Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211600 | XP_003609016.1 | 98.195 | 554 | 9 | 1 | 1 | 554 | 1 | 553 | 0.0 | 1126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211600 | sp|Q8VZC3|AL121_ARATH | 80.036 | 556 | 109 | 2 | 1 | 554 | 1 | 556 | 0.0 | 950 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616680 | Msa1211600 | 0.834614 | 2.706441e-56 | -8.615850e-47 |
| Msa0616770 | Msa1211600 | 0.803652 | 3.147492e-49 | -8.615850e-47 |
| Msa0627770 | Msa1211600 | 0.824617 | 7.327135e-54 | -8.615850e-47 |
| Msa0628880 | Msa1211600 | 0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0699890 | Msa1211600 | 0.804668 | 1.934676e-49 | -8.615850e-47 |
| Msa0143630 | Msa1211600 | 0.969527 | 2.965353e-130 | -8.615850e-47 |
| Msa0374790 | Msa1211600 | 0.874448 | 6.701759e-68 | -8.615850e-47 |
| Msa0424000 | Msa1211600 | 0.867342 | 1.468872e-65 | -8.615850e-47 |
| Msa0458220 | Msa1211600 | 0.804323 | 2.282326e-49 | -8.615850e-47 |
| Msa0470920 | Msa1211600 | 0.879456 | 1.227542e-69 | -8.615850e-47 |
| Msa0481100 | Msa1211600 | 0.862464 | 4.976976e-64 | -8.615850e-47 |
| Msa0982380 | Msa1211600 | 0.878183 | 3.451791e-69 | -8.615850e-47 |
| Msa1211600 | Msa1217950 | 0.861542 | 9.538811e-64 | -8.615850e-47 |
| Msa1211600 | Msa1339870 | 0.981931 | 8.348472e-154 | -8.615850e-47 |
| Msa1211600 | Msa1462640 | 0.809245 | 2.081576e-50 | -8.615850e-47 |
| Msa0504700 | Msa1211600 | 0.800221 | 1.595574e-48 | -8.615850e-47 |
| Msa0580850 | Msa1211600 | 0.974475 | 3.206197e-138 | -8.615850e-47 |
| Msa0587530 | Msa1211600 | 0.823696 | 1.205142e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211600 | MtrunA17_Chr4g0060261 | 98.195 | 554 | 9 | 1 | 1 | 554 | 1 | 553 | 0.0 | 1126 |
| Msa1211600 | MtrunA17_Chr3g0118121 | 26.885 | 305 | 189 | 12 | 188 | 477 | 144 | 429 | 1.44e-12 | 70.1 |
| Msa1211600 | MtrunA17_Chr4g0059221 | 24.775 | 444 | 283 | 17 | 54 | 477 | 66 | 478 | 2.54e-12 | 69.3 |
| Msa1211600 | MtrunA17_Chr4g0074171 | 25.143 | 350 | 224 | 14 | 58 | 387 | 22 | 353 | 3.73e-12 | 68.9 |
| Msa1211600 | MtrunA17_Chr3g0118081 | 25.658 | 304 | 194 | 11 | 188 | 477 | 174 | 459 | 4.72e-12 | 68.6 |
| Msa1211600 | MtrunA17_Chr1g0149961 | 25.836 | 329 | 209 | 13 | 58 | 372 | 22 | 329 | 1.71e-11 | 66.6 |
| Msa1211600 | MtrunA17_Chr8g0365221 | 25.061 | 411 | 271 | 15 | 55 | 451 | 64 | 451 | 2.15e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211600 | AT5G62530.1 | 80.036 | 556 | 109 | 2 | 1 | 554 | 1 | 556 | 0.0 | 950 |
| Msa1211600 | AT1G74920.2 | 26.557 | 305 | 190 | 12 | 188 | 477 | 139 | 424 | 8.79e-13 | 71.2 |
| Msa1211600 | AT1G74920.1 | 26.557 | 305 | 190 | 12 | 188 | 477 | 144 | 429 | 1.06e-12 | 70.9 |
| Msa1211600 | AT1G23800.1 | 25.845 | 414 | 264 | 15 | 55 | 451 | 57 | 444 | 2.53e-12 | 69.7 |
| Msa1211600 | AT3G48000.1 | 24.318 | 440 | 288 | 16 | 55 | 477 | 61 | 472 | 4.65e-11 | 65.9 |
| Msa1211600 | AT1G54100.2 | 23.517 | 489 | 315 | 25 | 56 | 520 | 25 | 478 | 6.70e-11 | 65.1 |
| Msa1211600 | AT1G54100.1 | 23.517 | 489 | 315 | 25 | 56 | 520 | 25 | 478 | 6.70e-11 | 65.1 |
Find 163 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCAGTACATGGTAAA+TGG | 0.102956 | 8_1:-71312010 | Msa1211600:intron |
| TTACCTTGCTGTCGACTTTA+AGG | 0.115406 | 8_1:+71309401 | None:intergenic |
| ATAAATGGCTCTCCATTTAA+AGG | 0.157199 | 8_1:+71311954 | None:intergenic |
| CATTCAATTCCGCAAGTTTA+TGG | 0.168990 | 8_1:-71307608 | Msa1211600:CDS |
| ATTAATGGGTGCTCTTTATA+TGG | 0.169166 | 8_1:-71309437 | Msa1211600:CDS |
| ACCAATTGTGTTGGAGGTTT+TGG | 0.172418 | 8_1:-71307342 | Msa1211600:CDS |
| AGAGAAATCATTTATGATTA+TGG | 0.200880 | 8_1:-71306546 | Msa1211600:CDS |
| ACAATTGTGGATCCTTTAAA+TGG | 0.201066 | 8_1:-71311966 | Msa1211600:CDS |
| GATGGTATGTATCTGATTTC+GGG | 0.233031 | 8_1:+71313299 | None:intergenic |
| TTTGCAAAATACGCATAAAT+AGG | 0.240558 | 8_1:-71313208 | Msa1211600:five_prime_UTR |
| TACCTCTCTGGTGCCTTAAA+AGG | 0.253435 | 8_1:+71311505 | None:intergenic |
| AGATGGTATGTATCTGATTT+CGG | 0.260030 | 8_1:+71313298 | None:intergenic |
| GATTCCAGTCCTTCAATTAA+TGG | 0.260381 | 8_1:-71309452 | Msa1211600:CDS |
| TCTTTGGCAGGTTCGTTTCC+TGG | 0.273141 | 8_1:-71310117 | Msa1211600:intron |
| AGCAGGAAGAACATTGTATT+TGG | 0.275476 | 8_1:+71313032 | None:intergenic |
| ACTATCAAACCCGATATATA+AGG | 0.279609 | 8_1:-71313251 | Msa1211600:five_prime_UTR |
| GCTCTTTGGTGGAGAGCCTT+TGG | 0.303385 | 8_1:-71307636 | Msa1211600:CDS |
| TGTTCCAATCCCTGCACCTC+TGG | 0.305752 | 8_1:+71306602 | None:intergenic |
| TTTGAAGGGCCGCGTTAAAT+TGG | 0.307383 | 8_1:-71308554 | Msa1211600:CDS |
| ACTTCAGCGACTTTAATAAA+TGG | 0.310194 | 8_1:+71311939 | None:intergenic |
| TGCTGCCCAAGATGATTTCC+AGG | 0.324100 | 8_1:+71310077 | None:intergenic |
| TGGATTTGACTGGAAAATAT+TGG | 0.328737 | 8_1:-71308524 | Msa1211600:CDS |
| ATTTCCCAATCCTTTGATAC+TGG | 0.330760 | 8_1:+71306522 | None:intergenic |
| ATCCTTCACAATTTCTTCAA+TGG | 0.335310 | 8_1:+71307556 | None:intergenic |
| ATCTCTAGGGGAAAATTAAA+AGG | 0.335493 | 8_1:+71309472 | None:intergenic |
| AAACGTGGTCCCTTATATAT+CGG | 0.335631 | 8_1:+71313241 | None:intergenic |
| CCGGTGAAAAGGGTCATTCT+TGG | 0.338717 | 8_1:+71308610 | None:intergenic |
| TTGAAGCTCTGGTAAGAAAA+TGG | 0.344474 | 8_1:+71313070 | None:intergenic |
| CTTGTGACAAAAGAAATATT+TGG | 0.358791 | 8_1:-71307521 | Msa1211600:CDS |
| GTGATTGGGAAATCAGTAAA+TGG | 0.361910 | 8_1:-71306797 | Msa1211600:CDS |
| ATAAATTTGCAGGAAGTGAT+TGG | 0.362344 | 8_1:-71306812 | Msa1211600:intron |
| GTTCCAATCCCTGCACCTCT+GGG | 0.363302 | 8_1:+71306603 | None:intergenic |
| ATTCCAGTCCTTCAATTAAT+GGG | 0.374659 | 8_1:-71309451 | Msa1211600:CDS |
| TGATAGCATTTGAGCTGCTT+TGG | 0.380494 | 8_1:+71310749 | None:intergenic |
| GCAGTACCTGGAAATCATCT+TGG | 0.382443 | 8_1:-71310083 | Msa1211600:CDS |
| GTCGCTGAAGTTGACGAAAC+AGG | 0.387767 | 8_1:-71311927 | Msa1211600:CDS |
| GCCGGTGACCCCAGAGGTGC+AGG | 0.388688 | 8_1:-71306612 | Msa1211600:CDS |
| AGAATAAACTTTAGGGAATC+CGG | 0.391591 | 8_1:-71306414 | Msa1211600:three_prime_UTR |
| TCCTTCACAATTTCTTCAAT+GGG | 0.396232 | 8_1:+71307557 | None:intergenic |
| CTCTTGAACTACCGGTGAAA+AGG | 0.398393 | 8_1:+71308599 | None:intergenic |
| AATCATAAATGATTTCTCTA+TGG | 0.402141 | 8_1:+71306550 | None:intergenic |
| GCACCTCTGGGGTCACCGGC+TGG | 0.408608 | 8_1:+71306615 | None:intergenic |
| GGTCTAAGAGCAAGGACAAC+TGG | 0.410303 | 8_1:-71306761 | Msa1211600:CDS |
| GGATTTGACTGGAAAATATT+GGG | 0.410946 | 8_1:-71308523 | Msa1211600:CDS |
| TTCTTTCAACTTAGATATCA+AGG | 0.415463 | 8_1:+71308156 | None:intergenic |
| TAAGAGATTAAGAAGTTAGA+TGG | 0.417272 | 8_1:-71306472 | Msa1211600:three_prime_UTR |
| GGCAGGTTCGTTTCCTGGCT+AGG | 0.419273 | 8_1:-71310112 | Msa1211600:intron |
| ATGGTTCAACATGATGTTGC+AGG | 0.419406 | 8_1:+71313089 | None:intergenic |
| AGAAGAAACCCTTGAAGCTC+TGG | 0.420267 | 8_1:+71313059 | None:intergenic |
| GACCCCAGAGGTGCAGGGAT+TGG | 0.422651 | 8_1:-71306606 | Msa1211600:CDS |
| CCAGGATCAAAGCTGCTCTT+TGG | 0.425852 | 8_1:-71307650 | Msa1211600:CDS |
| TTAATGGGTGCTCTTTATAT+GGG | 0.426793 | 8_1:-71309436 | Msa1211600:CDS |
| AGAGAATTTCTGTGGAGATC+AGG | 0.428216 | 8_1:-71310476 | Msa1211600:intron |
| TCCAAAACCTCCAACACAAT+TGG | 0.429191 | 8_1:+71307341 | None:intergenic |
| CATGGCTTCCGTTGGCCATA+TGG | 0.430033 | 8_1:-71310050 | Msa1211600:CDS |
| AAAATCCTTACCGGACCATA+TGG | 0.433160 | 8_1:+71310035 | None:intergenic |
| GGATTGTGCAAACCATGCTT+GGG | 0.433533 | 8_1:+71311526 | None:intergenic |
| AGGATTGTGCAAACCATGCT+TGG | 0.434635 | 8_1:+71311525 | None:intergenic |
| TATGAAGTCTACATCTTCTA+CGG | 0.434965 | 8_1:+71308950 | None:intergenic |
| TAAGAAACCTGATGGACATC+AGG | 0.435052 | 8_1:+71308499 | None:intergenic |
