Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704040 | XP_013447005.1 | 68.110 | 254 | 13 | 3 | 1 | 186 | 1 | 254 | 7.64e-111 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704040 | A0A072TUC9 | 68.110 | 254 | 13 | 3 | 1 | 186 | 1 | 254 | 3.65e-111 | 328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0704000 | Msa0704040 | 0.917450 | 5.230200e-86 | -8.615850e-47 |
| Msa0567680 | Msa0704040 | 0.812958 | 3.262033e-51 | -8.615850e-47 |
| Msa0567700 | Msa0704040 | 0.818121 | 2.312473e-52 | -8.615850e-47 |
| Msa0567720 | Msa0704040 | 0.814522 | 1.475798e-51 | -8.615850e-47 |
| Msa0567970 | Msa0704040 | 0.811526 | 6.698649e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704040 | MtrunA17_Chr8g0386421 | 68.110 | 254 | 13 | 3 | 1 | 186 | 1 | 254 | 7.03e-115 | 328 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704040 | AT2G32500.2 | 49.333 | 150 | 53 | 2 | 62 | 188 | 86 | 235 | 7.60e-42 | 142 |
| Msa0704040 | AT2G32500.1 | 46.094 | 128 | 46 | 2 | 62 | 166 | 86 | 213 | 9.34e-31 | 112 |
Find 75 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATCTGTTTATTGTTTC+GGG | 0.115077 | 4_4:-76125882 | Msa0704040:three_prime_UTR |
| TCCTTACATCTTTATATTCT+TGG | 0.165785 | 4_4:+76126684 | None:intergenic |
| CTGCTATCTGTTTATTGTTT+CGG | 0.203560 | 4_4:-76125883 | Msa0704040:three_prime_UTR |
| TTTCCACTCACATGTTCTTT+TGG | 0.254274 | 4_4:-76126022 | Msa0704040:three_prime_UTR |
| AATGAAGAGACAGTGATTTC+AGG | 0.265594 | 4_4:+76126243 | None:intergenic |
| CTTGAGAACCTTCAAGTAAA+AGG | 0.266883 | 4_4:+76128916 | None:intergenic |
| ACTCTCATCTGATTCTTCTT+TGG | 0.275343 | 4_4:+76129878 | None:intergenic |
| ATGGGTTAGCACAACCAAAT+TGG | 0.289510 | 4_4:+76126762 | None:intergenic |
| TTGGTTGTGCTAACCCATTC+TGG | 0.308418 | 4_4:-76126757 | Msa0704040:three_prime_UTR |
| AATGCATTAGCCAGCTAAAA+AGG | 0.310769 | 4_4:-76130133 | Msa0704040:five_prime_UTR |
| GGAACATGCACTGGCATCTC+TGG | 0.334936 | 4_4:-76127121 | Msa0704040:CDS |
| TCAGATATAAACCGTGAGAT+TGG | 0.359114 | 4_4:+76126797 | None:intergenic |
| GAATTTCAACGAAAGTTCTA+AGG | 0.371566 | 4_4:-76126862 | Msa0704040:CDS |
| TTTCAGCTTGCCAGTGGAAT+GGG | 0.373534 | 4_4:-76129913 | Msa0704040:intron |
| GTAGAAAAGCTGCGAGCATT+TGG | 0.374035 | 4_4:+76126111 | None:intergenic |
| TCATCTGATTCTTCTTTGGT+TGG | 0.376105 | 4_4:+76129882 | None:intergenic |
| TTTCCTCTGATAAGCGAGAT+TGG | 0.384256 | 4_4:+76129829 | None:intergenic |
| TTCTTAAAGCTCAATGTGTC+TGG | 0.392150 | 4_4:-76125908 | Msa0704040:three_prime_UTR |
| TGTCTGCCACTTGAAGTATA+TGG | 0.403988 | 4_4:+76126151 | None:intergenic |
| GATAAGCGAGATTGGAGCTT+TGG | 0.414590 | 4_4:+76129837 | None:intergenic |
| TCTAGCTTATGTGCTCCTGC+AGG | 0.440665 | 4_4:-76129031 | Msa0704040:intron |
| AAAATAAAATTATATTGAAA+AGG | 0.440829 | 4_4:+76125782 | None:intergenic |
| GACAGTGATTTCAGGACAAT+AGG | 0.441297 | 4_4:+76126251 | None:intergenic |
| ATATTAAAAGTGTACCTTGA+AGG | 0.446290 | 4_4:+76125830 | None:intergenic |
| TGGGTTAGCACAACCAAATT+GGG | 0.447015 | 4_4:+76126763 | None:intergenic |
| TTCTGAAACTCAATTGTCAT+AGG | 0.449277 | 4_4:-76125964 | Msa0704040:three_prime_UTR |
| CATTTCTCTGTTGATCCAGT+GGG | 0.450126 | 4_4:-76126224 | Msa0704040:three_prime_UTR |
| AAAGGTAAAGATAGAGGTGT+TGG | 0.454888 | 4_4:+76130023 | None:intergenic |
| ATCTCGCTTATCAGAGGAAA+AGG | 0.455399 | 4_4:-76129826 | Msa0704040:intron |
| AAGGTAAAGATAGAGGTGTT+GGG | 0.456800 | 4_4:+76130024 | None:intergenic |
| CAGATATAAACCGTGAGATT+GGG | 0.460477 | 4_4:+76126798 | None:intergenic |
| TCTTTACCTTTACCTTTACA+AGG | 0.466964 | 4_4:-76130011 | Msa0704040:intron |
| TGAAGTAACTTACCTTGTAA+AGG | 0.483806 | 4_4:+76129999 | None:intergenic |
| GGCTCTTGAACCCATTCCAC+TGG | 0.483835 | 4_4:+76129903 | None:intergenic |
| TCATTTCTCTGTTGATCCAG+TGG | 0.484155 | 4_4:-76126225 | Msa0704040:three_prime_UTR |
| TTGAAAAGGTTACATTGTGT+TGG | 0.487010 | 4_4:+76125796 | None:intergenic |
| AAAGGTAAAGGTAAAGATAG+AGG | 0.496541 | 4_4:+76130017 | None:intergenic |
| TTGTGTAAATTGTACTATCA+AGG | 0.504240 | 4_4:+76127074 | None:intergenic |
| ACAATTGAGTTTCAGAATGT+TGG | 0.505112 | 4_4:+76125970 | None:intergenic |
| ATGTCAAAATCAAACCTTCA+AGG | 0.507168 | 4_4:-76125844 | Msa0704040:three_prime_UTR |
| TGAAAAGGTTACATTGTGTT+GGG | 0.507546 | 4_4:+76125797 | None:intergenic |
