Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567700 | XP_013447005.1 | 85.556 | 180 | 14 | 2 | 9 | 176 | 118 | 297 | 1.24e-102 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567700 | A0A072TUC9 | 85.556 | 180 | 14 | 2 | 9 | 176 | 118 | 297 | 5.93e-103 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224980 | Msa0567700 | 0.801222 | 9.966953e-49 | -8.615850e-47 |
| Msa0225030 | Msa0567700 | 0.806351 | 8.581519e-50 | -8.615850e-47 |
| Msa0365350 | Msa0567700 | 0.814308 | 1.646324e-51 | -8.615850e-47 |
| Msa0249670 | Msa0567700 | 0.806955 | 6.397100e-50 | -8.615850e-47 |
| Msa0504640 | Msa0567700 | 0.801418 | 9.088575e-49 | -8.615850e-47 |
| Msa0508770 | Msa0567700 | 0.817806 | 2.724124e-52 | -8.615850e-47 |
| Msa0565930 | Msa0567700 | 0.817050 | 4.032312e-52 | -8.615850e-47 |
| Msa0567420 | Msa0567700 | 0.801547 | 8.553947e-49 | -8.615850e-47 |
| Msa0567680 | Msa0567700 | 0.996183 | 2.186083e-224 | -8.615850e-47 |
| Msa0567700 | Msa0567720 | 0.870099 | 1.884246e-66 | -8.615850e-47 |
| Msa0567700 | Msa0567970 | 0.881256 | 2.791599e-70 | -8.615850e-47 |
| Msa0567700 | Msa0568810 | 0.829354 | 5.395167e-55 | -8.615850e-47 |
| Msa0567700 | Msa0569540 | 0.804677 | 1.925704e-49 | -8.615850e-47 |
| Msa0567700 | Msa0598680 | 0.826481 | 2.648954e-54 | -8.615850e-47 |
| Msa0567700 | Msa0704000 | 0.843409 | 1.426505e-58 | -8.615850e-47 |
| Msa0567700 | Msa0704040 | 0.818121 | 2.312473e-52 | -8.615850e-47 |
| Msa0567700 | Msa0761930 | 0.801932 | 7.131091e-49 | -8.615850e-47 |
| Msa0567700 | Msa0880370 | 0.816923 | 4.305232e-52 | -8.615850e-47 |
| Msa0567700 | Msa0978440 | 0.821801 | 3.328278e-53 | -8.615850e-47 |
| Msa0567700 | Msa1040030 | 0.807267 | 5.494816e-50 | -8.615850e-47 |
| Msa0567700 | Msa1112230 | 0.805054 | 1.606281e-49 | -8.615850e-47 |
| Msa0567700 | Msa1158540 | 0.805173 | 1.516793e-49 | -8.615850e-47 |
| Msa0567700 | Msa1223600 | 0.815219 | 1.033878e-51 | -8.615850e-47 |
| Msa0567700 | Msa1229880 | 0.841801 | 3.813053e-58 | -8.615850e-47 |
| Msa0567700 | Msa1252220 | 0.803045 | 4.204838e-49 | -8.615850e-47 |
| Msa0567700 | Msa1267800 | 0.818112 | 2.322767e-52 | -8.615850e-47 |
| Msa0567700 | Msa1269370 | 0.800508 | 1.394867e-48 | -8.615850e-47 |
| Msa0567700 | Msa1310620 | 0.835703 | 1.437906e-56 | -8.615850e-47 |
| Msa0567700 | Msa1368800 | 0.823477 | 1.356458e-53 | -8.615850e-47 |
| Msa0567700 | Msa1374610 | 0.805646 | 1.207006e-49 | -8.615850e-47 |
| Msa0567700 | Msa1449510 | 0.807619 | 4.626142e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567700 | MtrunA17_Chr8g0386421 | 85.556 | 180 | 14 | 2 | 9 | 176 | 118 | 297 | 1.14e-106 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567700 | AT2G32500.2 | 51.667 | 180 | 75 | 2 | 9 | 176 | 97 | 276 | 5.06e-59 | 186 |
| Msa0567700 | AT2G32500.1 | 52.137 | 117 | 53 | 1 | 9 | 122 | 97 | 213 | 6.15e-36 | 125 |
Find 46 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATCTGTTTATTGTTTC+GGG | 0.115077 | 4_1:-69026050 | Msa0567700:three_prime_UTR |
| CTGCTATCTGTTTATTGTTT+CGG | 0.203560 | 4_1:-69026051 | Msa0567700:three_prime_UTR |
| TTTCCACTCACATGTTCTTT+TGG | 0.254274 | 4_1:-69026190 | Msa0567700:three_prime_UTR |
| CTTGAGAACCTTCAAGTAAA+AGG | 0.266883 | 4_1:+69028173 | None:intergenic |
| AATGAAGAGATAGTGATTTC+AGG | 0.286116 | 4_1:+69026411 | None:intergenic |
| GGAACATGCACTGGCATCTC+TGG | 0.334936 | 4_1:-69027290 | Msa0567700:CDS |
| TCAGATATAAACCGTGAGAT+TGG | 0.359114 | 4_1:+69026966 | None:intergenic |
| GAATTTCAACGAAAGTTCTA+AGG | 0.371566 | 4_1:-69027031 | Msa0567700:CDS |
| GATAGTGATTTCAGGACAAT+AGG | 0.387522 | 4_1:+69026419 | None:intergenic |
| TTCTTAAAGCTCAATGTGTC+TGG | 0.392150 | 4_1:-69026076 | Msa0567700:three_prime_UTR |
| TCTAGCTTATGTGCTCCTGC+AGG | 0.440665 | 4_1:-69028288 | Msa0567700:CDS |
| TCATTTAATGAGGGTACCTT+AGG | 0.442429 | 4_1:-69027322 | Msa0567700:CDS |
| ATATTAAAAGTGTACCTTGA+AGG | 0.446290 | 4_1:+69025998 | None:intergenic |
| CATTTCTCTGTTGATCCAGT+GGG | 0.450126 | 4_1:-69026392 | Msa0567700:CDS |
| CAGATATAAACCGTGAGATT+GGG | 0.460477 | 4_1:+69026967 | None:intergenic |
| TCATTTCTCTGTTGATCCAG+TGG | 0.484155 | 4_1:-69026393 | Msa0567700:CDS |
| TGTAAACAGCATAAGTATAG+TGG | 0.484493 | 4_1:+69028241 | None:intergenic |
| TTGTGTAAATTGTACTATCA+AGG | 0.504240 | 4_1:+69027243 | None:intergenic |
| GCAATTGAGTTTCAGAATGT+TGG | 0.505112 | 4_1:+69026138 | None:intergenic |
