Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481100 | XP_013458264.1 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481100 | sp|Q9M7Z1|ODB2_ARATH | 61.488 | 457 | 141 | 5 | 64 | 520 | 62 | 483 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481100 | A0A072V2G4 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 995 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0083240 | Msa0481100 | 0.804396 | 2.204367e-49 | -8.615850e-47 |
| Msa0093740 | Msa0481100 | 0.801502 | 8.735566e-49 | -8.615850e-47 |
| Msa0129640 | Msa0481100 | 0.815717 | 8.012608e-52 | -8.615850e-47 |
| Msa0143630 | Msa0481100 | 0.856859 | 2.419333e-62 | -8.615850e-47 |
| Msa0182020 | Msa0481100 | 0.813995 | 1.930010e-51 | -8.615850e-47 |
| Msa0368670 | Msa0481100 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
| Msa0374790 | Msa0481100 | 0.885987 | 5.060435e-72 | -8.615850e-47 |
| Msa0381470 | Msa0481100 | 0.841834 | 3.735714e-58 | -8.615850e-47 |
| Msa0424000 | Msa0481100 | 0.871299 | 7.599162e-67 | -8.615850e-47 |
| Msa0458220 | Msa0481100 | 0.823458 | 1.370154e-53 | -8.615850e-47 |
| Msa0470920 | Msa0481100 | 0.881412 | 2.453310e-70 | -8.615850e-47 |
| Msa0476070 | Msa0481100 | 0.890013 | 1.445879e-73 | -8.615850e-47 |
| Msa0480770 | Msa0481100 | 0.805287 | 1.435506e-49 | -8.615850e-47 |
| Msa0481100 | Msa0504700 | 0.825159 | 5.458224e-54 | -8.615850e-47 |
| Msa0481100 | Msa0519910 | 0.857818 | 1.259604e-62 | -8.615850e-47 |
| Msa0481100 | Msa0547440 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0481100 | Msa0577370 | 0.836745 | 7.813663e-57 | -8.615850e-47 |
| Msa0481100 | Msa0580850 | 0.862987 | 3.431521e-64 | -8.615850e-47 |
| Msa0481100 | Msa0602180 | 0.857353 | 1.729887e-62 | -8.615850e-47 |
| Msa0481100 | Msa0609420 | 0.801928 | 7.141784e-49 | -8.615850e-47 |
| Msa0481100 | Msa0613800 | 0.844220 | 8.650138e-59 | -8.615850e-47 |
| Msa0481100 | Msa0617040 | 0.853329 | 2.568550e-61 | -8.615850e-47 |
| Msa0481100 | Msa0643520 | 0.837713 | 4.419613e-57 | -8.615850e-47 |
| Msa0481100 | Msa0650060 | 0.805345 | 1.396471e-49 | -8.615850e-47 |
| Msa0481100 | Msa0652700 | 0.813177 | 2.920234e-51 | -8.615850e-47 |
| Msa0481100 | Msa0656100 | 0.853660 | 2.063341e-61 | -8.615850e-47 |
| Msa0481100 | Msa0683000 | 0.826527 | 2.582827e-54 | -8.615850e-47 |
| Msa0481100 | Msa0683030 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0481100 | Msa0688610 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa0481100 | Msa0699890 | 0.805204 | 1.494338e-49 | -8.615850e-47 |
| Msa0481100 | Msa0945230 | 0.802188 | 6.316575e-49 | -8.615850e-47 |
| Msa0481100 | Msa0982380 | 0.881307 | 2.675624e-70 | -8.615850e-47 |
| Msa0481100 | Msa1071420 | 0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0481100 | Msa1211600 | 0.862464 | 4.976976e-64 | -8.615850e-47 |
| Msa0481100 | Msa1217950 | 0.997617 | 7.782049e-246 | -8.615850e-47 |
| Msa0481100 | Msa1219790 | 0.875714 | 2.477795e-68 | -8.615850e-47 |
| Msa0481100 | Msa1267080 | 0.868562 | 5.955197e-66 | -8.615850e-47 |
| Msa0481100 | Msa1339870 | 0.851530 | 8.357638e-61 | -8.615850e-47 |
| Msa0481100 | Msa1401550 | 0.878069 | 3.781950e-69 | -8.615850e-47 |
| Msa0481100 | Msa1412410 | 0.814137 | 1.795854e-51 | -8.615850e-47 |
| Msa0481100 | Msa1427860 | 0.812612 | 3.883656e-51 | -8.615850e-47 |
| Msa0481100 | Msa1462640 | 0.893434 | 6.307337e-75 | -8.615850e-47 |
| Msa0268070 | Msa0481100 | 0.872135 | 4.012839e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481100 | MtrunA17_Chr4g0067561 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 995 |
| Msa0481100 | MtrunA17_Chr8g0343061 | 26.509 | 464 | 294 | 15 | 71 | 517 | 110 | 543 | 2.58e-36 | 141 |
| Msa0481100 | MtrunA17_Chr1g0197901 | 26.923 | 416 | 277 | 9 | 94 | 503 | 217 | 611 | 2.69e-32 | 130 |
| Msa0481100 | MtrunA17_Chr1g0210021 | 28.538 | 431 | 286 | 8 | 89 | 517 | 60 | 470 | 6.77e-30 | 122 |
| Msa0481100 | MtrunA17_Chr1g0200441 | 25.664 | 452 | 271 | 8 | 89 | 517 | 48 | 457 | 3.04e-25 | 108 |
| Msa0481100 | MtrunA17_Chr5g0444531 | 31.797 | 217 | 141 | 4 | 304 | 519 | 245 | 455 | 5.54e-23 | 101 |
| Msa0481100 | MtrunA17_Chr2g0277631 | 32.367 | 207 | 133 | 4 | 314 | 519 | 253 | 453 | 6.56e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481100 | AT3G06850.1 | 61.488 | 457 | 141 | 5 | 64 | 520 | 62 | 483 | 0.0 | 549 |
| Msa0481100 | AT3G06850.2 | 61.488 | 457 | 141 | 5 | 64 | 520 | 62 | 483 | 0.0 | 549 |
| Msa0481100 | AT3G13930.1 | 27.664 | 488 | 291 | 20 | 52 | 517 | 92 | 539 | 5.69e-37 | 144 |
| Msa0481100 | AT1G54220.1 | 27.468 | 466 | 286 | 17 | 71 | 517 | 107 | 539 | 8.73e-37 | 143 |
| Msa0481100 | AT1G54220.2 | 27.468 | 466 | 286 | 17 | 71 | 517 | 107 | 539 | 8.73e-37 | 143 |
| Msa0481100 | AT3G25860.1 | 27.273 | 429 | 297 | 7 | 89 | 517 | 67 | 480 | 1.23e-31 | 127 |
| Msa0481100 | AT3G52200.2 | 27.586 | 464 | 298 | 14 | 65 | 517 | 277 | 713 | 8.95e-31 | 127 |
| Msa0481100 | AT3G52200.1 | 27.586 | 464 | 298 | 14 | 65 | 517 | 201 | 637 | 1.01e-30 | 126 |
| Msa0481100 | AT4G26910.3 | 30.882 | 204 | 135 | 4 | 318 | 519 | 166 | 365 | 1.70e-22 | 99.8 |
| Msa0481100 | AT1G34430.1 | 24.945 | 457 | 273 | 10 | 89 | 517 | 51 | 465 | 4.90e-22 | 99.4 |
| Msa0481100 | AT4G26910.2 | 30.882 | 204 | 135 | 4 | 318 | 519 | 264 | 463 | 5.86e-22 | 99.4 |
| Msa0481100 | AT4G26910.1 | 30.882 | 204 | 135 | 4 | 318 | 519 | 265 | 464 | 6.58e-22 | 99.0 |
| Msa0481100 | AT5G55070.1 | 29.268 | 205 | 137 | 4 | 318 | 519 | 265 | 464 | 9.76e-22 | 98.6 |
| Msa0481100 | AT5G55070.2 | 29.268 | 205 | 137 | 4 | 318 | 519 | 265 | 464 | 9.76e-22 | 98.6 |
Find 125 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATCAATATCTTTAAT+AGG | 0.158985 | 3_3:+86852647 | None:intergenic |
| GCTTCTGATACTTTCTCTTC+TGG | 0.171796 | 3_3:-86853921 | Msa0481100:CDS |
| CACTTGTTGTAATTGTAATT+TGG | 0.230394 | 3_3:-86850258 | Msa0481100:three_prime_UTR |
| TTCTGCTTTCAGGTTAATAT+TGG | 0.251725 | 3_3:-86850401 | Msa0481100:intron |
| GCATGTCCTTCAACGACTTT+TGG | 0.265879 | 3_3:-86852619 | Msa0481100:CDS |
| GATAGTGATTTGATTAATAT+TGG | 0.276182 | 3_3:+86851507 | None:intergenic |
| CTTCTGATACTTTCTCTTCT+GGG | 0.279666 | 3_3:-86853920 | Msa0481100:CDS |
| AAGAACCTAGATTCTGATAT+TGG | 0.299664 | 3_3:-86852502 | Msa0481100:CDS |
| TGTTCAGTCTCTTTCCATAT+TGG | 0.313546 | 3_3:-86850946 | Msa0481100:CDS |
| TTGCAACCTTGCTAGCTCTT+TGG | 0.320425 | 3_3:+86850837 | None:intergenic |
| GAAATGAAATTTGATTATAA+AGG | 0.325390 | 3_3:-86850282 | Msa0481100:exon |
| GAAATGGGTCATCATGGAAT+TGG | 0.328209 | 3_3:+86854245 | None:intergenic |
| ACTCACATCTATGCGAGAAT+TGG | 0.328308 | 3_3:+86853845 | None:intergenic |
| GGAGCAATTGGTGGAAAGTT+TGG | 0.330607 | 3_3:-86850745 | Msa0481100:CDS |
| ATCAATCAATATCTTTAATA+GGG | 0.338754 | 3_3:+86852648 | None:intergenic |
| CCTTTCCAATATCAGAATCT+AGG | 0.343004 | 3_3:+86852497 | None:intergenic |
| GCAGACTCATTAACAAATAT+CGG | 0.359920 | 3_3:+86852562 | None:intergenic |
| TTGTAAGCTAACCTCCAATA+TGG | 0.365880 | 3_3:+86850932 | None:intergenic |
| GTTTAATTTGAAGCATGTTA+AGG | 0.370799 | 3_3:-86853735 | Msa0481100:CDS |
| TTTAATTTGAAGCATGTTAA+GGG | 0.383188 | 3_3:-86853734 | Msa0481100:CDS |
| TCTATGCGAGAATTGGGTTT+AGG | 0.384431 | 3_3:+86853852 | None:intergenic |
| TTGAGTAACATTGGAGCAAT+TGG | 0.387705 | 3_3:-86850757 | Msa0481100:CDS |
| AATGTTGTGAAGATGAAAAC+AGG | 0.392284 | 3_3:+86854088 | None:intergenic |
| CTCACATCTATGCGAGAATT+GGG | 0.394779 | 3_3:+86853846 | None:intergenic |
| ACAAATATCGGATCAGAATC+AGG | 0.396904 | 3_3:+86852574 | None:intergenic |
| GCTAGCAAGGTTGCAACAAT+TGG | 0.405113 | 3_3:-86850830 | Msa0481100:CDS |
| GTGTGCTTGACATCTGTATA+AGG | 0.405584 | 3_3:+86851537 | None:intergenic |
| ATAAATGAAGTCTGTGGAAC+TGG | 0.409549 | 3_3:-86852409 | Msa0481100:CDS |
| TGAAAAGAAGAAGAGACGTT+TGG | 0.410986 | 3_3:+86854117 | None:intergenic |
| GTGTTGGTTCAAACTTGAAA+TGG | 0.418878 | 3_3:+86854229 | None:intergenic |
| TCTAATATTCTGCATGGTCC+TGG | 0.430904 | 3_3:-86853397 | Msa0481100:CDS |
| CAGAGAGACGGAACAATCTC+TGG | 0.430992 | 3_3:+86853943 | None:intergenic |
| CTAGATTCTGATATTGGAAA+GGG | 0.446737 | 3_3:-86852496 | Msa0481100:CDS |
| GTTCCGCGGTTTACTGATGA+TGG | 0.454464 | 3_3:-86850664 | Msa0481100:CDS |
| GAACATAGTTGATGTCCCTT+TGG | 0.467551 | 3_3:-86853669 | Msa0481100:CDS |
| CCCGCAGGAATGTCCAAAAC+AGG | 0.470687 | 3_3:+86853692 | None:intergenic |
| TCAGTCTCTTTCCATATTGG+AGG | 0.472091 | 3_3:-86850943 | Msa0481100:intron |
| ATTAATCAAATCACTATCAA+TGG | 0.476267 | 3_3:-86851502 | Msa0481100:CDS |
| TGAAACAGAGGAATGGTAAG+AGG | 0.476672 | 3_3:+86853890 | None:intergenic |
| CATGGCAATAATAGCGACTT+CGG | 0.479321 | 3_3:+86850702 | None:intergenic |
| TTCTATCAACACCTGCTGTA+AGG | 0.481563 | 3_3:-86852459 | Msa0481100:CDS |
| CAGAATGTGAACTTCTCAAA+TGG | 0.481857 | 3_3:-86853625 | Msa0481100:CDS |
| TGTTGGTTCAAACTTGAAAT+GGG | 0.482418 | 3_3:+86854230 | None:intergenic |
| GTGATTTGATTAATATTGGA+AGG | 0.487863 | 3_3:+86851511 | None:intergenic |
| CGTAGATCAAAGCTCTTCTC+TGG | 0.489884 | 3_3:+86853967 | None:intergenic |
| GAACAGCTTCAGGGAGAAGA+AGG | 0.492134 | 3_3:-86852289 | Msa0481100:CDS |