| ATGATGTCATACACCAGAAT+GGG | 0.509698 | 4_4:+76126744 | None:intergenic |
| TGAGCAGAAACACGCCCTGC+AGG | 0.514909 | 4_4:+76129016 | None:intergenic |
| ACAGCATGAGTATAGTGGTC+AGG | 0.516130 | 4_4:+76128989 | None:intergenic |
| TACATAAGCTCGGTTCCCAC+TGG | 0.518561 | 4_4:+76126209 | None:intergenic |
| TGTAAACAGCATGAGTATAG+TGG | 0.519619 | 4_4:+76128984 | None:intergenic |
| GACATCATCTTCTGCAGTTG+AGG | 0.521076 | 4_4:-76126729 | Msa0704040:three_prime_UTR |
| TACTTGCCATATACTTCAAG+TGG | 0.529494 | 4_4:-76126157 | Msa0704040:three_prime_UTR |
| TAACCAGGCGGAACATGCAC+TGG | 0.530562 | 4_4:-76127130 | Msa0704040:intron |
| AACTTACCTTGTAAAGGTAA+AGG | 0.535195 | 4_4:+76130005 | None:intergenic |
| GATGATGTCATACACCAGAA+TGG | 0.544398 | 4_4:+76126743 | None:intergenic |
| TTTCTACTTGAAATGTGACT+TGG | 0.549173 | 4_4:-76126095 | Msa0704040:three_prime_UTR |
| ATGTGAGTGGAAATAGAAGC+AGG | 0.552159 | 4_4:+76126032 | None:intergenic |
| AGTTCTAAGGAGTATACTCA+TGG | 0.556075 | 4_4:-76126849 | Msa0704040:CDS |
| GTGATTTCAGGACAATAGGC+TGG | 0.558184 | 4_4:+76126255 | None:intergenic |
| ATCTCTGGCAACAGTGATGT+TGG | 0.558570 | 4_4:-76127106 | Msa0704040:CDS |
| CTAGCTTATGTGCTCCTGCA+GGG | 0.560601 | 4_4:-76129030 | Msa0704040:intron |
| GTAGTGATACGATTTCGATC+AGG | 0.566672 | 4_4:-76126825 | Msa0704040:CDS |
| CGAAACAATAAACAGATAGC+AGG | 0.568699 | 4_4:+76125884 | None:intergenic |
| GTTTCAGGGATTAATTAATG+TGG | 0.569081 | 4_4:-76128766 | Msa0704040:intron |
| ATCAGGTGATCCCAATCTCA+CGG | 0.579743 | 4_4:-76126808 | Msa0704040:CDS |
| ATGATTTATATATTTCGCAA+AGG | 0.580470 | 4_4:-76128717 | Msa0704040:CDS |
| AGGTAAAGATAGAGGTGTTG+GGG | 0.581375 | 4_4:+76130025 | None:intergenic |
| GTAAATTGTACTATCAAGGA+AGG | 0.603275 | 4_4:+76127078 | None:intergenic |
| ATACTCATGCTGTTTACATG+CGG | 0.603282 | 4_4:-76128979 | Msa0704040:CDS |
| TTATCCTCACTACATAAGCT+CGG | 0.606028 | 4_4:+76126199 | None:intergenic |
| TTATATATTTCGCAAAGGAG+AGG | 0.620757 | 4_4:-76128712 | Msa0704040:intron |
| GCTCCAATCTCGCTTATCAG+AGG | 0.623806 | 4_4:-76129832 | Msa0704040:CDS |
| TAGCCAAAAGAACATGTGAG+TGG | 0.632547 | 4_4:+76126019 | None:intergenic |
| GGTGTTGGGGTGAATTGACG+AGG | 0.673613 | 4_4:+76130038 | None:intergenic |
| GGAACCGAGCTTATGTAGTG+AGG | 0.674016 | 4_4:-76126203 | Msa0704040:three_prime_UTR |
| GCTGCGTATAAATATCTCGA+AGG | 0.686766 | 4_4:+76126706 | None:intergenic |
| TTGATAGTACAATTTACACA+AGG | 0.690159 | 4_4:-76127072 | Msa0704040:intron |
| GTTAGCACAACCAAATTGGG+AGG | 0.693246 | 4_4:+76126766 | None:intergenic |
| GTGTTGGGGTGAATTGACGA+GGG | 0.732265 | 4_4:+76130039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTCAGTTTTTTTTTTA+AGG | + | chr4_4:76129469-76129488 | None:intergenic | 10.0% |
| !! | AATATAAACTAAACTATATT+TGG | - | chr4_4:76129530-76129549 | Msa0704040:intron | 10.0% |
| !! | TAATAATGTTATTACGTATT+AGG | - | chr4_4:76126053-76126072 | Msa0704040:three_prime_UTR | 15.0% |
| !!! | TATCTATTTTTTTCAACATT+AGG | - | chr4_4:76126643-76126662 | Msa0704040:intron | 15.0% |
| !! | TTTCTCATTAAATGAAATTA+AGG | + | chr4_4:76127355-76127374 | None:intergenic | 15.0% |
| !! | GTTATTAATATTTAATTGTC+AGG | - | chr4_4:76128043-76128062 | Msa0704040:intron | 15.0% |
| !! | TTTCTCATTAAATGAAATTA+AGG | + | chr4_4:76127355-76127374 | None:intergenic | 15.0% |
| !! | GTTATTAATATTTAATTGTC+AGG | - | chr4_4:76128043-76128062 | Msa0704040:intron | 15.0% |
| !!! | TAAAACATTATTTTATGCTT+AGG | - | chr4_4:76129199-76129218 | Msa0704040:intron | 15.0% |
| !! | AATCATAATGACATGAAAAA+TGG | + | chr4_4:76126089-76126108 | None:intergenic | 20.0% |
| !!! | AAATTTAAGTTAGTTTAACG+AGG | - | chr4_4:76126279-76126298 | Msa0704040:intron | 20.0% |
| !!! | ACAACATTTACTTTGTTATT+AGG | - | chr4_4:76126338-76126357 | Msa0704040:intron | 20.0% |
| !!! | ATTAAACTAACCTTGTTTTT+TGG | + | chr4_4:76126515-76126534 | None:intergenic | 20.0% |
| !!! | ACAAGGTTAGTTTAATATTT+AGG | - | chr4_4:76126519-76126538 | Msa0704040:intron | 20.0% |
| !! | ATGATTTATATATTTCGCAA+AGG | - | chr4_4:76127121-76127140 | Msa0704040:CDS | 20.0% |
| !!! | TCTTTTGATATCATTTAATG+AGG | - | chr4_4:76127768-76127787 | Msa0704040:intron | 20.0% |
| !!! | CTTTTGATATCATTTAATGA+GGG | - | chr4_4:76127769-76127788 | Msa0704040:intron | 20.0% |
