Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0607510 | Msa0724760 | 0.806303 | 8.783685e-50 | -8.615850e-47 |
| Msa0724760 | Msa0940830 | 0.817699 | 2.879253e-52 | -8.615850e-47 |
| Msa0724760 | Msa1010720 | 0.953500 | 2.389471e-111 | -8.615850e-47 |
| Msa0212750 | Msa0724760 | -0.810630 | 1.047731e-50 | -8.615850e-47 |
| Msa0285060 | Msa0724760 | 0.889747 | 1.836138e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCTATGGACTTGGATTT+TGG | 0.210628 | 5_1:-23840069 | Msa0724760:three_prime_UTR |
| TTACAGAAATGCCCCTTCTT+TGG | 0.261089 | 5_1:-23842792 | Msa0724760:five_prime_UTR |
| GGTGGTGGCGGCCGGATAAC+AGG | 0.269132 | 5_1:+23842498 | None:intergenic |
| TCAATTCTTTCTTCTTGTTT+CGG | 0.280053 | 5_1:+23842327 | None:intergenic |
| CACCTTATCCAACACGAATA+TGG | 0.294160 | 5_1:+23839973 | None:intergenic |
| GAAGAACAAAATGCTGAGTT+TGG | 0.307400 | 5_1:+23839761 | None:intergenic |
| CCATCGCCATTATTTCAGTT+TGG | 0.312418 | 5_1:+23841639 | None:intergenic |
| ACATGGTAATCAATCTTTAC+AGG | 0.316120 | 5_1:-23841985 | Msa0724760:intron |
| CCTAGGGTTTGGCTAGGGTT+TGG | 0.322311 | 5_1:+23842831 | None:intergenic |
| CATCGCCATTATTTCAGTTT+GGG | 0.335244 | 5_1:+23841640 | None:intergenic |
| GGAGAAGGAAGGAGAGGTGG+TGG | 0.338181 | 5_1:+23842483 | None:intergenic |
| TGGAGTTAACGGAGGGAGAT+AGG | 0.346395 | 5_1:-23842034 | Msa0724760:five_prime_UTR |
| AATTAGCCAATCAGATTTAG+AGG | 0.348061 | 5_1:-23842690 | Msa0724760:five_prime_UTR |
| CGCCATATTCGTGTTGGATA+AGG | 0.355732 | 5_1:-23839975 | Msa0724760:three_prime_UTR |
| AACTGATAGAAGGGTGTAGA+TGG | 0.360633 | 5_1:+23842437 | None:intergenic |
| TGTCTATTGTTTCAGGCTGT+TGG | 0.360762 | 5_1:-23840238 | Msa0724760:intron |
| GAATTTATTGAACCACGAAT+TGG | 0.362261 | 5_1:-23841772 | Msa0724760:five_prime_UTR |
| AAGGTGACGTAGTTGTGTTT+TGG | 0.362369 | 5_1:-23839956 | Msa0724760:three_prime_UTR |
| CGGTGGTGGTGAGAGGGAAT+CGG | 0.367793 | 5_1:-23842058 | Msa0724760:five_prime_UTR |
| AACAGGGACGGTGGTGGTAG+GGG | 0.370468 | 5_1:+23842515 | None:intergenic |
| TGTAGCGGCAGGTGACTAAA+AGG | 0.370894 | 5_1:-23841736 | Msa0724760:five_prime_UTR |
| TTGTTCCCAAACTGAAATAA+TGG | 0.377260 | 5_1:-23841645 | Msa0724760:five_prime_UTR |
| TGAAAGAAAACTGTCGATTC+CGG | 0.380091 | 5_1:-23842372 | Msa0724760:five_prime_UTR |
| TAACAACCAATCAGGTTTAG+AGG | 0.381706 | 5_1:-23842658 | Msa0724760:five_prime_UTR |
| GACAGATAGAAACTGATAGA+AGG | 0.385902 | 5_1:+23842427 | None:intergenic |
| TCCTCGTCCGCTGCCACCGC+CGG | 0.389280 | 5_1:+23842353 | None:intergenic |
| ATCCCTTGGCAAACAAGTTC+CGG | 0.394223 | 5_1:-23840394 | Msa0724760:CDS |
| AGGGAATCGGGTGGAGTTAA+CGG | 0.397949 | 5_1:-23842045 | Msa0724760:five_prime_UTR |
| TATTGAGATGAGATGTTTCA+AGG | 0.399668 | 5_1:-23839814 | Msa0724760:three_prime_UTR |
| ACTACACACTTACATTTACT+TGG | 0.404350 | 5_1:+23840634 | None:intergenic |
| ACAGACATGACAGTGAGGTT+AGG | 0.415868 | 5_1:-23842283 | Msa0724760:five_prime_UTR |
| GAAGGAGAGGTGGTGGCGGC+CGG | 0.416526 | 5_1:+23842490 | None:intergenic |
| CAGACATGACAGTGAGGTTA+GGG | 0.418002 | 5_1:-23842282 | Msa0724760:five_prime_UTR |
| GTCGATTCCGGCGGTGGCAG+CGG | 0.420451 | 5_1:-23842360 | Msa0724760:five_prime_UTR |
| TGGGTGGATGTTACGCCTAT+AGG | 0.421369 | 5_1:-23839936 | Msa0724760:three_prime_UTR |
| TCCGGCGGTGGCAGCGGACG+AGG | 0.423398 | 5_1:-23842354 | Msa0724760:five_prime_UTR |
| GGTGGGGTGGCCTCACGAAA+GGG | 0.427675 | 5_1:+23842461 | None:intergenic |
| CGGTCGCTTGCACGATGCTA+TGG | 0.428607 | 5_1:+23841585 | None:intergenic |
| TTTGCAAGTAACAACCAATC+AGG | 0.428775 | 5_1:-23842666 | Msa0724760:five_prime_UTR |
| AGTGTGATATCACATCATTT+TGG | 0.429284 | 5_1:+23842767 | None:intergenic |
| TAGTTGTGTTTGTCTTGAAT+TGG | 0.429851 | 5_1:+23842729 | None:intergenic |
| CAATACAAAATGCCGCCTAT+AGG | 0.430621 | 5_1:+23839921 | None:intergenic |
| AGATTTCAAAGTCATAGCTT+TGG | 0.431434 | 5_1:-23840036 | Msa0724760:three_prime_UTR |
| TGTGGCAGCTGCTGTTTGCT+TGG | 0.434687 | 5_1:-23840128 | Msa0724760:CDS |
| ACCAAGATGATCCTAGGGTT+TGG | 0.437500 | 5_1:+23842820 | None:intergenic |
| CCATTACATGACAATACAAC+TGG | 0.444073 | 5_1:-23841475 | Msa0724760:intron |
| CAACAGCAAAATAAACCAAT+AGG | 0.444143 | 5_1:-23842623 | Msa0724760:five_prime_UTR |
| TAAATCCTGATCATCTTGTA+TGG | 0.445839 | 5_1:+23840320 | None:intergenic |
| ACAGGGACGGTGGTGGTAGG+GGG | 0.447718 | 5_1:+23842516 | None:intergenic |
| CCACCACCGTCCCTGTTATC+CGG | 0.450002 | 5_1:-23842509 | Msa0724760:five_prime_UTR |
| GGTGGTGGTGAGAGGGAATC+GGG | 0.451690 | 5_1:-23842057 | Msa0724760:five_prime_UTR |