| GATGGTAAAATCAATGTCTC+TGG | 0.493206 | 3_3:-86851646 | Msa0481100:CDS |
| CGAAGTCGCTATTATTGCCA+TGG | 0.495773 | 3_3:-86850701 | Msa0481100:CDS |
| CAGAGAAGAGCTTTGATCTA+CGG | 0.496230 | 3_3:-86853966 | Msa0481100:CDS |
| AAATGCAACACGAGTAACTC+TGG | 0.496358 | 3_3:+86850305 | None:intergenic |
| AGTAACATTGGAGCAATTGG+TGG | 0.496532 | 3_3:-86850754 | Msa0481100:CDS |
| CTTACAGTCATGAGTGATGC+AGG | 0.500515 | 3_3:+86850631 | None:intergenic |
| GTCTGTGGAACTGGAAAAGA+TGG | 0.501093 | 3_3:-86852400 | Msa0481100:CDS |
| AAATGGGTCATCATGGAATT+GGG | 0.506371 | 3_3:+86854246 | None:intergenic |
| AAACTTGAAATGGGTCATCA+TGG | 0.509162 | 3_3:+86854239 | None:intergenic |
| AGGACACGATACTTCCCCTT+AGG | 0.518232 | 3_3:-86852225 | Msa0481100:intron |
| ATTGGAAAGGGGAAACAAGC+AGG | 0.518536 | 3_3:-86852484 | Msa0481100:CDS |
| GAGTCACCAAAAGTCGTTGA+AGG | 0.519561 | 3_3:+86852613 | None:intergenic |
| TTTGCTAGACTCCTTACAGC+AGG | 0.524775 | 3_3:+86852448 | None:intergenic |
| CAGCATCTTTGCAACGATCA+AGG | 0.527238 | 3_3:+86854004 | None:intergenic |
| CCTTCACCAGTCTGTGCCAA+AGG | 0.527839 | 3_3:+86853653 | None:intergenic |
| ACAATCACTTTGAGTAACAT+TGG | 0.529629 | 3_3:-86850766 | Msa0481100:CDS |
| TCGTCTACATAATGAAAATG+TGG | 0.538797 | 3_3:+86851612 | None:intergenic |
| AACTTTCTGAATTCGTCCCA+TGG | 0.543863 | 3_3:+86850684 | None:intergenic |
| GATGTCCCTTTGGCACAGAC+TGG | 0.544553 | 3_3:-86853659 | Msa0481100:CDS |
| GATATAGGTTCACACAACAT+TGG | 0.546419 | 3_3:-86851017 | Msa0481100:intron |
| TCAGCATGCAAAACAGCAGA+TGG | 0.547317 | 3_3:+86852319 | None:intergenic |
| CTTCGGGCAGATTAAGAAGT+GGG | 0.553966 | 3_3:+86850719 | None:intergenic |
| CTCTTCTCTGGCAAATCCGA+CGG | 0.558331 | 3_3:+86853979 | None:intergenic |
| CCTAGATTCTGATATTGGAA+AGG | 0.561871 | 3_3:-86852497 | Msa0481100:CDS |
| TTGAAGCAACTGTTCACAGA+GGG | 0.564727 | 3_3:+86851465 | None:intergenic |
| CATGCTGACAAGATGCTGAC+TGG | 0.565296 | 3_3:+86854196 | None:intergenic |
| TGGTGCAGATCACAGAGTCT+TGG | 0.566093 | 3_3:-86850381 | Msa0481100:CDS |
| AAAGTTTCTAATATTCTGCA+TGG | 0.567191 | 3_3:-86853403 | Msa0481100:CDS |
| TGGTCCTGGCGACATTGTAA+AGG | 0.569108 | 3_3:-86853383 | Msa0481100:intron |
| CGTCTACATAATGAAAATGT+GGG | 0.571160 | 3_3:+86851613 | None:intergenic |
| ATGGCAATAATAGCGACTTC+GGG | 0.571293 | 3_3:+86850703 | None:intergenic |
| GCATTTGAAGTCATTCTCAA+AGG | 0.573818 | 3_3:-86851435 | Msa0481100:intron |
| TGTTGTAATTGTAATTTGGA+TGG | 0.574741 | 3_3:-86850254 | Msa0481100:three_prime_UTR |
| CAGAAAAGAGTGTGAAACAG+AGG | 0.575192 | 3_3:+86853878 | None:intergenic |
| GGAAGTATCGTGTCCTCAGA+AGG | 0.575364 | 3_3:+86852232 | None:intergenic |
| AAGAGTGTGAAACAGAGGAA+TGG | 0.575582 | 3_3:+86853883 | None:intergenic |
| TCTCAAATGGTATGTTCAAG+AGG | 0.575641 | 3_3:-86853612 | Msa0481100:intron |
| AGATAACCAAAGAGCTAGCA+AGG | 0.577207 | 3_3:-86850843 | Msa0481100:CDS |
| CCTTTGGCACAGACTGGTGA+AGG | 0.578468 | 3_3:-86853653 | Msa0481100:CDS |
| CGAGATAAATTGTGATGCCC+TGG | 0.580086 | 3_3:-86851592 | Msa0481100:CDS |
| ACACAACATTGGAATTGCGA+TGG | 0.580817 | 3_3:-86851006 | Msa0481100:CDS |
| GGGTCATCATGGAATTGGGA+TGG | 0.582341 | 3_3:+86854250 | None:intergenic |
| CTGACCTTTACAATGTCGCC+AGG | 0.582365 | 3_3:+86853379 | None:intergenic |
| CTTCACCAGTCTGTGCCAAA+GGG | 0.584387 | 3_3:+86853654 | None:intergenic |
| AAAGTCGTTGAAGGACATGC+AGG | 0.586041 | 3_3:+86852622 | None:intergenic |
| GGAATTGGGATGGATAGATA+AGG | 0.593731 | 3_3:+86854260 | None:intergenic |
| GACTGGTAATAATGTCGTGT+TGG | 0.602714 | 3_3:+86854213 | None:intergenic |
| TGCTGTAAGGAGTCTAGCAA+AGG | 0.604062 | 3_3:-86852446 | Msa0481100:CDS |
| GTGGAACTGGAAAAGATGGA+AGG | 0.606888 | 3_3:-86852396 | Msa0481100:CDS |
| AAGTATCAGAAGCAGAGAGA+CGG | 0.607124 | 3_3:+86853931 | None:intergenic |
| GAAATTACGAGTCGCTACAA+AGG | 0.607197 | 3_3:-86853427 | Msa0481100:CDS |
| TAAATATGATAGGCCTTCTG+AGG | 0.608948 | 3_3:-86852245 | Msa0481100:CDS |
| AGATAACAAGTTAAGTTCCG+AGG | 0.612106 | 3_3:-86850803 | Msa0481100:CDS |
| TAGGGGATTCCAAAGAGCGA+TGG | 0.612443 | 3_3:-86851664 | Msa0481100:CDS |
| ATTGCGATGGCAACACCACA+TGG | 0.613596 | 3_3:-86850993 | Msa0481100:CDS |
| TGTCCCACCACATATATCCT+CGG | 0.616968 | 3_3:+86850786 | None:intergenic |
| TTGCAAAGATGCTGAGCCGT+CGG | 0.617666 | 3_3:-86853995 | Msa0481100:exon |
| ACATCAACTATGTTCCCCGC+AGG | 0.619962 | 3_3:+86853677 | None:intergenic |
| AGTTCCGAGGATATATGTGG+TGG | 0.621140 | 3_3:-86850790 | Msa0481100:CDS |
| TGGAACTGGAAAAGATGGAA+GGG | 0.622696 | 3_3:-86852395 | Msa0481100:CDS |
| AACAGAGGAATGGTAAGAGG+AGG | 0.629775 | 3_3:+86853893 | None:intergenic |
| GAAGTCGCTATTATTGCCAT+GGG | 0.630735 | 3_3:-86850700 | Msa0481100:CDS |
| AGGAGTCTAGCAAAGGAGCA+TGG | 0.638124 | 3_3:-86852439 | Msa0481100:CDS |
| TTAAGTTCCGAGGATATATG+TGG | 0.641666 | 3_3:-86850793 | Msa0481100:CDS |
| TAGATTCTGATATTGGAAAG+GGG | 0.643991 | 3_3:-86852495 | Msa0481100:CDS |
| GATAAATTGTGATGCCCTGG+TGG | 0.644594 | 3_3:-86851589 | Msa0481100:CDS |
| ACTTCGGGCAGATTAAGAAG+TGG | 0.658043 | 3_3:+86850718 | None:intergenic |
| ATGTTGTGAAGATGAAAACA+GGG | 0.659916 | 3_3:+86854089 | None:intergenic |
| TCACTTTGAACTTCACAGAG+TGG | 0.663462 | 3_3:+86853463 | None:intergenic |
| ATTGATATAAATGAAGTCTG+TGG | 0.663799 | 3_3:-86852415 | Msa0481100:CDS |
| GTTCCGAGGATATATGTGGT+GGG | 0.671805 | 3_3:-86850789 | Msa0481100:CDS |
| GCAGATCACAGAGTCTTGGA+CGG | 0.673432 | 3_3:-86850377 | Msa0481100:CDS |
| TGTTGTGAAGATGAAAACAG+GGG | 0.686973 | 3_3:+86854090 | None:intergenic |
| TTCGGGCAGATTAAGAAGTG+GGG | 0.687430 | 3_3:+86850720 | None:intergenic |
| TGAAGCAACTGTTCACAGAG+GGG | 0.688487 | 3_3:+86851466 | None:intergenic |
| TTTGAAGCAACTGTTCACAG+AGG | 0.709921 | 3_3:+86851464 | None:intergenic |
| TTCGGCACAACTAGACCATG+TGG | 0.711530 | 3_3:+86850978 | None:intergenic |
| GACGAATTCAGAAAGTTCCG+CGG | 0.713834 | 3_3:-86850678 | Msa0481100:CDS |
| TTTCCATCATCAGTAAACCG+CGG | 0.759381 | 3_3:+86850661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGATTTATTATGTTATTT+TGG | - | chr3_3:86850966-86850985 | Msa0481100:CDS | 10.0% |
| !! | TTATAAATTTAGAAATTAGT+AGG | - | chr3_3:86851178-86851197 | Msa0481100:intron | 10.0% |
| !! | TATAAATTTAGAAATTAGTA+GGG | - | chr3_3:86851179-86851198 | Msa0481100:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | - | chr3_3:86852490-86852509 | Msa0481100:CDS | 10.0% |
| !!! | AAAATATTCTTTAAAAATCA+TGG | - | chr3_3:86853200-86853219 | Msa0481100:intron | 10.0% |
| !!! | TAATTTATTTTTTATCATCA+TGG | + | chr3_3:86854267-86854286 | None:intergenic | 10.0% |
| !!! | AATGATTTATTATGTTATTT+TGG | - | chr3_3:86850966-86850985 | Msa0481100:CDS | 10.0% |
| !! | TTATAAATTTAGAAATTAGT+AGG | - | chr3_3:86851178-86851197 | Msa0481100:intron | 10.0% |
| !! | TATAAATTTAGAAATTAGTA+GGG | - | chr3_3:86851179-86851198 | Msa0481100:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | - | chr3_3:86852490-86852509 | Msa0481100:CDS | 10.0% |
| !!! | AAAATATTCTTTAAAAATCA+TGG | - | chr3_3:86853200-86853219 | Msa0481100:intron | 10.0% |
| !!! | TAATTTATTTTTTATCATCA+TGG | + | chr3_3:86854267-86854286 | None:intergenic | 10.0% |
| !!! | ATTTATTATGTTATTTTGGT+AGG | - | chr3_3:86850970-86850989 | Msa0481100:CDS | 15.0% |
| !!! | TTTATTATGTTATTTTGGTA+GGG | - | chr3_3:86850971-86850990 | Msa0481100:CDS | 15.0% |
| !! | CCTATTTATACTTATAATTT+GGG | + | chr3_3:86851657-86851676 | None:intergenic | 15.0% |
| !! | TCCTATTTATACTTATAATT+TGG | + | chr3_3:86851658-86851677 | None:intergenic | 15.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | + | chr3_3:86851834-86851853 | None:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | + | chr3_3:86852545-86852564 | None:intergenic | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | + | chr3_3:86853921-86853940 | None:intergenic | 15.0% |
| !! | GAAATGAAATTTGATTATAA+AGG | - | chr3_3:86854197-86854216 | Msa0481100:five_prime_UTR | 15.0% |
| !!! | ATTTATTATGTTATTTTGGT+AGG | - | chr3_3:86850970-86850989 | Msa0481100:CDS | 15.0% |
| !!! | TTTATTATGTTATTTTGGTA+GGG | - | chr3_3:86850971-86850990 | Msa0481100:CDS | 15.0% |
| !! | CCTATTTATACTTATAATTT+GGG | + | chr3_3:86851657-86851676 | None:intergenic | 15.0% |
| !! | TCCTATTTATACTTATAATT+TGG | + | chr3_3:86851658-86851677 | None:intergenic | 15.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | + | chr3_3:86851834-86851853 | None:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | + | chr3_3:86852545-86852564 | None:intergenic | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | + | chr3_3:86853921-86853940 | None:intergenic | 15.0% |
| !! | GAAATGAAATTTGATTATAA+AGG | - | chr3_3:86854197-86854216 | Msa0481100:five_prime_UTR | 15.0% |
| !!! | TTTAATTTGAAGCATGTTAA+GGG | - | chr3_3:86850745-86850764 | Msa0481100:CDS | 20.0% |
| !!! | TTATTATGTTATTTTGGTAG+GGG | - | chr3_3:86850972-86850991 | Msa0481100:CDS | 20.0% |
| !!! | TGTATTTTTAAACATGTTTG+AGG | - | chr3_3:86851279-86851298 | Msa0481100:intron | 20.0% |
| !!! | GTATTTTTAAACATGTTTGA+GGG | - | chr3_3:86851280-86851299 | Msa0481100:intron | 20.0% |
| !! | TGTTTATATGGCATTTATTT+GGG | - | chr3_3:86851443-86851462 | Msa0481100:CDS | 20.0% |