| CTCCCTTTCCACACCTGAAA+AGG | 0.436204 | 8_1:+71307497 | None:intergenic |
| AATGGGTTGGATCTTCAAAC+TGG | 0.440616 | 8_1:-71311992 | Msa1211600:CDS |
| CTTTGGTGGAGAGCCTTTGG+AGG | 0.444267 | 8_1:-71307633 | Msa1211600:CDS |
| GGACTCAAATTCAGTGATTG+AGG | 0.444703 | 8_1:-71313131 | Msa1211600:five_prime_UTR |
| AACGTGGTCCCTTATATATC+GGG | 0.444888 | 8_1:+71313242 | None:intergenic |
| GTAGAAGCAGAAGAGATATC+TGG | 0.448541 | 8_1:-71312436 | Msa1211600:CDS |
| TCTTTCAGTACATGGTAAAT+GGG | 0.449207 | 8_1:-71312009 | Msa1211600:intron |
| GTTGTAGGTGAGCATTGTTA+TGG | 0.449335 | 8_1:-71309009 | Msa1211600:intron |
| AGGTTTCAGAATTCTTTGTA+AGG | 0.450952 | 8_1:-71310570 | Msa1211600:CDS |
| CATAGGACTCTTCATGTTGA+AGG | 0.451011 | 8_1:+71306495 | None:intergenic |
| TAAATTTGCAGGAAGTGATT+GGG | 0.453863 | 8_1:-71306811 | Msa1211600:intron |
| TTCAAGAGTGGCAGAGAAGT+TGG | 0.455459 | 8_1:-71308584 | Msa1211600:CDS |
| AGTTGACGAAACAGGCGTTC+AGG | 0.455504 | 8_1:-71311919 | Msa1211600:intron |
| ATGGACCAGTATCAAAGGAT+TGG | 0.458365 | 8_1:-71306527 | Msa1211600:CDS |
| GAAGTTGGCGGTTGATTTGA+AGG | 0.459694 | 8_1:-71308569 | Msa1211600:CDS |
| CTGTACAAGCTTTCTGCAAA+GGG | 0.460173 | 8_1:+71311553 | None:intergenic |
| CATAAACTTGCGGAATTGAA+TGG | 0.465340 | 8_1:+71307609 | None:intergenic |
| TGGACCAGTATCAAAGGATT+GGG | 0.469835 | 8_1:-71306526 | Msa1211600:CDS |
| CCCTGCACCTCTGGGGTCAC+CGG | 0.470946 | 8_1:+71306611 | None:intergenic |
| CAGTACCTGGAAATCATCTT+GGG | 0.478137 | 8_1:-71310082 | Msa1211600:CDS |
| AAGCTATCAGACTTGACAAT+TGG | 0.480723 | 8_1:-71308118 | Msa1211600:CDS |
| TCAGTACATGGTAAATGGGT+TGG | 0.480807 | 8_1:-71312005 | Msa1211600:intron |
| AAAGAGCACCCATTAATTGA+AGG | 0.482195 | 8_1:+71309443 | None:intergenic |
| ATTGGGCCCTGATGTCCATC+AGG | 0.486463 | 8_1:-71308506 | Msa1211600:intron |
| CTATCAAACCCGATATATAA+GGG | 0.486746 | 8_1:-71313250 | Msa1211600:five_prime_UTR |
| CGCGTTAAATTGGAAGATGC+TGG | 0.488079 | 8_1:-71308544 | Msa1211600:CDS |
| TCAACTACCAATTGTGTTGG+AGG | 0.488211 | 8_1:-71307348 | Msa1211600:CDS |
| CTCTGCCACTCTTGAACTAC+CGG | 0.489252 | 8_1:+71308591 | None:intergenic |
| AACTTCTTAATCTCTTACAT+AGG | 0.489373 | 8_1:+71306478 | None:intergenic |
| CAGATATGTCTCCATACATA+AGG | 0.489444 | 8_1:+71310772 | None:intergenic |
| TTACAACTCTCACTCACCTT+AGG | 0.490450 | 8_1:-71313152 | Msa1211600:five_prime_UTR |
| CCCAAGTTCAAAACTTCAGC+AGG | 0.491991 | 8_1:+71312406 | None:intergenic |
| ATGGGAACATAAACTGCAGT+TGG | 0.492835 | 8_1:+71307575 | None:intergenic |
| TGGAAGATGCTGGATTTGAC+TGG | 0.493708 | 8_1:-71308534 | Msa1211600:CDS |
| TTTCTACTACTAATTAATAC+CGG | 0.495516 | 8_1:+71306395 | None:intergenic |
| GGATCAAAGCTGCTCTTTGG+TGG | 0.497533 | 8_1:-71307647 | Msa1211600:CDS |
| TAAAGGATCATTTGAAACTA+CGG | 0.502495 | 8_1:+71307292 | None:intergenic |
| GCACCCATTAATTGAAGGAC+TGG | 0.503843 | 8_1:+71309448 | None:intergenic |
| CCAAAGAGCAGCTTTGATCC+TGG | 0.504350 | 8_1:+71307650 | None:intergenic |
| TATAAATATAAGATTGTGAA+GGG | 0.504612 | 8_1:+71306358 | None:intergenic |
| ATTGAAGGACTGGAATCTCT+AGG | 0.504896 | 8_1:+71309458 | None:intergenic |
| ATCACTGAATTTGAGTCCTA+AGG | 0.505351 | 8_1:+71313136 | None:intergenic |
| TTGAAGGACTGGAATCTCTA+GGG | 0.508269 | 8_1:+71309459 | None:intergenic |
| CAATATGAAATTGATTAAGA+TGG | 0.508768 | 8_1:+71313281 | None:intergenic |
| ATCATTGCTATTTATGCATG+AGG | 0.509897 | 8_1:-71308329 | Msa1211600:intron |
| GCTGTACAAGCTTTCTGCAA+AGG | 0.510236 | 8_1:+71311552 | None:intergenic |
| ATAATCTGCACATACCTCTC+TGG | 0.512278 | 8_1:+71311493 | None:intergenic |
| CAGAGGCCATAAAACTTGTA+TGG | 0.512943 | 8_1:-71306578 | Msa1211600:CDS |
| TCTTGAACTACCGGTGAAAA+GGG | 0.517410 | 8_1:+71308600 | None:intergenic |
| GACTCAAATTCAGTGATTGA+GGG | 0.517488 | 8_1:-71313130 | Msa1211600:five_prime_UTR |
| TCAAATGCTATCACTTCCTA+AGG | 0.521310 | 8_1:-71310739 | Msa1211600:intron |
| TTAATACTTACAGTAAGGAC+TGG | 0.527413 | 8_1:+71308094 | None:intergenic |
| CTTCCGTTGGCCATATGGTC+CGG | 0.529377 | 8_1:-71310045 | Msa1211600:intron |
| TGCAGGAAGATTACACTGCA+TGG | 0.538243 | 8_1:-71308402 | Msa1211600:intron |
| CTACGCCTTCTTCATTCCTG+TGG | 0.538358 | 8_1:-71308978 | Msa1211600:CDS |
| CACTGCATGCATATGCATCC+TGG | 0.546703 | 8_1:+71308371 | None:intergenic |
| GTACTGCAAAAGACCTAGCC+AGG | 0.546821 | 8_1:+71310099 | None:intergenic |
| TGATTATGGACCAGTATCAA+AGG | 0.551460 | 8_1:-71306532 | Msa1211600:CDS |
| ATGAAGTCTACATCTTCTAC+GGG | 0.552312 | 8_1:+71308951 | None:intergenic |
| AGCAAAGTCATGGCTTCCGT+TGG | 0.553396 | 8_1:-71310058 | Msa1211600:CDS |
| TTAATTAGTAGTAGAAAATG+AGG | 0.557328 | 8_1:-71306389 | Msa1211600:three_prime_UTR |
| ATCTTCTACGGGTAAGCCAC+AGG | 0.558822 | 8_1:+71308962 | None:intergenic |
| TGGATAGAGGTGTATATGAA+AGG | 0.561339 | 8_1:+71306279 | None:intergenic |
| TTATGCAGGTTTGGACCAGC+CGG | 0.561893 | 8_1:-71306630 | Msa1211600:intron |
| TTCAAACTGGAATACAATTG+TGG | 0.565821 | 8_1:-71311979 | Msa1211600:CDS |
| GTAGACTTCATAAATTGTGA+TGG | 0.568165 | 8_1:-71308939 | Msa1211600:CDS |
| TTGTACAGCTGCCCCAAGCA+TGG | 0.575085 | 8_1:-71311538 | Msa1211600:CDS |
| TTGCTGTCGACTTTAAGGAC+TGG | 0.576840 | 8_1:+71309406 | None:intergenic |
| TATCTCTTCTGCTTCTACTG+TGG | 0.583778 | 8_1:+71312441 | None:intergenic |
| CACTGCATGGGTATGTGACC+AGG | 0.584855 | 8_1:-71308389 | Msa1211600:CDS |
| CATCTTGGGCAGCAAAGTCA+TGG | 0.585436 | 8_1:-71310068 | Msa1211600:CDS |
| TTCCAATCCCTGCACCTCTG+GGG | 0.591917 | 8_1:+71306604 | None:intergenic |
| ATATAAATATAAGATTGTGA+AGG | 0.593194 | 8_1:+71306357 | None:intergenic |
| GCAGGAAGATTACACTGCAT+GGG | 0.593297 | 8_1:-71308401 | Msa1211600:intron |
| TCCCATTGAAGAAATTGTGA+AGG | 0.593537 | 8_1:-71307558 | Msa1211600:CDS |
| CTGGAGCTCCACAAAACCAC+TGG | 0.594668 | 8_1:-71306742 | Msa1211600:intron |
| CAGTCAACTACCAATTGTGT+TGG | 0.596922 | 8_1:-71307351 | Msa1211600:CDS |
| GTAAGCCACAGGAATGAAGA+AGG | 0.598802 | 8_1:+71308973 | None:intergenic |
| AAGAGTGGCAGAGAAGTTGG+CGG | 0.600073 | 8_1:-71308581 | Msa1211600:CDS |
| AAGTTTCTAGAGAATTTCTG+TGG | 0.603606 | 8_1:-71310484 | Msa1211600:CDS |
| AAGTTGGCGGTTGATTTGAA+GGG | 0.609509 | 8_1:-71308568 | Msa1211600:CDS |
| CAGAAGAGATATCTGGTGCA+AGG | 0.621485 | 8_1:-71312429 | Msa1211600:CDS |
| AAGAAACCTGATGGACATCA+GGG | 0.621935 | 8_1:+71308500 | None:intergenic |
| TGAAGGACTGGAATCTCTAG+GGG | 0.623190 | 8_1:+71309460 | None:intergenic |
| TTTCACCGGTAGTTCAAGAG+TGG | 0.623677 | 8_1:-71308596 | Msa1211600:CDS |
| TTAATAGCACCATAAACTTG+CGG | 0.624430 | 8_1:+71307599 | None:intergenic |
| TCTGCTTCTACTGTGGCAAG+TGG | 0.625864 | 8_1:+71312448 | None:intergenic |
| GGAATTGAATGGTCCTCCAA+AGG | 0.635379 | 8_1:+71307620 | None:intergenic |
| CCGGTGACCCCAGAGGTGCA+GGG | 0.637271 | 8_1:-71306611 | Msa1211600:CDS |
| AGTCCTTAAAGTCGACAGCA+AGG | 0.638175 | 8_1:-71309404 | Msa1211600:intron |
| CTTACGCTGGTCTAAGAGCA+AGG | 0.639298 | 8_1:-71306769 | Msa1211600:CDS |
| AATGAACAAGCTGCTACTAG+AGG | 0.654674 | 8_1:-71308910 | Msa1211600:intron |
| GTAAATGGCACTACTTACGC+TGG | 0.656115 | 8_1:-71306782 | Msa1211600:CDS |
| CAGCATCTTCCAATTTAACG+CGG | 0.656213 | 8_1:+71308545 | None:intergenic |
| GGACCAGCCGGTGACCCCAG+AGG | 0.656353 | 8_1:-71306618 | Msa1211600:CDS |
| AGGACTCTTCATGTTGAAGG+AGG | 0.659704 | 8_1:+71306498 | None:intergenic |
| TAATACTTACAGTAAGGACT+GGG | 0.667435 | 8_1:+71308095 | None:intergenic |
| TTACCGGACCATATGGCCAA+CGG | 0.672833 | 8_1:+71310042 | None:intergenic |
| TGCAGGGATTGGAACACCAG+AGG | 0.673651 | 8_1:-71306595 | Msa1211600:CDS |
| GATTGTGCAAACCATGCTTG+GGG | 0.673754 | 8_1:+71311527 | None:intergenic |
| ATAAATATAAGATTGTGAAG+GGG | 0.679512 | 8_1:+71306359 | None:intergenic |
| GCAAATCAAAATCATAAACG+TGG | 0.685083 | 8_1:+71313226 | None:intergenic |