| ATGTCAAAATCAAACCTTCA+AGG | 0.507168 | 4_1:-69026012 | Msa0567700:three_prime_UTR |
| ACAGCATAAGTATAGTGGTC+AGG | 0.508647 | 4_1:+69028246 | None:intergenic |
| TGAGCAGAAACACGCCCTGC+AGG | 0.514909 | 4_1:+69028273 | None:intergenic |
| TACATAAGCTCGGTTCCCAC+TGG | 0.518561 | 4_1:+69026377 | None:intergenic |
| TAACCAGGCGGAACATGCAC+TGG | 0.530562 | 4_1:-69027299 | Msa0567700:CDS |
| GTGATTTCAGGACAATAGGC+TGG | 0.532975 | 4_1:+69026423 | None:intergenic |
| ATGCCAGTGCATGTTCCGCC+TGG | 0.536544 | 4_1:+69027296 | None:intergenic |
| ATGTGAGTGGAAATAGAAGC+AGG | 0.552159 | 4_1:+69026200 | None:intergenic |
| AGTTCTAAGGAGTATACTCA+TGG | 0.556075 | 4_1:-69027018 | Msa0567700:CDS |
| ATCTCTGGCAACAGTGATGT+TGG | 0.558570 | 4_1:-69027275 | Msa0567700:CDS |
| CTAGCTTATGTGCTCCTGCA+GGG | 0.560601 | 4_1:-69028287 | Msa0567700:CDS |
| GTAGTGATACGATTTCGATC+AGG | 0.566672 | 4_1:-69026994 | Msa0567700:CDS |
| CGAAACAATAAACAGATAGC+AGG | 0.568699 | 4_1:+69026052 | None:intergenic |
| GTTTCAGGGATTAATTAATG+TGG | 0.569081 | 4_1:-69028023 | Msa0567700:intron |
| ATGTTCCGCCTGGTTACCTA+AGG | 0.573483 | 4_1:+69027306 | None:intergenic |
| ATCAGGTGATCCCAATCTCA+CGG | 0.579743 | 4_1:-69026977 | Msa0567700:intron |
| ATGATTTATATATTTCGCAA+AGG | 0.580470 | 4_1:-69027974 | Msa0567700:CDS |
| TGAGGGTACCTTAGGTAACC+AGG | 0.595164 | 4_1:-69027314 | Msa0567700:CDS |
| GTAAATTGTACTATCAAGGA+AGG | 0.603275 | 4_1:+69027247 | None:intergenic |
| ATACTTATGCTGTTTACATG+CGG | 0.603282 | 4_1:-69028236 | Msa0567700:CDS |
| TTATCCTCACTACATAAGCT+CGG | 0.606028 | 4_1:+69026367 | None:intergenic |
| TTCTGAAACTCAATTGCCAT+AGG | 0.613416 | 4_1:-69026132 | Msa0567700:three_prime_UTR |
| TTATATATTTCGCAAAGGAG+AGG | 0.620757 | 4_1:-69027969 | Msa0567700:intron |
| TAGCCAAAAGAACATGTGAG+TGG | 0.632547 | 4_1:+69026187 | None:intergenic |
| GGAACCGAGCTTATGTAGTG+AGG | 0.674016 | 4_1:-69026371 | Msa0567700:exon |
| TTGATAGTACAATTTACACA+AGG | 0.690159 | 4_1:-69027241 | Msa0567700:intron |
| GGGTACCTTAGGTAACCAGG+CGG | 0.811298 | 4_1:-69027311 | Msa0567700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCAGTTTTTTTTTTTTA+AGG | + | chr4_1:69027746-69027765 | None:intergenic | 10.0% |
| !! | AATATAAACTAAACTATATT+TGG | - | chr4_1:69027809-69027828 | Msa0567700:intron | 10.0% |
| !!! | ATTTCAGTTTTTTTTTTTTA+AGG | + | chr4_1:69027746-69027765 | None:intergenic | 10.0% |
| !! | AATATAAACTAAACTATATT+TGG | - | chr4_1:69027809-69027828 | Msa0567700:intron | 10.0% |
| !! | TTTCTCATTAAATGAAATTA+AGG | + | chr4_1:69026545-69026564 | None:intergenic | 15.0% |
| !! | GTTATTAATATTTAATTGTC+AGG | - | chr4_1:69027228-69027247 | Msa0567700:intron | 15.0% |
| !!! | TAAAACATTATTTTATGCTT+AGG | - | chr4_1:69027476-69027495 | Msa0567700:intron | 15.0% |
| !! | AAAAATTTCTCAAGTAAAAA+TGG | + | chr4_1:69027624-69027643 | None:intergenic | 15.0% |
| !! | TTTCTCATTAAATGAAATTA+AGG | + | chr4_1:69026545-69026564 | None:intergenic | 15.0% |
| !! | GTTATTAATATTTAATTGTC+AGG | - | chr4_1:69027228-69027247 | Msa0567700:intron | 15.0% |
| !!! | TAAAACATTATTTTATGCTT+AGG | - | chr4_1:69027476-69027495 | Msa0567700:intron | 15.0% |
| !! | AAAAATTTCTCAAGTAAAAA+TGG | + | chr4_1:69027624-69027643 | None:intergenic | 15.0% |
| !! | TAAGAGTAACAGAAAAATAA+AGG | + | chr4_1:69026196-69026215 | None:intergenic | 20.0% |
| !! | ATGATTTATATATTTCGCAA+AGG | - | chr4_1:69026311-69026330 | Msa0567700:intron | 20.0% |
| !!! | TCTTTTGATATCATTTAATG+AGG | - | chr4_1:69026953-69026972 | Msa0567700:intron | 20.0% |
| !!! | CTTTTGATATCATTTAATGA+GGG | - | chr4_1:69026954-69026973 | Msa0567700:intron | 20.0% |
| !! | TAAAAGATCTAATTACACAA+CGG | + | chr4_1:69027118-69027137 | None:intergenic | 20.0% |
| !!! | TGTAATTAGATCTTTTAACA+TGG | - | chr4_1:69027121-69027140 | Msa0567700:intron | 20.0% |
| !! | TGTAAAATGTATTTATCTAC+AGG | + | chr4_1:69027706-69027725 | None:intergenic | 20.0% |
| !! | AACTAAACTATATTTGGATT+TGG | - | chr4_1:69027815-69027834 | Msa0567700:intron | 20.0% |
| !! | TAAGAGTAACAGAAAAATAA+AGG | + | chr4_1:69026196-69026215 | None:intergenic | 20.0% |
| !! | ATGATTTATATATTTCGCAA+AGG | - | chr4_1:69026311-69026330 | Msa0567700:intron | 20.0% |
| !!! | TCTTTTGATATCATTTAATG+AGG | - | chr4_1:69026953-69026972 | Msa0567700:intron | 20.0% |
| !!! | CTTTTGATATCATTTAATGA+GGG | - | chr4_1:69026954-69026973 | Msa0567700:intron | 20.0% |
| !! | TAAAAGATCTAATTACACAA+CGG | + | chr4_1:69027118-69027137 | None:intergenic | 20.0% |