| !!! | TTATACTTATAATTTGGGTT+TGG | + | chr3_3:86851652-86851671 | None:intergenic | 20.0% |
| !! | CCCAAATTATAAGTATAAAT+AGG | - | chr3_3:86851654-86851673 | Msa0481100:CDS | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | - | chr3_3:86851786-86851805 | Msa0481100:intron | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | - | chr3_3:86851787-86851806 | Msa0481100:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | + | chr3_3:86851835-86851854 | None:intergenic | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | - | chr3_3:86852224-86852243 | Msa0481100:intron | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | + | chr3_3:86852572-86852591 | None:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | - | chr3_3:86852703-86852722 | Msa0481100:intron | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | + | chr3_3:86852975-86852994 | None:intergenic | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | - | chr3_3:86852977-86852996 | Msa0481100:intron | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | - | chr3_3:86853310-86853329 | Msa0481100:intron | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | + | chr3_3:86853380-86853399 | None:intergenic | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | - | chr3_3:86853386-86853405 | Msa0481100:CDS | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | + | chr3_3:86853428-86853447 | None:intergenic | 20.0% |
| !! | ATCACAATATAAATTTGACA+CGG | - | chr3_3:86853428-86853447 | Msa0481100:CDS | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | + | chr3_3:86853522-86853541 | None:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | - | chr3_3:86853942-86853961 | Msa0481100:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | - | chr3_3:86854017-86854036 | Msa0481100:five_prime_UTR | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | - | chr3_3:86854018-86854037 | Msa0481100:five_prime_UTR | 20.0% |
| !!! | TTTAATTTGAAGCATGTTAA+GGG | - | chr3_3:86850745-86850764 | Msa0481100:CDS | 20.0% |
| !!! | TTATTATGTTATTTTGGTAG+GGG | - | chr3_3:86850972-86850991 | Msa0481100:CDS | 20.0% |
| !!! | TGTATTTTTAAACATGTTTG+AGG | - | chr3_3:86851279-86851298 | Msa0481100:intron | 20.0% |
| !!! | GTATTTTTAAACATGTTTGA+GGG | - | chr3_3:86851280-86851299 | Msa0481100:intron | 20.0% |
| !! | TGTTTATATGGCATTTATTT+GGG | - | chr3_3:86851443-86851462 | Msa0481100:CDS | 20.0% |
| !!! | TTATACTTATAATTTGGGTT+TGG | + | chr3_3:86851652-86851671 | None:intergenic | 20.0% |
| !! | CCCAAATTATAAGTATAAAT+AGG | - | chr3_3:86851654-86851673 | Msa0481100:CDS | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | - | chr3_3:86851786-86851805 | Msa0481100:intron | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | - | chr3_3:86851787-86851806 | Msa0481100:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | + | chr3_3:86851835-86851854 | None:intergenic | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | - | chr3_3:86852224-86852243 | Msa0481100:intron | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | + | chr3_3:86852572-86852591 | None:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | - | chr3_3:86852703-86852722 | Msa0481100:intron | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | + | chr3_3:86852975-86852994 | None:intergenic | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | - | chr3_3:86852977-86852996 | Msa0481100:intron | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | - | chr3_3:86853310-86853329 | Msa0481100:intron | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | + | chr3_3:86853380-86853399 | None:intergenic | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | - | chr3_3:86853386-86853405 | Msa0481100:CDS | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | + | chr3_3:86853428-86853447 | None:intergenic | 20.0% |
| !! | ATCACAATATAAATTTGACA+CGG | - | chr3_3:86853428-86853447 | Msa0481100:CDS | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | + | chr3_3:86853522-86853541 | None:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | - | chr3_3:86853942-86853961 | Msa0481100:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | - | chr3_3:86854017-86854036 | Msa0481100:five_prime_UTR | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | - | chr3_3:86854018-86854037 | Msa0481100:five_prime_UTR | 20.0% |
| !!! | GTTTAATTTGAAGCATGTTA+AGG | - | chr3_3:86850744-86850763 | Msa0481100:CDS | 25.0% |
| !!! | TATTATGTTATTTTGGTAGG+GGG | - | chr3_3:86850973-86850992 | Msa0481100:CDS | 25.0% |
| ! | AAAGTTTCTAATATTCTGCA+TGG | - | chr3_3:86851076-86851095 | Msa0481100:intron | 25.0% |
| ! | GATATGAAATTTCATTCTGT+CGG | - | chr3_3:86851122-86851141 | Msa0481100:intron | 25.0% |
| !! | TTAATAGCAGTGTTGTTAAA+TGG | - | chr3_3:86851312-86851331 | Msa0481100:intron | 25.0% |
| ! | GTGTTTATATGGCATTTATT+TGG | - | chr3_3:86851442-86851461 | Msa0481100:CDS | 25.0% |
| ! | AATAGGAATAATTGTTGAGA+AGG | - | chr3_3:86851671-86851690 | Msa0481100:intron | 25.0% |
| ! | ATTTGATGGAAATAATGCAT+TGG | + | chr3_3:86851770-86851789 | None:intergenic | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | + | chr3_3:86851784-86851803 | None:intergenic | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | - | chr3_3:86852064-86852083 | Msa0481100:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | + | chr3_3:86852272-86852291 | None:intergenic | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | + | chr3_3:86852273-86852292 | None:intergenic | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | + | chr3_3:86852428-86852447 | None:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | - | chr3_3:86852428-86852447 | Msa0481100:CDS | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | + | chr3_3:86852578-86852597 | None:intergenic | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | + | chr3_3:86852628-86852647 | None:intergenic | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | - | chr3_3:86852628-86852647 | Msa0481100:CDS | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | - | chr3_3:86852751-86852770 | Msa0481100:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | - | chr3_3:86852796-86852815 | Msa0481100:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | - | chr3_3:86852797-86852816 | Msa0481100:intron | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | + | chr3_3:86852971-86852990 | None:intergenic | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | - | chr3_3:86853140-86853159 | Msa0481100:intron | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | - | chr3_3:86853152-86853171 | Msa0481100:intron | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | - | chr3_3:86853205-86853224 | Msa0481100:intron | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | + | chr3_3:86853292-86853311 | None:intergenic | 25.0% |
| ! | AAAACCATAAATAACCATAC+AGG | + | chr3_3:86853603-86853622 | None:intergenic | 25.0% |
| !!! | CACTTGTTGTAATTGTAATT+TGG | - | chr3_3:86854221-86854240 | Msa0481100:five_prime_UTR | 25.0% |
| ! | TGTTGTAATTGTAATTTGGA+TGG | - | chr3_3:86854225-86854244 | Msa0481100:five_prime_UTR | 25.0% |
| !!! | GTTTAATTTGAAGCATGTTA+AGG | - | chr3_3:86850744-86850763 | Msa0481100:CDS | 25.0% |
| !!! | TATTATGTTATTTTGGTAGG+GGG | - | chr3_3:86850973-86850992 | Msa0481100:CDS | 25.0% |
| ! | AAAGTTTCTAATATTCTGCA+TGG | - | chr3_3:86851076-86851095 | Msa0481100:intron | 25.0% |
| ! | GATATGAAATTTCATTCTGT+CGG | - | chr3_3:86851122-86851141 | Msa0481100:intron | 25.0% |
| !! | TTAATAGCAGTGTTGTTAAA+TGG | - | chr3_3:86851312-86851331 | Msa0481100:intron | 25.0% |
| ! | GTGTTTATATGGCATTTATT+TGG | - | chr3_3:86851442-86851461 | Msa0481100:CDS | 25.0% |
| ! | AATAGGAATAATTGTTGAGA+AGG | - | chr3_3:86851671-86851690 | Msa0481100:intron | 25.0% |
| ! | ATTTGATGGAAATAATGCAT+TGG | + | chr3_3:86851770-86851789 | None:intergenic | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | + | chr3_3:86851784-86851803 | None:intergenic | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | - | chr3_3:86852064-86852083 | Msa0481100:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | + | chr3_3:86852272-86852291 | None:intergenic | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | + | chr3_3:86852273-86852292 | None:intergenic | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | + | chr3_3:86852428-86852447 | None:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | - | chr3_3:86852428-86852447 | Msa0481100:CDS | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | + | chr3_3:86852578-86852597 | None:intergenic | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | + | chr3_3:86852628-86852647 | None:intergenic | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | - | chr3_3:86852628-86852647 | Msa0481100:CDS | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | - | chr3_3:86852751-86852770 | Msa0481100:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | - | chr3_3:86852796-86852815 | Msa0481100:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | - | chr3_3:86852797-86852816 | Msa0481100:intron | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | + | chr3_3:86852971-86852990 | None:intergenic | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | - | chr3_3:86853140-86853159 | Msa0481100:intron | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | - | chr3_3:86853152-86853171 | Msa0481100:intron | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | - | chr3_3:86853205-86853224 | Msa0481100:intron | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | + | chr3_3:86853292-86853311 | None:intergenic | 25.0% |