| CAGGATGCATATGCATGCAG+TGG | 0.713797 | 8_1:-71308370 | Msa1211600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTATTTATTTTTAT+GGG | - | chr8_1:71308140-71308159 | Msa1211600:CDS | 0.0% |
| !!! | ATTTTGATGAATTATATTAT+GGG | + | chr8_1:71307392-71307411 | None:intergenic | 10.0% |
| !!! | GTATAATATTTTAATGTAAT+AGG | - | chr8_1:71308666-71308685 | Msa1211600:intron | 10.0% |
| !! | ATATATAATTAATATTCATG+TGG | - | chr8_1:71309731-71309750 | Msa1211600:intron | 10.0% |
| !! | TTCATTGATATATAATATAT+TGG | + | chr8_1:71309827-71309846 | None:intergenic | 10.0% |
| !! | TATATGATAATTACAAATAA+AGG | + | chr8_1:71310821-71310840 | None:intergenic | 10.0% |
| !!! | AATTTTTAATTTTTATTTCC+AGG | - | chr8_1:71312143-71312162 | Msa1211600:intron | 10.0% |
| !! | ATTAAGAAGAAAAATAACAA+TGG | + | chr8_1:71307169-71307188 | None:intergenic | 15.0% |
| !!! | TTGTTATTTTTCTTCTTAAT+AGG | - | chr8_1:71307169-71307188 | Msa1211600:intron | 15.0% |
| !! | TATAAAATGACATTGTAATA+TGG | - | chr8_1:71307347-71307366 | Msa1211600:CDS | 15.0% |
| !!! | GATTTTGATGAATTATATTA+TGG | + | chr8_1:71307393-71307412 | None:intergenic | 15.0% |
| !! | TAATATAATTCATCAAAATC+TGG | - | chr8_1:71307393-71307412 | Msa1211600:intron | 15.0% |
| !! | AAAATACATGTTACTAAAAA+GGG | + | chr8_1:71308636-71308655 | None:intergenic | 15.0% |
| !! | AAATTAAATAAAATCCTTAC+CGG | + | chr8_1:71309513-71309532 | None:intergenic | 15.0% |
| !! | ATATTATATATCAATGAACT+TGG | - | chr8_1:71309829-71309848 | Msa1211600:intron | 15.0% |
| !!! | TGAAAATAATTTTGATTGAA+TGG | - | chr8_1:71310264-71310283 | Msa1211600:intron | 15.0% |
| !! | TCAAAAAAAAAAATACACAA+TGG | + | chr8_1:71310374-71310393 | None:intergenic | 15.0% |
| !! | AATATAATCATGAAGTAAAT+TGG | + | chr8_1:71310724-71310743 | None:intergenic | 15.0% |
| !! | CATCATTATCATATTATAAA+AGG | + | chr8_1:71310870-71310889 | None:intergenic | 15.0% |
| !!! | TTATAATATGATAATGATGT+TGG | - | chr8_1:71310871-71310890 | Msa1211600:intron | 15.0% |
| !! | TGAACTAATATTATAATTAC+AGG | - | chr8_1:71310898-71310917 | Msa1211600:intron | 15.0% |
| !! | AATCTTACTTGTAAAAATAA+AGG | + | chr8_1:71312264-71312283 | None:intergenic | 15.0% |
| !!! | TTTTATGACTCAAATTTATT+TGG | - | chr8_1:71312283-71312302 | Msa1211600:intron | 15.0% |
| !! | TTTATGACTCAAATTTATTT+GGG | - | chr8_1:71312284-71312303 | Msa1211600:intron | 15.0% |
| !!! | AAGTATAATTAACATTTTCA+AGG | + | chr8_1:71312374-71312393 | None:intergenic | 15.0% |
| !! | TGAAAATGTTAATTATACTT+TGG | - | chr8_1:71312374-71312393 | Msa1211600:intron | 15.0% |
| !! | AATAAAAAGAAAGAGTTTAA+TGG | - | chr8_1:71312539-71312558 | Msa1211600:intron | 15.0% |
| !! | ATAAAAAGAAAGAGTTTAAT+GGG | - | chr8_1:71312540-71312559 | Msa1211600:intron | 15.0% |
| !!! | GTTATTTTTTGAAATATTTC+TGG | - | chr8_1:71312654-71312673 | Msa1211600:intron | 15.0% |
| !!! | ATGCATCAATATATATATTT+TGG | + | chr8_1:71312860-71312879 | None:intergenic | 15.0% |
| !!! | AGATTTTTAGAATAAACTTT+AGG | - | chr8_1:71313114-71313133 | Msa1211600:five_prime_UTR | 15.0% |
| !!! | GATTTTTAGAATAAACTTTA+GGG | - | chr8_1:71313115-71313134 | Msa1211600:five_prime_UTR | 15.0% |
| !! | TATAAATATAAGATTGTGAA+GGG | + | chr8_1:71313181-71313200 | None:intergenic | 15.0% |
| !! | ATATAAATATAAGATTGTGA+AGG | + | chr8_1:71313182-71313201 | None:intergenic | 15.0% |
| !! | CAATATGAAATTGATTAAGA+TGG | + | chr8_1:71306258-71306277 | None:intergenic | 20.0% |
| !! | GTTGTAATGTAAACTAAAAA+TGG | + | chr8_1:71306371-71306390 | None:intergenic | 20.0% |
| !!! | AAATTTTGCAGAATTTTGAA+TGG | - | chr8_1:71307201-71307220 | Msa1211600:intron | 20.0% |
| !! | ATAATGAATGAAGATTTAGA+AGG | - | chr8_1:71307226-71307245 | Msa1211600:intron | 20.0% |
| !! | TAATGAATGAAGATTTAGAA+GGG | - | chr8_1:71307227-71307246 | Msa1211600:intron | 20.0% |
| !! | AAAAGGAATATTTCAAGAAA+CGG | + | chr8_1:71307644-71307663 | None:intergenic | 20.0% |
| !! | GTTATACTTATTCTTATCTT+AGG | + | chr8_1:71308552-71308571 | None:intergenic | 20.0% |
| !! | CAAAATACATGTTACTAAAA+AGG | + | chr8_1:71308637-71308656 | None:intergenic | 20.0% |
| !! | TTGTACATAATTTATTCTTC+AGG | - | chr8_1:71308946-71308965 | Msa1211600:CDS | 20.0% |
| !!! | GATAAAGTTAAATTTTTCCA+GGG | + | chr8_1:71309265-71309284 | None:intergenic | 20.0% |
| !!! | TGATAAAGTTAAATTTTTCC+AGG | + | chr8_1:71309266-71309285 | None:intergenic | 20.0% |
| !!! | TATGTTGATTACTATTATTG+TGG | - | chr8_1:71310241-71310260 | Msa1211600:intron | 20.0% |
| !!! | ATTTTTTCGTTCTTTATACA+CGG | - | chr8_1:71311245-71311264 | Msa1211600:intron | 20.0% |
| !! | CTATATTAATACTTACAGTA+AGG | + | chr8_1:71311450-71311469 | None:intergenic | 20.0% |
| !! | CTTACTGTAAGTATTAATAT+AGG | - | chr8_1:71311448-71311467 | Msa1211600:intron | 20.0% |
| !! | AAAAACGATATTAATTGTCT+TGG | + | chr8_1:71311544-71311563 | None:intergenic | 20.0% |
| !! | TAAGAATTTCAAATGAATTG+TGG | + | chr8_1:71311793-71311812 | None:intergenic | 20.0% |
| !! | ATATATATGTCAATGTTAGT+AGG | - | chr8_1:71312313-71312332 | Msa1211600:intron | 20.0% |
| !! | GCAAGAAAATATGATATAAT+AGG | + | chr8_1:71312342-71312361 | None:intergenic | 20.0% |
| !! | ATTTAAAGGATATGTAATGT+GGG | + | chr8_1:71312615-71312634 | None:intergenic | 20.0% |
| !! | AATCATAAATGATTTCTCTA+TGG | + | chr8_1:71312989-71313008 | None:intergenic | 20.0% |
| !! | AGAGAAATCATTTATGATTA+TGG | - | chr8_1:71312990-71313009 | Msa1211600:intron | 20.0% |
| !!! | CTAAAAATCTAAAATTCTCA+GGG | + | chr8_1:71313104-71313123 | None:intergenic | 20.0% |
| !!! | TCTAAAAATCTAAAATTCTC+AGG | + | chr8_1:71313105-71313124 | None:intergenic | 20.0% |
| !! | TTTCTACTACTAATTAATAC+CGG | + | chr8_1:71313144-71313163 | None:intergenic | 20.0% |
| !! | TTAATTAGTAGTAGAAAATG+AGG | - | chr8_1:71313147-71313166 | Msa1211600:five_prime_UTR | 20.0% |
| !! | ATAAATATAAGATTGTGAAG+GGG | + | chr8_1:71313180-71313199 | None:intergenic | 20.0% |
| !!! | AATGCTTACTTTTATCATAA+TGG | + | chr8_1:71313280-71313299 | None:intergenic | 20.0% |
| ! | TTTGCAAAATACGCATAAAT+AGG | - | chr8_1:71306328-71306347 | Msa1211600:three_prime_UTR | 25.0% |
| !! | CTGCTTTCAATAATTTTTCT+CGG | - | chr8_1:71306522-71306541 | Msa1211600:CDS | 25.0% |
| !! | TTTACATCAAGTTTGTTTGA+TGG | - | chr8_1:71306662-71306681 | Msa1211600:intron | 25.0% |
| ! | CCTGCAAGTTATTATAAAAA+AGG | + | chr8_1:71307053-71307072 | None:intergenic | 25.0% |
| !!! | CCTTTTTTATAATAACTTGC+AGG | - | chr8_1:71307050-71307069 | Msa1211600:intron | 25.0% |
| ! | AGAAAAATAACAATGGTATG+TGG | + | chr8_1:71307162-71307181 | None:intergenic | 25.0% |
| ! | AAAATGACATTGTAATATGG+TGG | - | chr8_1:71307350-71307369 | Msa1211600:CDS | 25.0% |
| ! | ACTTAACATGATATTATCCA+AGG | - | chr8_1:71307697-71307716 | Msa1211600:CDS | 25.0% |
| ! | GTAATAAAAGAATACATCCT+TGG | + | chr8_1:71307717-71307736 | None:intergenic | 25.0% |
| ! | AAACACAAATTTCAGTTTGA+AGG | - | chr8_1:71307878-71307897 | Msa1211600:intron | 25.0% |
| ! | TAATCCAAGAAAACATATAC+AGG | + | chr8_1:71308100-71308119 | None:intergenic | 25.0% |
| ! | ATAAATAAATCCAACCTAGA+TGG | + | chr8_1:71308130-71308149 | None:intergenic | 25.0% |
| ! | AATGTGGAAAACATTTGAAA+AGG | + | chr8_1:71308424-71308443 | None:intergenic | 25.0% |
| ! | AGATTACAGAATAAACTTCT+AGG | - | chr8_1:71308461-71308480 | Msa1211600:intron | 25.0% |
| !!! | GAATTCTCACATTCTTATTT+TGG | - | chr8_1:71308688-71308707 | Msa1211600:intron | 25.0% |
| !! | AATATTTTGTGAGATACCTT+AGG | + | chr8_1:71308816-71308835 | None:intergenic | 25.0% |
| ! | AATTAAAGAAGAGAACAACA+GGG | + | chr8_1:71308921-71308940 | None:intergenic | 25.0% |
| ! | AAAATGATATATTCGCCATT+GGG | + | chr8_1:71309126-71309145 | None:intergenic | 25.0% |
| ! | TCTTCATTTCAACAATTCTT+TGG | - | chr8_1:71309403-71309422 | Msa1211600:intron | 25.0% |