| !!! | TGTAATTAGATCTTTTAACA+TGG | - | chr4_1:69027121-69027140 | Msa0567700:intron | 20.0% |
| !! | TGTAAAATGTATTTATCTAC+AGG | + | chr4_1:69027706-69027725 | None:intergenic | 20.0% |
| !! | AACTAAACTATATTTGGATT+TGG | - | chr4_1:69027815-69027834 | Msa0567700:intron | 20.0% |
| !! | AGTTTTCATAGAACTTTTCA+AGG | + | chr4_1:69026092-69026111 | None:intergenic | 25.0% |
| ! | AAAATAAAGGAAAAGAGAGT+CGG | + | chr4_1:69026183-69026202 | None:intergenic | 25.0% |
| ! | CTCATTAAATGAAATTAAGG+TGG | + | chr4_1:69026542-69026561 | None:intergenic | 25.0% |
| !! | AAAGTAGTGTTGTTAAATAG+CGG | + | chr4_1:69026897-69026916 | None:intergenic | 25.0% |
| ! | TTGTGTAAATTGTACTATCA+AGG | + | chr4_1:69027045-69027064 | None:intergenic | 25.0% |
| !! | TTGATAGTACAATTTACACA+AGG | - | chr4_1:69027044-69027063 | Msa0567700:intron | 25.0% |
| ! | AGTAGAAAATCAAAACATAC+TGG | + | chr4_1:69027205-69027224 | None:intergenic | 25.0% |
| ! | TCCTTACATCTTTATATTCT+TGG | + | chr4_1:69027434-69027453 | None:intergenic | 25.0% |
| ! | ATCCTGAGTTATATAGTTTA+CGG | + | chr4_1:69027531-69027550 | None:intergenic | 25.0% |
| ! | TATAACTCAGGATATTTGTT+TGG | - | chr4_1:69027538-69027557 | Msa0567700:intron | 25.0% |
| ! | ATAACTCAGGATATTTGTTT+GGG | - | chr4_1:69027539-69027558 | Msa0567700:intron | 25.0% |
| !! | TATATTTGGATTTGGTAAAC+AGG | - | chr4_1:69027823-69027842 | Msa0567700:intron | 25.0% |
| !! | ATATTAAAAGTGTACCTTGA+AGG | + | chr4_1:69028290-69028309 | None:intergenic | 25.0% |
| !! | AGTTTTCATAGAACTTTTCA+AGG | + | chr4_1:69026092-69026111 | None:intergenic | 25.0% |
| ! | AAAATAAAGGAAAAGAGAGT+CGG | + | chr4_1:69026183-69026202 | None:intergenic | 25.0% |
| ! | CTCATTAAATGAAATTAAGG+TGG | + | chr4_1:69026542-69026561 | None:intergenic | 25.0% |
| !! | AAAGTAGTGTTGTTAAATAG+CGG | + | chr4_1:69026897-69026916 | None:intergenic | 25.0% |
| ! | TTGTGTAAATTGTACTATCA+AGG | + | chr4_1:69027045-69027064 | None:intergenic | 25.0% |
| !! | TTGATAGTACAATTTACACA+AGG | - | chr4_1:69027044-69027063 | Msa0567700:intron | 25.0% |
| ! | AGTAGAAAATCAAAACATAC+TGG | + | chr4_1:69027205-69027224 | None:intergenic | 25.0% |
| ! | TCCTTACATCTTTATATTCT+TGG | + | chr4_1:69027434-69027453 | None:intergenic | 25.0% |
| ! | ATCCTGAGTTATATAGTTTA+CGG | + | chr4_1:69027531-69027550 | None:intergenic | 25.0% |
| ! | TATAACTCAGGATATTTGTT+TGG | - | chr4_1:69027538-69027557 | Msa0567700:intron | 25.0% |
| ! | ATAACTCAGGATATTTGTTT+GGG | - | chr4_1:69027539-69027558 | Msa0567700:intron | 25.0% |
| !! | TATATTTGGATTTGGTAAAC+AGG | - | chr4_1:69027823-69027842 | Msa0567700:intron | 25.0% |
| !! | ATATTAAAAGTGTACCTTGA+AGG | + | chr4_1:69028290-69028309 | None:intergenic | 25.0% |
| TGTAAACAGCATAAGTATAG+TGG | + | chr4_1:69026047-69026066 | None:intergenic | 30.0% | |
| ! | ATACTTATGCTGTTTACATG+CGG | - | chr4_1:69026049-69026068 | Msa0567700:three_prime_UTR | 30.0% |
| ! | TGAAAACTCCTTTTACTTGA+AGG | - | chr4_1:69026104-69026123 | Msa0567700:three_prime_UTR | 30.0% |
| !!! | ACCTTTACTGATTTTGTTTC+AGG | - | chr4_1:69026247-69026266 | Msa0567700:intron | 30.0% |
| !!! | CCTTTACTGATTTTGTTTCA+GGG | - | chr4_1:69026248-69026267 | Msa0567700:intron | 30.0% |
| GTTTCAGGGATTAATTAATG+TGG | - | chr4_1:69026262-69026281 | Msa0567700:intron | 30.0% | |
| TTATATATTTCGCAAAGGAG+AGG | - | chr4_1:69026316-69026335 | Msa0567700:intron | 30.0% | |
| !! | CTGATTTACTTTTCCTCTTA+TGG | - | chr4_1:69026345-69026364 | Msa0567700:intron | 30.0% |
| TCAATTTATCGATCCATAAG+AGG | + | chr4_1:69026361-69026380 | None:intergenic | 30.0% | |
| CAATTCATATTTGACCATAG+AGG | - | chr4_1:69026404-69026423 | Msa0567700:CDS | 30.0% | |
| TTCCTATATACTTCAGTCTT+AGG | - | chr4_1:69026691-69026710 | Msa0567700:intron | 30.0% | |
| ATCCTAAGACTGAAGTATAT+AGG | + | chr4_1:69026696-69026715 | None:intergenic | 30.0% | |
| ! | TTTAAATGAATTTTGTCGCC+AGG | - | chr4_1:69026914-69026933 | Msa0567700:intron | 30.0% |
| GTAAATTGTACTATCAAGGA+AGG | + | chr4_1:69027041-69027060 | None:intergenic | 30.0% | |
| AACATCTGAATAAATGTTGG+TGG | + | chr4_1:69027083-69027102 | None:intergenic | 30.0% | |
| !! | GATCTTTTAACATGGTTTGT+TGG | - | chr4_1:69027129-69027148 | Msa0567700:intron | 30.0% |
| !!! | AACAGTTCATTGTTTTGACA+AGG | - | chr4_1:69027158-69027177 | Msa0567700:intron | 30.0% |
| GAATTTCAACGAAAGTTCTA+AGG | - | chr4_1:69027254-69027273 | Msa0567700:CDS | 30.0% | |