| ! | AAAACCATAAATAACCATAC+AGG | + | chr3_3:86853603-86853622 | None:intergenic | 25.0% |
| !!! | CACTTGTTGTAATTGTAATT+TGG | - | chr3_3:86854221-86854240 | Msa0481100:five_prime_UTR | 25.0% |
| ! | TGTTGTAATTGTAATTTGGA+TGG | - | chr3_3:86854225-86854244 | Msa0481100:five_prime_UTR | 25.0% |
| !! | TGTTGGTTCAAACTTGAAAT+GGG | + | chr3_3:86850252-86850271 | None:intergenic | 30.0% |
| ATGTTGTGAAGATGAAAACA+GGG | + | chr3_3:86850393-86850412 | None:intergenic | 30.0% | |
| AATGTTGTGAAGATGAAAAC+AGG | + | chr3_3:86850394-86850413 | None:intergenic | 30.0% | |
| AAATTTCATTCTGTCGGTAA+TGG | - | chr3_3:86851128-86851147 | Msa0481100:intron | 30.0% | |
| GGTATTATTCAGTAAGACAA+TGG | - | chr3_3:86851149-86851168 | Msa0481100:intron | 30.0% | |
| AATTAGTAGGGTACATACAT+TGG | - | chr3_3:86851191-86851210 | Msa0481100:intron | 30.0% | |
| TTTAAACATGTTTGAGGGAA+TGG | - | chr3_3:86851285-86851304 | Msa0481100:intron | 30.0% | |
| TTAAACATGTTTGAGGGAAT+GGG | - | chr3_3:86851286-86851305 | Msa0481100:intron | 30.0% | |
| ATCAGCAATACTACTTAAGA+GGG | - | chr3_3:86851474-86851493 | Msa0481100:CDS | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | + | chr3_3:86851583-86851602 | None:intergenic | 30.0% |
| CCTGAAAATGAGTTTATAAG+TGG | - | chr3_3:86851580-86851599 | Msa0481100:CDS | 30.0% | |
| CTAACTCAACATTACAAAAC+CGG | + | chr3_3:86851628-86851647 | None:intergenic | 30.0% | |
| AATAATTGTTGAGAAGGAGA+GGG | - | chr3_3:86851677-86851696 | Msa0481100:intron | 30.0% | |
| TCTTGGATCTCAAATATCTA+GGG | - | chr3_3:86851715-86851734 | Msa0481100:intron | 30.0% | |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | - | chr3_3:86851799-86851818 | Msa0481100:intron | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | - | chr3_3:86851803-86851822 | Msa0481100:intron | 30.0% |
| GCAGACTCATTAACAAATAT+CGG | + | chr3_3:86851920-86851939 | None:intergenic | 30.0% | |
| AAGAACCTAGATTCTGATAT+TGG | - | chr3_3:86851977-86851996 | Msa0481100:intron | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | - | chr3_3:86851983-86852002 | Msa0481100:intron | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | - | chr3_3:86851984-86852003 | Msa0481100:intron | 30.0% | |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | - | chr3_3:86852125-86852144 | Msa0481100:intron | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | + | chr3_3:86852271-86852290 | None:intergenic | 30.0% |
| AGTTAAAATCTTGTCATGGA+TGG | - | chr3_3:86852432-86852451 | Msa0481100:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | + | chr3_3:86852629-86852648 | None:intergenic | 30.0% | |
| ! | CTTTACTAAGTCTTATGAGA+AGG | - | chr3_3:86852627-86852646 | Msa0481100:CDS | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | - | chr3_3:86852629-86852648 | Msa0481100:CDS | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | - | chr3_3:86852798-86852817 | Msa0481100:intron | 30.0% |
| CGTCTACATAATGAAAATGT+GGG | + | chr3_3:86852869-86852888 | None:intergenic | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | + | chr3_3:86852870-86852889 | None:intergenic | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | + | chr3_3:86853121-86853140 | None:intergenic | 30.0% | |
| !! | GTTAATTTGCATACATGACA+AGG | + | chr3_3:86853270-86853289 | None:intergenic | 30.0% |
| CAATATAAATTTGACACGGT+AGG | - | chr3_3:86853432-86853451 | Msa0481100:CDS | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | - | chr3_3:86853713-86853732 | Msa0481100:CDS | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | + | chr3_3:86853981-86854000 | None:intergenic | 30.0% | |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | - | chr3_3:86854068-86854087 | Msa0481100:five_prime_UTR | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | - | chr3_3:86854078-86854097 | Msa0481100:five_prime_UTR | 30.0% |
| !! | TGTTGGTTCAAACTTGAAAT+GGG | + | chr3_3:86850252-86850271 | None:intergenic | 30.0% |
| ATGTTGTGAAGATGAAAACA+GGG | + | chr3_3:86850393-86850412 | None:intergenic | 30.0% | |
| AATGTTGTGAAGATGAAAAC+AGG | + | chr3_3:86850394-86850413 | None:intergenic | 30.0% | |
| AAATTTCATTCTGTCGGTAA+TGG | - | chr3_3:86851128-86851147 | Msa0481100:intron | 30.0% | |
| GGTATTATTCAGTAAGACAA+TGG | - | chr3_3:86851149-86851168 | Msa0481100:intron | 30.0% | |
| AATTAGTAGGGTACATACAT+TGG | - | chr3_3:86851191-86851210 | Msa0481100:intron | 30.0% | |
| TTTAAACATGTTTGAGGGAA+TGG | - | chr3_3:86851285-86851304 | Msa0481100:intron | 30.0% | |
| TTAAACATGTTTGAGGGAAT+GGG | - | chr3_3:86851286-86851305 | Msa0481100:intron | 30.0% | |
| ATCAGCAATACTACTTAAGA+GGG | - | chr3_3:86851474-86851493 | Msa0481100:CDS | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | + | chr3_3:86851583-86851602 | None:intergenic | 30.0% |
| CCTGAAAATGAGTTTATAAG+TGG | - | chr3_3:86851580-86851599 | Msa0481100:CDS | 30.0% | |
| CTAACTCAACATTACAAAAC+CGG | + | chr3_3:86851628-86851647 | None:intergenic | 30.0% | |
| AATAATTGTTGAGAAGGAGA+GGG | - | chr3_3:86851677-86851696 | Msa0481100:intron | 30.0% | |
| TCTTGGATCTCAAATATCTA+GGG | - | chr3_3:86851715-86851734 | Msa0481100:intron | 30.0% | |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | - | chr3_3:86851799-86851818 | Msa0481100:intron | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | - | chr3_3:86851803-86851822 | Msa0481100:intron | 30.0% |
| GCAGACTCATTAACAAATAT+CGG | + | chr3_3:86851920-86851939 | None:intergenic | 30.0% | |
| AAGAACCTAGATTCTGATAT+TGG | - | chr3_3:86851977-86851996 | Msa0481100:intron | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | - | chr3_3:86851983-86852002 | Msa0481100:intron | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | - | chr3_3:86851984-86852003 | Msa0481100:intron | 30.0% | |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | - | chr3_3:86852125-86852144 | Msa0481100:intron | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | + | chr3_3:86852271-86852290 | None:intergenic | 30.0% |
| AGTTAAAATCTTGTCATGGA+TGG | - | chr3_3:86852432-86852451 | Msa0481100:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | + | chr3_3:86852629-86852648 | None:intergenic | 30.0% | |
| ! | CTTTACTAAGTCTTATGAGA+AGG | - | chr3_3:86852627-86852646 | Msa0481100:CDS | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | - | chr3_3:86852629-86852648 | Msa0481100:CDS | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | - | chr3_3:86852798-86852817 | Msa0481100:intron | 30.0% |
| CGTCTACATAATGAAAATGT+GGG | + | chr3_3:86852869-86852888 | None:intergenic | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | + | chr3_3:86852870-86852889 | None:intergenic | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | + | chr3_3:86853121-86853140 | None:intergenic | 30.0% | |
| !! | GTTAATTTGCATACATGACA+AGG | + | chr3_3:86853270-86853289 | None:intergenic | 30.0% |
| CAATATAAATTTGACACGGT+AGG | - | chr3_3:86853432-86853451 | Msa0481100:CDS | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | - | chr3_3:86853713-86853732 | Msa0481100:CDS | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | + | chr3_3:86853981-86854000 | None:intergenic | 30.0% | |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | - | chr3_3:86854068-86854087 | Msa0481100:five_prime_UTR | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | - | chr3_3:86854078-86854097 | Msa0481100:five_prime_UTR | 30.0% |
| AAATGGGTCATCATGGAATT+GGG | + | chr3_3:86850236-86850255 | None:intergenic | 35.0% | |
| AAACTTGAAATGGGTCATCA+TGG | + | chr3_3:86850243-86850262 | None:intergenic | 35.0% | |
| !! | GTGTTGGTTCAAACTTGAAA+TGG | + | chr3_3:86850253-86850272 | None:intergenic | 35.0% |
| TGAAAAGAAGAAGAGACGTT+TGG | + | chr3_3:86850365-86850384 | None:intergenic | 35.0% | |
| TGTTGTGAAGATGAAAACAG+GGG | + | chr3_3:86850392-86850411 | None:intergenic | 35.0% | |
| ACGATCAAGGTAGACAAAAA+TGG | + | chr3_3:86850465-86850484 | None:intergenic | 35.0% | |
| CTTCTGATACTTTCTCTTCT+GGG | - | chr3_3:86850559-86850578 | Msa0481100:intron | 35.0% | |
| ! | TTTTTCTGCTCAACCTGTTT+TGG | - | chr3_3:86850774-86850793 | Msa0481100:CDS | 35.0% |
| CAGAATGTGAACTTCTCAAA+TGG | - | chr3_3:86850854-86850873 | Msa0481100:intron | 35.0% | |
| TCTCAAATGGTATGTTCAAG+AGG | - | chr3_3:86850867-86850886 | Msa0481100:intron | 35.0% | |
| GCCACAATGATGTGTTTATA+TGG | - | chr3_3:86851431-86851450 | Msa0481100:intron | 35.0% | |
| GCCATATAAACACATCATTG+TGG | + | chr3_3:86851435-86851454 | None:intergenic | 35.0% | |
| TTAAGTAGTATTGCTGATGG+CGG | + | chr3_3:86851472-86851491 | None:intergenic | 35.0% | |
| CTCTTAAGTAGTATTGCTGA+TGG | + | chr3_3:86851475-86851494 | None:intergenic | 35.0% | |