| !!! | ATTGGTATATACTGTTTTGA+AGG | - | chr8_1:71309536-71309555 | Msa1211600:intron | 25.0% |
| !!! | AATTGACAATTTTGGAACAA+AGG | + | chr8_1:71309600-71309619 | None:intergenic | 25.0% |
| !!! | ATATTGGCTTGATATACATT+TGG | + | chr8_1:71309811-71309830 | None:intergenic | 25.0% |
| !! | GTTTTACTTAATAACCACAA+AGG | + | chr8_1:71309871-71309890 | None:intergenic | 25.0% |
| ! | TTTGTGTATTGTAATCTCAA+AGG | - | chr8_1:71310008-71310027 | Msa1211600:intron | 25.0% |
| !!! | TAACTTTTGGCTCTAATTTA+AGG | - | chr8_1:71310155-71310174 | Msa1211600:intron | 25.0% |
| ! | AATACATAATTGAGACAAGA+CGG | - | chr8_1:71310198-71310217 | Msa1211600:intron | 25.0% |
| ! | ATTGAATGGTTTATCTTCTT+TGG | - | chr8_1:71310278-71310297 | Msa1211600:intron | 25.0% |
| ! | TTGAATGGTTTATCTTCTTT+GGG | - | chr8_1:71310279-71310298 | Msa1211600:intron | 25.0% |
| ! | CTAATAGTAATAGACACAAT+GGG | + | chr8_1:71310402-71310421 | None:intergenic | 25.0% |
| ! | AACATTTGAATGAGAACAAA+AGG | + | chr8_1:71310666-71310685 | None:intergenic | 25.0% |
| !! | TTTTGTTCTCATTCAAATGT+TGG | - | chr8_1:71310665-71310684 | Msa1211600:intron | 25.0% |
| ! | AAATATTGTAAGAAACCTGA+TGG | + | chr8_1:71311048-71311067 | None:intergenic | 25.0% |
| !! | AGGTTTCTTACAATATTTTG+TGG | - | chr8_1:71311050-71311069 | Msa1211600:intron | 25.0% |
| ! | TTCTTTCAACTTAGATATCA+AGG | + | chr8_1:71311383-71311402 | None:intergenic | 25.0% |
| !! | GTCAAAAACTAATATCGTTT+TGG | + | chr8_1:71311712-71311731 | None:intergenic | 25.0% |
| ! | AAAAATTTACTTGAGATACC+AGG | - | chr8_1:71311868-71311887 | Msa1211600:intron | 25.0% |
| ! | CTTGTGACAAAAGAAATATT+TGG | - | chr8_1:71312015-71312034 | Msa1211600:intron | 25.0% |
| !! | TAAAGGATCATTTGAAACTA+CGG | + | chr8_1:71312247-71312266 | None:intergenic | 25.0% |
| ! | GTACATTATTAGTATCAAGT+CGG | + | chr8_1:71312447-71312466 | None:intergenic | 25.0% |
| ! | TGATACTAATAATGTACGTA+TGG | - | chr8_1:71312450-71312469 | Msa1211600:CDS | 25.0% |
| !! | CTCTTTCTTTTTATTGTTCA+AGG | + | chr8_1:71312534-71312553 | None:intergenic | 25.0% |
| ! | GATTTAAAGGATATGTAATG+TGG | + | chr8_1:71312616-71312635 | None:intergenic | 25.0% |
| ! | CTTTAAATCCAGAAATCAAT+GGG | - | chr8_1:71312627-71312646 | Msa1211600:intron | 25.0% |
| !!! | ATTTCTGGCTTTATTATATG+TGG | - | chr8_1:71312669-71312688 | Msa1211600:intron | 25.0% |
| ! | AATCAGACATGATCATTTAT+GGG | - | chr8_1:71312696-71312715 | Msa1211600:intron | 25.0% |
| ! | AACAATTATTGTGTTTATGC+AGG | - | chr8_1:71312892-71312911 | Msa1211600:intron | 25.0% |
| ! | AACTTCTTAATCTCTTACAT+AGG | + | chr8_1:71313061-71313080 | None:intergenic | 25.0% |
| ! | TAAGAGATTAAGAAGTTAGA+TGG | - | chr8_1:71313064-71313083 | Msa1211600:CDS | 25.0% |
| !!! | ACTTTTATCATAATGGATAG+AGG | + | chr8_1:71313273-71313292 | None:intergenic | 25.0% |
| AGATGGTATGTATCTGATTT+CGG | + | chr8_1:71306241-71306260 | None:intergenic | 30.0% | |
| ACTATCAAACCCGATATATA+AGG | - | chr8_1:71306285-71306304 | Msa1211600:three_prime_UTR | 30.0% | |
| CTATCAAACCCGATATATAA+GGG | - | chr8_1:71306286-71306305 | Msa1211600:three_prime_UTR | 30.0% | |
| GCAAATCAAAATCATAAACG+TGG | + | chr8_1:71306313-71306332 | None:intergenic | 30.0% | |
| CGAGAAAAATTATTGAAAGC+AGG | + | chr8_1:71306524-71306543 | None:intergenic | 30.0% | |
| ! | ATTTTGTTGAAGCTCAAAAG+CGG | - | chr8_1:71306768-71306787 | Msa1211600:CDS | 30.0% |
| ATTACAATAATGAGCTGAAG+TGG | + | chr8_1:71306914-71306933 | None:intergenic | 30.0% | |
| CTCTTAAACAAGTCTTAATG+TGG | - | chr8_1:71307010-71307029 | Msa1211600:intron | 30.0% | |
| ! | ACATTGTAATATGGTGGAAA+AGG | - | chr8_1:71307356-71307375 | Msa1211600:CDS | 30.0% |
| AATGAAACGTTGTGTAATTG+TGG | - | chr8_1:71307474-71307493 | Msa1211600:intron | 30.0% | |
| ATGAAACGTTGTGTAATTGT+GGG | - | chr8_1:71307475-71307494 | Msa1211600:intron | 30.0% | |
| TCTTTCAGTACATGGTAAAT+GGG | - | chr8_1:71307527-71307546 | Msa1211600:CDS | 30.0% | |
| TTCAAACTGGAATACAATTG+TGG | - | chr8_1:71307557-71307576 | Msa1211600:CDS | 30.0% | |
| ACAATTGTGGATCCTTTAAA+TGG | - | chr8_1:71307570-71307589 | Msa1211600:CDS | 30.0% | |
| ATAAATGGCTCTCCATTTAA+AGG | + | chr8_1:71307585-71307604 | None:intergenic | 30.0% | |
| ACTTCAGCGACTTTAATAAA+TGG | + | chr8_1:71307600-71307619 | None:intergenic | 30.0% | |
| !!! | ACAAAACAGAGGTTTTTTCA+GGG | + | chr8_1:71307673-71307692 | None:intergenic | 30.0% |
| ! | GTTAAGTTTTCACAAAACAG+AGG | + | chr8_1:71307684-71307703 | None:intergenic | 30.0% |
| ATTCCATAGTTTGAAGAGTA+AGG | + | chr8_1:71307742-71307761 | None:intergenic | 30.0% | |
| TATGGAATATTAAGTGACCA+AGG | - | chr8_1:71307754-71307773 | Msa1211600:intron | 30.0% | |
| TTCTGTAACGAAATTGAAGA+GGG | + | chr8_1:71308076-71308095 | None:intergenic | 30.0% | |
| TTTCTGTAACGAAATTGAAG+AGG | + | chr8_1:71308077-71308096 | None:intergenic | 30.0% | |
| ! | GAAACCTGTATATGTTTTCT+TGG | - | chr8_1:71308093-71308112 | Msa1211600:intron | 30.0% |
| AATAAACACACAAAGCAAAC+AGG | + | chr8_1:71308187-71308206 | None:intergenic | 30.0% | |
| GATCAGCAAAAGAAACTAAT+TGG | + | chr8_1:71308225-71308244 | None:intergenic | 30.0% | |
| ! | TTCTTTTGCTGATCATTCAT+TGG | - | chr8_1:71308231-71308250 | Msa1211600:intron | 30.0% |
| AAAAAATGCAAAAACCTCTG+GGG | + | chr8_1:71308273-71308292 | None:intergenic | 30.0% | |
| CAAAAAATGCAAAAACCTCT+GGG | + | chr8_1:71308274-71308293 | None:intergenic | 30.0% | |
| ACAAAAAATGCAAAAACCTC+TGG | + | chr8_1:71308275-71308294 | None:intergenic | 30.0% | |
| ! | TTTTCGCTTTCCTTTTCAAA+TGG | - | chr8_1:71308344-71308363 | Msa1211600:CDS | 30.0% |
| ACTCACATTACCATTTGAAA+AGG | + | chr8_1:71308357-71308376 | None:intergenic | 30.0% | |
| ACTTGTTTAGTCAGAAAATG+TGG | + | chr8_1:71308440-71308459 | None:intergenic | 30.0% | |
| !!! | TTATTTTGGCCATCTTTTTG+AGG | - | chr8_1:71308702-71308721 | Msa1211600:intron | 30.0% |
| ! | TTTTGCAGATACCTTATGTA+TGG | - | chr8_1:71308753-71308772 | Msa1211600:intron | 30.0% |
| TTATGTTGTCTGTTTACAGT+AGG | - | chr8_1:71308872-71308891 | Msa1211600:intron | 30.0% | |
| CAATTAAAGAAGAGAACAAC+AGG | + | chr8_1:71308922-71308941 | None:intergenic | 30.0% | |
| AGGTTTCAGAATTCTTTGTA+AGG | - | chr8_1:71308966-71308985 | Msa1211600:CDS | 30.0% | |
| ! | AAGTTTCTAGAGAATTTCTG+TGG | - | chr8_1:71309052-71309071 | Msa1211600:intron | 30.0% |
| GGATATCAATCATTTAGCAA+TGG | + | chr8_1:71309105-71309124 | None:intergenic | 30.0% | |
| CTAAATGATTGATATCCCAA+TGG | - | chr8_1:71309108-71309127 | Msa1211600:intron | 30.0% | |
| GAAAATGATATATTCGCCAT+TGG | + | chr8_1:71309127-71309146 | None:intergenic | 30.0% | |
| ! | CATTTTCTGATACAGAATGA+TGG | - | chr8_1:71309140-71309159 | Msa1211600:intron | 30.0% |
| CAATTGAAGAATACCAAAGT+AGG | + | chr8_1:71309171-71309190 | None:intergenic | 30.0% | |
| ! | AATTGATAGTTACCATTGAC+TGG | - | chr8_1:71309186-71309205 | Msa1211600:intron | 30.0% |
| CATGAACTTCAAAATTTCGT+AGG | + | chr8_1:71309352-71309371 | None:intergenic | 30.0% | |
| CAAAAAGAATAAATCGCCAA+AGG | + | chr8_1:71309380-71309399 | None:intergenic | 30.0% | |
| !!! | GGTTAAGCAAGTTAGTTTTT+AGG | - | chr8_1:71309627-71309646 | Msa1211600:intron | 30.0% |
| TAACATAGAACAACAGTTTG+AGG | - | chr8_1:71309775-71309794 | Msa1211600:intron | 30.0% | |
| TGAGTATCTAATTTCCTTTG+TGG | - | chr8_1:71309854-71309873 | Msa1211600:intron | 30.0% | |
| TACCCCAAAATTTAGATTAG+CGG | - | chr8_1:71309899-71309918 | Msa1211600:intron | 30.0% | |
| TATTGTAATCTCAAAGGTGA+GGG | - | chr8_1:71310014-71310033 | Msa1211600:intron | 30.0% | |
| ! | ATCTCTAGGGGAAAATTAAA+AGG | + | chr8_1:71310067-71310086 | None:intergenic | 30.0% |
| ATTCCAGTCCTTCAATTAAT+GGG | - | chr8_1:71310085-71310104 | Msa1211600:CDS | 30.0% | |
