AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1010720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 152 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCACTTGCAGCATTATTAT+TGG 0.236001 7_1:+13903242 None:intergenic
GCACTTGCAGCATTATTATT+GGG 0.245529 7_1:+13903243 None:intergenic
TTACAGAAATGCCCCTTCTT+TGG 0.261089 7_1:-13902814 Msa1010720:five_prime_UTR
GGTGGTGGCGGCCGGATAAC+AGG 0.269132 7_1:+13902520 None:intergenic
ATAAGCACTTGCAGCATTAT+TGG 0.278791 7_1:+13903167 None:intergenic
TCAATTCTTTCTTCTTGTTT+CGG 0.280053 7_1:+13902349 None:intergenic
TAAGCACTTGCAGCATTATT+GGG 0.287353 7_1:+13903168 None:intergenic
CACCTTATCCAACACGAATA+TGG 0.294160 7_1:+13899995 None:intergenic
GGGGAAGAAAAGAAAGAAAA+TGG 0.307856 7_1:+13903188 None:intergenic
ACATGGTAATCAATCTTTAC+AGG 0.316120 7_1:-13902007 Msa1010720:intron
CCTAGGGTTTGGCTAGGGTT+TGG 0.322311 7_1:+13902853 None:intergenic
GTTCATTGAATTCCAACTTC+AGG 0.335374 7_1:+13903010 None:intergenic
GGAGAAGGAAGGAGAGGTGG+TGG 0.338181 7_1:+13902505 None:intergenic
TGGAGTTAACGGAGGGAGAT+AGG 0.346395 7_1:-13902056 Msa1010720:five_prime_UTR
AATTAGCCAATCAGATTTAG+AGG 0.348061 7_1:-13902712 Msa1010720:five_prime_UTR
CGCCATATTCGTGTTGGATA+AGG 0.355732 7_1:-13899997 Msa1010720:CDS
GGGGAAGAAAAGAAAGAATT+GGG 0.358334 7_1:+13903263 None:intergenic
TGGGGAAGAAAAGAAAGAAT+TGG 0.358696 7_1:+13903262 None:intergenic
AACTGATAGAAGGGTGTAGA+TGG 0.360633 7_1:+13902459 None:intergenic
GAATTTATTGAACCACGAAT+TGG 0.362261 7_1:-13901794 Msa1010720:five_prime_UTR
CGGTGGTGGTGAGAGGGAAT+CGG 0.367793 7_1:-13902080 Msa1010720:five_prime_UTR
AACAGGGACGGTGGTGGTAG+GGG 0.370468 7_1:+13902537 None:intergenic
TGTAGCGGCAGGTGACTAAA+AGG 0.370894 7_1:-13901758 Msa1010720:five_prime_UTR
TGAAAGAAAACTGTCGATTC+CGG 0.380091 7_1:-13902394 Msa1010720:five_prime_UTR
TTTAGATTTGACAGTGACTT+TGG 0.380669 7_1:+13903046 None:intergenic
TAACAACCAATCAGGTTTAG+AGG 0.381706 7_1:-13902680 Msa1010720:five_prime_UTR
GACAGATAGAAACTGATAGA+AGG 0.385902 7_1:+13902449 None:intergenic
GACATGAATTTGGATATGTT+TGG 0.386220 7_1:+13903116 None:intergenic
TCCTCGTCCGCTGCCACCGC+CGG 0.389280 7_1:+13902375 None:intergenic
ATCCCTTGGCAAACAAGTTC+CGG 0.394223 7_1:-13900416 Msa1010720:CDS
AGGGAATCGGGTGGAGTTAA+CGG 0.397949 7_1:-13902067 Msa1010720:five_prime_UTR
ACTACACACTTACATTTACT+TGG 0.404350 7_1:+13900656 None:intergenic
ACAGACATGACAGTGAGGTT+AGG 0.415868 7_1:-13902305 Msa1010720:five_prime_UTR
GAAGGAGAGGTGGTGGCGGC+CGG 0.416526 7_1:+13902512 None:intergenic