| !! | TAAAAGATCTAATTACACAA+CGG | + | chr4_4:76127933-76127952 | None:intergenic | 20.0% |
| !!! | TGTAATTAGATCTTTTAACA+TGG | - | chr4_4:76127936-76127955 | Msa0704040:intron | 20.0% |
| !!! | TCTTTTGATATCATTTAATG+AGG | - | chr4_4:76127768-76127787 | Msa0704040:intron | 20.0% |
| !!! | CTTTTGATATCATTTAATGA+GGG | - | chr4_4:76127769-76127788 | Msa0704040:intron | 20.0% |
| !! | TAAAAGATCTAATTACACAA+CGG | + | chr4_4:76127933-76127952 | None:intergenic | 20.0% |
| !!! | TGTAATTAGATCTTTTAACA+TGG | - | chr4_4:76127936-76127955 | Msa0704040:intron | 20.0% |
| !! | TGTAAAATGTATTTATCTAC+AGG | + | chr4_4:76129429-76129448 | None:intergenic | 20.0% |
| !! | AACTAAACTATATTTGGATT+TGG | - | chr4_4:76129536-76129555 | Msa0704040:intron | 20.0% |
| !!! | AATACATCAGATTTTTCTAT+TGG | - | chr4_4:76130103-76130122 | Msa0704040:exon | 20.0% |
| !!! | ACAGTTTCTTTATTTTTGAA+AGG | - | chr4_4:76130133-76130152 | Msa0704040:five_prime_UTR | 20.0% |
| !!! | GGTATTATTGCTATTTCATT+AGG | - | chr4_4:76126254-76126273 | Msa0704040:three_prime_UTR | 25.0% |
| ! | ATTCTAGATGAAATTCATGT+GGG | + | chr4_4:76126426-76126445 | None:intergenic | 25.0% |
| !! | AGTTTTCATAGAACTTTTCA+AGG | + | chr4_4:76126902-76126921 | None:intergenic | 25.0% |
| ! | AAAATAAAGGAAAAGAGAGT+CGG | + | chr4_4:76126993-76127012 | None:intergenic | 25.0% |
| !!! | CTCTCTTTTCCTTTATTTTT+CGG | - | chr4_4:76126994-76127013 | Msa0704040:intron | 25.0% |
| ! | TAAGAGTAACCGAAAAATAA+AGG | + | chr4_4:76127006-76127025 | None:intergenic | 25.0% |
| ! | CTCATTAAATGAAATTAAGG+TGG | + | chr4_4:76127352-76127371 | None:intergenic | 25.0% |
| ! | TTCCTATATACTTCAATCTT+AGG | - | chr4_4:76127497-76127516 | Msa0704040:intron | 25.0% |
| ! | ATCCTAAGATTGAAGTATAT+AGG | + | chr4_4:76127502-76127521 | None:intergenic | 25.0% |
| !! | AAAGTAGTGTTGTTAAATAG+CGG | + | chr4_4:76127703-76127722 | None:intergenic | 25.0% |
| ! | TTCTGTAAATTGTACTATCA+AGG | + | chr4_4:76127860-76127879 | None:intergenic | 25.0% |
| !! | TTGATAGTACAATTTACAGA+AGG | - | chr4_4:76127859-76127878 | Msa0704040:intron | 25.0% |
| ! | AACATTTGAATAAATGTTGG+TGG | + | chr4_4:76127898-76127917 | None:intergenic | 25.0% |
| ! | AGTAGAAAATCAAAACATAC+TGG | + | chr4_4:76128020-76128039 | None:intergenic | 25.0% |
| ! | CTCATTAAATGAAATTAAGG+TGG | + | chr4_4:76127352-76127371 | None:intergenic | 25.0% |
| !! | AAAGTAGTGTTGTTAAATAG+CGG | + | chr4_4:76127703-76127722 | None:intergenic | 25.0% |
| ! | TTGTGTAAATTGTACTATCA+AGG | + | chr4_4:76128767-76128786 | None:intergenic | 25.0% |
| !! | TTGATAGTACAATTTACACA+AGG | - | chr4_4:76128766-76128785 | Msa0704040:intron | 25.0% |
| ! | AGTAGAAAATCAAAACATAC+TGG | + | chr4_4:76128020-76128039 | None:intergenic | 25.0% |
| ! | TCCTTACATCTTTATATTCT+TGG | + | chr4_4:76129157-76129176 | None:intergenic | 25.0% |
| !! | TATATTTGGATTTGGTAAAC+AGG | - | chr4_4:76129544-76129563 | Msa0704040:intron | 25.0% |
| !! | ATATTAAAAGTGTACCTTGA+AGG | + | chr4_4:76130011-76130030 | None:intergenic | 25.0% |
| AAAGGTAAAGGTAAAGATAG+AGG | + | chr4_4:76125824-76125843 | None:intergenic | 30.0% | |
| TCTTTACCTTTACCTTTACA+AGG | - | chr4_4:76125827-76125846 | Msa0704040:three_prime_UTR | 30.0% | |
| AACTTACCTTGTAAAGGTAA+AGG | + | chr4_4:76125836-76125855 | None:intergenic | 30.0% | |
| TGAAGTAACTTACCTTGTAA+AGG | + | chr4_4:76125842-76125861 | None:intergenic | 30.0% | |
| TTCATGTAGAAGAAAAGTTG+TGG | - | chr4_4:76126136-76126155 | Msa0704040:three_prime_UTR | 30.0% | |
| AAAGGAGAAATTATCTGAAG+AGG | - | chr4_4:76126181-76126200 | Msa0704040:three_prime_UTR | 30.0% | |
| TACACAACCCAATATCAAAT+GGG | - | chr4_4:76126230-76126249 | Msa0704040:three_prime_UTR | 30.0% | |
| AATACCACCCATTTGATATT+GGG | + | chr4_4:76126240-76126259 | None:intergenic | 30.0% | |
| TAATACCACCCATTTGATAT+TGG | + | chr4_4:76126241-76126260 | None:intergenic | 30.0% | |
| ACACTCAAACACATTGAATT+GGG | - | chr4_4:76126380-76126399 | Msa0704040:intron | 30.0% | |
| CATTCTAGATGAAATTCATG+TGG | + | chr4_4:76126427-76126446 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTTTGGTAATAGA+TGG | + | chr4_4:76126505-76126524 | None:intergenic | 30.0% |
| CCATCTATTACCAAAAAACA+AGG | - | chr4_4:76126502-76126521 | Msa0704040:intron | 30.0% | |
| TGTGTTCTACATGTTACATT+TGG | + | chr4_4:76126553-76126572 | None:intergenic | 30.0% | |