| ! | ATTAATGGGTGCTCTTTATA+TGG | - | chr8_1:71310099-71310118 | Msa1211600:CDS | 30.0% |
| ! | TTAATGGGTGCTCTTTATAT+GGG | - | chr8_1:71310100-71310119 | Msa1211600:CDS | 30.0% |
| CCTAATAGTAATAGACACAA+TGG | + | chr8_1:71310403-71310422 | None:intergenic | 30.0% | |
| CCATTGTGTCTATTACTATT+AGG | - | chr8_1:71310400-71310419 | Msa1211600:intron | 30.0% | |
| TATGAAGTCTACATCTTCTA+CGG | + | chr8_1:71310589-71310608 | None:intergenic | 30.0% | |
| GTAGACTTCATAAATTGTGA+TGG | - | chr8_1:71310597-71310616 | Msa1211600:intron | 30.0% | |
| ATAAGACCCAATAAAATTGC+AGG | + | chr8_1:71310785-71310804 | None:intergenic | 30.0% | |
| TGGATTTGACTGGAAAATAT+TGG | - | chr8_1:71311012-71311031 | Msa1211600:intron | 30.0% | |
| GGATTTGACTGGAAAATATT+GGG | - | chr8_1:71311013-71311032 | Msa1211600:intron | 30.0% | |
| !! | ATCATTGCTATTTATGCATG+AGG | - | chr8_1:71311207-71311226 | Msa1211600:intron | 30.0% |
| AAAGAACGAAAAAATAACCG+AGG | + | chr8_1:71311240-71311259 | None:intergenic | 30.0% | |
| TAGTAAAGACACAGTACATA+AGG | + | chr8_1:71311315-71311334 | None:intergenic | 30.0% | |
| AAAAAGGGAAATTAAAACCC+TGG | + | chr8_1:71311341-71311360 | None:intergenic | 30.0% | |
| !!! | TAATTTCCCTTTTTCAGAAC+TGG | - | chr8_1:71311347-71311366 | Msa1211600:intron | 30.0% |
| TAATACTTACAGTAAGGACT+GGG | + | chr8_1:71311444-71311463 | None:intergenic | 30.0% | |
| TTAATACTTACAGTAAGGAC+TGG | + | chr8_1:71311445-71311464 | None:intergenic | 30.0% | |
| AAGACTTCCGTAAATTTCAA+GGG | + | chr8_1:71311502-71311521 | None:intergenic | 30.0% | |
| TAAGACTTCCGTAAATTTCA+AGG | + | chr8_1:71311503-71311522 | None:intergenic | 30.0% | |
| TGTCCATATTAGCAATAGAA+GGG | + | chr8_1:71311634-71311653 | None:intergenic | 30.0% | |
| ATGTCCATATTAGCAATAGA+AGG | + | chr8_1:71311635-71311654 | None:intergenic | 30.0% | |
| !! | ATATCGTTTTGGATGTACAA+GGG | + | chr8_1:71311701-71311720 | None:intergenic | 30.0% |
| !! | AATATCGTTTTGGATGTACA+AGG | + | chr8_1:71311702-71311721 | None:intergenic | 30.0% |
| TTAATAGCACCATAAACTTG+CGG | + | chr8_1:71311940-71311959 | None:intergenic | 30.0% | |
| TCCTTCACAATTTCTTCAAT+GGG | + | chr8_1:71311982-71312001 | None:intergenic | 30.0% | |
| ATCCTTCACAATTTCTTCAA+TGG | + | chr8_1:71311983-71312002 | None:intergenic | 30.0% | |
| ! | AGAAATATTTGGACCTTTTC+AGG | - | chr8_1:71312026-71312045 | Msa1211600:intron | 30.0% |
| ! | TTTTGTAGTCAGTAATAACC+TGG | + | chr8_1:71312164-71312183 | None:intergenic | 30.0% |
| !! | AAAAGCTGTAACGTTGTTTT+TGG | + | chr8_1:71312417-71312436 | None:intergenic | 30.0% |
| ! | AAAACAACGTTACAGCTTTT+AGG | - | chr8_1:71312417-71312436 | Msa1211600:CDS | 30.0% |
| AATAAATGTCAGTGCAAAGT+TGG | - | chr8_1:71312582-71312601 | Msa1211600:intron | 30.0% | |
| !! | CCATTGATTTCTGGATTTAA+AGG | + | chr8_1:71312629-71312648 | None:intergenic | 30.0% |
| CCTTTAAATCCAGAAATCAA+TGG | - | chr8_1:71312626-71312645 | Msa1211600:intron | 30.0% | |
| CAATCAGACATGATCATTTA+TGG | - | chr8_1:71312695-71312714 | Msa1211600:intron | 30.0% | |
| ATGGGTGAAAATAAATTTGC+AGG | - | chr8_1:71312714-71312733 | Msa1211600:intron | 30.0% | |
| ATAAATTTGCAGGAAGTGAT+TGG | - | chr8_1:71312724-71312743 | Msa1211600:intron | 30.0% | |
| TAAATTTGCAGGAAGTGATT+GGG | - | chr8_1:71312725-71312744 | Msa1211600:intron | 30.0% | |
| TGGTAAGTAGATATCTTTCA+AGG | - | chr8_1:71312814-71312833 | Msa1211600:intron | 30.0% | |
| GGTAAGTAGATATCTTTCAA+GGG | - | chr8_1:71312815-71312834 | Msa1211600:intron | 30.0% | |
| CAAGGGATTTATTTGTTCTT+TGG | - | chr8_1:71312832-71312851 | Msa1211600:intron | 30.0% | |
| TTATTGTGTTTATGCAGGTT+TGG | - | chr8_1:71312897-71312916 | Msa1211600:intron | 30.0% | |
| ! | AGAATAAACTTTAGGGAATC+CGG | - | chr8_1:71313122-71313141 | Msa1211600:five_prime_UTR | 30.0% |
| GATGGTATGTATCTGATTTC+GGG | + | chr8_1:71306240-71306259 | None:intergenic | 35.0% | |
| AAACGTGGTCCCTTATATAT+CGG | + | chr8_1:71306298-71306317 | None:intergenic | 35.0% | |
| ATCACTGAATTTGAGTCCTA+AGG | + | chr8_1:71306403-71306422 | None:intergenic | 35.0% | |
| GACTCAAATTCAGTGATTGA+GGG | - | chr8_1:71306406-71306425 | Msa1211600:three_prime_UTR | 35.0% | |
| ! | TTGAAGCTCTGGTAAGAAAA+TGG | + | chr8_1:71306469-71306488 | None:intergenic | 35.0% |
| ! | ATTTTCTTACCAGAGCTTCA+AGG | - | chr8_1:71306468-71306487 | Msa1211600:three_prime_UTR | 35.0% |
| ! | TTTTCTTACCAGAGCTTCAA+GGG | - | chr8_1:71306469-71306488 | Msa1211600:three_prime_UTR | 35.0% |
| AGCAGGAAGAACATTGTATT+TGG | + | chr8_1:71306507-71306526 | None:intergenic | 35.0% | |
| GGATCAGTTTGATGAAATCA+AGG | - | chr8_1:71306735-71306754 | Msa1211600:intron | 35.0% | |
| ATATGCCTGTGAATGTGATA+TGG | - | chr8_1:71306866-71306885 | Msa1211600:intron | 35.0% | |
| ATCAACCATATCACATTCAC+AGG | + | chr8_1:71306874-71306893 | None:intergenic | 35.0% | |
| AGACAAAACAATCAGAGTGA+TGG | + | chr8_1:71307505-71307524 | None:intergenic | 35.0% | |
| TTGTCTTCTCTTTCAGTACA+TGG | - | chr8_1:71307519-71307538 | Msa1211600:CDS | 35.0% | |
| CTCTTTCAGTACATGGTAAA+TGG | - | chr8_1:71307526-71307545 | Msa1211600:CDS | 35.0% | |
| !!! | CACAAAACAGAGGTTTTTTC+AGG | + | chr8_1:71307674-71307693 | None:intergenic | 35.0% |
| GGGCTGATAAGTCAAAAAAT+TGG | + | chr8_1:71307966-71307985 | None:intergenic | 35.0% | |
| !! | TGGTTTGCACAATCCTTTTA+AGG | - | chr8_1:71308018-71308037 | Msa1211600:intron | 35.0% |
| TGGATTAATGATTGCCATCT+AGG | - | chr8_1:71308113-71308132 | Msa1211600:CDS | 35.0% | |
| TTAATGATTGCCATCTAGGT+TGG | - | chr8_1:71308117-71308136 | Msa1211600:CDS | 35.0% | |
| ! | ACACAAAGCAAACAGGTTTT+CGG | + | chr8_1:71308180-71308199 | None:intergenic | 35.0% |
| ! | TTTTGCTGATCATTCATTGG+TGG | - | chr8_1:71308234-71308253 | Msa1211600:intron | 35.0% |
| !! | AATGTGAGTTGATCTTCAGA+TGG | - | chr8_1:71308368-71308387 | Msa1211600:CDS | 35.0% |
| AGAGGAGTAACTAAAATACC+TGG | - | chr8_1:71308506-71308525 | Msa1211600:intron | 35.0% | |
| GCTTAAGAATACATGATTCC+AGG | + | chr8_1:71308527-71308546 | None:intergenic | 35.0% | |
| ACCTTTAGACCTCAAAAAGA+TGG | + | chr8_1:71308714-71308733 | None:intergenic | 35.0% | |
| CAGATATGTCTCCATACATA+AGG | + | chr8_1:71308767-71308786 | None:intergenic | 35.0% | |
| TCAAATGCTATCACTTCCTA+AGG | - | chr8_1:71308797-71308816 | Msa1211600:intron | 35.0% | |
| TCTGTTTACAGTAGGATAGT+AGG | - | chr8_1:71308880-71308899 | Msa1211600:intron | 35.0% | |
| TTCTCCAAAAAGTTATCAGC+AGG | - | chr8_1:71309003-71309022 | Msa1211600:CDS | 35.0% | |
| ! | AAAGCCTGCTGATAACTTTT+TGG | + | chr8_1:71309010-71309029 | None:intergenic | 35.0% |
| GATCAATATCTACCAGTCAA+TGG | + | chr8_1:71309201-71309220 | None:intergenic | 35.0% | |
| TGAAGTTCATGTCATTCCTT+TGG | - | chr8_1:71309361-71309380 | Msa1211600:intron | 35.0% | |
| CATTTCAACAATTCTTTGGC+AGG | - | chr8_1:71309407-71309426 | Msa1211600:CDS | 35.0% | |
| ! | TATGTGTCATTCACTCACTA+TGG | - | chr8_1:71309571-71309590 | Msa1211600:intron | 35.0% |
| ! | CACGAGGTAATTGACAATTT+TGG | + | chr8_1:71309608-71309627 | None:intergenic | 35.0% |
| CAAAATTGTCAATTACCTCG+TGG | - | chr8_1:71309606-71309625 | Msa1211600:intron | 35.0% | |
| TTTAAGCTCTCTCTACAAGA+TGG | - | chr8_1:71309659-71309678 | Msa1211600:intron | 35.0% | |
| GTATTGTAATCTCAAAGGTG+AGG | - | chr8_1:71310013-71310032 | Msa1211600:intron | 35.0% | |
| GATTCCAGTCCTTCAATTAA+TGG | - | chr8_1:71310084-71310103 | Msa1211600:CDS | 35.0% | |
| !! | AAAGAGCACCCATTAATTGA+AGG | + | chr8_1:71310096-71310115 | None:intergenic | 35.0% |
| CATCTACTTCTATTCTTGCA+TGG | + | chr8_1:71310332-71310351 | None:intergenic | 35.0% | |
| !! | AACCATTGACTCATTGTTGT+AGG | - | chr8_1:71310512-71310531 | Msa1211600:CDS | 35.0% |
| ATGAAGTCTACATCTTCTAC+GGG | + | chr8_1:71310588-71310607 | None:intergenic | 35.0% | |
| ! | ACCTCATCCTGCAATTTTAT+TGG | - | chr8_1:71310775-71310794 | Msa1211600:CDS | 35.0% |