| !!! | GATTTTTTTTCCTCCCAATT+TGG | - | chr4_1:69027340-69027359 | Msa0567700:CDS | 30.0% |
| GCCAAGAATATAAAGATGTA+AGG | - | chr4_1:69027430-69027449 | Msa0567700:intron | 30.0% | |
| TCCTGAGTTATATAGTTTAC+GGG | + | chr4_1:69027530-69027549 | None:intergenic | 30.0% | |
| TAACTCAGGATATTTGTTTG+GGG | - | chr4_1:69027540-69027559 | Msa0567700:intron | 30.0% | |
| AATGAAGAGATAGTGATTTC+AGG | + | chr4_1:69027877-69027896 | None:intergenic | 30.0% | |
| TTTCTACTTGAAATGTGACT+TGG | - | chr4_1:69028022-69028041 | Msa0567700:intron | 30.0% | |
| !! | TTTTAGGAACAAGGAACATA+TGG | - | chr4_1:69028056-69028075 | Msa0567700:intron | 30.0% |
| AAGCAACAAAAACTTTCCTA+TGG | + | chr4_1:69028172-69028191 | None:intergenic | 30.0% | |
| CTGCTATCTGTTTATTGTTT+CGG | - | chr4_1:69028234-69028253 | Msa0567700:CDS | 30.0% | |
| TGCTATCTGTTTATTGTTTC+GGG | - | chr4_1:69028235-69028254 | Msa0567700:CDS | 30.0% | |
| ATGTCAAAATCAAACCTTCA+AGG | - | chr4_1:69028273-69028292 | Msa0567700:CDS | 30.0% | |
| TGTAAACAGCATAAGTATAG+TGG | + | chr4_1:69026047-69026066 | None:intergenic | 30.0% | |
| ! | ATACTTATGCTGTTTACATG+CGG | - | chr4_1:69026049-69026068 | Msa0567700:three_prime_UTR | 30.0% |
| ! | TGAAAACTCCTTTTACTTGA+AGG | - | chr4_1:69026104-69026123 | Msa0567700:three_prime_UTR | 30.0% |
| !!! | ACCTTTACTGATTTTGTTTC+AGG | - | chr4_1:69026247-69026266 | Msa0567700:intron | 30.0% |
| !!! | CCTTTACTGATTTTGTTTCA+GGG | - | chr4_1:69026248-69026267 | Msa0567700:intron | 30.0% |
| GTTTCAGGGATTAATTAATG+TGG | - | chr4_1:69026262-69026281 | Msa0567700:intron | 30.0% | |
| TTATATATTTCGCAAAGGAG+AGG | - | chr4_1:69026316-69026335 | Msa0567700:intron | 30.0% | |
| !! | CTGATTTACTTTTCCTCTTA+TGG | - | chr4_1:69026345-69026364 | Msa0567700:intron | 30.0% |
| TCAATTTATCGATCCATAAG+AGG | + | chr4_1:69026361-69026380 | None:intergenic | 30.0% | |
| CAATTCATATTTGACCATAG+AGG | - | chr4_1:69026404-69026423 | Msa0567700:CDS | 30.0% | |
| TTCCTATATACTTCAGTCTT+AGG | - | chr4_1:69026691-69026710 | Msa0567700:intron | 30.0% | |
| ATCCTAAGACTGAAGTATAT+AGG | + | chr4_1:69026696-69026715 | None:intergenic | 30.0% | |
| ! | TTTAAATGAATTTTGTCGCC+AGG | - | chr4_1:69026914-69026933 | Msa0567700:intron | 30.0% |
| GTAAATTGTACTATCAAGGA+AGG | + | chr4_1:69027041-69027060 | None:intergenic | 30.0% | |
| AACATCTGAATAAATGTTGG+TGG | + | chr4_1:69027083-69027102 | None:intergenic | 30.0% | |
| !! | GATCTTTTAACATGGTTTGT+TGG | - | chr4_1:69027129-69027148 | Msa0567700:intron | 30.0% |
| !!! | AACAGTTCATTGTTTTGACA+AGG | - | chr4_1:69027158-69027177 | Msa0567700:intron | 30.0% |
| GAATTTCAACGAAAGTTCTA+AGG | - | chr4_1:69027254-69027273 | Msa0567700:CDS | 30.0% | |
| !!! | GATTTTTTTTCCTCCCAATT+TGG | - | chr4_1:69027340-69027359 | Msa0567700:CDS | 30.0% |
| GCCAAGAATATAAAGATGTA+AGG | - | chr4_1:69027430-69027449 | Msa0567700:intron | 30.0% | |
| TCCTGAGTTATATAGTTTAC+GGG | + | chr4_1:69027530-69027549 | None:intergenic | 30.0% | |
| TAACTCAGGATATTTGTTTG+GGG | - | chr4_1:69027540-69027559 | Msa0567700:intron | 30.0% | |
| AATGAAGAGATAGTGATTTC+AGG | + | chr4_1:69027877-69027896 | None:intergenic | 30.0% | |
| TTTCTACTTGAAATGTGACT+TGG | - | chr4_1:69028022-69028041 | Msa0567700:intron | 30.0% | |
| !! | TTTTAGGAACAAGGAACATA+TGG | - | chr4_1:69028056-69028075 | Msa0567700:intron | 30.0% |
| AAGCAACAAAAACTTTCCTA+TGG | + | chr4_1:69028172-69028191 | None:intergenic | 30.0% | |
| CTGCTATCTGTTTATTGTTT+CGG | - | chr4_1:69028234-69028253 | Msa0567700:CDS | 30.0% | |
| TGCTATCTGTTTATTGTTTC+GGG | - | chr4_1:69028235-69028254 | Msa0567700:CDS | 30.0% | |
| ATGTCAAAATCAAACCTTCA+AGG | - | chr4_1:69028273-69028292 | Msa0567700:CDS | 30.0% | |
| CTTGAGAACCTTCAAGTAAA+AGG | + | chr4_1:69026115-69026134 | None:intergenic | 35.0% | |
| ! | CTTTTACTTGAAGGTTCTCA+AGG | - | chr4_1:69026113-69026132 | Msa0567700:three_prime_UTR | 35.0% |
| TTTACATGTTGGTGCATACA+CGG | + | chr4_1:69026158-69026177 | None:intergenic | 35.0% | |
| !! | TCCTTATGAACGTTTTGACA+CGG | - | chr4_1:69026224-69026243 | Msa0567700:three_prime_UTR | 35.0% |
| CCCTGAAACAAAATCAGTAA+AGG | + | chr4_1:69026251-69026270 | None:intergenic | 35.0% | |
| TTAGTACTCACTCTCTTCAT+TGG | - | chr4_1:69026460-69026479 | Msa0567700:intron | 35.0% | |
| TTCATTGGATGAGATCAATG+TGG | - | chr4_1:69026475-69026494 | Msa0567700:intron | 35.0% | |
| GTAATAGATCCCACATTAAG+TGG | + | chr4_1:69026507-69026526 | None:intergenic | 35.0% | |