| GATCCAGAAAGAACAAAAAA+AGG | - | chr4_4:76126734-76126753 | Msa0704040:three_prime_UTR | 30.0% | |
| !!! | TAGCCTTTTTTTGTTCTTTC+TGG | + | chr4_4:76126740-76126759 | None:intergenic | 30.0% |
| ! | TGAAAACTCCTTTTACTTGA+AGG | - | chr4_4:76126914-76126933 | Msa0704040:intron | 30.0% |
| !!! | ACCTTTACTGATTTTGTTTC+AGG | - | chr4_4:76127057-76127076 | Msa0704040:intron | 30.0% |
| !!! | CCTTTACTGATTTTGTTTCA+GGG | - | chr4_4:76127058-76127077 | Msa0704040:intron | 30.0% |
| GTTTCAGGGATTAATTAATG+TGG | - | chr4_4:76127072-76127091 | Msa0704040:intron | 30.0% | |
| TTATATATTTCGCAAAGGAG+AGG | - | chr4_4:76127126-76127145 | Msa0704040:CDS | 30.0% | |
| !! | CTGATTTACTTTTCCTCTTA+TGG | - | chr4_4:76127155-76127174 | Msa0704040:intron | 30.0% |
| TCAATTTATCGATCCATAAG+AGG | + | chr4_4:76127171-76127190 | None:intergenic | 30.0% | |
| CAATTCATATTTGACCATAG+AGG | - | chr4_4:76127214-76127233 | Msa0704040:intron | 30.0% | |
| ! | TTTAAATGAATTTTGTCGCC+AGG | - | chr4_4:76127720-76127739 | Msa0704040:intron | 30.0% |
| GTAAATTGTACTATCAAGGA+AGG | + | chr4_4:76127856-76127875 | None:intergenic | 30.0% | |
| GGCAACATTTGAATAAATGT+TGG | + | chr4_4:76127901-76127920 | None:intergenic | 30.0% | |
| !! | GATCTTTTAACATGGTTTGT+TGG | - | chr4_4:76127944-76127963 | Msa0704040:intron | 30.0% |
| !!! | AACAGTTCATTGTTTTGACA+AGG | - | chr4_4:76127973-76127992 | Msa0704040:intron | 30.0% |
| GAATTTCAACGAAAGTTCTA+AGG | - | chr4_4:76128069-76128088 | Msa0704040:intron | 30.0% | |
| CAGATATAAACCATGAGATT+GGG | + | chr4_4:76128136-76128155 | None:intergenic | 30.0% | |
| TCAGATATAAACCATGAGAT+TGG | + | chr4_4:76128137-76128156 | None:intergenic | 30.0% | |
| TTCCTATATACTTCAGTCTT+AGG | - | chr4_4:76128404-76128423 | Msa0704040:intron | 30.0% | |
| ATCCTAAGACTGAAGTATAT+AGG | + | chr4_4:76128409-76128428 | None:intergenic | 30.0% | |
| ! | TTTAAATGAATTTTGTCGCC+AGG | - | chr4_4:76127720-76127739 | Msa0704040:intron | 30.0% |
| GTAAATTGTACTATCAAGGA+AGG | + | chr4_4:76127856-76127875 | None:intergenic | 30.0% | |
| AACATCTGAATAAATGTTGG+TGG | + | chr4_4:76128805-76128824 | None:intergenic | 30.0% | |
| !! | GATCTTTTAACATGGTTTGT+TGG | - | chr4_4:76127944-76127963 | Msa0704040:intron | 30.0% |
| !!! | AACAGTTCATTGTTTTGACA+AGG | - | chr4_4:76127973-76127992 | Msa0704040:intron | 30.0% |
| GAATTTCAACGAAAGTTCTA+AGG | - | chr4_4:76128069-76128088 | Msa0704040:intron | 30.0% | |
| !!! | GATTTTTTTTCCTCCCAATT+TGG | - | chr4_4:76129062-76129081 | Msa0704040:intron | 30.0% |
| GCCAAGAATATAAAGATGTA+AGG | - | chr4_4:76129153-76129172 | Msa0704040:intron | 30.0% | |
| ATCCCGAGTTATATAGTTTA+CGG | + | chr4_4:76129254-76129273 | None:intergenic | 30.0% | |
| TATAACTCGGGATATTTGTT+TGG | - | chr4_4:76129261-76129280 | Msa0704040:intron | 30.0% | |
| ATAACTCGGGATATTTGTTT+GGG | - | chr4_4:76129262-76129281 | Msa0704040:intron | 30.0% | |
| TTTCTACTTGAAATGTGACT+TGG | - | chr4_4:76129743-76129762 | Msa0704040:intron | 30.0% | |
| !! | TTTTAGGAACAAGGAACATA+TGG | - | chr4_4:76129777-76129796 | Msa0704040:intron | 30.0% |
| ACAATTGAGTTTCAGAATGT+TGG | + | chr4_4:76129871-76129890 | None:intergenic | 30.0% | |
| !! | TTCTGAAACTCAATTGTCAT+AGG | - | chr4_4:76129874-76129893 | Msa0704040:CDS | 30.0% |
| CTGCTATCTGTTTATTGTTT+CGG | - | chr4_4:76129955-76129974 | Msa0704040:intron | 30.0% | |
| TGCTATCTGTTTATTGTTTC+GGG | - | chr4_4:76129956-76129975 | Msa0704040:intron | 30.0% | |
| ATGTCAAAATCAAACCTTCA+AGG | - | chr4_4:76129994-76130013 | Msa0704040:intron | 30.0% | |
| TGAAAAGGTTACATTGTGTT+GGG | + | chr4_4:76130044-76130063 | None:intergenic | 30.0% | |
| TTGAAAAGGTTACATTGTGT+TGG | + | chr4_4:76130045-76130064 | None:intergenic | 30.0% | |
| AATGCATTAGCCAGCTAAAA+AGG | - | chr4_4:76125705-76125724 | Msa0704040:three_prime_UTR | 35.0% | |
| !! | ATTTTCACTGCCTTTTTAGC+TGG | + | chr4_4:76125718-76125737 | None:intergenic | 35.0% |
| !! | AAGGTAAAGATAGAGGTGTT+GGG | + | chr4_4:76125817-76125836 | None:intergenic | 35.0% |
| ! | AAAGGTAAAGATAGAGGTGT+TGG | + | chr4_4:76125818-76125837 | None:intergenic | 35.0% |
| TCATCTGATTCTTCTTTGGT+TGG | + | chr4_4:76125959-76125978 | None:intergenic | 35.0% | |
| ACTCTCATCTGATTCTTCTT+TGG | + | chr4_4:76125963-76125982 | None:intergenic | 35.0% | |