| ! | CCTCATCCTGCAATTTTATT+GGG | - | chr8_1:71310776-71310795 | Msa1211600:CDS | 35.0% |
| ATGTAGTCACGTTCAGATAA+AGG | + | chr8_1:71310844-71310863 | None:intergenic | 35.0% | |
| CTCTATTCTTTCTTGATTGC+AGG | - | chr8_1:71311117-71311136 | Msa1211600:intron | 35.0% | |
| !! | TTGCTATTTATGCATGAGGT+TGG | - | chr8_1:71311211-71311230 | Msa1211600:intron | 35.0% |
| CAAGTTTATCCTAGTTCATG+AGG | + | chr8_1:71311279-71311298 | None:intergenic | 35.0% | |
| ACTGTGTCTTTACTAAATCC+AGG | - | chr8_1:71311320-71311339 | Msa1211600:intron | 35.0% | |
| CTGTGTCTTTACTAAATCCA+GGG | - | chr8_1:71311321-71311340 | Msa1211600:intron | 35.0% | |
| !! | CTTAGACCAGTTCTGAAAAA+GGG | + | chr8_1:71311356-71311375 | None:intergenic | 35.0% |
| !! | TCTTAGACCAGTTCTGAAAA+AGG | + | chr8_1:71311357-71311376 | None:intergenic | 35.0% |
| AAGCTATCAGACTTGACAAT+TGG | - | chr8_1:71311418-71311437 | Msa1211600:intron | 35.0% | |
| CAATGCTCCCTTGAAATTTA+CGG | - | chr8_1:71311492-71311511 | Msa1211600:intron | 35.0% | |
| ACTCCCTTCTATTGCTAATA+TGG | - | chr8_1:71311628-71311647 | Msa1211600:intron | 35.0% | |
| ATTTCTTCCTTTAGTGCACT+TGG | - | chr8_1:71311737-71311756 | Msa1211600:intron | 35.0% | |
| CATAAACTTGCGGAATTGAA+TGG | + | chr8_1:71311930-71311949 | None:intergenic | 35.0% | |
| CATTCAATTCCGCAAGTTTA+TGG | - | chr8_1:71311928-71311947 | Msa1211600:CDS | 35.0% | |
| TCCCATTGAAGAAATTGTGA+AGG | - | chr8_1:71311978-71311997 | Msa1211600:CDS | 35.0% | |
| TAAATCCAGAAATCAATGGG+CGG | - | chr8_1:71312630-71312649 | Msa1211600:intron | 35.0% | |
| GTGATTGGGAAATCAGTAAA+TGG | - | chr8_1:71312739-71312758 | Msa1211600:intron | 35.0% | |
| GAAAGATATCTACTTACCAG+TGG | + | chr8_1:71312813-71312832 | None:intergenic | 35.0% | |
| ! | GCAAGACCATACAAGTTTTA+TGG | + | chr8_1:71312967-71312986 | None:intergenic | 35.0% |
| TGATTATGGACCAGTATCAA+AGG | - | chr8_1:71313004-71313023 | Msa1211600:intron | 35.0% | |
| ATTTCCCAATCCTTTGATAC+TGG | + | chr8_1:71313017-71313036 | None:intergenic | 35.0% | |
| ! | TGGATAGAGGTGTATATGAA+AGG | + | chr8_1:71313260-71313279 | None:intergenic | 35.0% |
| AACGTGGTCCCTTATATATC+GGG | + | chr8_1:71306297-71306316 | None:intergenic | 40.0% | |
| TTACAACTCTCACTCACCTT+AGG | - | chr8_1:71306384-71306403 | Msa1211600:three_prime_UTR | 40.0% | |
| GGACTCAAATTCAGTGATTG+AGG | - | chr8_1:71306405-71306424 | Msa1211600:three_prime_UTR | 40.0% | |
| ATGGTTCAACATGATGTTGC+AGG | + | chr8_1:71306450-71306469 | None:intergenic | 40.0% | |
| ! | TGTTCTGCATGTTTGAGATC+AGG | - | chr8_1:71306714-71306733 | Msa1211600:intron | 40.0% |
| TAAGTGCATGTCCACATTGA+CGG | + | chr8_1:71306842-71306861 | None:intergenic | 40.0% | |
| ! | GCTGAAGTGGCAAAGTATTA+GGG | + | chr8_1:71306901-71306920 | None:intergenic | 40.0% |
| ! | AGCTGAAGTGGCAAAGTATT+AGG | + | chr8_1:71306902-71306921 | None:intergenic | 40.0% |
| TATCTCTTCTGCTTCTACTG+TGG | + | chr8_1:71307098-71307117 | None:intergenic | 40.0% | |
| GTAGAAGCAGAAGAGATATC+TGG | - | chr8_1:71307100-71307119 | Msa1211600:intron | 40.0% | |
| !!! | CCTGCTGAAGTTTTGAACTT+GGG | - | chr8_1:71307130-71307149 | Msa1211600:intron | 40.0% |
| !!! | CTGAAGTTTTGAACTTGGGT+AGG | - | chr8_1:71307134-71307153 | Msa1211600:intron | 40.0% |
| CTTTGATTCTGTCTGCAATG+TGG | - | chr8_1:71307283-71307302 | Msa1211600:CDS | 40.0% | |
| TCAGTACATGGTAAATGGGT+TGG | - | chr8_1:71307531-71307550 | Msa1211600:CDS | 40.0% | |
| !! | AATGGGTTGGATCTTCAAAC+TGG | - | chr8_1:71307544-71307563 | Msa1211600:CDS | 40.0% |
| !!! | TTTTTTCAGGGCTCGACAAA+AGG | + | chr8_1:71307661-71307680 | None:intergenic | 40.0% |
| CCATAGTTTGAAGAGTAAGG+TGG | + | chr8_1:71307739-71307758 | None:intergenic | 40.0% | |
| CCACCTTACTCTTCAAACTA+TGG | - | chr8_1:71307736-71307755 | Msa1211600:intron | 40.0% | |
| AAACCTCTTGTCGAAGCAAT+GGG | + | chr8_1:71307791-71307810 | None:intergenic | 40.0% | |
| TAAACCTCTTGTCGAAGCAA+TGG | + | chr8_1:71307792-71307811 | None:intergenic | 40.0% | |
| AAGGCTATAGATGAGTCGAT+TGG | - | chr8_1:71307897-71307916 | Msa1211600:intron | 40.0% | |
| CTGTACAAGCTTTCTGCAAA+GGG | + | chr8_1:71307986-71308005 | None:intergenic | 40.0% | |
| ATAATCTGCACATACCTCTC+TGG | + | chr8_1:71308046-71308065 | None:intergenic | 40.0% | |
| GATATAGAAACTATCCCCAG+AGG | - | chr8_1:71308256-71308275 | Msa1211600:intron | 40.0% | |
| !! | TGAGTTGATCTTCAGATGGT+TGG | - | chr8_1:71308372-71308391 | Msa1211600:CDS | 40.0% |
| TTTGCAGAAGTCGACTAACT+GGG | + | chr8_1:71308487-71308506 | None:intergenic | 40.0% | |
| !!! | GCCATCTTTTTGAGGTCTAA+AGG | - | chr8_1:71308710-71308729 | Msa1211600:intron | 40.0% |
| TGATAGCATTTGAGCTGCTT+TGG | + | chr8_1:71308790-71308809 | None:intergenic | 40.0% | |
| ! | AAGTTATCAGCAGGCTTTTG+CGG | - | chr8_1:71309012-71309031 | Msa1211600:intron | 40.0% |
| AGAGAATTTCTGTGGAGATC+AGG | - | chr8_1:71309060-71309079 | Msa1211600:intron | 40.0% | |
| ! | AATGATGGAAGAGCCTACTT+TGG | - | chr8_1:71309155-71309174 | Msa1211600:intron | 40.0% |
| GGCTTCATTGAAAGAACTCA+TGG | + | chr8_1:71309229-71309248 | None:intergenic | 40.0% | |
| CAGTACCTGGAAATCATCTT+GGG | - | chr8_1:71309454-71309473 | Msa1211600:CDS | 40.0% | |
| AAAATCCTTACCGGACCATA+TGG | + | chr8_1:71309504-71309523 | None:intergenic | 40.0% | |
| !! | AACTAACTTGCTTAACCACG+AGG | + | chr8_1:71309624-71309643 | None:intergenic | 40.0% |
| ! | CGCCGCTAATCTAAATTTTG+GGG | + | chr8_1:71309904-71309923 | None:intergenic | 40.0% |
| ! | GCGCCGCTAATCTAAATTTT+GGG | + | chr8_1:71309905-71309924 | None:intergenic | 40.0% |
| AACTGCCTGAAGAATTGACA+TGG | + | chr8_1:71309927-71309946 | None:intergenic | 40.0% | |
| TTGAAGGACTGGAATCTCTA+GGG | + | chr8_1:71310080-71310099 | None:intergenic | 40.0% | |
| ATTGAAGGACTGGAATCTCT+AGG | + | chr8_1:71310081-71310100 | None:intergenic | 40.0% | |
| !! | TTACCTTGCTGTCGACTTTA+AGG | + | chr8_1:71310138-71310157 | None:intergenic | 40.0% |
| !! | GGTTTATCTTCTTTGGGATG+AGG | - | chr8_1:71310285-71310304 | Msa1211600:intron | 40.0% |
| TACTTCTATTCTTGCATGGC+AGG | + | chr8_1:71310328-71310347 | None:intergenic | 40.0% | |
| AACAGAAGCAGAGCAAAATG+AGG | + | chr8_1:71310429-71310448 | None:intergenic | 40.0% | |
| ! | GCTCTGCTTCTGTTGAATTT+TGG | - | chr8_1:71310435-71310454 | Msa1211600:intron | 40.0% |
| CACCTACAACAATGAGTCAA+TGG | + | chr8_1:71310517-71310536 | None:intergenic | 40.0% | |
| ! | GTTGTAGGTGAGCATTGTTA+TGG | - | chr8_1:71310527-71310546 | Msa1211600:CDS | 40.0% |
| AATGAACAAGCTGCTACTAG+AGG | - | chr8_1:71310626-71310645 | Msa1211600:intron | 40.0% | |
| CCCAATAAAATTGCAGGATG+AGG | + | chr8_1:71310779-71310798 | None:intergenic | 40.0% | |
| TCTTGAACTACCGGTGAAAA+GGG | + | chr8_1:71310939-71310958 | None:intergenic | 40.0% | |
| !! | AAGTTGGCGGTTGATTTGAA+GGG | - | chr8_1:71310968-71310987 | Msa1211600:intron | 40.0% |
| CAGCATCTTCCAATTTAACG+CGG | + | chr8_1:71310994-71311013 | None:intergenic | 40.0% | |
| ! | AAGAAACCTGATGGACATCA+GGG | + | chr8_1:71311039-71311058 | None:intergenic | 40.0% |
| ! | TAAGAAACCTGATGGACATC+AGG | + | chr8_1:71311040-71311059 | None:intergenic | 40.0% |
| GTTGAATGTCCTCATGAACT+AGG | - | chr8_1:71311267-71311286 | Msa1211600:intron | 40.0% | |
| CAAAGTCAGACACAAAAGCA+TGG | + | chr8_1:71311663-71311682 | None:intergenic | 40.0% | |
| ! | GCTTTTGTGTCTGACTTTGT+TGG | - | chr8_1:71311664-71311683 | Msa1211600:intron | 40.0% |
| TTTGTGTCTGACTTTGTTGG+TGG | - | chr8_1:71311667-71311686 | Msa1211600:intron | 40.0% | |
| TGTTCTTCCAAGTGCACTAA+AGG | + | chr8_1:71311747-71311766 | None:intergenic | 40.0% | |
| ATGGGAACATAAACTGCAGT+TGG | + | chr8_1:71311964-71311983 | None:intergenic | 40.0% | |
| !!! | TATTTGGACCTTTTCAGGTG+TGG | - | chr8_1:71312031-71312050 | Msa1211600:intron | 40.0% |