CAGACATGACAGTGAGGTTA+GGG 0.418002 7_1:-13902304 Msa1010720:five_prime_UTR
GTCGATTCCGGCGGTGGCAG+CGG 0.420451 7_1:-13902382 Msa1010720:five_prime_UTR
TTGTAACACAATTACTTGAC+TGG 0.420504 7_1:-13903076 Msa1010720:five_prime_UTR
TCCGGCGGTGGCAGCGGACG+AGG 0.423398 7_1:-13902376 Msa1010720:five_prime_UTR
GGTGGGGTGGCCTCACGAAA+GGG 0.427675 7_1:+13902483 None:intergenic
TTTGCAAGTAACAACCAATC+AGG 0.428775 7_1:-13902688 Msa1010720:five_prime_UTR
AGTGTGATATCACATCATTT+TGG 0.429284 7_1:+13902789 None:intergenic
TAGTTGTGTTTGTCTTGAAT+TGG 0.429851 7_1:+13902751 None:intergenic
TGTGGCAGCTGCTGTTTGCT+TGG 0.434687 7_1:-13900150 Msa1010720:CDS
ACCAAGATGATCCTAGGGTT+TGG 0.437500 7_1:+13902842 None:intergenic
CCATTACATGACAATACAAC+TGG 0.444073 7_1:-13901497 Msa1010720:intron
CAACAGCAAAATAAACCAAT+AGG 0.444143 7_1:-13902645 Msa1010720:five_prime_UTR
TAAATCCTGATCATCTTGTA+TGG 0.445839 7_1:+13900342 None:intergenic
ACAGGGACGGTGGTGGTAGG+GGG 0.447718 7_1:+13902538 None:intergenic
CCACCACCGTCCCTGTTATC+CGG 0.450002 7_1:-13902531 Msa1010720:five_prime_UTR
TTAGATTTGACAGTGACTTT+GGG 0.450932 7_1:+13903047 None:intergenic
GGTGGTGGTGAGAGGGAATC+GGG 0.451690 7_1:-13902079 Msa1010720:five_prime_UTR
GTGGGGTGGCCTCACGAAAG+GGG 0.454471 7_1:+13902484 None:intergenic
GCAAACCCTCTAAACCTGAT+TGG 0.455963 7_1:+13902674 None:intergenic
TAACAGGGACGGTGGTGGTA+GGG 0.456102 7_1:+13902536 None:intergenic
TTGCTTGGAGTCATTGTTTG+TGG 0.456662 7_1:-13900135 Msa1010720:CDS
TCTATCTGTGTTGTGCATAA+AGG 0.457460 7_1:+13901523 None:intergenic
CGTGGAGCAAGATATCCTAT+TGG 0.459264 7_1:+13902630 None:intergenic
CCAGTTGTATTGTCATGTAA+TGG 0.460265 7_1:+13901497 None:intergenic
GATGAAGCGAGCATTCAATA+TGG 0.460356 7_1:-13901560 Msa1010720:CDS
ACAGTTAGCTACAAATGTTT+CGG 0.466433 7_1:-13901866 Msa1010720:intron
AAAGCTCAAAATCCTGAAGT+TGG 0.468480 7_1:-13903022 Msa1010720:five_prime_UTR
GGAGTCCATACAAGATGATC+AGG 0.470741 7_1:-13900347 Msa1010720:CDS
CCAAGGGATGAAAATTGAAT+CGG 0.474238 7_1:+13900430 None:intergenic
GCAGCTGCCACAGCTAAAAC+AGG 0.475173 7_1:+13900161 None:intergenic
GAGATTGCGGTGGTGGTGAG+AGG 0.479011 7_1:-13902087 Msa1010720:five_prime_UTR
ATAACAGGGACGGTGGTGGT+AGG 0.481221 7_1:+13902535 None:intergenic
GCCTCAAGAAAAGACAAAAC+CGG 0.481492 7_1:+13900397 None:intergenic
GCCAAACCCTAGGATCATCT+TGG 0.484423 7_1:-13902843 Msa1010720:five_prime_UTR
CGAATGCTTGTTCTCTTCAA+CGG 0.486683 7_1:+13901587 None:intergenic
TAGAAGGGTGTAGATGGTGG+TGG 0.487186 7_1:+13902465 None:intergenic