| GTACACAACCCAATATCAAA+TGG | - | chr4_4:76126229-76126248 | Msa0704040:three_prime_UTR | 35.0% | |
| CACACTCAAACACATTGAAT+TGG | - | chr4_4:76126379-76126398 | Msa0704040:intron | 35.0% | |
| TGTAAACAGCATGAGTATAG+TGG | + | chr4_4:76126857-76126876 | None:intergenic | 35.0% | |
| ! | ATACTCATGCTGTTTACATG+CGG | - | chr4_4:76126859-76126878 | Msa0704040:CDS | 35.0% |
| CTTGAGAACCTTCAAGTAAA+AGG | + | chr4_4:76126925-76126944 | None:intergenic | 35.0% | |
| ! | CTTTTACTTGAAGGTTCTCA+AGG | - | chr4_4:76126923-76126942 | Msa0704040:intron | 35.0% |
| TTTACATGTTGGTGCATACA+TGG | + | chr4_4:76126968-76126987 | None:intergenic | 35.0% | |
| !! | TCCTTATGAACGTTTTGACA+CGG | - | chr4_4:76127034-76127053 | Msa0704040:intron | 35.0% |
| CCCTGAAACAAAATCAGTAA+AGG | + | chr4_4:76127061-76127080 | None:intergenic | 35.0% | |
| TTAGTACTCACTCTCTTCAT+TGG | - | chr4_4:76127270-76127289 | Msa0704040:intron | 35.0% | |
| TTCATTGGATGAGATCAATG+TGG | - | chr4_4:76127285-76127304 | Msa0704040:intron | 35.0% | |
| GTAATAGATCCCACATTAAG+TGG | + | chr4_4:76127317-76127336 | None:intergenic | 35.0% | |
| TGGGATCTATTACAAAGTGT+GGG | - | chr4_4:76127324-76127343 | Msa0704040:intron | 35.0% | |
| AAAATGAACATAGTTGCTCC+TGG | - | chr4_4:76127460-76127479 | Msa0704040:intron | 35.0% | |
| AAATGAACATAGTTGCTCCT+GGG | - | chr4_4:76127461-76127480 | Msa0704040:intron | 35.0% | |
| TTGACTAATAGCAGCTATAG+TGG | + | chr4_4:76127598-76127617 | None:intergenic | 35.0% | |
| ! | GTGATTTGTACAAATTCCAG+TGG | - | chr4_4:76127651-76127670 | Msa0704040:intron | 35.0% |
| !! | TCATTTAATGAGGGTACCTT+AGG | - | chr4_4:76127778-76127797 | Msa0704040:intron | 35.0% |
| !! | AGTTCTAAGGAGTATACTCA+TGG | - | chr4_4:76128082-76128101 | Msa0704040:intron | 35.0% |
| TTAGTACTCACTCTCTTCAT+TGG | - | chr4_4:76127270-76127289 | Msa0704040:intron | 35.0% | |
| TTCATTGGATGAGATCAATG+TGG | - | chr4_4:76127285-76127304 | Msa0704040:intron | 35.0% | |
| GTAATAGATCCCACATTAAG+TGG | + | chr4_4:76127317-76127336 | None:intergenic | 35.0% | |
| TGGGATCTATTACAAAGTGT+GGG | - | chr4_4:76127324-76127343 | Msa0704040:intron | 35.0% | |
| AAAATGAACATAGTTGCTCC+TGG | - | chr4_4:76127460-76127479 | Msa0704040:intron | 35.0% | |
| AAATGAACATAGTTGCTCCT+GGG | - | chr4_4:76127461-76127480 | Msa0704040:intron | 35.0% | |
| TTGACTAATAGCAGCTATAG+TGG | + | chr4_4:76127598-76127617 | None:intergenic | 35.0% | |
| ! | GTGATTTGTACAAATTCCAG+TGG | - | chr4_4:76127651-76127670 | Msa0704040:intron | 35.0% |
| AAAGAATAAACTCCACTCCA+TGG | + | chr4_4:76128660-76128679 | None:intergenic | 35.0% | |
| !! | TCATTTAATGAGGGTACCTT+AGG | - | chr4_4:76127778-76127797 | Msa0704040:intron | 35.0% |
| GGCAACATCTGAATAAATGT+TGG | + | chr4_4:76128808-76128827 | None:intergenic | 35.0% | |
| !! | AGTTCTAAGGAGTATACTCA+TGG | - | chr4_4:76128082-76128101 | Msa0704040:intron | 35.0% |
| CAGATATAAACCGTGAGATT+GGG | + | chr4_4:76129043-76129062 | None:intergenic | 35.0% | |
| TCAGATATAAACCGTGAGAT+TGG | + | chr4_4:76129044-76129063 | None:intergenic | 35.0% | |
| ATGATGTCATACACCAGAAT+GGG | + | chr4_4:76129097-76129116 | None:intergenic | 35.0% | |
| !! | TGCTTAGGTAGCTTGTTAAA+TGG | - | chr4_4:76129214-76129233 | Msa0704040:intron | 35.0% |
| CTCCCGTAAACTATATAACT+CGG | - | chr4_4:76129248-76129267 | Msa0704040:intron | 35.0% | |
| TCCCGTAAACTATATAACTC+GGG | - | chr4_4:76129249-76129268 | Msa0704040:intron | 35.0% | |
| TCCCGAGTTATATAGTTTAC+GGG | + | chr4_4:76129253-76129272 | None:intergenic | 35.0% | |
| TAACTCGGGATATTTGTTTG+GGG | - | chr4_4:76129263-76129282 | Msa0704040:intron | 35.0% | |
| ATCATGCTATCATTTCCTCT+TGG | - | chr4_4:76129286-76129305 | Msa0704040:intron | 35.0% | |
| !! | GAATTGTGTCATTTACCAAG+AGG | + | chr4_4:76129304-76129323 | None:intergenic | 35.0% |
| ! | TTGGATTTGGTAAACAGGTA+TGG | - | chr4_4:76129549-76129568 | Msa0704040:intron | 35.0% |
| AATGAAGAGACAGTGATTTC+AGG | + | chr4_4:76129598-76129617 | None:intergenic | 35.0% | |
| TTATCCTCACTACATAAGCT+CGG | + | chr4_4:76129642-76129661 | None:intergenic | 35.0% | |
| TACTTGCCATATACTTCAAG+TGG | - | chr4_4:76129681-76129700 | Msa0704040:intron | 35.0% | |
| ! | CTTGGTTTCCTCTTCTTTTT+AGG | - | chr4_4:76129761-76129780 | Msa0704040:intron | 35.0% |
| !! | TCCTCTTCTTTTTAGGAACA+AGG | - | chr4_4:76129768-76129787 | Msa0704040:intron | 35.0% |