| TGGGATCTATTACAAAGTGT+GGG | - | chr4_1:69026514-69026533 | Msa0567700:intron | 35.0% | |
| AAAATGAACATAGTTGCTCC+TGG | - | chr4_1:69026654-69026673 | Msa0567700:intron | 35.0% | |
| AAATGAACATAGTTGCTCCT+GGG | - | chr4_1:69026655-69026674 | Msa0567700:intron | 35.0% | |
| TTGACTAATAGCAGCTATAG+TGG | + | chr4_1:69026792-69026811 | None:intergenic | 35.0% | |
| ! | GTGATTTGTACAAATTCCAG+TGG | - | chr4_1:69026845-69026864 | Msa0567700:intron | 35.0% |
| !! | TCATTTAATGAGGGTACCTT+AGG | - | chr4_1:69026963-69026982 | Msa0567700:intron | 35.0% |
| GGCAACATCTGAATAAATGT+TGG | + | chr4_1:69027086-69027105 | None:intergenic | 35.0% | |
| !! | AGTTCTAAGGAGTATACTCA+TGG | - | chr4_1:69027267-69027286 | Msa0567700:CDS | 35.0% |
| CAGATATAAACCGTGAGATT+GGG | + | chr4_1:69027321-69027340 | None:intergenic | 35.0% | |
| TCAGATATAAACCGTGAGAT+TGG | + | chr4_1:69027322-69027341 | None:intergenic | 35.0% | |
| ATGATGTCATACACCAGAAT+GGG | + | chr4_1:69027375-69027394 | None:intergenic | 35.0% | |
| !! | TGCTTAGGTAGCTTGTTAAA+TGG | - | chr4_1:69027491-69027510 | Msa0567700:intron | 35.0% |
| TCCCGTAAACTATATAACTC+AGG | - | chr4_1:69027526-69027545 | Msa0567700:intron | 35.0% | |
| ATCATGCTATCATTTCCTCT+TGG | - | chr4_1:69027563-69027582 | Msa0567700:intron | 35.0% | |
| !! | GAATTGTGTCATTTACCAAG+AGG | + | chr4_1:69027581-69027600 | None:intergenic | 35.0% |
| ! | TTGGATTTGGTAAACAGGTA+TGG | - | chr4_1:69027828-69027847 | Msa0567700:intron | 35.0% |
| GATAGTGATTTCAGGACAAT+AGG | + | chr4_1:69027869-69027888 | None:intergenic | 35.0% | |
| TTATCCTCACTACATAAGCT+CGG | + | chr4_1:69027921-69027940 | None:intergenic | 35.0% | |
| TACTTGCCATATACTTCAAG+TGG | - | chr4_1:69027960-69027979 | Msa0567700:intron | 35.0% | |
| ! | CTTGGTTTCCTCTTCTTTTT+AGG | - | chr4_1:69028040-69028059 | Msa0567700:intron | 35.0% |
| !! | TCCTCTTCTTTTTAGGAACA+AGG | - | chr4_1:69028047-69028066 | Msa0567700:intron | 35.0% |
| TCCTTGTTCCTAAAAAGAAG+AGG | + | chr4_1:69028051-69028070 | None:intergenic | 35.0% | |
| ! | TTTCCACTCACATGTTCTTT+TGG | - | chr4_1:69028095-69028114 | Msa0567700:intron | 35.0% |
| GCAATTGAGTTTCAGAATGT+TGG | + | chr4_1:69028150-69028169 | None:intergenic | 35.0% | |
| !! | TTCTGAAACTCAATTGCCAT+AGG | - | chr4_1:69028153-69028172 | Msa0567700:CDS | 35.0% |
| TTCTTAAAGCTCAATGTGTC+TGG | - | chr4_1:69028209-69028228 | Msa0567700:CDS | 35.0% | |
| CGAAACAATAAACAGATAGC+AGG | + | chr4_1:69028236-69028255 | None:intergenic | 35.0% | |
| CTTGAGAACCTTCAAGTAAA+AGG | + | chr4_1:69026115-69026134 | None:intergenic | 35.0% | |
| ! | CTTTTACTTGAAGGTTCTCA+AGG | - | chr4_1:69026113-69026132 | Msa0567700:three_prime_UTR | 35.0% |
| TTTACATGTTGGTGCATACA+CGG | + | chr4_1:69026158-69026177 | None:intergenic | 35.0% | |
| !! | TCCTTATGAACGTTTTGACA+CGG | - | chr4_1:69026224-69026243 | Msa0567700:three_prime_UTR | 35.0% |
| CCCTGAAACAAAATCAGTAA+AGG | + | chr4_1:69026251-69026270 | None:intergenic | 35.0% | |
| TTAGTACTCACTCTCTTCAT+TGG | - | chr4_1:69026460-69026479 | Msa0567700:intron | 35.0% | |
| TTCATTGGATGAGATCAATG+TGG | - | chr4_1:69026475-69026494 | Msa0567700:intron | 35.0% | |
| GTAATAGATCCCACATTAAG+TGG | + | chr4_1:69026507-69026526 | None:intergenic | 35.0% | |
| TGGGATCTATTACAAAGTGT+GGG | - | chr4_1:69026514-69026533 | Msa0567700:intron | 35.0% | |
| AAAATGAACATAGTTGCTCC+TGG | - | chr4_1:69026654-69026673 | Msa0567700:intron | 35.0% | |
| AAATGAACATAGTTGCTCCT+GGG | - | chr4_1:69026655-69026674 | Msa0567700:intron | 35.0% | |
| TTGACTAATAGCAGCTATAG+TGG | + | chr4_1:69026792-69026811 | None:intergenic | 35.0% | |
| ! | GTGATTTGTACAAATTCCAG+TGG | - | chr4_1:69026845-69026864 | Msa0567700:intron | 35.0% |
| !! | TCATTTAATGAGGGTACCTT+AGG | - | chr4_1:69026963-69026982 | Msa0567700:intron | 35.0% |
| GGCAACATCTGAATAAATGT+TGG | + | chr4_1:69027086-69027105 | None:intergenic | 35.0% | |
| !! | AGTTCTAAGGAGTATACTCA+TGG | - | chr4_1:69027267-69027286 | Msa0567700:CDS | 35.0% |
| CAGATATAAACCGTGAGATT+GGG | + | chr4_1:69027321-69027340 | None:intergenic | 35.0% | |
| TCAGATATAAACCGTGAGAT+TGG | + | chr4_1:69027322-69027341 | None:intergenic | 35.0% | |
| ATGATGTCATACACCAGAAT+GGG | + | chr4_1:69027375-69027394 | None:intergenic | 35.0% | |
| !! | TGCTTAGGTAGCTTGTTAAA+TGG | - | chr4_1:69027491-69027510 | Msa0567700:intron | 35.0% |
| TCCCGTAAACTATATAACTC+AGG | - | chr4_1:69027526-69027545 | Msa0567700:intron | 35.0% | |
