 45.0% | |
| TAAAGACATCTGTCCCTCGA+CGG | + | chr4_4:70680241-70680260 | None:intergenic | 45.0% | |
| TCGAGGGACAGATGTCTTTA+AGG | - | chr4_4:70680241-70680260 | Msa0699890:intron | 45.0% | |
| !! | GACAGATGTCTTTAAGGCAC+TGG | - | chr4_4:70680247-70680266 | Msa0699890:intron | 45.0% |
| TTGTCAGATTGGAAGACCAG+TGG | - | chr4_4:70680450-70680469 | Msa0699890:intron | 45.0% | |
| AAGACCAGTGGTGTTCTCAT+TGG | - | chr4_4:70680462-70680481 | Msa0699890:intron | 45.0% | |
| ! | CCCAAGTACTTTTCTCACAC+CGG | + | chr4_4:70680503-70680522 | None:intergenic | 45.0% |
| !! | CCGGTGTGAGAAAAGTACTT+GGG | - | chr4_4:70680500-70680519 | Msa0699890:intron | 45.0% |
| GAAAGAACCATGGCACTATG+TGG | - | chr4_4:70680541-70680560 | Msa0699890:CDS | 45.0% | |
| ATGTGGTTGCCGTTCACTTA+AGG | - | chr4_4:70680558-70680577 | Msa0699890:CDS | 45.0% | |
| GTGACCATGTTGTCACAGAA+TGG | - | chr4_4:70680590-70680609 | Msa0699890:CDS | 45.0% | |
| TAGTGTTTGAGCTTGAGGAG+AGG | - | chr4_4:70680653-70680672 | Msa0699890:intron | 45.0% | |
| AGTGTTTGAGCTTGAGGAGA+GGG | - | chr4_4:70680654-70680673 | Msa0699890:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_4:70681414-70681433 | None:intergenic | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_4:70681754-70681773 | Msa0699890:intron | 45.0% |
| CACGCACCTTTGAATTGAAG+AGG | + | chr4_4:70683567-70683586 | None:intergenic | 45.0% | |
| !!! | TCTTTGGTTTTGGAGGGAAG+TGG | - | chr4_4:70683907-70683926 | Msa0699890:intron | 45.0% |
| ! | TTTTACGCTCCTCAGGAAGA+TGG | - | chr4_4:70683970-70683989 | Msa0699890:intron | 45.0% |
| AGAACCGAAATGCATTCTCC+AGG | - | chr4_4:70684101-70684120 | Msa0699890:intron | 45.0% | |
| GTAGGGAGATTACAGAATCC+TGG | + | chr4_4:70684122-70684141 | None:intergenic | 45.0% | |
| GCTGTAGGAGCAATCATGAT+AGG | + | chr4_4:70684296-70684315 | None:intergenic | 45.0% | |
| TCCTACAGCCATGCAAAAGA+TGG | - | chr4_4:70684307-70684326 | Msa0699890:CDS | 45.0% | |
| AACTTCCTCAACACTGGAAG+TGG | + | chr4_4:70684796-70684815 | None:intergenic | 45.0% | |
| TGAAGCAACTTCCTCAACAC+TGG | + | chr4_4:70684802-70684821 | None:intergenic | 45.0% | |
| GTTGAGGAAGTTGCTTCAAC+AGG | - | chr4_4:70684804-70684823 | Msa0699890:intron | 45.0% | |
| GTGAAAAGAGCTGAATCTGC+CGG | - | chr4_4:70685305-70685324 | Msa0699890:CDS | 45.0% | |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | - | chr4_4:70681923-70681942 | Msa0699890:intron | 5.0% |
| !! | ATAAAAAAATAAAAAAATTC+TGG | - | chr4_4:70681979-70681998 | Msa0699890:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr4_4:70682020-70682039 | Msa0699890:intron | 5.0% |
| !! | TAAAAAATATTAAAAAATTC+TGG | - | chr4_4:70682069-70682088 | Msa0699890:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr4_4:70682020-70682039 | Msa0699890:intron | 5.0% |
| !! | TAAAAAAAATTAAAAAATTC+TGG | + | chr4_4:70683077-70683096 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr4_4:70682020-70682039 | None:intergenic | 5.0% |
| !! | AAAAATATATTAAAAAATTC+TGG | + | chr4_4:70683205-70683224 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr4_4:70682020-70682039 | None:intergenic | 5.0% |
| !!! | ATTTTTTTATTATATAATTG+GGG | - | chr4_4:70683277-70683296 | Msa0699890:intron | 5.0% |
| ! | GCTCGGTTAGCTATACAAGC+TGG | - | chr4_4:70679876-70679895 | Msa0699890:intron | 50.0% |
| GCTATACAAGCTGGAGTTGC+TGG | - | chr4_4:70679885-70679904 | Msa0699890:intron | 50.0% | |
| !! | GTCTTTAAGGCACTGGCTCT+TGG | - | chr4_4:70680254-70680273 | Msa0699890:intron | 50.0% |
| GTGTTCTCATTGGCAGCTGA+TGG | - | chr4_4:70680472-70680491 | Msa0699890:intron | 50.0% | |
| !! | GCCGGTGTGAGAAAAGTACT+TGG | - | chr4_4:70680499-70680518 | Msa0699890:intron | 50.0% |
| GGTCCCATTCTGTGACAACA+TGG | + | chr4_4:70680597-70680616 | None:intergenic | 50.0% | |
| ACCTTGGAGCAATTCTTGGG+CGG | + | chr4_4:70680618-70680637 | None:intergenic | 50.0% | |
| GTGTTTGAGCTTGAGGAGAG+GGG | - | chr4_4:70680655-70680674 | Msa0699890:intron | 50.0% | |
| TGTTTGAGCTTGAGGAGAGG+GGG | - | chr4_4:70680656-70680675 | Msa0699890:intron | 50.0% | |
| CATCAGGGGCAGAAGATCAA+TGG | - | chr4_4:70684068-70684087 | Msa0699890:intron | 50.0% | |
| GTTCAGGCCGCGAATTCTTA+GGG | - | chr4_4:70684217-70684236 | Msa0699890:CDS | 50.0% | |