| CATCAGCAATACTACTTAAG+AGG | - | chr3_3:86851473-86851492 | Msa0481100:CDS | 35.0% | |
| !! | CTTAAGAGGGTTAGTTAGTT+AGG | - | chr3_3:86851487-86851506 | Msa0481100:CDS | 35.0% |
| !! | CGGTTTTGTAATGTTGAGTT+AGG | - | chr3_3:86851626-86851645 | Msa0481100:CDS | 35.0% |
| GAATAATTGTTGAGAAGGAG+AGG | - | chr3_3:86851676-86851695 | Msa0481100:intron | 35.0% | |
| ATAATTGTTGAGAAGGAGAG+GGG | - | chr3_3:86851678-86851697 | Msa0481100:intron | 35.0% | |
| GTCTTGGATCTCAAATATCT+AGG | - | chr3_3:86851714-86851733 | Msa0481100:intron | 35.0% | |
| CTTGGATCTCAAATATCTAG+GGG | - | chr3_3:86851716-86851735 | Msa0481100:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | + | chr3_3:86851908-86851927 | None:intergenic | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | + | chr3_3:86851985-86852004 | None:intergenic | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | - | chr3_3:86851982-86852001 | Msa0481100:intron | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | - | chr3_3:86852070-86852089 | Msa0481100:intron | 35.0% | |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | - | chr3_3:86852124-86852143 | Msa0481100:intron | 35.0% |
| TAAATATGATAGGCCTTCTG+AGG | - | chr3_3:86852234-86852253 | Msa0481100:CDS | 35.0% | |
| ! | TACATGAATTTGAAGCCACT+CGG | - | chr3_3:86852291-86852310 | Msa0481100:CDS | 35.0% |
| AGATAGGCCGAATATGATAA+GGG | + | chr3_3:86852412-86852431 | None:intergenic | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | + | chr3_3:86852413-86852432 | None:intergenic | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | - | chr3_3:86852435-86852454 | Msa0481100:CDS | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | + | chr3_3:86852616-86852635 | None:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | + | chr3_3:86852735-86852754 | None:intergenic | 35.0% | |
| ! | TTGATTTTACCATCGCTCTT+TGG | + | chr3_3:86852827-86852846 | None:intergenic | 35.0% |
| GATGGTAAAATCAATGTCTC+TGG | - | chr3_3:86852833-86852852 | Msa0481100:intron | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | - | chr3_3:86853044-86853063 | Msa0481100:intron | 35.0% |
| TGAAGTCATTCTCAAAGGTT+TGG | - | chr3_3:86853049-86853068 | Msa0481100:intron | 35.0% | |
| ! | GTTTGGTTCGTCTACATAAT+TGG | - | chr3_3:86853066-86853085 | Msa0481100:intron | 35.0% |
| AAATCATGGTGAGGTTAAAC+AGG | - | chr3_3:86853214-86853233 | Msa0481100:intron | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | - | chr3_3:86853447-86853466 | Msa0481100:CDS | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | - | chr3_3:86853462-86853481 | Msa0481100:CDS | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | - | chr3_3:86853533-86853552 | Msa0481100:intron | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | + | chr3_3:86853550-86853569 | None:intergenic | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | - | chr3_3:86853596-86853615 | Msa0481100:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | - | chr3_3:86853676-86853695 | Msa0481100:CDS | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | - | chr3_3:86853686-86853705 | Msa0481100:CDS | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | - | chr3_3:86853722-86853741 | Msa0481100:CDS | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | + | chr3_3:86853978-86853997 | None:intergenic | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | - | chr3_3:86853985-86854004 | Msa0481100:CDS | 35.0% | |
| AAATGGGTCATCATGGAATT+GGG | + | chr3_3:86850236-86850255 | None:intergenic | 35.0% | |
| AAACTTGAAATGGGTCATCA+TGG | + | chr3_3:86850243-86850262 | None:intergenic | 35.0% | |
| !! | GTGTTGGTTCAAACTTGAAA+TGG | + | chr3_3:86850253-86850272 | None:intergenic | 35.0% |
| TGAAAAGAAGAAGAGACGTT+TGG | + | chr3_3:86850365-86850384 | None:intergenic | 35.0% | |
| TGTTGTGAAGATGAAAACAG+GGG | + | chr3_3:86850392-86850411 | None:intergenic | 35.0% | |
| ACGATCAAGGTAGACAAAAA+TGG | + | chr3_3:86850465-86850484 | None:intergenic | 35.0% | |
| CTTCTGATACTTTCTCTTCT+GGG | - | chr3_3:86850559-86850578 | Msa0481100:intron | 35.0% | |
| ! | TTTTTCTGCTCAACCTGTTT+TGG | - | chr3_3:86850774-86850793 | Msa0481100:CDS | 35.0% |
| CAGAATGTGAACTTCTCAAA+TGG | - | chr3_3:86850854-86850873 | Msa0481100:intron | 35.0% | |
| TCTCAAATGGTATGTTCAAG+AGG | - | chr3_3:86850867-86850886 | Msa0481100:intron | 35.0% | |
| GCCACAATGATGTGTTTATA+TGG | - | chr3_3:86851431-86851450 | Msa0481100:intron | 35.0% | |
| GCCATATAAACACATCATTG+TGG | + | chr3_3:86851435-86851454 | None:intergenic | 35.0% | |
| TTAAGTAGTATTGCTGATGG+CGG | + | chr3_3:86851472-86851491 | None:intergenic | 35.0% | |
| CTCTTAAGTAGTATTGCTGA+TGG | + | chr3_3:86851475-86851494 | None:intergenic | 35.0% | |
| CATCAGCAATACTACTTAAG+AGG | - | chr3_3:86851473-86851492 | Msa0481100:CDS | 35.0% | |
| !! | CTTAAGAGGGTTAGTTAGTT+AGG | - | chr3_3:86851487-86851506 | Msa0481100:CDS | 35.0% |
| !! | CGGTTTTGTAATGTTGAGTT+AGG | - | chr3_3:86851626-86851645 | Msa0481100:CDS | 35.0% |
| GAATAATTGTTGAGAAGGAG+AGG | - | chr3_3:86851676-86851695 | Msa0481100:intron | 35.0% | |
| ATAATTGTTGAGAAGGAGAG+GGG | - | chr3_3:86851678-86851697 | Msa0481100:intron | 35.0% | |
| GTCTTGGATCTCAAATATCT+AGG | - | chr3_3:86851714-86851733 | Msa0481100:intron | 35.0% | |
| CTTGGATCTCAAATATCTAG+GGG | - | chr3_3:86851716-86851735 | Msa0481100:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | + | chr3_3:86851908-86851927 | None:intergenic | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | + | chr3_3:86851985-86852004 | None:intergenic | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | - | chr3_3:86851982-86852001 | Msa0481100:intron | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | - | chr3_3:86852070-86852089 | Msa0481100:intron | 35.0% | |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | - | chr3_3:86852124-86852143 | Msa0481100:intron | 35.0% |
| TAAATATGATAGGCCTTCTG+AGG | - | chr3_3:86852234-86852253 | Msa0481100:CDS | 35.0% | |
| ! | TACATGAATTTGAAGCCACT+CGG | - | chr3_3:86852291-86852310 | Msa0481100:CDS | 35.0% |
| AGATAGGCCGAATATGATAA+GGG | + | chr3_3:86852412-86852431 | None:intergenic | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | + | chr3_3:86852413-86852432 | None:intergenic | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | - | chr3_3:86852435-86852454 | Msa0481100:CDS | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | + | chr3_3:86852616-86852635 | None:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | + | chr3_3:86852735-86852754 | None:intergenic | 35.0% | |
| ! | TTGATTTTACCATCGCTCTT+TGG | + | chr3_3:86852827-86852846 | None:intergenic | 35.0% |
| GATGGTAAAATCAATGTCTC+TGG | - | chr3_3:86852833-86852852 | Msa0481100:intron | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | - | chr3_3:86853044-86853063 | Msa0481100:intron | 35.0% |
| TGAAGTCATTCTCAAAGGTT+TGG | - | chr3_3:86853049-86853068 | Msa0481100:intron | 35.0% | |
| ! | GTTTGGTTCGTCTACATAAT+TGG | - | chr3_3:86853066-86853085 | Msa0481100:intron | 35.0% |
| AAATCATGGTGAGGTTAAAC+AGG | - | chr3_3:86853214-86853233 | Msa0481100:intron | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | - | chr3_3:86853447-86853466 | Msa0481100:CDS | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | - | chr3_3:86853462-86853481 | Msa0481100:CDS | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | - | chr3_3:86853533-86853552 | Msa0481100:intron | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | + | chr3_3:86853550-86853569 | None:intergenic | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | - | chr3_3:86853596-86853615 | Msa0481100:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | - | chr3_3:86853676-86853695 | Msa0481100:CDS | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | - | chr3_3:86853686-86853705 | Msa0481100:CDS | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | - | chr3_3:86853722-86853741 | Msa0481100:CDS | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | + | chr3_3:86853978-86853997 | None:intergenic | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | - | chr3_3:86853985-86854004 | Msa0481100:CDS | 35.0% | |
| GGAATTGGGATGGATAGATA+AGG | + | chr3_3:86850222-86850241 | None:intergenic | 40.0% | |
| GAAATGGGTCATCATGGAAT+TGG | + | chr3_3:86850237-86850256 | None:intergenic | 40.0% | |
| GACTGGTAATAATGTCGTGT+TGG | + | chr3_3:86850269-86850288 | None:intergenic | 40.0% | |
| ! | CAGAGAAGAGCTTTGATCTA+CGG | - | chr3_3:86850513-86850532 | Msa0481100:intron | 40.0% |
| AAGTATCAGAAGCAGAGAGA+CGG | + | chr3_3:86850551-86850570 | None:intergenic | 40.0% | |
| GCTTCTGATACTTTCTCTTC+TGG | - | chr3_3:86850558-86850577 | Msa0481100:intron | 40.0% | |
| TGAAACAGAGGAATGGTAAG+AGG | + | chr3_3:86850592-86850611 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGAAACAGAGGAA+TGG | + | chr3_3:86850599-86850618 | None:intergenic | 40.0% |
| ! | CAGAAAAGAGTGTGAAACAG+AGG | + | chr3_3:86850604-86850623 | None:intergenic | 40.0% |
| TCTATGCGAGAATTGGGTTT+AGG | + | chr3_3:86850630-86850649 | None:intergenic | 40.0% | |