| ATCATGCTATCATTTCCTCT+TGG | - | chr4_1:69027563-69027582 | Msa0567700:intron | 35.0% | |
| !! | GAATTGTGTCATTTACCAAG+AGG | + | chr4_1:69027581-69027600 | None:intergenic | 35.0% |
| ! | TTGGATTTGGTAAACAGGTA+TGG | - | chr4_1:69027828-69027847 | Msa0567700:intron | 35.0% |
| GATAGTGATTTCAGGACAAT+AGG | + | chr4_1:69027869-69027888 | None:intergenic | 35.0% | |
| TTATCCTCACTACATAAGCT+CGG | + | chr4_1:69027921-69027940 | None:intergenic | 35.0% | |
| TACTTGCCATATACTTCAAG+TGG | - | chr4_1:69027960-69027979 | Msa0567700:intron | 35.0% | |
| ! | CTTGGTTTCCTCTTCTTTTT+AGG | - | chr4_1:69028040-69028059 | Msa0567700:intron | 35.0% |
| !! | TCCTCTTCTTTTTAGGAACA+AGG | - | chr4_1:69028047-69028066 | Msa0567700:intron | 35.0% |
| TCCTTGTTCCTAAAAAGAAG+AGG | + | chr4_1:69028051-69028070 | None:intergenic | 35.0% | |
| ! | TTTCCACTCACATGTTCTTT+TGG | - | chr4_1:69028095-69028114 | Msa0567700:intron | 35.0% |
| GCAATTGAGTTTCAGAATGT+TGG | + | chr4_1:69028150-69028169 | None:intergenic | 35.0% | |
| !! | TTCTGAAACTCAATTGCCAT+AGG | - | chr4_1:69028153-69028172 | Msa0567700:CDS | 35.0% |
| TTCTTAAAGCTCAATGTGTC+TGG | - | chr4_1:69028209-69028228 | Msa0567700:CDS | 35.0% | |
| CGAAACAATAAACAGATAGC+AGG | + | chr4_1:69028236-69028255 | None:intergenic | 35.0% | |
| ACAGCATAAGTATAGTGGTC+AGG | + | chr4_1:69026042-69026061 | None:intergenic | 40.0% | |
| GTGTCAAAACGTTCATAAGG+AGG | + | chr4_1:69026225-69026244 | None:intergenic | 40.0% | |
| TCCGTGTCAAAACGTTCATA+AGG | + | chr4_1:69026228-69026247 | None:intergenic | 40.0% | |
| ! | ATTTTGCTAGCACTCCTCTA+TGG | + | chr4_1:69026421-69026440 | None:intergenic | 40.0% |
| TAGATCCCACATTAAGTGGT+GGG | + | chr4_1:69026503-69026522 | None:intergenic | 40.0% | |
| ATAGATCCCACATTAAGTGG+TGG | + | chr4_1:69026504-69026523 | None:intergenic | 40.0% | |
| GTGGGATCTATTACAAAGTG+TGG | - | chr4_1:69026513-69026532 | Msa0567700:intron | 40.0% | |
| GGGATCTATTACAAAGTGTG+GGG | - | chr4_1:69026515-69026534 | Msa0567700:intron | 40.0% | |
| GGAATAAATACCTAGAACCC+AGG | + | chr4_1:69026675-69026694 | None:intergenic | 40.0% | |
| ACCACTAATCGCTGAAAAAG+TGG | - | chr4_1:69026729-69026748 | Msa0567700:intron | 40.0% | |
| !!! | ACCACTTTTTCAGCGATTAG+TGG | + | chr4_1:69026733-69026752 | None:intergenic | 40.0% |
| TTGTTAAATAGCGGCTACAG+CGG | + | chr4_1:69026888-69026907 | None:intergenic | 40.0% | |
| ! | AATGAATTTTGTCGCCAGGA+TGG | - | chr4_1:69026918-69026937 | Msa0567700:intron | 40.0% |
| ATTACACAACGGCTAACACA+AGG | + | chr4_1:69027107-69027126 | None:intergenic | 40.0% | |
| GTAGTGATACGATTTCGATC+AGG | - | chr4_1:69027291-69027310 | Msa0567700:CDS | 40.0% | |
| !! | TGGGTTAGCACAACCAAATT+GGG | + | chr4_1:69027356-69027375 | None:intergenic | 40.0% |
| !! | ATGGGTTAGCACAACCAAAT+TGG | + | chr4_1:69027357-69027376 | None:intergenic | 40.0% |
| GATGATGTCATACACCAGAA+TGG | + | chr4_1:69027376-69027395 | None:intergenic | 40.0% | |
| TCATTTCTCTGTTGATCCAG+TGG | - | chr4_1:69027892-69027911 | Msa0567700:intron | 40.0% | |
| CATTTCTCTGTTGATCCAGT+GGG | - | chr4_1:69027893-69027912 | Msa0567700:intron | 40.0% | |
| ! | TGTCTGCCACTTGAAGTATA+TGG | + | chr4_1:69027969-69027988 | None:intergenic | 40.0% |
| ATGTGAGTGGAAATAGAAGC+AGG | + | chr4_1:69028088-69028107 | None:intergenic | 40.0% | |
| TAGCCAAAAGAACATGTGAG+TGG | + | chr4_1:69028101-69028120 | None:intergenic | 40.0% | |
| ACAGCATAAGTATAGTGGTC+AGG | + | chr4_1:69026042-69026061 | None:intergenic | 40.0% | |
| GTGTCAAAACGTTCATAAGG+AGG | + | chr4_1:69026225-69026244 | None:intergenic | 40.0% | |
| TCCGTGTCAAAACGTTCATA+AGG | + | chr4_1:69026228-69026247 | None:intergenic | 40.0% | |
| ! | ATTTTGCTAGCACTCCTCTA+TGG | + | chr4_1:69026421-69026440 | None:intergenic | 40.0% |
| TAGATCCCACATTAAGTGGT+GGG | + | chr4_1:69026503-69026522 | None:intergenic | 40.0% | |
| ATAGATCCCACATTAAGTGG+TGG | + | chr4_1:69026504-69026523 | None:intergenic | 40.0% | |
| GTGGGATCTATTACAAAGTG+TGG | - | chr4_1:69026513-69026532 | Msa0567700:intron | 40.0% | |
| GGGATCTATTACAAAGTGTG+GGG | - | chr4_1:69026515-69026534 | Msa0567700:intron | 40.0% | |
| GGAATAAATACCTAGAACCC+AGG | + | chr4_1:69026675-69026694 | None:intergenic | 40.0% | |
| ACCACTAATCGCTGAAAAAG+TGG | - | chr4_1:69026729-69026748 | Msa0567700:intron | 40.0% | |
| !!! | ACCACTTTTTCAGCGATTAG+TGG | + | chr4_1:69026733-69026752 | None:intergenic | 40.0% |
| TTGTTAAATAGCGGCTACAG+CGG | + | chr4_1:69026888-69026907 | None:intergenic | 40.0% | |