| CAGTCAACTACCAATTGTGT+TGG | - | chr8_1:71312185-71312204 | Msa1211600:intron | 40.0% | |
| TCAACTACCAATTGTGTTGG+AGG | - | chr8_1:71312188-71312207 | Msa1211600:intron | 40.0% | |
| ! | ACCAATTGTGTTGGAGGTTT+TGG | - | chr8_1:71312194-71312213 | Msa1211600:intron | 40.0% |
| TCCAAAACCTCCAACACAAT+TGG | + | chr8_1:71312198-71312217 | None:intergenic | 40.0% | |
| AAATCCAGAAATCAATGGGC+GGG | - | chr8_1:71312631-71312650 | Msa1211600:intron | 40.0% | |
| !! | TCTACTTACCAGTGGTTTTG+TGG | + | chr8_1:71312805-71312824 | None:intergenic | 40.0% |
| !! | CATACAAGTTTTATGGCCTC+TGG | + | chr8_1:71312960-71312979 | None:intergenic | 40.0% |
| CAGAGGCCATAAAACTTGTA+TGG | - | chr8_1:71312958-71312977 | Msa1211600:intron | 40.0% | |
| ATGGACCAGTATCAAAGGAT+TGG | - | chr8_1:71313009-71313028 | Msa1211600:intron | 40.0% | |
| TGGACCAGTATCAAAGGATT+GGG | - | chr8_1:71313010-71313029 | Msa1211600:intron | 40.0% | |
| CATAGGACTCTTCATGTTGA+AGG | + | chr8_1:71313044-71313063 | None:intergenic | 40.0% | |
| AGAAGAAACCCTTGAAGCTC+TGG | + | chr8_1:71306480-71306499 | None:intergenic | 45.0% | |
| CGAAACTGTGTGTTCGCATT+GGG | - | chr8_1:71306970-71306989 | Msa1211600:intron | 45.0% | |
| CAGAAGAGATATCTGGTGCA+AGG | - | chr8_1:71307107-71307126 | Msa1211600:intron | 45.0% | |
| !!! | GCCTGCTGAAGTTTTGAACT+TGG | - | chr8_1:71307129-71307148 | Msa1211600:intron | 45.0% |
| CCCAAGTTCAAAACTTCAGC+AGG | + | chr8_1:71307133-71307152 | None:intergenic | 45.0% | |
| AATGGGTATAGGCAATGCCT+TGG | + | chr8_1:71307774-71307793 | None:intergenic | 45.0% | |
| CTTGTCGAAGCAATGGGTAT+AGG | + | chr8_1:71307785-71307804 | None:intergenic | 45.0% | |
| ATACCCATTGCTTCGACAAG+AGG | - | chr8_1:71307785-71307804 | Msa1211600:intron | 45.0% | |
| TAAGCCTCTGTGTGTAAGAC+AGG | - | chr8_1:71307823-71307842 | Msa1211600:intron | 45.0% | |
| AAGCCTCTGTGTGTAAGACA+GGG | - | chr8_1:71307824-71307843 | Msa1211600:intron | 45.0% | |
| GCTGTACAAGCTTTCTGCAA+AGG | + | chr8_1:71307987-71308006 | None:intergenic | 45.0% | |
| GATTGTGCAAACCATGCTTG+GGG | + | chr8_1:71308012-71308031 | None:intergenic | 45.0% | |
| GGATTGTGCAAACCATGCTT+GGG | + | chr8_1:71308013-71308032 | None:intergenic | 45.0% | |
| AGGATTGTGCAAACCATGCT+TGG | + | chr8_1:71308014-71308033 | None:intergenic | 45.0% | |
| !!! | ATCCTTTTAAGGCACCAGAG+AGG | - | chr8_1:71308029-71308048 | Msa1211600:intron | 45.0% |
| TACCTCTCTGGTGCCTTAAA+AGG | + | chr8_1:71308034-71308053 | None:intergenic | 45.0% | |
| CTTTGCAGAAGTCGACTAAC+TGG | + | chr8_1:71308488-71308507 | None:intergenic | 45.0% | |
| ! | GTTAGTCGACTTCTGCAAAG+AGG | - | chr8_1:71308488-71308507 | Msa1211600:intron | 45.0% |
| TTCCAGGGACAGAAGAATTC+AGG | + | chr8_1:71309250-71309269 | None:intergenic | 45.0% | |
| GCAGTACCTGGAAATCATCT+TGG | - | chr8_1:71309453-71309472 | Msa1211600:CDS | 45.0% | |
| ! | GGCGCCGCTAATCTAAATTT+TGG | + | chr8_1:71309906-71309925 | None:intergenic | 45.0% |
| CAGACACAGAGACACTCATT+AGG | + | chr8_1:71309951-71309970 | None:intergenic | 45.0% | |
| CTAATGAGTGTCTCTGTGTC+TGG | - | chr8_1:71309949-71309968 | Msa1211600:intron | 45.0% | |
| TGAAGGACTGGAATCTCTAG+GGG | + | chr8_1:71310079-71310098 | None:intergenic | 45.0% | |
| GCACCCATTAATTGAAGGAC+TGG | + | chr8_1:71310091-71310110 | None:intergenic | 45.0% | |
| !! | TTGCTGTCGACTTTAAGGAC+TGG | + | chr8_1:71310133-71310152 | None:intergenic | 45.0% |
| AGTCCTTAAAGTCGACAGCA+AGG | - | chr8_1:71310132-71310151 | Msa1211600:intron | 45.0% | |
| ! | GTCGACAGCAAGGTAACTTT+TGG | - | chr8_1:71310142-71310161 | Msa1211600:intron | 45.0% |
| GTAAGCCACAGGAATGAAGA+AGG | + | chr8_1:71310566-71310585 | None:intergenic | 45.0% | |
| AACAAGCTGCTACTAGAGGT+TGG | - | chr8_1:71310630-71310649 | Msa1211600:intron | 45.0% | |
| ! | CCAAGAATGACCCTTTTCAC+CGG | - | chr8_1:71310926-71310945 | Msa1211600:intron | 45.0% |
| CTCTTGAACTACCGGTGAAA+AGG | + | chr8_1:71310940-71310959 | None:intergenic | 45.0% | |
| TTTCACCGGTAGTTCAAGAG+TGG | - | chr8_1:71310940-71310959 | Msa1211600:intron | 45.0% | |
| TTCAAGAGTGGCAGAGAAGT+TGG | - | chr8_1:71310952-71310971 | Msa1211600:intron | 45.0% | |
| !! | GAAGTTGGCGGTTGATTTGA+AGG | - | chr8_1:71310967-71310986 | Msa1211600:intron | 45.0% |
| TTTGAAGGGCCGCGTTAAAT+TGG | - | chr8_1:71310982-71311001 | Msa1211600:intron | 45.0% | |
| CGCGTTAAATTGGAAGATGC+TGG | - | chr8_1:71310992-71311011 | Msa1211600:intron | 45.0% | |
| TGGAAGATGCTGGATTTGAC+TGG | - | chr8_1:71311002-71311021 | Msa1211600:intron | 45.0% | |
| TGTGGATTCCAGAATGACAC+TGG | - | chr8_1:71311068-71311087 | Msa1211600:intron | 45.0% | |
| ! | ATTCCAGAATGACACTGGCT+CGG | - | chr8_1:71311073-71311092 | Msa1211600:intron | 45.0% |
| TGCAGGAAGATTACACTGCA+TGG | - | chr8_1:71311134-71311153 | Msa1211600:intron | 45.0% | |
| GCAGGAAGATTACACTGCAT+GGG | - | chr8_1:71311135-71311154 | Msa1211600:intron | 45.0% | |
| TTTGGATGTACAAGGGCTCA+TGG | + | chr8_1:71311694-71311713 | None:intergenic | 45.0% | |
| GGAATTGAATGGTCCTCCAA+AGG | + | chr8_1:71311919-71311938 | None:intergenic | 45.0% | |
| !!! | GACCTTTTCAGGTGTGGAAA+GGG | - | chr8_1:71312037-71312056 | Msa1211600:intron | 45.0% |
| AATCCAGAAATCAATGGGCG+GGG | - | chr8_1:71312632-71312651 | Msa1211600:intron | 45.0% | |
| GTAAATGGCACTACTTACGC+TGG | - | chr8_1:71312754-71312773 | Msa1211600:intron | 45.0% | |
| AGGACTCTTCATGTTGAAGG+AGG | + | chr8_1:71313041-71313060 | None:intergenic | 45.0% | |
| !!! | GATTTATTTATTTATTTTTA+TGG | - | chr8_1:71308139-71308158 | Msa1211600:CDS | 5.0% |
| !!! | GATTTTATTTAATTTTAAAT+TGG | - | chr8_1:71309518-71309537 | Msa1211600:intron | 5.0% |
| !!! | TTTTATTTTAATTATATGAA+TGG | - | chr8_1:71311560-71311579 | Msa1211600:intron | 5.0% |
| !!! | AAATTATATTTTGAAAATAA+AGG | + | chr8_1:71312098-71312117 | None:intergenic | 5.0% |
| TGTCGAACTCACCGTCAATG+TGG | - | chr8_1:71306828-71306847 | Msa1211600:intron | 50.0% | |
| GCGAAACTGTGTGTTCGCAT+TGG | - | chr8_1:71306969-71306988 | Msa1211600:intron | 50.0% | |
| TCTGCTTCTACTGTGGCAAG+TGG | + | chr8_1:71307091-71307110 | None:intergenic | 50.0% | |
| GTCGCTGAAGTTGACGAAAC+AGG | - | chr8_1:71307609-71307628 | Msa1211600:CDS | 50.0% | |
| AGTTGACGAAACAGGCGTTC+AGG | - | chr8_1:71307617-71307636 | Msa1211600:CDS | 50.0% | |
| GAACCCTGTCTTACACACAG+AGG | + | chr8_1:71307830-71307849 | None:intergenic | 50.0% | |
| AGCCTGAATTCTTCTGTCCC+TGG | - | chr8_1:71309245-71309264 | Msa1211600:intron | 50.0% | |
| TCACACGCACACACACAACA+AGG | - | chr8_1:71309283-71309302 | Msa1211600:intron | 50.0% | |
| ACGCACACACACAACAAGGA+GGG | - | chr8_1:71309287-71309306 | Msa1211600:intron | 50.0% | |
| TCTTTGGCAGGTTCGTTTCC+TGG | - | chr8_1:71309419-71309438 | Msa1211600:CDS | 50.0% | |
| GTACTGCAAAAGACCTAGCC+AGG | + | chr8_1:71309440-71309459 | None:intergenic | 50.0% | |
| ! | GCTAGGTCTTTTGCAGTACC+TGG | - | chr8_1:71309441-71309460 | Msa1211600:CDS | 50.0% |
| TGCTGCCCAAGATGATTTCC+AGG | + | chr8_1:71309462-71309481 | None:intergenic | 50.0% | |
| CATCTTGGGCAGCAAAGTCA+TGG | - | chr8_1:71309468-71309487 | Msa1211600:CDS | 50.0% | |
| AGCAAAGTCATGGCTTCCGT+TGG | - | chr8_1:71309478-71309497 | Msa1211600:CDS | 50.0% | |
| TTACCGGACCATATGGCCAA+CGG | + | chr8_1:71309497-71309516 | None:intergenic | 50.0% | |
| ! | AAGGTGAGGGTTTGTTCTGC+AGG | - | chr8_1:71310027-71310046 | Msa1211600:intron | 50.0% |
| CTACGCCTTCTTCATTCCTG+TGG | - | chr8_1:71310558-71310577 | Msa1211600:CDS | 50.0% | |
| ATCTTCTACGGGTAAGCCAC+AGG | + | chr8_1:71310577-71310596 | None:intergenic | 50.0% | |
| CCGGTGAAAAGGGTCATTCT+TGG | + | chr8_1:71310929-71310948 | None:intergenic | 50.0% | |
| CTCTGCCACTCTTGAACTAC+CGG | + | chr8_1:71310948-71310967 | None:intergenic | 50.0% | |