| CTCACATCTATGCGAGAATT+GGG | + | chr3_3:86850636-86850655 | None:intergenic | 40.0% | |
| ACTCACATCTATGCGAGAAT+TGG | + | chr3_3:86850637-86850656 | None:intergenic | 40.0% | |
| ! | GAACATAGTTGATGTCCCTT+TGG | - | chr3_3:86850810-86850829 | Msa0481100:CDS | 40.0% |
| TCACTTTGAACTTCACAGAG+TGG | + | chr3_3:86851019-86851038 | None:intergenic | 40.0% | |
| GAAATTACGAGTCGCTACAA+AGG | - | chr3_3:86851052-86851071 | Msa0481100:intron | 40.0% | |
| TCTAATATTCTGCATGGTCC+TGG | - | chr3_3:86851082-86851101 | Msa0481100:intron | 40.0% | |
| GTACATACATTGGTGTGAGA+GGG | - | chr3_3:86851201-86851220 | Msa0481100:intron | 40.0% | |
| TACATACATTGGTGTGAGAG+GGG | - | chr3_3:86851202-86851221 | Msa0481100:intron | 40.0% | |
| ! | GTGTTGTTAAATGGCCACAA+TGG | - | chr3_3:86851321-86851340 | Msa0481100:intron | 40.0% |
| CACCATAGGCAATTTGTGAA+GGG | - | chr3_3:86851384-86851403 | Msa0481100:intron | 40.0% | |
| ATCCCTTCACAAATTGCCTA+TGG | + | chr3_3:86851389-86851408 | None:intergenic | 40.0% | |
| AAACACATCATTGTGGCCTA+TGG | + | chr3_3:86851428-86851447 | None:intergenic | 40.0% | |
| ! | AGGTCTTATCTCAGCAAATG+TGG | + | chr3_3:86851563-86851582 | None:intergenic | 40.0% |
| GCATTCTTCACTCTACAAAC+CGG | - | chr3_3:86851606-86851625 | Msa0481100:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | - | chr3_3:86852020-86852039 | Msa0481100:intron | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | - | chr3_3:86852084-86852103 | Msa0481100:intron | 40.0% | |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | - | chr3_3:86852166-86852185 | Msa0481100:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | - | chr3_3:86852180-86852199 | Msa0481100:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | - | chr3_3:86852181-86852200 | Msa0481100:intron | 40.0% |
| TCCTGTCCCCTTATCATATT+CGG | - | chr3_3:86852402-86852421 | Msa0481100:CDS | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | + | chr3_3:86852411-86852430 | None:intergenic | 40.0% | |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | - | chr3_3:86852460-86852479 | Msa0481100:CDS | 40.0% |
| GGTTTAAAAATCAGCAGGAC+AGG | - | chr3_3:86852465-86852484 | Msa0481100:CDS | 40.0% | |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | - | chr3_3:86852633-86852652 | Msa0481100:CDS | 40.0% |
| TAAAGACCTTGGTCATGAGA+AGG | - | chr3_3:86852762-86852781 | Msa0481100:intron | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | + | chr3_3:86852771-86852790 | None:intergenic | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | + | chr3_3:86852945-86852964 | None:intergenic | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | + | chr3_3:86853017-86853036 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAACTGTTCACAG+AGG | + | chr3_3:86853018-86853037 | None:intergenic | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | - | chr3_3:86853243-86853262 | Msa0481100:intron | 40.0% |
| ACACAACATTGGAATTGCGA+TGG | - | chr3_3:86853473-86853492 | Msa0481100:CDS | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | - | chr3_3:86853536-86853555 | Msa0481100:intron | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | - | chr3_3:86853586-86853605 | Msa0481100:intron | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | - | chr3_3:86853636-86853655 | Msa0481100:CDS | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | - | chr3_3:86853725-86853744 | Msa0481100:CDS | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | + | chr3_3:86853779-86853798 | None:intergenic | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | + | chr3_3:86853780-86853799 | None:intergenic | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | - | chr3_3:86853779-86853798 | Msa0481100:intron | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | + | chr3_3:86853798-86853817 | None:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | + | chr3_3:86853821-86853840 | None:intergenic | 40.0% | |
| ! | TTGCAAGATTTTGCAACGAG+TGG | - | chr3_3:86854133-86854152 | Msa0481100:five_prime_UTR | 40.0% |
| AAATGCAACACGAGTAACTC+TGG | + | chr3_3:86854177-86854196 | None:intergenic | 40.0% | |
| GGAATTGGGATGGATAGATA+AGG | + | chr3_3:86850222-86850241 | None:intergenic | 40.0% | |
| GAAATGGGTCATCATGGAAT+TGG | + | chr3_3:86850237-86850256 | None:intergenic | 40.0% | |
| GACTGGTAATAATGTCGTGT+TGG | + | chr3_3:86850269-86850288 | None:intergenic | 40.0% | |
| ! | CAGAGAAGAGCTTTGATCTA+CGG | - | chr3_3:86850513-86850532 | Msa0481100:intron | 40.0% |
| AAGTATCAGAAGCAGAGAGA+CGG | + | chr3_3:86850551-86850570 | None:intergenic | 40.0% | |
| GCTTCTGATACTTTCTCTTC+TGG | - | chr3_3:86850558-86850577 | Msa0481100:intron | 40.0% | |
| TGAAACAGAGGAATGGTAAG+AGG | + | chr3_3:86850592-86850611 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGAAACAGAGGAA+TGG | + | chr3_3:86850599-86850618 | None:intergenic | 40.0% |
| ! | CAGAAAAGAGTGTGAAACAG+AGG | + | chr3_3:86850604-86850623 | None:intergenic | 40.0% |
| TCTATGCGAGAATTGGGTTT+AGG | + | chr3_3:86850630-86850649 | None:intergenic | 40.0% | |
| CTCACATCTATGCGAGAATT+GGG | + | chr3_3:86850636-86850655 | None:intergenic | 40.0% | |
| ACTCACATCTATGCGAGAAT+TGG | + | chr3_3:86850637-86850656 | None:intergenic | 40.0% | |
| ! | GAACATAGTTGATGTCCCTT+TGG | - | chr3_3:86850810-86850829 | Msa0481100:CDS | 40.0% |
| TCACTTTGAACTTCACAGAG+TGG | + | chr3_3:86851019-86851038 | None:intergenic | 40.0% | |
| GAAATTACGAGTCGCTACAA+AGG | - | chr3_3:86851052-86851071 | Msa0481100:intron | 40.0% | |
| TCTAATATTCTGCATGGTCC+TGG | - | chr3_3:86851082-86851101 | Msa0481100:intron | 40.0% | |
| GTACATACATTGGTGTGAGA+GGG | - | chr3_3:86851201-86851220 | Msa0481100:intron | 40.0% | |
| TACATACATTGGTGTGAGAG+GGG | - | chr3_3:86851202-86851221 | Msa0481100:intron | 40.0% | |
| ! | GTGTTGTTAAATGGCCACAA+TGG | - | chr3_3:86851321-86851340 | Msa0481100:intron | 40.0% |
| CACCATAGGCAATTTGTGAA+GGG | - | chr3_3:86851384-86851403 | Msa0481100:intron | 40.0% | |
| ATCCCTTCACAAATTGCCTA+TGG | + | chr3_3:86851389-86851408 | None:intergenic | 40.0% | |
| AAACACATCATTGTGGCCTA+TGG | + | chr3_3:86851428-86851447 | None:intergenic | 40.0% | |
| ! | AGGTCTTATCTCAGCAAATG+TGG | + | chr3_3:86851563-86851582 | None:intergenic | 40.0% |
| GCATTCTTCACTCTACAAAC+CGG | - | chr3_3:86851606-86851625 | Msa0481100:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | - | chr3_3:86852020-86852039 | Msa0481100:intron | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | - | chr3_3:86852084-86852103 | Msa0481100:intron | 40.0% | |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | - | chr3_3:86852166-86852185 | Msa0481100:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | - | chr3_3:86852180-86852199 | Msa0481100:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | - | chr3_3:86852181-86852200 | Msa0481100:intron | 40.0% |
| TCCTGTCCCCTTATCATATT+CGG | - | chr3_3:86852402-86852421 | Msa0481100:CDS | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | + | chr3_3:86852411-86852430 | None:intergenic | 40.0% | |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | - | chr3_3:86852460-86852479 | Msa0481100:CDS | 40.0% |
| GGTTTAAAAATCAGCAGGAC+AGG | - | chr3_3:86852465-86852484 | Msa0481100:CDS | 40.0% | |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | - | chr3_3:86852633-86852652 | Msa0481100:CDS | 40.0% |
| TAAAGACCTTGGTCATGAGA+AGG | - | chr3_3:86852762-86852781 | Msa0481100:intron | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | + | chr3_3:86852771-86852790 | None:intergenic | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | + | chr3_3:86852945-86852964 | None:intergenic | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | + | chr3_3:86853017-86853036 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAACTGTTCACAG+AGG | + | chr3_3:86853018-86853037 | None:intergenic | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | - | chr3_3:86853243-86853262 | Msa0481100:intron | 40.0% |
| ACACAACATTGGAATTGCGA+TGG | - | chr3_3:86853473-86853492 | Msa0481100:CDS | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | - | chr3_3:86853536-86853555 | Msa0481100:intron | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | - | chr3_3:86853586-86853605 | Msa0481100:intron | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | - | chr3_3:86853636-86853655 | Msa0481100:CDS | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | - | chr3_3:86853725-86853744 | Msa0481100:CDS | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | + | chr3_3:86853779-86853798 | None:intergenic | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | + | chr3_3:86853780-86853799 | None:intergenic | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | - | chr3_3:86853779-86853798 | Msa0481100:intron | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | + | chr3_3:86853798-86853817 | None:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | + | chr3_3:86853821-86853840 | None:intergenic | 40.0% | |
| ! | TTGCAAGATTTTGCAACGAG+TGG | - | chr3_3:86854133-86854152 | Msa0481100:five_prime_UTR | 40.0% |
| AAATGCAACACGAGTAACTC+TGG | + | chr3_3:86854177-86854196 | None:intergenic | 40.0% | |