| TGGACGGCTGTGGGAGGTAG+TGG | 0.452062 | 5_1:-23840093 | Msa0724760:exon |
| GTGGGGTGGCCTCACGAAAG+GGG | 0.454471 | 5_1:+23842462 | None:intergenic |
| GCAAACCCTCTAAACCTGAT+TGG | 0.455963 | 5_1:+23842652 | None:intergenic |
| TAACAGGGACGGTGGTGGTA+GGG | 0.456102 | 5_1:+23842514 | None:intergenic |
| TTGCTTGGAGTCATTGTTTG+TGG | 0.456662 | 5_1:-23840113 | Msa0724760:CDS |
| TCTATCTGTGTTGTGCATAA+AGG | 0.457460 | 5_1:+23841501 | None:intergenic |
| CGTGGAGCAAGATATCCTAT+TGG | 0.459264 | 5_1:+23842608 | None:intergenic |
| CCAGTTGTATTGTCATGTAA+TGG | 0.460265 | 5_1:+23841475 | None:intergenic |
| GATGAAGCGAGCATTCAATA+TGG | 0.460356 | 5_1:-23841538 | Msa0724760:CDS |
| ACAGTTAGCTACAAATGTTT+CGG | 0.466433 | 5_1:-23841844 | Msa0724760:intron |
| GGAGTCCATACAAGATGATC+AGG | 0.470741 | 5_1:-23840325 | Msa0724760:CDS |
| CCAAGGGATGAAAATTGAAT+CGG | 0.474238 | 5_1:+23840408 | None:intergenic |
| GCAGCTGCCACAGCTAAAAC+AGG | 0.475173 | 5_1:+23840139 | None:intergenic |
| ATTGTTTCAGGCTGTTGGCT+CGG | 0.477917 | 5_1:-23840233 | Msa0724760:intron |
| GAGATTGCGGTGGTGGTGAG+AGG | 0.479011 | 5_1:-23842065 | Msa0724760:five_prime_UTR |
| ATAACAGGGACGGTGGTGGT+AGG | 0.481221 | 5_1:+23842513 | None:intergenic |
| GCCTCAAGAAAAGACAAAAC+CGG | 0.481492 | 5_1:+23840375 | None:intergenic |
| GCCAAACCCTAGGATCATCT+TGG | 0.484423 | 5_1:-23842821 | Msa0724760:five_prime_UTR |
| GGGAGGTAGTGGCTCAGCTA+TGG | 0.486001 | 5_1:-23840082 | Msa0724760:exon |
| CGAATGCTTGTTCTCTTCAA+CGG | 0.486683 | 5_1:+23841565 | None:intergenic |
| TAGAAGGGTGTAGATGGTGG+TGG | 0.487186 | 5_1:+23842443 | None:intergenic |
| TGGTGGGGTGGCCTCACGAA+AGG | 0.488038 | 5_1:+23842460 | None:intergenic |
| GCAAACCCTCTAAATCTGAT+TGG | 0.490797 | 5_1:+23842684 | None:intergenic |
| TCTCAATCTTCTAACAATCA+TGG | 0.491896 | 5_1:-23840294 | Msa0724760:CDS |
| AGGGGAGAAGGAAGGAGAGG+TGG | 0.492140 | 5_1:+23842480 | None:intergenic |
| GGGTGTAGATGGTGGTGGGG+TGG | 0.495602 | 5_1:+23842448 | None:intergenic |
| TCTTCGATCCATCCAATTCG+TGG | 0.502069 | 5_1:+23841760 | None:intergenic |
| AAAACTGTCGATTCCGGCGG+TGG | 0.502588 | 5_1:-23842366 | Msa0724760:five_prime_UTR |
| CTACTTCGCCATATTCGTGT+TGG | 0.515336 | 5_1:-23839981 | Msa0724760:three_prime_UTR |
| GAAGGAAGGAGAGGTGGTGG+CGG | 0.517801 | 5_1:+23842486 | None:intergenic |
| TAGTGGCTCAGCTATGGACT+TGG | 0.520229 | 5_1:-23840076 | Msa0724760:three_prime_UTR |
| GTGAGAGGAGATTGCGGTGG+TGG | 0.521700 | 5_1:-23842072 | Msa0724760:five_prime_UTR |
| GGGTTCTGTTTCCAAGTCTG+AGG | 0.521871 | 5_1:-23840346 | Msa0724760:CDS |
| GGAGTTAACGGAGGGAGATA+GGG | 0.522842 | 5_1:-23842033 | Msa0724760:five_prime_UTR |
| TCATTGTTTGTGGACGGCTG+TGG | 0.523974 | 5_1:-23840103 | Msa0724760:CDS |
| AGAAGGGTGTAGATGGTGGT+GGG | 0.524240 | 5_1:+23842444 | None:intergenic |
| CCGGATAACAGGGACGGTGG+TGG | 0.527395 | 5_1:+23842509 | None:intergenic |
| TGGCCTCACGAAAGGGGAGA+AGG | 0.527728 | 5_1:+23842468 | None:intergenic |
| AACAACCAATCAGGTTTAGA+GGG | 0.532548 | 5_1:-23842657 | Msa0724760:five_prime_UTR |
| CATTGTTTGTGGACGGCTGT+GGG | 0.540531 | 5_1:-23840102 | Msa0724760:CDS |
| GTGGTGGCGGCCGGATAACA+GGG | 0.541415 | 5_1:+23842499 | None:intergenic |
| ACTAAAAGGATGACAGGTGT+AGG | 0.542353 | 5_1:-23841722 | Msa0724760:five_prime_UTR |
| CAGGTGACTAAAAGGATGAC+AGG | 0.545138 | 5_1:-23841728 | Msa0724760:five_prime_UTR |
| TTGGAGTCATTGTTTGTGGA+CGG | 0.547119 | 5_1:-23840109 | Msa0724760:CDS |
| GATGATCCTAGGGTTTGGCT+AGG | 0.551283 | 5_1:+23842825 | None:intergenic |
| AGGTGAAGATAGACTTCGAT+CGG | 0.552049 | 5_1:-23842398 | Msa0724760:five_prime_UTR |
| CCAAACTGAAATAATGGCGA+TGG | 0.553232 | 5_1:-23841639 | Msa0724760:five_prime_UTR |
| CTTCCTTCTCCCCTTTCGTG+AGG | 0.555775 | 5_1:-23842471 | Msa0724760:five_prime_UTR |
| ATGATCCTAGGGTTTGGCTA+GGG | 0.559063 | 5_1:+23842826 | None:intergenic |
| TTGTATGGACTCCTCAGACT+TGG | 0.559896 | 5_1:+23840335 | None:intergenic |
| TTGATTACCATGTGTTAATG+AGG | 0.564366 | 5_1:+23841995 | None:intergenic |
| AGATTGCGGTGGTGGTGAGA+GGG | 0.567430 | 5_1:-23842064 | Msa0724760:five_prime_UTR |
| AAACCGGAACTTGTTTGCCA+AGG | 0.570618 | 5_1:+23840391 | None:intergenic |
| GGATCGAAGACTGTAGCGGC+AGG | 0.571068 | 5_1:-23841747 | Msa0724760:five_prime_UTR |
| ACAGATAGAAACTGATAGAA+GGG | 0.571825 | 5_1:+23842428 | None:intergenic |
| AACCGGAACTTGTTTGCCAA+GGG | 0.574258 | 5_1:+23840392 | None:intergenic |
| ATCACACTACTGAAAGCAGC+TGG | 0.584544 | 5_1:-23842752 | Msa0724760:five_prime_UTR |
| GAAGGGTGTAGATGGTGGTG+GGG | 0.584914 | 5_1:+23842445 | None:intergenic |