| AAGAGTGGCAGAGAAGTTGG+CGG | - | chr8_1:71310955-71310974 | Msa1211600:intron | 50.0% | |
| ! | AAACCGAGCCAGTGTCATTC+TGG | + | chr8_1:71311079-71311098 | None:intergenic | 50.0% |
| CACTGCATGCATATGCATCC+TGG | + | chr8_1:71311168-71311187 | None:intergenic | 50.0% | |
| CAGGATGCATATGCATGCAG+TGG | - | chr8_1:71311166-71311185 | Msa1211600:intron | 50.0% | |
| ! | ATGCATGAGGTTGGTCACCT+CGG | - | chr8_1:71311220-71311239 | Msa1211600:intron | 50.0% |
| ! | CCAAAGAGCAGCTTTGATCC+TGG | + | chr8_1:71311889-71311908 | None:intergenic | 50.0% |
| CCAGGATCAAAGCTGCTCTT+TGG | - | chr8_1:71311886-71311905 | Msa1211600:intron | 50.0% | |
| GGATCAAAGCTGCTCTTTGG+TGG | - | chr8_1:71311889-71311908 | Msa1211600:intron | 50.0% | |
| !!! | GGACCTTTTCAGGTGTGGAA+AGG | - | chr8_1:71312036-71312055 | Msa1211600:intron | 50.0% |
| CTCCCTTTCCACACCTGAAA+AGG | + | chr8_1:71312042-71312061 | None:intergenic | 50.0% | |
| !! | TAACCCCGCCCATTGATTTC+TGG | + | chr8_1:71312638-71312657 | None:intergenic | 50.0% |
| ! | CTTACGCTGGTCTAAGAGCA+AGG | - | chr8_1:71312767-71312786 | Msa1211600:intron | 50.0% |
| GGTCTAAGAGCAAGGACAAC+TGG | - | chr8_1:71312775-71312794 | Msa1211600:intron | 50.0% | |
| TTATGCAGGTTTGGACCAGC+CGG | - | chr8_1:71312906-71312925 | Msa1211600:intron | 50.0% | |
| GTGTGTTCGCATTGGGTGTC+AGG | - | chr8_1:71306977-71306996 | Msa1211600:intron | 55.0% | |
| TTGTACAGCTGCCCCAAGCA+TGG | - | chr8_1:71307998-71308017 | Msa1211600:intron | 55.0% | |
| CACGCACACACACAACAAGG+AGG | - | chr8_1:71309286-71309305 | Msa1211600:intron | 55.0% | |
| CGCACACACACAACAAGGAG+GGG | - | chr8_1:71309288-71309307 | Msa1211600:intron | 55.0% | |
| GCACACACACAACAAGGAGG+GGG | - | chr8_1:71309289-71309308 | Msa1211600:intron | 55.0% | |
| CACACACACAACAAGGAGGG+GGG | - | chr8_1:71309290-71309309 | Msa1211600:intron | 55.0% | |
| CATGGCTTCCGTTGGCCATA+TGG | - | chr8_1:71309486-71309505 | Msa1211600:CDS | 55.0% | |
| CTTCCGTTGGCCATATGGTC+CGG | - | chr8_1:71309491-71309510 | Msa1211600:intron | 55.0% | |
| GTTGGCCATATGGTCCGGTA+AGG | - | chr8_1:71309496-71309515 | Msa1211600:intron | 55.0% | |
| CGGCGCCATGTCAATTCTTC+AGG | - | chr8_1:71309919-71309938 | Msa1211600:intron | 55.0% | |
| ! | GTGAGGGTTTGTTCTGCAGG+TGG | - | chr8_1:71310030-71310049 | Msa1211600:intron | 55.0% |
| ATTGGGCCCTGATGTCCATC+AGG | - | chr8_1:71311030-71311049 | Msa1211600:intron | 55.0% | |
| CACTGCATGGGTATGTGACC+AGG | - | chr8_1:71311147-71311166 | Msa1211600:intron | 55.0% | |
| GCTCTTTGGTGGAGAGCCTT+TGG | - | chr8_1:71311900-71311919 | Msa1211600:intron | 55.0% | |
| CTTTGGTGGAGAGCCTTTGG+AGG | - | chr8_1:71311903-71311922 | Msa1211600:intron | 55.0% | |
| CAGGTGTGGAAAGGGAGACT+TGG | - | chr8_1:71312045-71312064 | Msa1211600:intron | 55.0% | |
| CTGGAGCTCCACAAAACCAC+TGG | - | chr8_1:71312794-71312813 | Msa1211600:intron | 55.0% | |
| TTCCAATCCCTGCACCTCTG+GGG | + | chr8_1:71312935-71312954 | None:intergenic | 55.0% | |
| GTTCCAATCCCTGCACCTCT+GGG | + | chr8_1:71312936-71312955 | None:intergenic | 55.0% | |
| TGTTCCAATCCCTGCACCTC+TGG | + | chr8_1:71312937-71312956 | None:intergenic | 55.0% | |
| TGCAGGGATTGGAACACCAG+AGG | - | chr8_1:71312941-71312960 | Msa1211600:intron | 55.0% | |
| GGCAGGTTCGTTTCCTGGCT+AGG | - | chr8_1:71309424-71309443 | Msa1211600:CDS | 60.0% | |
| ! | GACCCCAGAGGTGCAGGGAT+TGG | - | chr8_1:71312930-71312949 | Msa1211600:intron | 65.0% |
| !! | CCCTGCACCTCTGGGGTCAC+CGG | + | chr8_1:71312928-71312947 | None:intergenic | 70.0% |
| ! | CCGGTGACCCCAGAGGTGCA+GGG | - | chr8_1:71312925-71312944 | Msa1211600:intron | 70.0% |
| GGACCAGCCGGTGACCCCAG+AGG | - | chr8_1:71312918-71312937 | Msa1211600:intron | 75.0% | |
| !! | GCACCTCTGGGGTCACCGGC+TGG | + | chr8_1:71312924-71312943 | None:intergenic | 75.0% |
| ! | GCCGGTGACCCCAGAGGTGC+AGG | - | chr8_1:71312924-71312943 | Msa1211600:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 71306235 | 71313323 | 71306235 | ID=Msa1211600;Name=Msa1211600 |
| chr8_1 | mRNA | 71306235 | 71313323 | 71306235 | ID=Msa1211600-mRNA-1;Parent=Msa1211600;Name=Msa1211600-mRNA-1;_AED=0.11;_eAED=0.11;_QI=223|1|1|1|1|1|16|271|554 |
| chr8_1 | exon | 71306235 | 71306644 | 71306235 | ID=Msa1211600-mRNA-1:exon:23954;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71306743 | 71306822 | 71306743 | ID=Msa1211600-mRNA-1:exon:23953;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71307283 | 71307393 | 71307283 | ID=Msa1211600-mRNA-1:exon:23952;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71307511 | 71307720 | 71307511 | ID=Msa1211600-mRNA-1:exon:23951;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71308105 | 71308194 | 71308105 | ID=Msa1211600-mRNA-1:exon:23950;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71308330 | 71308419 | 71308330 | ID=Msa1211600-mRNA-1:exon:23949;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71308507 | 71308638 | 71308507 | ID=Msa1211600-mRNA-1:exon:23948;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71308911 | 71309024 | 71308911 | ID=Msa1211600-mRNA-1:exon:23947;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71309405 | 71309509 | 71309405 | ID=Msa1211600-mRNA-1:exon:23946;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71310046 | 71310129 | 71310046 | ID=Msa1211600-mRNA-1:exon:23945;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71310477 | 71310590 | 71310477 | ID=Msa1211600-mRNA-1:exon:23944;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71310740 | 71310797 | 71310740 | ID=Msa1211600-mRNA-1:exon:23943;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71311508 | 71311575 | 71311508 | ID=Msa1211600-mRNA-1:exon:23942;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71311920 | 71312023 | 71311920 | ID=Msa1211600-mRNA-1:exon:23941;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71312407 | 71312486 | 71312407 | ID=Msa1211600-mRNA-1:exon:23940;Parent=Msa1211600-mRNA-1 |
| chr8_1 | exon | 71313015 | 71313323 | 71313015 | ID=Msa1211600-mRNA-1:exon:23939;Parent=Msa1211600-mRNA-1 |
| chr8_1 | five_prime_UTR | 71313101 | 71313323 | 71313101 | ID=Msa1211600-mRNA-1:five_prime_utr;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71313015 | 71313100 | 71313015 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71312407 | 71312486 | 71312407 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71311920 | 71312023 | 71311920 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71311508 | 71311575 | 71311508 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71310740 | 71310797 | 71310740 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71310477 | 71310590 | 71310477 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71310046 | 71310129 | 71310046 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71309405 | 71309509 | 71309405 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71308911 | 71309024 | 71308911 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71308507 | 71308638 | 71308507 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71308330 | 71308419 | 71308330 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71308105 | 71308194 | 71308105 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71307511 | 71307720 | 71307511 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71307283 | 71307393 | 71307283 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71306743 | 71306822 | 71306743 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | CDS | 71306506 | 71306644 | 71306506 | ID=Msa1211600-mRNA-1:cds;Parent=Msa1211600-mRNA-1 |
| chr8_1 | three_prime_UTR | 71306235 | 71306505 | 71306235 | ID=Msa1211600-mRNA-1:three_prime_utr;Parent=Msa1211600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