| CAGCATCTTTGCAACGATCA+AGG | + | chr3_3:86850478-86850497 | None:intergenic | 45.0% | |
| CGTAGATCAAAGCTCTTCTC+TGG | + | chr3_3:86850515-86850534 | None:intergenic | 45.0% | |
| AACAGAGGAATGGTAAGAGG+AGG | + | chr3_3:86850589-86850608 | None:intergenic | 45.0% | |
| !! | ACCTGTTTTGGACATTCCTG+CGG | - | chr3_3:86850786-86850805 | Msa0481100:CDS | 45.0% |
| GGTACATACATTGGTGTGAG+AGG | - | chr3_3:86851200-86851219 | Msa0481100:intron | 45.0% | |
| ! | GCTTTTCTGTCAACCACCAT+AGG | - | chr3_3:86851370-86851389 | Msa0481100:intron | 45.0% |
| CCTTCACAAATTGCCTATGG+TGG | + | chr3_3:86851386-86851405 | None:intergenic | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | - | chr3_3:86851383-86851402 | Msa0481100:intron | 45.0% | |
| GGGTTCATTTGGTAGAGTCT+TGG | - | chr3_3:86851698-86851717 | Msa0481100:intron | 45.0% | |
| AAAGTCGTTGAAGGACATGC+AGG | + | chr3_3:86851860-86851879 | None:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | - | chr3_3:86851860-86851879 | Msa0481100:intron | 45.0% |
| GAGTCACCAAAAGTCGTTGA+AGG | + | chr3_3:86851869-86851888 | None:intergenic | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | - | chr3_3:86851995-86852014 | Msa0481100:intron | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | + | chr3_3:86852034-86852053 | None:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | - | chr3_3:86852033-86852052 | Msa0481100:intron | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | - | chr3_3:86852079-86852098 | Msa0481100:intron | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | - | chr3_3:86852083-86852102 | Msa0481100:intron | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | + | chr3_3:86852163-86852182 | None:intergenic | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | - | chr3_3:86852887-86852906 | Msa0481100:intron | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | - | chr3_3:86852890-86852909 | Msa0481100:intron | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | + | chr3_3:86853016-86853035 | None:intergenic | 45.0% | |
| ! | GGTTGCACTCATTAGCCTAT+TGG | - | chr3_3:86853235-86853254 | Msa0481100:intron | 45.0% |
| ACAAGGACCAAAGAGCCAAT+AGG | + | chr3_3:86853253-86853272 | None:intergenic | 45.0% | |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | + | chr3_3:86853645-86853664 | None:intergenic | 45.0% |
| GCTAGCAAGGTTGCAACAAT+TGG | - | chr3_3:86853649-86853668 | Msa0481100:CDS | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | - | chr3_3:86853689-86853708 | Msa0481100:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | - | chr3_3:86853690-86853709 | Msa0481100:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | + | chr3_3:86853696-86853715 | None:intergenic | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | - | chr3_3:86853734-86853753 | Msa0481100:CDS | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | + | chr3_3:86853762-86853781 | None:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | + | chr3_3:86853763-86853782 | None:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | + | chr3_3:86853764-86853783 | None:intergenic | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | - | chr3_3:86853778-86853797 | Msa0481100:intron | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | - | chr3_3:86853801-86853820 | Msa0481100:intron | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | + | chr3_3:86853851-86853870 | None:intergenic | 45.0% | |
| CAGCATCTTTGCAACGATCA+AGG | + | chr3_3:86850478-86850497 | None:intergenic | 45.0% | |
| CGTAGATCAAAGCTCTTCTC+TGG | + | chr3_3:86850515-86850534 | None:intergenic | 45.0% | |
| AACAGAGGAATGGTAAGAGG+AGG | + | chr3_3:86850589-86850608 | None:intergenic | 45.0% | |
| !! | ACCTGTTTTGGACATTCCTG+CGG | - | chr3_3:86850786-86850805 | Msa0481100:CDS | 45.0% |
| GGTACATACATTGGTGTGAG+AGG | - | chr3_3:86851200-86851219 | Msa0481100:intron | 45.0% | |
| ! | GCTTTTCTGTCAACCACCAT+AGG | - | chr3_3:86851370-86851389 | Msa0481100:intron | 45.0% |
| CCTTCACAAATTGCCTATGG+TGG | + | chr3_3:86851386-86851405 | None:intergenic | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | - | chr3_3:86851383-86851402 | Msa0481100:intron | 45.0% | |
| GGGTTCATTTGGTAGAGTCT+TGG | - | chr3_3:86851698-86851717 | Msa0481100:intron | 45.0% | |
| AAAGTCGTTGAAGGACATGC+AGG | + | chr3_3:86851860-86851879 | None:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | - | chr3_3:86851860-86851879 | Msa0481100:intron | 45.0% |
| GAGTCACCAAAAGTCGTTGA+AGG | + | chr3_3:86851869-86851888 | None:intergenic | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | - | chr3_3:86851995-86852014 | Msa0481100:intron | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | + | chr3_3:86852034-86852053 | None:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | - | chr3_3:86852033-86852052 | Msa0481100:intron | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | - | chr3_3:86852079-86852098 | Msa0481100:intron | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | - | chr3_3:86852083-86852102 | Msa0481100:intron | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | + | chr3_3:86852163-86852182 | None:intergenic | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | - | chr3_3:86852887-86852906 | Msa0481100:intron | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | - | chr3_3:86852890-86852909 | Msa0481100:intron | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | + | chr3_3:86853016-86853035 | None:intergenic | 45.0% | |
| ! | GGTTGCACTCATTAGCCTAT+TGG | - | chr3_3:86853235-86853254 | Msa0481100:intron | 45.0% |
| ACAAGGACCAAAGAGCCAAT+AGG | + | chr3_3:86853253-86853272 | None:intergenic | 45.0% | |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | + | chr3_3:86853645-86853664 | None:intergenic | 45.0% |
| GCTAGCAAGGTTGCAACAAT+TGG | - | chr3_3:86853649-86853668 | Msa0481100:CDS | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | - | chr3_3:86853689-86853708 | Msa0481100:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | - | chr3_3:86853690-86853709 | Msa0481100:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | + | chr3_3:86853696-86853715 | None:intergenic | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | - | chr3_3:86853734-86853753 | Msa0481100:CDS | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | + | chr3_3:86853762-86853781 | None:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | + | chr3_3:86853763-86853782 | None:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | + | chr3_3:86853764-86853783 | None:intergenic | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | - | chr3_3:86853778-86853797 | Msa0481100:intron | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | - | chr3_3:86853801-86853820 | Msa0481100:intron | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | + | chr3_3:86853851-86853870 | None:intergenic | 45.0% | |
| GGGTCATCATGGAATTGGGA+TGG | + | chr3_3:86850232-86850251 | None:intergenic | 50.0% | |
| CATGCTGACAAGATGCTGAC+TGG | + | chr3_3:86850286-86850305 | None:intergenic | 50.0% | |
| TTGCAAAGATGCTGAGCCGT+CGG | - | chr3_3:86850484-86850503 | Msa0481100:intron | 50.0% | |
| CTCTTCTCTGGCAAATCCGA+CGG | + | chr3_3:86850503-86850522 | None:intergenic | 50.0% | |
| CAGAGAGACGGAACAATCTC+TGG | + | chr3_3:86850539-86850558 | None:intergenic | 50.0% | |
| !! | CCTGTTTTGGACATTCCTGC+GGG | - | chr3_3:86850787-86850806 | Msa0481100:CDS | 50.0% |
| !! | CTGTTTTGGACATTCCTGCG+GGG | - | chr3_3:86850788-86850807 | Msa0481100:CDS | 50.0% |
| ACATCAACTATGTTCCCCGC+AGG | + | chr3_3:86850805-86850824 | None:intergenic | 50.0% | |
| CTTCACCAGTCTGTGCCAAA+GGG | + | chr3_3:86850828-86850847 | None:intergenic | 50.0% | |
| TGGTCCTGGCGACATTGTAA+AGG | - | chr3_3:86851096-86851115 | Msa0481100:intron | 50.0% | |
| CTGACCTTTACAATGTCGCC+AGG | + | chr3_3:86851103-86851122 | None:intergenic | 50.0% | |
| TACATTGGTGTGAGAGGGGT+TGG | - | chr3_3:86851206-86851225 | Msa0481100:intron | 50.0% | |
| ACATTGGTGTGAGAGGGGTT+GGG | - | chr3_3:86851207-86851226 | Msa0481100:intron | 50.0% | |
| GGCAATTTGTGAAGGGATGC+TGG | - | chr3_3:86851391-86851410 | Msa0481100:intron | 50.0% | |
| !! | AGTAGTATTGCTGATGGCGG+AGG | + | chr3_3:86851469-86851488 | None:intergenic | 50.0% |
| GAGAAGGAGAGGGGTTCATT+TGG | - | chr3_3:86851687-86851706 | Msa0481100:intron | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | - | chr3_3:86852040-86852059 | Msa0481100:intron | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | - | chr3_3:86852190-86852209 | Msa0481100:intron | 50.0% | |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | + | chr3_3:86852250-86852269 | None:intergenic | 50.0% |
| AGGACACGATACTTCCCCTT+AGG | - | chr3_3:86852254-86852273 | Msa0481100:CDS | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | - | chr3_3:86852298-86852317 | Msa0481100:CDS | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | - | chr3_3:86852299-86852318 | Msa0481100:CDS | 50.0% |
| GCCGAATATGATAAGGGGAC+AGG | + | chr3_3:86852406-86852425 | None:intergenic | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | - | chr3_3:86852440-86852459 | Msa0481100:CDS | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | - | chr3_3:86852815-86852834 | Msa0481100:intron | 50.0% | |