| AGTGGCAACGCAACAGTGAG+AGG | 0.590007 | 5_1:-23842087 | Msa0724760:five_prime_UTR |
| ATTAGCCAATCAGATTTAGA+GGG | 0.590451 | 5_1:-23842689 | Msa0724760:five_prime_UTR |
| AGCGAAGATGAAGATGAAGA+AGG | 0.592403 | 5_1:-23841812 | Msa0724760:five_prime_UTR |
| CTCACGAAAGGGGAGAAGGA+AGG | 0.593511 | 5_1:+23842472 | None:intergenic |
| CTAAAAGGATGACAGGTGTA+GGG | 0.595320 | 5_1:-23841721 | Msa0724760:five_prime_UTR |
| ATCTTAACTATACAAATGAA+AGG | 0.597811 | 5_1:-23842865 | None:intergenic |
| TGTAGGGTTTATTGTAAACA+AGG | 0.600608 | 5_1:-23841705 | Msa0724760:five_prime_UTR |
| TTATTGAACCACGAATTGGA+TGG | 0.600940 | 5_1:-23841768 | Msa0724760:five_prime_UTR |
| GCGAGCATTCAATATGGTGG+AGG | 0.602271 | 5_1:-23841532 | Msa0724760:CDS |
| GAAGAGAACAAGCATTCGAA+TGG | 0.606719 | 5_1:-23841560 | Msa0724760:CDS |
| CCAAACCCTAGCCAAACCCT+AGG | 0.611987 | 5_1:-23842831 | Msa0724760:five_prime_UTR |
| GGTGGTGAGAGGGAATCGGG+TGG | 0.617114 | 5_1:-23842054 | Msa0724760:five_prime_UTR |
| TCTGTGTTGTGCATAAAGGA+AGG | 0.622104 | 5_1:+23841505 | None:intergenic |
| ATGTTTGGAAAGATATCACG+TGG | 0.624110 | 5_1:+23842590 | None:intergenic |
| GAAAGGGGAGAAGGAAGGAG+AGG | 0.626442 | 5_1:+23842477 | None:intergenic |
| CGGCCGGATAACAGGGACGG+TGG | 0.630542 | 5_1:+23842506 | None:intergenic |
| GGGTTTACACTTATTAAACA+CGG | 0.633042 | 5_1:-23842262 | Msa0724760:intron |
| TGTTTCTGCCTGCTGCGCAG+TGG | 0.642132 | 5_1:-23840170 | Msa0724760:CDS |
| AATCTGATTGGCTAATTGTG+TGG | 0.646710 | 5_1:+23842696 | None:intergenic |
| GAAGCGAGCATTCAATATGG+TGG | 0.648098 | 5_1:-23841535 | Msa0724760:CDS |
| TGATAGAAGGGTGTAGATGG+TGG | 0.649052 | 5_1:+23842440 | None:intergenic |
| GTCTCAGCCTCATTAACACA+TGG | 0.650642 | 5_1:-23842002 | Msa0724760:five_prime_UTR |
| GCAACAGTGAGAGGAGATTG+CGG | 0.651509 | 5_1:-23842078 | Msa0724760:five_prime_UTR |
| GGATGGATCGAAGACTGTAG+CGG | 0.671442 | 5_1:-23841751 | Msa0724760:five_prime_UTR |
| TGGCGGCCGGATAACAGGGA+CGG | 0.675887 | 5_1:+23842503 | None:intergenic |
| GTGGATGTTACGCCTATAGG+CGG | 0.677402 | 5_1:-23839933 | Msa0724760:three_prime_UTR |
| TGTTTGTGGACGGCTGTGGG+AGG | 0.680946 | 5_1:-23840099 | Msa0724760:CDS |
| AATCGGGTGGAGTTAACGGA+GGG | 0.686740 | 5_1:-23842041 | Msa0724760:five_prime_UTR |
| GAATCGGGTGGAGTTAACGG+AGG | 0.699783 | 5_1:-23842042 | Msa0724760:five_prime_UTR |
| AAGAAAACTGTCGATTCCGG+CGG | 0.713826 | 5_1:-23842369 | Msa0724760:five_prime_UTR |
| AGTTTCTATCTGTCTCAGAG+AGG | 0.725839 | 5_1:-23842418 | Msa0724760:five_prime_UTR |
| ATCAAACAGACATGACAGTG+AGG | 0.732212 | 5_1:-23842288 | Msa0724760:five_prime_UTR |
| ACAGTGAGAGGAGATTGCGG+TGG | 0.746231 | 5_1:-23842075 | Msa0724760:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATATATAAACACT+TGG | + | chr5_1:23841928-23841947 | None:intergenic | 10.0% |
| !! | TATATTACTTTAATTGTATT+TGG | - | chr5_1:23842053-23842072 | Msa0724760:five_prime_UTR | 10.0% |
| !!! | GTTTTAAAAGAAAAATTTAA+TGG | - | chr5_1:23842789-23842808 | Msa0724760:five_prime_UTR | 10.0% |
| !! | TAAAGATCAAATAAATTATG+AGG | + | chr5_1:23841292-23841311 | None:intergenic | 15.0% |
| !! | ATACAAATTATAAACTCAAA+AGG | + | chr5_1:23841534-23841553 | None:intergenic | 15.0% |
| !!! | ATAGTTTGATAGTTTAAAAT+AGG | + | chr5_1:23841765-23841784 | None:intergenic | 15.0% |
| !! | ATATATTTATTTATTGCTAC+AGG | - | chr5_1:23841935-23841954 | Msa0724760:intron | 15.0% |
| !! | AAACAAAAAGTAAAGAAATT+TGG | - | chr5_1:23842176-23842195 | Msa0724760:intron | 15.0% |
| !! | AAACATAATAAAGAAAAGTG+AGG | + | chr5_1:23841891-23841910 | None:intergenic | 20.0% |
| !! | TACTTTAATTGTATTTGGTA+TGG | - | chr5_1:23842058-23842077 | Msa0724760:five_prime_UTR | 20.0% |
| !! | TCAATTCTTTCTTCTTGTTT+CGG | + | chr5_1:23840310-23840329 | None:intergenic | 25.0% |
| !!! | TTCCTTCTGCTTTAATTTTT+TGG | - | chr5_1:23840677-23840696 | Msa0724760:CDS | 25.0% |
| ! | AACCAAAAAATTAAAGCAGA+AGG | + | chr5_1:23840682-23840701 | None:intergenic | 25.0% |
| ! | ATCCACTGAAATAATGAAAA+GGG | + | chr5_1:23840711-23840730 | None:intergenic | 25.0% |
| ! | AATCCACTGAAATAATGAAA+AGG | + | chr5_1:23840712-23840731 | None:intergenic | 25.0% |
| !!! | TTGAGCTTTTAATTATTGAC+TGG | - | chr5_1:23841337-23841356 | Msa0724760:intron | 25.0% |
| ! | ACAGTGAGAAAACATAATTT+GGG | + | chr5_1:23841405-23841424 | None:intergenic | 25.0% |
| ! | TACAGTGAGAAAACATAATT+TGG | + | chr5_1:23841406-23841425 | None:intergenic | 25.0% |
| ! | TTATAATTAGCGAGTCAATT+GGG | + | chr5_1:23841448-23841467 | None:intergenic | 25.0% |