| TCCTTGTTCCTAAAAAGAAG+AGG | + | chr4_4:76129772-76129791 | None:intergenic | 35.0% | |
| ! | TTTCCACTCACATGTTCTTT+TGG | - | chr4_4:76129816-76129835 | Msa0704040:intron | 35.0% |
| TTCTTAAAGCTCAATGTGTC+TGG | - | chr4_4:76129930-76129949 | Msa0704040:intron | 35.0% | |
| CGAAACAATAAACAGATAGC+AGG | + | chr4_4:76129957-76129976 | None:intergenic | 35.0% | |
| !! | AGGTAAAGATAGAGGTGTTG+GGG | + | chr4_4:76125816-76125835 | None:intergenic | 40.0% |
| !!! | TTTCTTTTTCAGCTTGCCAG+TGG | - | chr4_4:76125919-76125938 | Msa0704040:three_prime_UTR | 40.0% |
| TTTCCTCTGATAAGCGAGAT+TGG | + | chr4_4:76126012-76126031 | None:intergenic | 40.0% | |
| ATCTCGCTTATCAGAGGAAA+AGG | - | chr4_4:76126012-76126031 | Msa0704040:three_prime_UTR | 40.0% | |
| CATTTGTCTGCTCAAAGCAA+AGG | - | chr4_4:76126163-76126182 | Msa0704040:three_prime_UTR | 40.0% | |
| ACAACCCAATATCAAATGGG+TGG | - | chr4_4:76126233-76126252 | Msa0704040:three_prime_UTR | 40.0% | |
| TATCTATCAGCAGAGAAGAG+AGG | + | chr4_4:76126595-76126614 | None:intergenic | 40.0% | |
| GTGTCAAAACGTTCATAAGG+AGG | + | chr4_4:76127035-76127054 | None:intergenic | 40.0% | |
| TCCGTGTCAAAACGTTCATA+AGG | + | chr4_4:76127038-76127057 | None:intergenic | 40.0% | |
| ! | ATTTTGCTAGCACTCCTCTA+TGG | + | chr4_4:76127231-76127250 | None:intergenic | 40.0% |
| TAGATCCCACATTAAGTGGT+GGG | + | chr4_4:76127313-76127332 | None:intergenic | 40.0% | |
| ATAGATCCCACATTAAGTGG+TGG | + | chr4_4:76127314-76127333 | None:intergenic | 40.0% | |
| GTGGGATCTATTACAAAGTG+TGG | - | chr4_4:76127323-76127342 | Msa0704040:intron | 40.0% | |
| GGGATCTATTACAAAGTGTG+GGG | - | chr4_4:76127325-76127344 | Msa0704040:intron | 40.0% | |
| GGAATAAATACCTAGAACCC+AGG | + | chr4_4:76127481-76127500 | None:intergenic | 40.0% | |
| ACCACTAATCGCTGAAAAAG+TGG | - | chr4_4:76127535-76127554 | Msa0704040:intron | 40.0% | |
| !!! | ACCACTTTTTCAGCGATTAG+TGG | + | chr4_4:76127539-76127558 | None:intergenic | 40.0% |
| TTGTTAAATAGCGGCTACAG+CGG | + | chr4_4:76127694-76127713 | None:intergenic | 40.0% | |
| AAAGAATAAACTCCGCTCCA+TGG | + | chr4_4:76127753-76127772 | None:intergenic | 40.0% | |
| ATTACACAACGGCTAACACA+AGG | + | chr4_4:76127922-76127941 | None:intergenic | 40.0% | |
| GTAGTGATACGATTTCGATC+AGG | - | chr4_4:76128106-76128125 | Msa0704040:intron | 40.0% | |
| TAGATCCCACATTAAGTGGT+GGG | + | chr4_4:76127313-76127332 | None:intergenic | 40.0% | |
| ATAGATCCCACATTAAGTGG+TGG | + | chr4_4:76127314-76127333 | None:intergenic | 40.0% | |
| GTGGGATCTATTACAAAGTG+TGG | - | chr4_4:76127323-76127342 | Msa0704040:intron | 40.0% | |
| GGGATCTATTACAAAGTGTG+GGG | - | chr4_4:76127325-76127344 | Msa0704040:intron | 40.0% | |
| GGAATAAATACCTAGAACCC+AGG | + | chr4_4:76127481-76127500 | None:intergenic | 40.0% | |
| ACCACTAATCGCTGAAAAAG+TGG | - | chr4_4:76127535-76127554 | Msa0704040:intron | 40.0% | |
| !!! | ACCACTTTTTCAGCGATTAG+TGG | + | chr4_4:76127539-76127558 | None:intergenic | 40.0% |
| TTGTTAAATAGCGGCTACAG+CGG | + | chr4_4:76127694-76127713 | None:intergenic | 40.0% | |
| ATTACACAACGGCTAACACA+AGG | + | chr4_4:76127922-76127941 | None:intergenic | 40.0% | |
| GTAGTGATACGATTTCGATC+AGG | - | chr4_4:76128106-76128125 | Msa0704040:intron | 40.0% | |
| !! | TGGGTTAGCACAACCAAATT+GGG | + | chr4_4:76129078-76129097 | None:intergenic | 40.0% |
| !! | ATGGGTTAGCACAACCAAAT+TGG | + | chr4_4:76129079-76129098 | None:intergenic | 40.0% |
| GATGATGTCATACACCAGAA+TGG | + | chr4_4:76129098-76129117 | None:intergenic | 40.0% | |
| GCTGCGTATAAATATCTCGA+AGG | + | chr4_4:76129135-76129154 | None:intergenic | 40.0% | |
| GACAGTGATTTCAGGACAAT+AGG | + | chr4_4:76129590-76129609 | None:intergenic | 40.0% | |
| TCATTTCTCTGTTGATCCAG+TGG | - | chr4_4:76129613-76129632 | Msa0704040:intron | 40.0% | |
| CATTTCTCTGTTGATCCAGT+GGG | - | chr4_4:76129614-76129633 | Msa0704040:intron | 40.0% | |
| ! | TGTCTGCCACTTGAAGTATA+TGG | + | chr4_4:76129690-76129709 | None:intergenic | 40.0% |
| ATGTGAGTGGAAATAGAAGC+AGG | + | chr4_4:76129809-76129828 | None:intergenic | 40.0% | |
| TAGCCAAAAGAACATGTGAG+TGG | + | chr4_4:76129822-76129841 | None:intergenic | 40.0% | |
| CATGCATGCGGTAACAAATG+AGG | + | chr4_4:76125869-76125888 | None:intergenic | 45.0% | |