| ! | AATGAATTTTGTCGCCAGGA+TGG | - | chr4_1:69026918-69026937 | Msa0567700:intron | 40.0% |
| ATTACACAACGGCTAACACA+AGG | + | chr4_1:69027107-69027126 | None:intergenic | 40.0% | |
| GTAGTGATACGATTTCGATC+AGG | - | chr4_1:69027291-69027310 | Msa0567700:CDS | 40.0% | |
| !! | TGGGTTAGCACAACCAAATT+GGG | + | chr4_1:69027356-69027375 | None:intergenic | 40.0% |
| !! | ATGGGTTAGCACAACCAAAT+TGG | + | chr4_1:69027357-69027376 | None:intergenic | 40.0% |
| GATGATGTCATACACCAGAA+TGG | + | chr4_1:69027376-69027395 | None:intergenic | 40.0% | |
| TCATTTCTCTGTTGATCCAG+TGG | - | chr4_1:69027892-69027911 | Msa0567700:intron | 40.0% | |
| CATTTCTCTGTTGATCCAGT+GGG | - | chr4_1:69027893-69027912 | Msa0567700:intron | 40.0% | |
| ! | TGTCTGCCACTTGAAGTATA+TGG | + | chr4_1:69027969-69027988 | None:intergenic | 40.0% |
| ATGTGAGTGGAAATAGAAGC+AGG | + | chr4_1:69028088-69028107 | None:intergenic | 40.0% | |
| TAGCCAAAAGAACATGTGAG+TGG | + | chr4_1:69028101-69028120 | None:intergenic | 40.0% | |
| ! | GAGAGTCGGTGTTTACATGT+TGG | + | chr4_1:69026169-69026188 | None:intergenic | 45.0% |
| TGGATCCCACCACTTAATGT+GGG | - | chr4_1:69026495-69026514 | Msa0567700:intron | 45.0% | |
| GCTTCTTTGGCCATAACCTA+GGG | - | chr4_1:69026596-69026615 | Msa0567700:intron | 45.0% | |
| CTTCTTTGGCCATAACCTAG+GGG | - | chr4_1:69026597-69026616 | Msa0567700:intron | 45.0% | |
| GGTATAATGCTACAGTCCAC+TGG | + | chr4_1:69026864-69026883 | None:intergenic | 45.0% | |
| GAATAAACTCCACTCCATCC+TGG | + | chr4_1:69026935-69026954 | None:intergenic | 45.0% | |
| ATCTCTGGCAACAGTGATGT+TGG | - | chr4_1:69027010-69027029 | Msa0567700:CDS | 45.0% | |
| ATCAGGTGATCCCAATCTCA+CGG | - | chr4_1:69027308-69027327 | Msa0567700:CDS | 45.0% | |
| GTTAGCACAACCAAATTGGG+AGG | + | chr4_1:69027353-69027372 | None:intergenic | 45.0% | |
| TTGGTTGTGCTAACCCATTC+TGG | - | chr4_1:69027359-69027378 | Msa0567700:intron | 45.0% | |
| GACATCATCTTCTGCAGTTG+AGG | - | chr4_1:69027387-69027406 | Msa0567700:intron | 45.0% | |
| GTGATTTCAGGACAATAGGC+TGG | + | chr4_1:69027865-69027884 | None:intergenic | 45.0% | |
| GTAGAAAAGCTGCGAGCATT+TGG | + | chr4_1:69028009-69028028 | None:intergenic | 45.0% | |
| ! | GAGAGTCGGTGTTTACATGT+TGG | + | chr4_1:69026169-69026188 | None:intergenic | 45.0% |
| TGGATCCCACCACTTAATGT+GGG | - | chr4_1:69026495-69026514 | Msa0567700:intron | 45.0% | |
| GCTTCTTTGGCCATAACCTA+GGG | - | chr4_1:69026596-69026615 | Msa0567700:intron | 45.0% | |
| CTTCTTTGGCCATAACCTAG+GGG | - | chr4_1:69026597-69026616 | Msa0567700:intron | 45.0% | |
| GGTATAATGCTACAGTCCAC+TGG | + | chr4_1:69026864-69026883 | None:intergenic | 45.0% | |
| GAATAAACTCCACTCCATCC+TGG | + | chr4_1:69026935-69026954 | None:intergenic | 45.0% | |
| ATCTCTGGCAACAGTGATGT+TGG | - | chr4_1:69027010-69027029 | Msa0567700:CDS | 45.0% | |
| ATCAGGTGATCCCAATCTCA+CGG | - | chr4_1:69027308-69027327 | Msa0567700:CDS | 45.0% | |
| GTTAGCACAACCAAATTGGG+AGG | + | chr4_1:69027353-69027372 | None:intergenic | 45.0% | |
| TTGGTTGTGCTAACCCATTC+TGG | - | chr4_1:69027359-69027378 | Msa0567700:intron | 45.0% | |
| GACATCATCTTCTGCAGTTG+AGG | - | chr4_1:69027387-69027406 | Msa0567700:intron | 45.0% | |
| GTGATTTCAGGACAATAGGC+TGG | + | chr4_1:69027865-69027884 | None:intergenic | 45.0% | |
| GTAGAAAAGCTGCGAGCATT+TGG | + | chr4_1:69028009-69028028 | None:intergenic | 45.0% | |
| ! | TCTAGCTTATGTGCTCCTGC+AGG | - | chr4_1:69025997-69026016 | Msa0567700:three_prime_UTR | 50.0% |
| CTAGCTTATGTGCTCCTGCA+GGG | - | chr4_1:69025998-69026017 | Msa0567700:three_prime_UTR | 50.0% | |
| GTGGATCCCACCACTTAATG+TGG | - | chr4_1:69026494-69026513 | Msa0567700:intron | 50.0% | |
| ACGTTGCTAGCACGCTTCTT+TGG | - | chr4_1:69026583-69026602 | Msa0567700:intron | 50.0% | |
| CGCTTCTTTGGCCATAACCT+AGG | - | chr4_1:69026595-69026614 | Msa0567700:intron | 50.0% | |
| AATCTGCTGCCCCTAGGTTA+TGG | + | chr4_1:69026609-69026628 | None:intergenic | 50.0% | |
| ACGTAAAATCTGCTGCCCCT+AGG | + | chr4_1:69026615-69026634 | None:intergenic | 50.0% | |
| CATAGTTGCTCCTGGGTTCT+AGG | - | chr4_1:69026662-69026681 | Msa0567700:intron | 50.0% | |
| AGCAGCTATAGTGGCGCAAT+AGG | + | chr4_1:69026783-69026802 | None:intergenic | 50.0% | |
| TTAAATAGCGGCTACAGCGG+TGG | + | chr4_1:69026885-69026904 | None:intergenic | 50.0% | |
| ! | ATTTTGTCGCCAGGATGGAG+TGG | - | chr4_1:69026923-69026942 | Msa0567700:intron | 50.0% |