| ! | ATTATAATTAGCGAGTCAAT+TGG | + | chr5_1:23841449-23841468 | None:intergenic | 25.0% |
| ! | CTAATTATAATACAACCCTT+CGG | - | chr5_1:23841458-23841477 | Msa0724760:intron | 25.0% |
| ! | GATTCAAAACAGAATTATCA+AGG | - | chr5_1:23841576-23841595 | Msa0724760:CDS | 25.0% |
| ! | TCAGTTGAAAACAGAATAAT+CGG | - | chr5_1:23841641-23841660 | Msa0724760:five_prime_UTR | 25.0% |
| ! | TATTTATTTATTGCTACAGG+TGG | - | chr5_1:23841938-23841957 | Msa0724760:intron | 25.0% |
| !!! | GGATCATTTGTTTTAGAATA+AGG | - | chr5_1:23842153-23842172 | Msa0724760:intron | 25.0% |
| !!! | TTTTTGGTTGTGGTATTTTT+AGG | - | chr5_1:23842628-23842647 | Msa0724760:five_prime_UTR | 25.0% |
| !!! | TTTTGGTTGTGGTATTTTTA+GGG | - | chr5_1:23842629-23842648 | Msa0724760:five_prime_UTR | 25.0% |
| AAAAAACCAAGATGATCCTA+GGG | + | chr5_1:23839822-23839841 | None:intergenic | 30.0% | |
| AAAAAAACCAAGATGATCCT+AGG | + | chr5_1:23839823-23839842 | None:intergenic | 30.0% | |
| ! | AGTGTGATATCACATCATTT+TGG | + | chr5_1:23839870-23839889 | None:intergenic | 30.0% |
| TAGTTGTGTTTGTCTTGAAT+TGG | + | chr5_1:23839908-23839927 | None:intergenic | 30.0% | |
| AATTAGCCAATCAGATTTAG+AGG | - | chr5_1:23839944-23839963 | Msa0724760:three_prime_UTR | 30.0% | |
| ATTAGCCAATCAGATTTAGA+GGG | - | chr5_1:23839945-23839964 | Msa0724760:three_prime_UTR | 30.0% | |
| CAACAGCAAAATAAACCAAT+AGG | - | chr5_1:23840011-23840030 | Msa0724760:three_prime_UTR | 30.0% | |
| !!! | AGAAGTTCTGTTTTGATGTT+TGG | + | chr5_1:23840062-23840081 | None:intergenic | 30.0% |
| ACAGATAGAAACTGATAGAA+GGG | + | chr5_1:23840209-23840228 | None:intergenic | 30.0% | |
| GGGTTTACACTTATTAAACA+CGG | - | chr5_1:23840372-23840391 | Msa0724760:CDS | 30.0% | |
| ATCTTAACTCAGGAAAGAAA+AGG | + | chr5_1:23840482-23840501 | None:intergenic | 30.0% | |
| CTCAAAAATCATCTTAACTC+AGG | + | chr5_1:23840492-23840511 | None:intergenic | 30.0% | |
| TTGATTACCATGTGTTAATG+AGG | + | chr5_1:23840642-23840661 | None:intergenic | 30.0% | |
| ACATGGTAATCAATCTTTAC+AGG | - | chr5_1:23840649-23840668 | Msa0724760:CDS | 30.0% | |
| ! | TTCCCTTTTCATTATTTCAG+TGG | - | chr5_1:23840706-23840725 | Msa0724760:intron | 30.0% |
| AATGATAAATCAAAGCTTCC+AGG | + | chr5_1:23840742-23840761 | None:intergenic | 30.0% | |
| ACAGTTAGCTACAAATGTTT+CGG | - | chr5_1:23840790-23840809 | Msa0724760:intron | 30.0% | |
| GAATTTATTGAACCACGAAT+TGG | - | chr5_1:23840862-23840881 | Msa0724760:intron | 30.0% | |
| TGTAGGGTTTATTGTAAACA+AGG | - | chr5_1:23840929-23840948 | Msa0724760:intron | 30.0% | |
| TTGTTCCCAAACTGAAATAA+TGG | - | chr5_1:23840989-23841008 | Msa0724760:intron | 30.0% | |
| TCAAATAAATTATGAGGCAG+AGG | + | chr5_1:23841286-23841305 | None:intergenic | 30.0% | |
| !! | GCTTTTAATTATTGACTGGT+TGG | - | chr5_1:23841341-23841360 | Msa0724760:intron | 30.0% |
| AGTGAGAAAACATAATTTGG+GGG | + | chr5_1:23841403-23841422 | None:intergenic | 30.0% | |
| CAGTGAGAAAACATAATTTG+GGG | + | chr5_1:23841404-23841423 | None:intergenic | 30.0% | |
| !! | TTCTGTTTTGAATCAATCTG+AGG | + | chr5_1:23841570-23841589 | None:intergenic | 30.0% |
| AAAACAGAATTATCAAGGCA+TGG | - | chr5_1:23841581-23841600 | Msa0724760:CDS | 30.0% | |
| AACTGACATTATTCCACAAA+AGG | + | chr5_1:23841627-23841646 | None:intergenic | 30.0% | |
| !! | CTGTTTGGTGTTTAATACAT+TGG | + | chr5_1:23841819-23841838 | None:intergenic | 30.0% |
| ACTACACACTTACATTTACT+TGG | + | chr5_1:23842003-23842022 | None:intergenic | 30.0% | |
| GATTAACTGAACACAATACT+TGG | - | chr5_1:23842115-23842134 | Msa0724760:intron | 30.0% | |
| ACTTGGATTCTTTCTAACTT+TGG | - | chr5_1:23842132-23842151 | Msa0724760:intron | 30.0% | |
| TAAATCCTGATCATCTTGTA+TGG | + | chr5_1:23842317-23842336 | None:intergenic | 30.0% | |
| TCTCAATCTTCTAACAATCA+TGG | - | chr5_1:23842340-23842359 | Msa0724760:five_prime_UTR | 30.0% | |
| ATTTCAGTGTCTATTGTTTC+AGG | - | chr5_1:23842389-23842408 | Msa0724760:five_prime_UTR | 30.0% | |
| AGATTTCAAAGTCATAGCTT+TGG | - | chr5_1:23842598-23842617 | Msa0724760:five_prime_UTR | 30.0% | |
| !!! | TTTGGTTGTGGTATTTTTAG+GGG | - | chr5_1:23842630-23842649 | Msa0724760:five_prime_UTR | 30.0% |
| TATTGAGATGAGATGTTTCA+AGG | - | chr5_1:23842820-23842839 | Msa0724760:five_prime_UTR | 30.0% | |
| !!! | ATCATTTTGGCTCCAAAGAA+GGG | + | chr5_1:23839857-23839876 | None:intergenic | 35.0% |
| ! | AATCTGATTGGCTAATTGTG+TGG | + | chr5_1:23839941-23839960 | None:intergenic | 35.0% |
| TTTGCAAGTAACAACCAATC+AGG | - | chr5_1:23839968-23839987 | Msa0724760:three_prime_UTR | 35.0% | |