| ! | GCCATCTTTTGCATGGCTGT+AGG | + | chr4_4:70684311-70684330 | None:intergenic | 50.0% |
| ATCAGCAGCTGGCACAATCA+TGG | - | chr4_4:70684650-70684669 | Msa0699890:intron | 50.0% | |
| GAAGTTGCTTCAACAGGACC+CGG | - | chr4_4:70684810-70684829 | Msa0699890:intron | 50.0% | |
| !! | AGCTGAATCTGCCGGTTTCA+AGG | - | chr4_4:70685313-70685332 | Msa0699890:CDS | 50.0% |
| CAAGGCAATTGCACTTACCG+TGG | - | chr4_4:70685331-70685350 | Msa0699890:CDS | 50.0% | |
| TAGGTTGTCCAAGCTGCGGA+AGG | - | chr4_4:70680185-70680204 | Msa0699890:CDS | 55.0% | |
| GAACTCTTCCTTCCGCAGCT+TGG | + | chr4_4:70680196-70680215 | None:intergenic | 55.0% | |
| GCTGCCAATGAGAACACCAC+TGG | + | chr4_4:70680469-70680488 | None:intergenic | 55.0% | |
| ! | TTGGCAGCTGATGGTGAAGC+CGG | - | chr4_4:70680481-70680500 | Msa0699890:intron | 55.0% |
| ACGGCAACCACATAGTGCCA+TGG | + | chr4_4:70680551-70680570 | None:intergenic | 55.0% | |
| ACCGCCCAAGAATTGCTCCA+AGG | - | chr4_4:70680614-70680633 | Msa0699890:intron | 55.0% | |
| GGTTCAGGCCGCGAATTCTT+AGG | - | chr4_4:70684216-70684235 | Msa0699890:CDS | 55.0% | |
| ! | GGGGTGAGCCATCTTTTGCA+TGG | + | chr4_4:70684318-70684337 | None:intergenic | 55.0% |
| CAAAAGATGGCTCACCCCGA+AGG | - | chr4_4:70684320-70684339 | Msa0699890:CDS | 55.0% | |
| AACACTGGAAGTGGCCCATG+AGG | + | chr4_4:70684787-70684806 | None:intergenic | 55.0% | |
| ATGGGCCACTTCCAGTGTTG+AGG | - | chr4_4:70684788-70684807 | Msa0699890:intron | 55.0% | |
| ! | AAGTTGGCGAGCACCGTGGT+TGG | + | chr4_4:70679922-70679941 | None:intergenic | 60.0% |
| !! | AGTCAAGTTGGCGAGCACCG+TGG | + | chr4_4:70679926-70679945 | None:intergenic | 60.0% |
| !! | ATGGATGGTGGAGTCCGTCG+AGG | - | chr4_4:70680224-70680243 | Msa0699890:intron | 60.0% |
| !! | TGGATGGTGGAGTCCGTCGA+GGG | - | chr4_4:70680225-70680244 | Msa0699890:intron | 60.0% |
| !! | GCACTGGCTCTTGGAGCATC+TGG | - | chr4_4:70680263-70680282 | Msa0699890:intron | 60.0% |
| GCTAGGGCAGCATCAGCAGC+TGG | - | chr4_4:70684639-70684658 | Msa0699890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70679484 | 70685364 | 70679484 | ID=Msa0699890;Name=Msa0699890 |
| chr4_4 | mRNA | 70679484 | 70685364 | 70679484 | ID=Msa0699890-mRNA-1;Parent=Msa0699890;Name=Msa0699890-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.62|0.55|1|1|1|9|0|314 |
| chr4_4 | exon | 70679484 | 70679576 | 70679484 | ID=Msa0699890-mRNA-1:exon:21407;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70679994 | 70680071 | 70679994 | ID=Msa0699890-mRNA-1:exon:21406;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70680177 | 70680223 | 70680177 | ID=Msa0699890-mRNA-1:exon:21405;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70680507 | 70680631 | 70680507 | ID=Msa0699890-mRNA-1:exon:21404;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70680720 | 70680863 | 70680720 | ID=Msa0699890-mRNA-1:exon:21403;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70684213 | 70684391 | 70684213 | ID=Msa0699890-mRNA-1:exon:21402;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70684556 | 70684660 | 70684556 | ID=Msa0699890-mRNA-1:exon:21401;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70684871 | 70684971 | 70684871 | ID=Msa0699890-mRNA-1:exon:21400;Parent=Msa0699890-mRNA-1 |
| chr4_4 | exon | 70685295 | 70685364 | 70685295 | ID=Msa0699890-mRNA-1:exon:21399;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70685295 | 70685364 | 70685295 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70684871 | 70684971 | 70684871 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70684556 | 70684660 | 70684556 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70684213 | 70684391 | 70684213 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70680720 | 70680863 | 70680720 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70680507 | 70680631 | 70680507 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70680177 | 70680223 | 70680177 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70679994 | 70680071 | 70679994 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| chr4_4 | CDS | 70679484 | 70679576 | 70679484 | ID=Msa0699890-mRNA-1:cds;Parent=Msa0699890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