| !! | TGAGGGTACCTTAGGTAACC+AGG | - | chr4_1:69026971-69026990 | Msa0567700:intron | 50.0% |
| ATGTTCCGCCTGGTTACCTA+AGG | + | chr4_1:69026982-69027001 | None:intergenic | 50.0% | |
| TACATAAGCTCGGTTCCCAC+TGG | + | chr4_1:69027911-69027930 | None:intergenic | 50.0% | |
| GGAACCGAGCTTATGTAGTG+AGG | - | chr4_1:69027914-69027933 | Msa0567700:intron | 50.0% | |
| ! | TCTAGCTTATGTGCTCCTGC+AGG | - | chr4_1:69025997-69026016 | Msa0567700:three_prime_UTR | 50.0% |
| CTAGCTTATGTGCTCCTGCA+GGG | - | chr4_1:69025998-69026017 | Msa0567700:three_prime_UTR | 50.0% | |
| GTGGATCCCACCACTTAATG+TGG | - | chr4_1:69026494-69026513 | Msa0567700:intron | 50.0% | |
| ACGTTGCTAGCACGCTTCTT+TGG | - | chr4_1:69026583-69026602 | Msa0567700:intron | 50.0% | |
| CGCTTCTTTGGCCATAACCT+AGG | - | chr4_1:69026595-69026614 | Msa0567700:intron | 50.0% | |
| AATCTGCTGCCCCTAGGTTA+TGG | + | chr4_1:69026609-69026628 | None:intergenic | 50.0% | |
| ACGTAAAATCTGCTGCCCCT+AGG | + | chr4_1:69026615-69026634 | None:intergenic | 50.0% | |
| CATAGTTGCTCCTGGGTTCT+AGG | - | chr4_1:69026662-69026681 | Msa0567700:intron | 50.0% | |
| AGCAGCTATAGTGGCGCAAT+AGG | + | chr4_1:69026783-69026802 | None:intergenic | 50.0% | |
| TTAAATAGCGGCTACAGCGG+TGG | + | chr4_1:69026885-69026904 | None:intergenic | 50.0% | |
| ! | ATTTTGTCGCCAGGATGGAG+TGG | - | chr4_1:69026923-69026942 | Msa0567700:intron | 50.0% |
| !! | TGAGGGTACCTTAGGTAACC+AGG | - | chr4_1:69026971-69026990 | Msa0567700:intron | 50.0% |
| ATGTTCCGCCTGGTTACCTA+AGG | + | chr4_1:69026982-69027001 | None:intergenic | 50.0% | |
| TACATAAGCTCGGTTCCCAC+TGG | + | chr4_1:69027911-69027930 | None:intergenic | 50.0% | |
| GGAACCGAGCTTATGTAGTG+AGG | - | chr4_1:69027914-69027933 | Msa0567700:intron | 50.0% | |
| GGGTACCTTAGGTAACCAGG+CGG | - | chr4_1:69026974-69026993 | Msa0567700:intron | 55.0% | |
| TAACCAGGCGGAACATGCAC+TGG | - | chr4_1:69026986-69027005 | Msa0567700:CDS | 55.0% | |
| ! | GGAACATGCACTGGCATCTC+TGG | - | chr4_1:69026995-69027014 | Msa0567700:CDS | 55.0% |
| GGGTACCTTAGGTAACCAGG+CGG | - | chr4_1:69026974-69026993 | Msa0567700:intron | 55.0% | |
| TAACCAGGCGGAACATGCAC+TGG | - | chr4_1:69026986-69027005 | Msa0567700:CDS | 55.0% | |
| ! | GGAACATGCACTGGCATCTC+TGG | - | chr4_1:69026995-69027014 | Msa0567700:CDS | 55.0% |
| TGAGCAGAAACACGCCCTGC+AGG | + | chr4_1:69026015-69026034 | None:intergenic | 60.0% | |
| ATGCCAGTGCATGTTCCGCC+TGG | + | chr4_1:69026992-69027011 | None:intergenic | 60.0% | |
| TGAGCAGAAACACGCCCTGC+AGG | + | chr4_1:69026015-69026034 | None:intergenic | 60.0% | |
| ATGCCAGTGCATGTTCCGCC+TGG | + | chr4_1:69026992-69027011 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 69025994 | 69028313 | 69025994 | ID=Msa0567700;Name=Msa0567700 |
| chr4_1 | mRNA | 69025994 | 69028313 | 69025994 | ID=Msa0567700-mRNA-1;Parent=Msa0567700;Name=Msa0567700-mRNA-1;_AED=0.14;_eAED=0.16;_QI=0|0.8|0.66|1|0.8|0.66|6|266|176 |
| chr4_1 | exon | 69025994 | 69026245 | 69025994 | ID=Msa0567700-mRNA-1:exon:23060;Parent=Msa0567700-mRNA-1 |
| chr4_1 | exon | 69026362 | 69026462 | 69026362 | ID=Msa0567700-mRNA-1:exon:23059;Parent=Msa0567700-mRNA-1 |
| chr4_1 | exon | 69026978 | 69027057 | 69026978 | ID=Msa0567700-mRNA-1:exon:23058;Parent=Msa0567700-mRNA-1 |
| chr4_1 | exon | 69027242 | 69027371 | 69027242 | ID=Msa0567700-mRNA-1:exon:23057;Parent=Msa0567700-mRNA-1 |
| chr4_1 | exon | 69027970 | 69028038 | 69027970 | ID=Msa0567700-mRNA-1:exon:23056;Parent=Msa0567700-mRNA-1 |
| chr4_1 | exon | 69028149 | 69028313 | 69028149 | ID=Msa0567700-mRNA-1:exon:23055;Parent=Msa0567700-mRNA-1 |
| chr4_1 | CDS | 69028149 | 69028313 | 69028149 | ID=Msa0567700-mRNA-1:cds;Parent=Msa0567700-mRNA-1 |
| chr4_1 | CDS | 69027970 | 69028038 | 69027970 | ID=Msa0567700-mRNA-1:cds;Parent=Msa0567700-mRNA-1 |
| chr4_1 | CDS | 69027242 | 69027371 | 69027242 | ID=Msa0567700-mRNA-1:cds;Parent=Msa0567700-mRNA-1 |
| chr4_1 | CDS | 69026978 | 69027057 | 69026978 | ID=Msa0567700-mRNA-1:cds;Parent=Msa0567700-mRNA-1 |
| chr4_1 | CDS | 69026376 | 69026462 | 69026376 | ID=Msa0567700-mRNA-1:cds;Parent=Msa0567700-mRNA-1 |
| chr4_1 | three_prime_UTR | 69026362 | 69026375 | 69026362 | ID=Msa0567700-mRNA-1:three_prime_utr;Parent=Msa0567700-mRNA-1 |
| chr4_1 | three_prime_UTR | 69025994 | 69026245 | 69025994 | ID=Msa0567700-mRNA-1:three_prime_utr;Parent=Msa0567700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