| TAACAACCAATCAGGTTTAG+AGG | - | chr5_1:23839976-23839995 | Msa0724760:three_prime_UTR | 35.0% | |
| AACAACCAATCAGGTTTAGA+GGG | - | chr5_1:23839977-23839996 | Msa0724760:three_prime_UTR | 35.0% | |
| ATGTTTGGAAAGATATCACG+TGG | + | chr5_1:23840047-23840066 | None:intergenic | 35.0% | |
| GACAGATAGAAACTGATAGA+AGG | + | chr5_1:23840210-23840229 | None:intergenic | 35.0% | |
| !! | TGAAAGAAAACTGTCGATTC+CGG | - | chr5_1:23840262-23840281 | Msa0724760:intron | 35.0% |
| ! | TCAATTTAGTTTCAACGCAG+TGG | - | chr5_1:23840529-23840548 | Msa0724760:intron | 35.0% |
| TTATTGAACCACGAATTGGA+TGG | - | chr5_1:23840866-23840885 | Msa0724760:intron | 35.0% | |
| CATCGCCATTATTTCAGTTT+GGG | + | chr5_1:23840997-23841016 | None:intergenic | 35.0% | |
| TCTATCTGTGTTGTGCATAA+AGG | + | chr5_1:23841136-23841155 | None:intergenic | 35.0% | |
| CCAGTTGTATTGTCATGTAA+TGG | + | chr5_1:23841162-23841181 | None:intergenic | 35.0% | |
| CCATTACATGACAATACAAC+TGG | - | chr5_1:23841159-23841178 | Msa0724760:intron | 35.0% | |
| CTTCTGTCTTTGCATTCAAA+CGG | - | chr5_1:23841190-23841209 | Msa0724760:intron | 35.0% | |
| GTGAGAAAACATAATTTGGG+GGG | + | chr5_1:23841402-23841421 | None:intergenic | 35.0% | |
| ! | TGGGAAGTACAACAAATAGA+TGG | + | chr5_1:23841429-23841448 | None:intergenic | 35.0% |
| TCTAATGACTTCTTGCAAAG+AGG | + | chr5_1:23841508-23841527 | None:intergenic | 35.0% | |
| ! | TCATGTAACTTTGCCTTTTG+TGG | - | chr5_1:23841611-23841630 | Msa0724760:CDS | 35.0% |
| CATTTGCTTGTGTAAAACTG+TGG | - | chr5_1:23841863-23841882 | Msa0724760:intron | 35.0% | |
| GGTAGAATAAGATTGTACAG+TGG | - | chr5_1:23842079-23842098 | Msa0724760:five_prime_UTR | 35.0% | |
| ATTGTACAGTGGCAGTTATA+AGG | - | chr5_1:23842090-23842109 | Msa0724760:intron | 35.0% | |
| TTGTACAGTGGCAGTTATAA+GGG | - | chr5_1:23842091-23842110 | Msa0724760:intron | 35.0% | |
| CCAAGGGATGAAAATTGAAT+CGG | + | chr5_1:23842229-23842248 | None:intergenic | 35.0% | |
| ATACCACAACCAAAAAAGCA+TGG | + | chr5_1:23842624-23842643 | None:intergenic | 35.0% | |
| TTACAGAAATGCCCCTTCTT+TGG | - | chr5_1:23839842-23839861 | Msa0724760:three_prime_UTR | 40.0% | |
| !!! | TCATTTTGGCTCCAAAGAAG+GGG | + | chr5_1:23839856-23839875 | None:intergenic | 40.0% |
| !!! | CATCATTTTGGCTCCAAAGA+AGG | + | chr5_1:23839858-23839877 | None:intergenic | 40.0% |
| GCAAACCCTCTAAATCTGAT+TGG | + | chr5_1:23839953-23839972 | None:intergenic | 40.0% | |
| ! | AACTGATAGAAGGGTGTAGA+TGG | + | chr5_1:23840200-23840219 | None:intergenic | 40.0% |
| AGTTTCTATCTGTCTCAGAG+AGG | - | chr5_1:23840216-23840235 | Msa0724760:CDS | 40.0% | |
| AGGTGAAGATAGACTTCGAT+CGG | - | chr5_1:23840236-23840255 | Msa0724760:intron | 40.0% | |
| ATCAAACAGACATGACAGTG+AGG | - | chr5_1:23840346-23840365 | Msa0724760:CDS | 40.0% | |
| !! | TTCAGTGGATTGATTCATCC+TGG | - | chr5_1:23840721-23840740 | Msa0724760:intron | 40.0% |
| AGCGAAGATGAAGATGAAGA+AGG | - | chr5_1:23840822-23840841 | Msa0724760:intron | 40.0% | |
| ACTAAAAGGATGACAGGTGT+AGG | - | chr5_1:23840912-23840931 | Msa0724760:intron | 40.0% | |
| CTAAAAGGATGACAGGTGTA+GGG | - | chr5_1:23840913-23840932 | Msa0724760:intron | 40.0% | |
| CCATCGCCATTATTTCAGTT+TGG | + | chr5_1:23840998-23841017 | None:intergenic | 40.0% | |
| CCAAACTGAAATAATGGCGA+TGG | - | chr5_1:23840995-23841014 | Msa0724760:intron | 40.0% | |
| CGAATGCTTGTTCTCTTCAA+CGG | + | chr5_1:23841072-23841091 | None:intergenic | 40.0% | |
| GAAGAGAACAAGCATTCGAA+TGG | - | chr5_1:23841074-23841093 | Msa0724760:intron | 40.0% | |
| GATGAAGCGAGCATTCAATA+TGG | - | chr5_1:23841096-23841115 | Msa0724760:intron | 40.0% | |
| TCTGTGTTGTGCATAAAGGA+AGG | + | chr5_1:23841132-23841151 | None:intergenic | 40.0% | |
| CGTTTGAATGCAAAGACAGA+AGG | + | chr5_1:23841192-23841211 | None:intergenic | 40.0% | |
| ACTGCATCATCATATGTGTG+TGG | + | chr5_1:23841251-23841270 | None:intergenic | 40.0% | |
| GAAAACATAATTTGGGGGGT+GGG | + | chr5_1:23841398-23841417 | None:intergenic | 40.0% | |
| AGAAAACATAATTTGGGGGG+TGG | + | chr5_1:23841399-23841418 | None:intergenic | 40.0% | |
| ! | CAATCTGAGGCACAAAAGAA+AGG | + | chr5_1:23841557-23841576 | None:intergenic | 40.0% |
| ! | CTGACATTGAATCTAGCTTG+AGG | + | chr5_1:23841668-23841687 | None:intergenic | 40.0% |
| CTCAAGCTAGATTCAATGTC+AGG | - | chr5_1:23841666-23841685 | Msa0724760:five_prime_UTR | 40.0% | |
| AATGTCAGGTAGATTTCACG+AGG | - | chr5_1:23841680-23841699 | Msa0724760:five_prime_UTR | 40.0% | |
| CAAGATGACACAATTGGTAG+TGG | + | chr5_1:23841791-23841810 | None:intergenic | 40.0% | |
| CACTACCAATTGTGTCATCT+TGG | - | chr5_1:23841789-23841808 | Msa0724760:five_prime_UTR | 40.0% | |