| CTCAAATCAGTGCATGCATG+CGG | + | chr4_4:76125881-76125900 | None:intergenic | 45.0% | |
| ! | TTTTCAGCTTGCCAGTGGAA+TGG | - | chr4_4:76125924-76125943 | Msa0704040:three_prime_UTR | 45.0% |
| TTTCAGCTTGCCAGTGGAAT+GGG | - | chr4_4:76125925-76125944 | Msa0704040:three_prime_UTR | 45.0% | |
| GATAAGCGAGATTGGAGCTT+TGG | + | chr4_4:76126004-76126023 | None:intergenic | 45.0% | |
| ACTCACACGTACCAATCACT+TGG | - | chr4_4:76126696-76126715 | Msa0704040:three_prime_UTR | 45.0% | |
| CTCACACGTACCAATCACTT+GGG | - | chr4_4:76126697-76126716 | Msa0704040:three_prime_UTR | 45.0% | |
| CTCTCATGTTCCCAAGTGAT+TGG | + | chr4_4:76126710-76126729 | None:intergenic | 45.0% | |
| ACAGCATGAGTATAGTGGTC+AGG | + | chr4_4:76126852-76126871 | None:intergenic | 45.0% | |
| ! | GAGAGTCGGTGTTTACATGT+TGG | + | chr4_4:76126979-76126998 | None:intergenic | 45.0% |
| TGGATCCCACCACTTAATGT+GGG | - | chr4_4:76127305-76127324 | Msa0704040:intron | 45.0% | |
| GCTTCTTTGGCCATAACCTA+GGG | - | chr4_4:76127402-76127421 | Msa0704040:intron | 45.0% | |
| CTTCTTTGGCCATAACCTAG+GGG | - | chr4_4:76127403-76127422 | Msa0704040:intron | 45.0% | |
| GGTATAATGCTACAGTCCAC+TGG | + | chr4_4:76127670-76127689 | None:intergenic | 45.0% | |
| ATCTCTGGCAACAGTGATGT+TGG | - | chr4_4:76127825-76127844 | Msa0704040:intron | 45.0% | |
| ATCAGGTGATCCCAATCTCA+TGG | - | chr4_4:76128123-76128142 | Msa0704040:intron | 45.0% | |
| TGGATCCCACCACTTAATGT+GGG | - | chr4_4:76127305-76127324 | Msa0704040:intron | 45.0% | |
| GCTTCTTTGGCCATAACCTA+GGG | - | chr4_4:76127402-76127421 | Msa0704040:intron | 45.0% | |
| CTTCTTTGGCCATAACCTAG+GGG | - | chr4_4:76127403-76127422 | Msa0704040:intron | 45.0% | |
| GGTATAATGCTACAGTCCAC+TGG | + | chr4_4:76127670-76127689 | None:intergenic | 45.0% | |
| ATCTCTGGCAACAGTGATGT+TGG | - | chr4_4:76127825-76127844 | Msa0704040:intron | 45.0% | |
| ATCAGGTGATCCCAATCTCA+CGG | - | chr4_4:76128123-76128142 | Msa0704040:intron | 45.0% | |
| GTTAGCACAACCAAATTGGG+AGG | + | chr4_4:76129075-76129094 | None:intergenic | 45.0% | |
| TTGGTTGTGCTAACCCATTC+TGG | - | chr4_4:76129081-76129100 | Msa0704040:intron | 45.0% | |
| GACATCATCTTCTGCAGTTG+AGG | - | chr4_4:76129109-76129128 | Msa0704040:intron | 45.0% | |
| GTGATTTCAGGACAATAGGC+TGG | + | chr4_4:76129586-76129605 | None:intergenic | 45.0% | |
| GTAGAAAAGCTGCGAGCATT+TGG | + | chr4_4:76129730-76129749 | None:intergenic | 45.0% | |
| !! | AAAATAAAATTATATTGAAA+AGG | + | chr4_4:76130059-76130078 | None:intergenic | 5.0% |
| !!! | TTTTCAATATAATTTTATTT+TGG | - | chr4_4:76130058-76130077 | Msa0704040:CDS | 5.0% |
| GTGTTGGGGTGAATTGACGA+GGG | + | chr4_4:76125802-76125821 | None:intergenic | 50.0% | |
| GCTCCAATCTCGCTTATCAG+AGG | - | chr4_4:76126006-76126025 | Msa0704040:three_prime_UTR | 50.0% | |
| ! | TCTAGCTTATGTGCTCCTGC+AGG | - | chr4_4:76126807-76126826 | Msa0704040:CDS | 50.0% |
| CTAGCTTATGTGCTCCTGCA+GGG | - | chr4_4:76126808-76126827 | Msa0704040:CDS | 50.0% | |
| GTGGATCCCACCACTTAATG+TGG | - | chr4_4:76127304-76127323 | Msa0704040:intron | 50.0% | |
| ACGTTGCTAGCACGCTTCTT+TGG | - | chr4_4:76127389-76127408 | Msa0704040:intron | 50.0% | |
| CGCTTCTTTGGCCATAACCT+AGG | - | chr4_4:76127401-76127420 | Msa0704040:intron | 50.0% | |
| AATCTGCTGCCCCTAGGTTA+TGG | + | chr4_4:76127415-76127434 | None:intergenic | 50.0% | |
| ACGTAAAATCTGCTGCCCCT+AGG | + | chr4_4:76127421-76127440 | None:intergenic | 50.0% | |
| CATAGTTGCTCCTGGGTTCT+AGG | - | chr4_4:76127468-76127487 | Msa0704040:intron | 50.0% | |
| AGCAGCTATAGTGGCGCAAT+AGG | + | chr4_4:76127589-76127608 | None:intergenic | 50.0% | |
| TTAAATAGCGGCTACAGCGG+TGG | + | chr4_4:76127691-76127710 | None:intergenic | 50.0% | |
| !! | TGAGGGTACCTTAGGTAACC+AGG | - | chr4_4:76127786-76127805 | Msa0704040:intron | 50.0% |
| ATGTTCCGCCTGGTTACCTA+AGG | + | chr4_4:76127797-76127816 | None:intergenic | 50.0% | |
| GTGGATCCCACCACTTAATG+TGG | - | chr4_4:76127304-76127323 | Msa0704040:intron | 50.0% | |
| ACGTTGCTAGCACGCTTCTT+TGG | - | chr4_4:76127389-76127408 | Msa0704040:intron | 50.0% | |
| CGCTTCTTTGGCCATAACCT+AGG | - | chr4_4:76127401-76127420 | Msa0704040:intron | 50.0% | |
| AATCTGCTGCCCCTAGGTTA+TGG | + | chr4_4:76127415-76127434 | None:intergenic | 50.0% | |
| ACGTAAAATCTGCTGCCCCT+AGG | + | chr4_4:76127421-76127440 | None:intergenic | 50.0% | |