| !! | CGACGTTTTAAGCTCCACCA+GGG | + | chr3_3:86852907-86852926 | None:intergenic | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | + | chr3_3:86852908-86852927 | None:intergenic | 50.0% |
| ATTGCGATGGCAACACCACA+TGG | - | chr3_3:86853486-86853505 | Msa0481100:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | + | chr3_3:86853504-86853523 | None:intergenic | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | - | chr3_3:86853815-86853834 | Msa0481100:intron | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | - | chr3_3:86854098-86854117 | Msa0481100:five_prime_UTR | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | - | chr3_3:86854102-86854121 | Msa0481100:five_prime_UTR | 50.0% | |
| GGGTCATCATGGAATTGGGA+TGG | + | chr3_3:86850232-86850251 | None:intergenic | 50.0% | |
| CATGCTGACAAGATGCTGAC+TGG | + | chr3_3:86850286-86850305 | None:intergenic | 50.0% | |
| TTGCAAAGATGCTGAGCCGT+CGG | - | chr3_3:86850484-86850503 | Msa0481100:intron | 50.0% | |
| CTCTTCTCTGGCAAATCCGA+CGG | + | chr3_3:86850503-86850522 | None:intergenic | 50.0% | |
| CAGAGAGACGGAACAATCTC+TGG | + | chr3_3:86850539-86850558 | None:intergenic | 50.0% | |
| !! | CCTGTTTTGGACATTCCTGC+GGG | - | chr3_3:86850787-86850806 | Msa0481100:CDS | 50.0% |
| !! | CTGTTTTGGACATTCCTGCG+GGG | - | chr3_3:86850788-86850807 | Msa0481100:CDS | 50.0% |
| ACATCAACTATGTTCCCCGC+AGG | + | chr3_3:86850805-86850824 | None:intergenic | 50.0% | |
| CTTCACCAGTCTGTGCCAAA+GGG | + | chr3_3:86850828-86850847 | None:intergenic | 50.0% | |
| TGGTCCTGGCGACATTGTAA+AGG | - | chr3_3:86851096-86851115 | Msa0481100:intron | 50.0% | |
| CTGACCTTTACAATGTCGCC+AGG | + | chr3_3:86851103-86851122 | None:intergenic | 50.0% | |
| TACATTGGTGTGAGAGGGGT+TGG | - | chr3_3:86851206-86851225 | Msa0481100:intron | 50.0% | |
| ACATTGGTGTGAGAGGGGTT+GGG | - | chr3_3:86851207-86851226 | Msa0481100:intron | 50.0% | |
| GGCAATTTGTGAAGGGATGC+TGG | - | chr3_3:86851391-86851410 | Msa0481100:intron | 50.0% | |
| !! | AGTAGTATTGCTGATGGCGG+AGG | + | chr3_3:86851469-86851488 | None:intergenic | 50.0% |
| GAGAAGGAGAGGGGTTCATT+TGG | - | chr3_3:86851687-86851706 | Msa0481100:intron | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | - | chr3_3:86852040-86852059 | Msa0481100:intron | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | - | chr3_3:86852190-86852209 | Msa0481100:intron | 50.0% | |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | + | chr3_3:86852250-86852269 | None:intergenic | 50.0% |
| AGGACACGATACTTCCCCTT+AGG | - | chr3_3:86852254-86852273 | Msa0481100:CDS | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | - | chr3_3:86852298-86852317 | Msa0481100:CDS | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | - | chr3_3:86852299-86852318 | Msa0481100:CDS | 50.0% |
| GCCGAATATGATAAGGGGAC+AGG | + | chr3_3:86852406-86852425 | None:intergenic | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | - | chr3_3:86852440-86852459 | Msa0481100:CDS | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | - | chr3_3:86852815-86852834 | Msa0481100:intron | 50.0% | |
| !! | CGACGTTTTAAGCTCCACCA+GGG | + | chr3_3:86852907-86852926 | None:intergenic | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | + | chr3_3:86852908-86852927 | None:intergenic | 50.0% |
| ATTGCGATGGCAACACCACA+TGG | - | chr3_3:86853486-86853505 | Msa0481100:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | + | chr3_3:86853504-86853523 | None:intergenic | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | - | chr3_3:86853815-86853834 | Msa0481100:intron | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | - | chr3_3:86854098-86854117 | Msa0481100:five_prime_UTR | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | - | chr3_3:86854102-86854121 | Msa0481100:five_prime_UTR | 50.0% | |
| CCCGCAGGAATGTCCAAAAC+AGG | + | chr3_3:86850790-86850809 | None:intergenic | 55.0% | |
| GATGTCCCTTTGGCACAGAC+TGG | - | chr3_3:86850820-86850839 | Msa0481100:CDS | 55.0% | |
| CCTTCACCAGTCTGTGCCAA+AGG | + | chr3_3:86850829-86850848 | None:intergenic | 55.0% | |
| CCTTTGGCACAGACTGGTGA+AGG | - | chr3_3:86850826-86850845 | Msa0481100:CDS | 55.0% | |
| !! | ATGGTGCCGCTATGGAGGAA+TGG | - | chr3_3:86851340-86851359 | Msa0481100:intron | 55.0% |
| GTCACGCCATTCCTCCATAG+CGG | + | chr3_3:86851349-86851368 | None:intergenic | 55.0% | |
| TTGTGAAGGGATGCTGGCCA+TGG | - | chr3_3:86851397-86851416 | Msa0481100:intron | 55.0% | |
| CTCTTATCCCTGCTACCGAG+TGG | + | chr3_3:86852309-86852328 | None:intergenic | 55.0% | |
| CCCGCAGGAATGTCCAAAAC+AGG | + | chr3_3:86850790-86850809 | None:intergenic | 55.0% | |
| GATGTCCCTTTGGCACAGAC+TGG | - | chr3_3:86850820-86850839 | Msa0481100:CDS | 55.0% | |
| CCTTCACCAGTCTGTGCCAA+AGG | + | chr3_3:86850829-86850848 | None:intergenic | 55.0% | |
| CCTTTGGCACAGACTGGTGA+AGG | - | chr3_3:86850826-86850845 | Msa0481100:CDS | 55.0% | |
| !! | ATGGTGCCGCTATGGAGGAA+TGG | - | chr3_3:86851340-86851359 | Msa0481100:intron | 55.0% |
| GTCACGCCATTCCTCCATAG+CGG | + | chr3_3:86851349-86851368 | None:intergenic | 55.0% | |
| TTGTGAAGGGATGCTGGCCA+TGG | - | chr3_3:86851397-86851416 | Msa0481100:intron | 55.0% | |
| CTCTTATCCCTGCTACCGAG+TGG | + | chr3_3:86852309-86852328 | None:intergenic | 55.0% | |
| TTGGTGTGAGAGGGGTTGGG+AGG | - | chr3_3:86851210-86851229 | Msa0481100:intron | 60.0% | |
| !! | TGGCCACAATGGTGCCGCTA+TGG | - | chr3_3:86851332-86851351 | Msa0481100:intron | 60.0% |
| CCTCCATAGCGGCACCATTG+TGG | + | chr3_3:86851338-86851357 | None:intergenic | 60.0% | |
| !! | CCACAATGGTGCCGCTATGG+AGG | - | chr3_3:86851335-86851354 | Msa0481100:intron | 60.0% |
| TGAAGGGATGCTGGCCATGG+TGG | - | chr3_3:86851400-86851419 | Msa0481100:intron | 60.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | - | chr3_3:86852444-86852463 | Msa0481100:CDS | 60.0% | |
| TTGGTGTGAGAGGGGTTGGG+AGG | - | chr3_3:86851210-86851229 | Msa0481100:intron | 60.0% | |
| !! | TGGCCACAATGGTGCCGCTA+TGG | - | chr3_3:86851332-86851351 | Msa0481100:intron | 60.0% |
| CCTCCATAGCGGCACCATTG+TGG | + | chr3_3:86851338-86851357 | None:intergenic | 60.0% | |
| !! | CCACAATGGTGCCGCTATGG+AGG | - | chr3_3:86851335-86851354 | Msa0481100:intron | 60.0% |
| TGAAGGGATGCTGGCCATGG+TGG | - | chr3_3:86851400-86851419 | Msa0481100:intron | 60.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | - | chr3_3:86852444-86852463 | Msa0481100:CDS | 60.0% | |
| TGTGGCCTATGGCGCCACCA+TGG | + | chr3_3:86851417-86851436 | None:intergenic | 65.0% | |
| TGTGGCCTATGGCGCCACCA+TGG | + | chr3_3:86851417-86851436 | None:intergenic | 65.0% | |
| ! | GCTGGCCATGGTGGCGCCAT+AGG | - | chr3_3:86851409-86851428 | Msa0481100:intron | 70.0% |
| ! | GCTGGCCATGGTGGCGCCAT+AGG | - | chr3_3:86851409-86851428 | Msa0481100:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 86850209 | 86854292 | 86850209 | ID=Msa0481100;Name=Msa0481100 |
| chr3_3 | mRNA | 86850209 | 86854292 | 86850209 | ID=Msa0481100-mRNA-1;Parent=Msa0481100;Name=Msa0481100-mRNA-1;_AED=0.03;_eAED=0.03;_QI=283|1|1|1|1|0.87|8|89|520 |
| chr3_3 | exon | 86850209 | 86850411 | 86850209 | ID=Msa0481100-mRNA-1:exon:25113;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86850636 | 86850863 | 86850636 | ID=Msa0481100-mRNA-1:exon:25112;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86850944 | 86851032 | 86850944 | ID=Msa0481100-mRNA-1:exon:25111;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86851436 | 86851683 | 86851436 | ID=Msa0481100-mRNA-1:exon:25110;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86852226 | 86852680 | 86852226 | ID=Msa0481100-mRNA-1:exon:25109;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86853384 | 86853509 | 86853384 | ID=Msa0481100-mRNA-1:exon:25108;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86853613 | 86853756 | 86853613 | ID=Msa0481100-mRNA-1:exon:25107;Parent=Msa0481100-mRNA-1 |
| chr3_3 | exon | 86853851 | 86854292 | 86853851 | ID=Msa0481100-mRNA-1:exon:25106;Parent=Msa0481100-mRNA-1 |
| chr3_3 | five_prime_UTR | 86854010 | 86854292 | 86854010 | ID=Msa0481100-mRNA-1:five_prime_utr;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86853851 | 86854009 | 86853851 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86853613 | 86853756 | 86853613 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86853384 | 86853509 | 86853384 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86852226 | 86852680 | 86852226 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86851436 | 86851683 | 86851436 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86850944 | 86851032 | 86850944 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86850636 | 86850863 | 86850636 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | CDS | 86850298 | 86850411 | 86850298 | ID=Msa0481100-mRNA-1:cds;Parent=Msa0481100-mRNA-1 |
| chr3_3 | three_prime_UTR | 86850209 | 86850297 | 86850209 | ID=Msa0481100-mRNA-1:three_prime_utr;Parent=Msa0481100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