| ! | GCTTAAAGTCATGTGCTGTT+TGG | + | chr5_1:23841834-23841853 | None:intergenic | 40.0% |
| ! | CCGATTCAATTTTCATCCCT+TGG | - | chr5_1:23842226-23842245 | Msa0724760:intron | 40.0% |
| !! | TCCGGTTTTGTCTTTTCTTG+AGG | - | chr5_1:23842258-23842277 | Msa0724760:intron | 40.0% |
| GCCTCAAGAAAAGACAAAAC+CGG | + | chr5_1:23842262-23842281 | None:intergenic | 40.0% | |
| ! | TCTTTTCTTGAGGCTCTTGA+GGG | - | chr5_1:23842268-23842287 | Msa0724760:five_prime_UTR | 40.0% |
| TGTCTATTGTTTCAGGCTGT+TGG | - | chr5_1:23842396-23842415 | Msa0724760:five_prime_UTR | 40.0% | |
| TTGCTTGGAGTCATTGTTTG+TGG | - | chr5_1:23842521-23842540 | Msa0724760:five_prime_UTR | 40.0% | |
| TTGGAGTCATTGTTTGTGGA+CGG | - | chr5_1:23842525-23842544 | Msa0724760:five_prime_UTR | 40.0% | |
| ! | TCAGCTATGGACTTGGATTT+TGG | - | chr5_1:23842565-23842584 | Msa0724760:five_prime_UTR | 40.0% |
| !!! | TAGCTTTGGCCATGCTTTTT+TGG | - | chr5_1:23842612-23842631 | Msa0724760:five_prime_UTR | 40.0% |
| CACCTTATCCAACACGAATA+TGG | + | chr5_1:23842664-23842683 | None:intergenic | 40.0% | |
| ! | AAGGTGACGTAGTTGTGTTT+TGG | - | chr5_1:23842678-23842697 | Msa0724760:five_prime_UTR | 40.0% |
| ! | AGGTGACGTAGTTGTGTTTT+GGG | - | chr5_1:23842679-23842698 | Msa0724760:five_prime_UTR | 40.0% |
| CAATACAAAATGCCGCCTAT+AGG | + | chr5_1:23842716-23842735 | None:intergenic | 40.0% | |
| ATGATCCTAGGGTTTGGCTA+GGG | + | chr5_1:23839811-23839830 | None:intergenic | 45.0% | |
| ACCAAGATGATCCTAGGGTT+TGG | + | chr5_1:23839817-23839836 | None:intergenic | 45.0% | |
| ATCACACTACTGAAAGCAGC+TGG | - | chr5_1:23839882-23839901 | Msa0724760:three_prime_UTR | 45.0% | |
| GCAAACCCTCTAAACCTGAT+TGG | + | chr5_1:23839985-23840004 | None:intergenic | 45.0% | |
| CGTGGAGCAAGATATCCTAT+TGG | + | chr5_1:23840029-23840048 | None:intergenic | 45.0% | |
| ! | TGATAGAAGGGTGTAGATGG+TGG | + | chr5_1:23840197-23840216 | None:intergenic | 45.0% |
| !! | AAGAAAACTGTCGATTCCGG+CGG | - | chr5_1:23840265-23840284 | Msa0724760:intron | 45.0% |
| ACAGACATGACAGTGAGGTT+AGG | - | chr5_1:23840351-23840370 | Msa0724760:CDS | 45.0% | |
| CAGACATGACAGTGAGGTTA+GGG | - | chr5_1:23840352-23840371 | Msa0724760:CDS | 45.0% | |
| AAACACGGTGAGTCTAGACA+CGG | - | chr5_1:23840387-23840406 | Msa0724760:CDS | 45.0% | |
| GATCGCAGTTCTGCTAAAAG+CGG | - | chr5_1:23840425-23840444 | Msa0724760:CDS | 45.0% | |
| !! | AAAGCGGCAGCAATTTGCTA+AGG | - | chr5_1:23840441-23840460 | Msa0724760:CDS | 45.0% |
| GTCTCAGCCTCATTAACACA+TGG | - | chr5_1:23840632-23840651 | Msa0724760:intron | 45.0% | |
| TCTTCGATCCATCCAATTCG+TGG | + | chr5_1:23840877-23840896 | None:intergenic | 45.0% | |
| CAGGTGACTAAAAGGATGAC+AGG | - | chr5_1:23840906-23840925 | Msa0724760:intron | 45.0% | |
| GAAGCGAGCATTCAATATGG+TGG | - | chr5_1:23841099-23841118 | Msa0724760:intron | 45.0% | |
| ! | TACAACCCTTCGGTTTGAGA+TGG | - | chr5_1:23841468-23841487 | Msa0724760:intron | 45.0% |
| ! | GTTTGAGATGGTGCACTAGA+CGG | - | chr5_1:23841480-23841499 | Msa0724760:CDS | 45.0% |
| GCTGACCAAGATGACACAAT+TGG | + | chr5_1:23841797-23841816 | None:intergenic | 45.0% | |
| ATCCCTTGGCAAACAAGTTC+CGG | - | chr5_1:23842240-23842259 | Msa0724760:intron | 45.0% | |
| ! | AACCGGAACTTGTTTGCCAA+GGG | + | chr5_1:23842245-23842264 | None:intergenic | 45.0% |
| ! | AAACCGGAACTTGTTTGCCA+AGG | + | chr5_1:23842246-23842265 | None:intergenic | 45.0% |
| ! | GTCTTTTCTTGAGGCTCTTG+AGG | - | chr5_1:23842267-23842286 | Msa0724760:five_prime_UTR | 45.0% |
| TTGTATGGACTCCTCAGACT+TGG | + | chr5_1:23842302-23842321 | None:intergenic | 45.0% | |
| GGAGTCCATACAAGATGATC+AGG | - | chr5_1:23842309-23842328 | Msa0724760:five_prime_UTR | 45.0% | |
| ! | ATTGTTTCAGGCTGTTGGCT+CGG | - | chr5_1:23842401-23842420 | Msa0724760:five_prime_UTR | 45.0% |
| !!! | TTTTGGGCCTGTTTTAGCTG+TGG | - | chr5_1:23842488-23842507 | Msa0724760:five_prime_UTR | 45.0% |
| !!! | TGGCCATGCTTTTTTGGTTG+TGG | - | chr5_1:23842618-23842637 | Msa0724760:five_prime_UTR | 45.0% |
| CTACTTCGCCATATTCGTGT+TGG | - | chr5_1:23842653-23842672 | Msa0724760:five_prime_UTR | 45.0% | |
| CGCCATATTCGTGTTGGATA+AGG | - | chr5_1:23842659-23842678 | Msa0724760:five_prime_UTR | 45.0% | |
| !! | TGACGTAGTTGTGTTTTGGG+TGG | - | chr5_1:23842682-23842701 | Msa0724760:five_prime_UTR | 45.0% |
| GATGATCCTAGGGTTTGGCT+AGG | + | chr5_1:23839812-23839831 | None:intergenic | 50.0% | |
| GCCAAACCCTAGGATCATCT+TGG | - | chr5_1:23839813-23839832 | Msa0724760:three_prime_UTR | 50.0% | |