| CATAGTTGCTCCTGGGTTCT+AGG | - | chr4_4:76127468-76127487 | Msa0704040:intron | 50.0% | |
| AGCAGCTATAGTGGCGCAAT+AGG | + | chr4_4:76127589-76127608 | None:intergenic | 50.0% | |
| TTAAATAGCGGCTACAGCGG+TGG | + | chr4_4:76127691-76127710 | None:intergenic | 50.0% | |
| !! | TGAGGGTACCTTAGGTAACC+AGG | - | chr4_4:76127786-76127805 | Msa0704040:intron | 50.0% |
| ATGTTCCGCCTGGTTACCTA+AGG | + | chr4_4:76127797-76127816 | None:intergenic | 50.0% | |
| TACATAAGCTCGGTTCCCAC+TGG | + | chr4_4:76129632-76129651 | None:intergenic | 50.0% | |
| GGAACCGAGCTTATGTAGTG+AGG | - | chr4_4:76129635-76129654 | Msa0704040:intron | 50.0% | |
| ! | GGTGTTGGGGTGAATTGACG+AGG | + | chr4_4:76125803-76125822 | None:intergenic | 55.0% |
| GGCTCTTGAACCCATTCCAC+TGG | + | chr4_4:76125938-76125957 | None:intergenic | 55.0% | |
| GGGTACCTTAGGTAACCAGG+CGG | - | chr4_4:76127789-76127808 | Msa0704040:intron | 55.0% | |
| TAACCAGGCGGAACATGCAC+TGG | - | chr4_4:76127801-76127820 | Msa0704040:intron | 55.0% | |
| ! | GGAACATGCACTGGCATCTC+TGG | - | chr4_4:76127810-76127829 | Msa0704040:intron | 55.0% |
| GGGTACCTTAGGTAACCAGG+CGG | - | chr4_4:76127789-76127808 | Msa0704040:intron | 55.0% | |
| TAACCAGGCGGAACATGCAC+TGG | - | chr4_4:76127801-76127820 | Msa0704040:intron | 55.0% | |
| ! | GGAACATGCACTGGCATCTC+TGG | - | chr4_4:76127810-76127829 | Msa0704040:intron | 55.0% |
| TGAGCAGAAACACGCCCTGC+AGG | + | chr4_4:76126825-76126844 | None:intergenic | 60.0% | |
| TGTCGCCAGGAGTTCAGCCA+TGG | - | chr4_4:76127733-76127752 | Msa0704040:intron | 60.0% | |
| CCAGGAGTTCAGCCATGGAG+CGG | - | chr4_4:76127738-76127757 | Msa0704040:intron | 60.0% | |
| ATGCCAGTGCATGTTCCGCC+TGG | + | chr4_4:76127807-76127826 | None:intergenic | 60.0% | |
| TGTCGCCAGGAGTTCAGCCA+TGG | - | chr4_4:76127733-76127752 | Msa0704040:intron | 60.0% | |
| CCACTCCATGGCTGAACTCC+TGG | + | chr4_4:76128648-76128667 | None:intergenic | 60.0% | |
| CCAGGAGTTCAGCCATGGAG+TGG | - | chr4_4:76127738-76127757 | Msa0704040:intron | 60.0% | |
| ATGCCAGTGCATGTTCCGCC+TGG | + | chr4_4:76127807-76127826 | None:intergenic | 60.0% | |
| CCGCTCCATGGCTGAACTCC+TGG | + | chr4_4:76127741-76127760 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 76125703 | 76130157 | 76125703 | ID=Msa0704040;Name=Msa0704040 |
| chr4_4 | mRNA | 76125703 | 76130157 | 76125703 | ID=Msa0704040-mRNA-1;Parent=Msa0704040;Name=Msa0704040-mRNA-1;_AED=0.14;_eAED=0.14;_QI=52|0.66|0.71|1|0.66|0.71|7|698|195 |
| chr4_4 | exon | 76125703 | 76126294 | 76125703 | ID=Msa0704040-mRNA-1:exon:24033;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76126691 | 76126888 | 76126691 | ID=Msa0704040-mRNA-1:exon:24032;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76127073 | 76127145 | 76127073 | ID=Msa0704040-mRNA-1:exon:24031;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76128713 | 76128781 | 76128713 | ID=Msa0704040-mRNA-1:exon:24030;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76128892 | 76129048 | 76128892 | ID=Msa0704040-mRNA-1:exon:24029;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76129827 | 76129929 | 76129827 | ID=Msa0704040-mRNA-1:exon:24028;Parent=Msa0704040-mRNA-1 |
| chr4_4 | exon | 76130012 | 76130157 | 76130012 | ID=Msa0704040-mRNA-1:exon:24027;Parent=Msa0704040-mRNA-1 |
| chr4_4 | five_prime_UTR | 76130106 | 76130157 | 76130106 | ID=Msa0704040-mRNA-1:five_prime_utr;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76130012 | 76130105 | 76130012 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76129827 | 76129929 | 76129827 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76128892 | 76129048 | 76128892 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76128713 | 76128781 | 76128713 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76127073 | 76127145 | 76127073 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | CDS | 76126797 | 76126888 | 76126797 | ID=Msa0704040-mRNA-1:cds;Parent=Msa0704040-mRNA-1 |
| chr4_4 | three_prime_UTR | 76126691 | 76126796 | 76126691 | ID=Msa0704040-mRNA-1:three_prime_utr;Parent=Msa0704040-mRNA-1 |
| chr4_4 | three_prime_UTR | 76125703 | 76126294 | 76125703 | ID=Msa0704040-mRNA-1:three_prime_utr;Parent=Msa0704040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