| ! | AGAAGGGTGTAGATGGTGGT+GGG | + | chr5_1:23840193-23840212 | None:intergenic | 50.0% |
| ! | TAGAAGGGTGTAGATGGTGG+TGG | + | chr5_1:23840194-23840213 | None:intergenic | 50.0% |
| CAGAACTGCGATCAGAGCAA+CGG | + | chr5_1:23840418-23840437 | None:intergenic | 50.0% | |
| GCAACAGTGAGAGGAGATTG+CGG | - | chr5_1:23840556-23840575 | Msa0724760:intron | 50.0% | |
| AGGGAATCGGGTGGAGTTAA+CGG | - | chr5_1:23840589-23840608 | Msa0724760:intron | 50.0% | |
| AATCGGGTGGAGTTAACGGA+GGG | - | chr5_1:23840593-23840612 | Msa0724760:intron | 50.0% | |
| TGGAGTTAACGGAGGGAGAT+AGG | - | chr5_1:23840600-23840619 | Msa0724760:intron | 50.0% | |
| GGAGTTAACGGAGGGAGATA+GGG | - | chr5_1:23840601-23840620 | Msa0724760:intron | 50.0% | |
| GGATGGATCGAAGACTGTAG+CGG | - | chr5_1:23840883-23840902 | Msa0724760:intron | 50.0% | |
| TGTAGCGGCAGGTGACTAAA+AGG | - | chr5_1:23840898-23840917 | Msa0724760:intron | 50.0% | |
| GCGAGCATTCAATATGGTGG+AGG | - | chr5_1:23841102-23841121 | Msa0724760:intron | 50.0% | |
| GTGCACCATCTCAAACCGAA+GGG | + | chr5_1:23841476-23841495 | None:intergenic | 50.0% | |
| AGTGCACCATCTCAAACCGA+AGG | + | chr5_1:23841477-23841496 | None:intergenic | 50.0% | |
| GGGTTCTGTTTCCAAGTCTG+AGG | - | chr5_1:23842288-23842307 | Msa0724760:five_prime_UTR | 50.0% | |
| TCATTGTTTGTGGACGGCTG+TGG | - | chr5_1:23842531-23842550 | Msa0724760:five_prime_UTR | 50.0% | |
| CATTGTTTGTGGACGGCTGT+GGG | - | chr5_1:23842532-23842551 | Msa0724760:five_prime_UTR | 50.0% | |
| TAGTGGCTCAGCTATGGACT+TGG | - | chr5_1:23842558-23842577 | Msa0724760:five_prime_UTR | 50.0% | |
| TGGGTGGATGTTACGCCTAT+AGG | - | chr5_1:23842698-23842717 | Msa0724760:five_prime_UTR | 50.0% | |
| GTGGATGTTACGCCTATAGG+CGG | - | chr5_1:23842701-23842720 | Msa0724760:five_prime_UTR | 50.0% | |
| CCTAGGGTTTGGCTAGGGTT+TGG | + | chr5_1:23839806-23839825 | None:intergenic | 55.0% | |
| CCAAACCCTAGCCAAACCCT+AGG | - | chr5_1:23839803-23839822 | Msa0724760:three_prime_UTR | 55.0% | |
| ! | TAACAGGGACGGTGGTGGTA+GGG | + | chr5_1:23840123-23840142 | None:intergenic | 55.0% |
| ! | ATAACAGGGACGGTGGTGGT+AGG | + | chr5_1:23840124-23840143 | None:intergenic | 55.0% |
| GAAAGGGGAGAAGGAAGGAG+AGG | + | chr5_1:23840160-23840179 | None:intergenic | 55.0% | |
| CTCACGAAAGGGGAGAAGGA+AGG | + | chr5_1:23840165-23840184 | None:intergenic | 55.0% | |
| CTTCCTTCTCCCCTTTCGTG+AGG | - | chr5_1:23840163-23840182 | Msa0724760:CDS | 55.0% | |
| ! | GAAGGGTGTAGATGGTGGTG+GGG | + | chr5_1:23840192-23840211 | None:intergenic | 55.0% |
| !! | AAAACTGTCGATTCCGGCGG+TGG | - | chr5_1:23840268-23840287 | Msa0724760:intron | 55.0% |
| AGTGGCAACGCAACAGTGAG+AGG | - | chr5_1:23840547-23840566 | Msa0724760:intron | 55.0% | |
| ACAGTGAGAGGAGATTGCGG+TGG | - | chr5_1:23840559-23840578 | Msa0724760:intron | 55.0% | |
| ! | AGATTGCGGTGGTGGTGAGA+GGG | - | chr5_1:23840570-23840589 | Msa0724760:intron | 55.0% |
| GAATCGGGTGGAGTTAACGG+AGG | - | chr5_1:23840592-23840611 | Msa0724760:intron | 55.0% | |
| !!! | CAGGCTGTTGGCTCGGTTTT+AGG | - | chr5_1:23842408-23842427 | Msa0724760:five_prime_UTR | 55.0% |
| !!! | CTCGGTTTTAGGCTGCTGTC+AGG | - | chr5_1:23842419-23842438 | Msa0724760:five_prime_UTR | 55.0% |
| ! | CCTGCTGCGCAGTGGTTTTT+GGG | - | chr5_1:23842472-23842491 | Msa0724760:five_prime_UTR | 55.0% |
| GCAGCTGCCACAGCTAAAAC+AGG | + | chr5_1:23842498-23842517 | None:intergenic | 55.0% | |
| ! | TGTGGCAGCTGCTGTTTGCT+TGG | - | chr5_1:23842506-23842525 | Msa0724760:five_prime_UTR | 55.0% |
| TGGTGGTAGGGGGAGAACAG+GGG | + | chr5_1:23840111-23840130 | None:intergenic | 60.0% | |
| GTGGTGGTAGGGGGAGAACA+GGG | + | chr5_1:23840112-23840131 | None:intergenic | 60.0% | |
| ! | AACAGGGACGGTGGTGGTAG+GGG | + | chr5_1:23840122-23840141 | None:intergenic | 60.0% |
| CCACCACCGTCCCTGTTATC+CGG | - | chr5_1:23840125-23840144 | Msa0724760:CDS | 60.0% | |
| ! | GAAGGAAGGAGAGGTGGTGG+CGG | + | chr5_1:23840151-23840170 | None:intergenic | 60.0% |
| GGAGAAGGAAGGAGAGGTGG+TGG | + | chr5_1:23840154-23840173 | None:intergenic | 60.0% | |
| AGGGGAGAAGGAAGGAGAGG+TGG | + | chr5_1:23840157-23840176 | None:intergenic | 60.0% | |
| TGGCCTCACGAAAGGGGAGA+AGG | + | chr5_1:23840169-23840188 | None:intergenic | 60.0% | |
| CACGGTGAGTCTAGACACGG+CGG | - | chr5_1:23840390-23840409 | Msa0724760:CDS | 60.0% | |
| GTGAGAGGAGATTGCGGTGG+TGG | - | chr5_1:23840562-23840581 | Msa0724760:intron | 60.0% | |
| ! | GAGATTGCGGTGGTGGTGAG+AGG | - | chr5_1:23840569-23840588 | Msa0724760:intron | 60.0% |
| ! | CGGTGGTGGTGAGAGGGAAT+CGG | - | chr5_1:23840576-23840595 | Msa0724760:intron | 60.0% |
| ! | GGTGGTGGTGAGAGGGAATC+GGG | - | chr5_1:23840577-23840596 | Msa0724760:intron | 60.0% |
| GGATCGAAGACTGTAGCGGC+AGG | - | chr5_1:23840887-23840906 | Msa0724760:intron | 60.0% | |
| CGGTCGCTTGCACGATGCTA+TGG | + | chr5_1:23841052-23841071 | None:intergenic | 60.0% | |
| ! | TGTTTCTGCCTGCTGCGCAG+TGG | - | chr5_1:23842464-23842483 | Msa0724760:five_prime_UTR | 60.0% |
| ! | GCCTGCTGCGCAGTGGTTTT+TGG | - | chr5_1:23842471-23842490 | Msa0724760:five_prime_UTR | 60.0% |
| CCCAAAAACCACTGCGCAGC+AGG | + | chr5_1:23842475-23842494 | None:intergenic | 60.0% | |
| TGTTTGTGGACGGCTGTGGG+AGG | - | chr5_1:23842535-23842554 | Msa0724760:five_prime_UTR | 60.0% | |
| ! | GGGAGGTAGTGGCTCAGCTA+TGG | - | chr5_1:23842552-23842571 | Msa0724760:five_prime_UTR | 60.0% |
| ! | GGTGGTGGTAGGGGGAGAAC+AGG | + | chr5_1:23840113-23840132 | None:intergenic | 65.0% |
| ! | ACAGGGACGGTGGTGGTAGG+GGG | + | chr5_1:23840121-23840140 | None:intergenic | 65.0% |
| CCGGATAACAGGGACGGTGG+TGG | + | chr5_1:23840128-23840147 | None:intergenic | 65.0% | |
| TGGCGGCCGGATAACAGGGA+CGG | + | chr5_1:23840134-23840153 | None:intergenic | 65.0% | |
| !! | GTGGTGGCGGCCGGATAACA+GGG | + | chr5_1:23840138-23840157 | None:intergenic | 65.0% |
| GTGGGGTGGCCTCACGAAAG+GGG | + | chr5_1:23840175-23840194 | None:intergenic | 65.0% | |
| GGTGGGGTGGCCTCACGAAA+GGG | + | chr5_1:23840176-23840195 | None:intergenic | 65.0% | |
| TGGTGGGGTGGCCTCACGAA+AGG | + | chr5_1:23840177-23840196 | None:intergenic | 65.0% | |
| !! | GGGTGTAGATGGTGGTGGGG+TGG | + | chr5_1:23840189-23840208 | None:intergenic | 65.0% |
| GGTGGTGAGAGGGAATCGGG+TGG | - | chr5_1:23840580-23840599 | Msa0724760:intron | 65.0% | |
| TGGACGGCTGTGGGAGGTAG+TGG | - | chr5_1:23842541-23842560 | Msa0724760:five_prime_UTR | 65.0% | |
| CGGCCGGATAACAGGGACGG+TGG | + | chr5_1:23840131-23840150 | None:intergenic | 70.0% | |
| !! | GGTGGTGGCGGCCGGATAAC+AGG | + | chr5_1:23840139-23840158 | None:intergenic | 70.0% |
| !! | GAAGGAGAGGTGGTGGCGGC+CGG | + | chr5_1:23840147-23840166 | None:intergenic | 70.0% |
| ! | GTCGATTCCGGCGGTGGCAG+CGG | - | chr5_1:23840274-23840293 | Msa0724760:intron | 70.0% |
| TCCTCGTCCGCTGCCACCGC+CGG | + | chr5_1:23840284-23840303 | None:intergenic | 75.0% | |
| ! | TCCGGCGGTGGCAGCGGACG+AGG | - | chr5_1:23840280-23840299 | Msa0724760:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 23839774 | 23842882 | 23839774 | ID=Msa0724760;Name=Msa0724760 |
| chr5_1 | mRNA | 23839774 | 23842882 | 23839774 | ID=Msa0724760-mRNA-1;Parent=Msa0724760;Name=Msa0724760-mRNA-1;_AED=0.10;_eAED=0.10;_QI=966|0.66|0.71|1|0.33|0.42|7|322|189 |
| chr5_1 | exon | 23839774 | 23840245 | 23839774 | ID=Msa0724760-mRNA-1:exon:8789;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23840253 | 23840260 | 23840253 | ID=Msa0724760-mRNA-1:exon:8788;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23840292 | 23840487 | 23840292 | ID=Msa0724760-mRNA-1:exon:8787;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23840647 | 23840699 | 23840647 | ID=Msa0724760-mRNA-1:exon:8786;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23841476 | 23841862 | 23841476 | ID=Msa0724760-mRNA-1:exon:8785;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23841986 | 23842107 | 23841986 | ID=Msa0724760-mRNA-1:exon:8784;Parent=Msa0724760-mRNA-1 |
| chr5_1 | exon | 23842263 | 23842882 | 23842263 | ID=Msa0724760-mRNA-1:exon:8783;Parent=Msa0724760-mRNA-1 |
| chr5_1 | five_prime_UTR | 23842263 | 23842882 | 23842263 | ID=Msa0724760-mRNA-1:five_prime_utr;Parent=Msa0724760-mRNA-1 |
| chr5_1 | five_prime_UTR | 23841986 | 23842107 | 23841986 | ID=Msa0724760-mRNA-1:five_prime_utr;Parent=Msa0724760-mRNA-1 |
| chr5_1 | five_prime_UTR | 23841639 | 23841862 | 23841639 | ID=Msa0724760-mRNA-1:five_prime_utr;Parent=Msa0724760-mRNA-1 |
| chr5_1 | CDS | 23841476 | 23841638 | 23841476 | ID=Msa0724760-mRNA-1:cds;Parent=Msa0724760-mRNA-1 |
| chr5_1 | CDS | 23840647 | 23840699 | 23840647 | ID=Msa0724760-mRNA-1:cds;Parent=Msa0724760-mRNA-1 |
| chr5_1 | CDS | 23840292 | 23840487 | 23840292 | ID=Msa0724760-mRNA-1:cds;Parent=Msa0724760-mRNA-1 |
| chr5_1 | CDS | 23840253 | 23840260 | 23840253 | ID=Msa0724760-mRNA-1:cds;Parent=Msa0724760-mRNA-1 |
| chr5_1 | CDS | 23840096 | 23840245 | 23840096 | ID=Msa0724760-mRNA-1:cds;Parent=Msa0724760-mRNA-1 |
| chr5_1 | three_prime_UTR | 23839774 | 23840095 | 23839774 | ID=Msa0724760-mRNA-1:three_prime_utr;Parent=Msa0724760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