TGGTGGGGTGGCCTCACGAA+AGG 0.488038 7_1:+13902482 None:intergenic
GCAAACCCTCTAAATCTGAT+TGG 0.490797 7_1:+13902706 None:intergenic
TCTCAATCTTCTAACAATCA+TGG 0.491896 7_1:-13900316 Msa1010720:CDS
AGGGGAGAAGGAAGGAGAGG+TGG 0.492140 7_1:+13902502 None:intergenic
GGGTGTAGATGGTGGTGGGG+TGG 0.495602 7_1:+13902470 None:intergenic
TCTTCGATCCATCCAATTCG+TGG 0.502069 7_1:+13901782 None:intergenic
AAAACTGTCGATTCCGGCGG+TGG 0.502588 7_1:-13902388 Msa1010720:five_prime_UTR
CTACTTCGCCATATTCGTGT+TGG 0.515336 7_1:-13900003 Msa1010720:CDS
GAAGGAAGGAGAGGTGGTGG+CGG 0.517801 7_1:+13902508 None:intergenic
TGAAGCTTTCCTAGCTCCAT+TGG 0.520574 7_1:+13902973 None:intergenic
GTGAGAGGAGATTGCGGTGG+TGG 0.521700 7_1:-13902094 Msa1010720:five_prime_UTR
GGGTTCTGTTTCCAAGTCTG+AGG 0.521871 7_1:-13900368 Msa1010720:CDS
GGAGTTAACGGAGGGAGATA+GGG 0.522842 7_1:-13902055 Msa1010720:five_prime_UTR
TCATTGTTTGTGGACGGCTG+TGG 0.523974 7_1:-13900125 Msa1010720:CDS
AGAAGGGTGTAGATGGTGGT+GGG 0.524240 7_1:+13902466 None:intergenic
CCGGATAACAGGGACGGTGG+TGG 0.527395 7_1:+13902531 None:intergenic
TGGCCTCACGAAAGGGGAGA+AGG 0.527728 7_1:+13902490 None:intergenic
ATCTTAACTCAGGAAAGAAA+AGG 0.529640 7_1:+13902177 None:intergenic
AACAACCAATCAGGTTTAGA+GGG 0.532548 7_1:-13902679 Msa1010720:five_prime_UTR
CATTGTTTGTGGACGGCTGT+GGG 0.540531 7_1:-13900124 Msa1010720:CDS
GTGGTGGCGGCCGGATAACA+GGG 0.541415 7_1:+13902521 None:intergenic
CAGGTGACTAAAAGGATGAC+AGG 0.545138 7_1:-13901750 Msa1010720:intron
TTGGAGTCATTGTTTGTGGA+CGG 0.547119 7_1:-13900131 Msa1010720:CDS
GATGATCCTAGGGTTTGGCT+AGG 0.551283 7_1:+13902847 None:intergenic
AGGTGAAGATAGACTTCGAT+CGG 0.552049 7_1:-13902420 Msa1010720:five_prime_UTR
ATATCACATAACAGCCTCAC+AGG 0.552734 7_1:-13902931 Msa1010720:five_prime_UTR
CTTCCTTCTCCCCTTTCGTG+AGG 0.555775 7_1:-13902493 Msa1010720:five_prime_UTR
AAGAAGCATGTTGAGTTACA+AGG 0.556538 7_1:+13903296 None:intergenic
ATGATCCTAGGGTTTGGCTA+GGG 0.559063 7_1:+13902848 None:intergenic
TTGTATGGACTCCTCAGACT+TGG 0.559896 7_1:+13900357 None:intergenic
CACTTGCAGCATTATTATTG+GGG 0.561494 7_1:+13903244 None:intergenic
TTGATTACCATGTGTTAATG+AGG 0.564366 7_1:+13902017 None:intergenic
AGATTGCGGTGGTGGTGAGA+GGG 0.567430 7_1:-13902086 Msa1010720:five_prime_UTR
TTGGAATTCAATGAACTAAG+TGG 0.567868 7_1:-13903003 Msa1010720:five_prime_UTR
AAACCGGAACTTGTTTGCCA+AGG 0.570618 7_1:+13900413 None:intergenic
GGATCGAAGACTGTAGCGGC+AGG 0.571068 7_1:-13901769 Msa1010720:five_prime_UTR
ACAGATAGAAACTGATAGAA+GGG 0.571825 7_1:+13902450 None:intergenic
AACCGGAACTTGTTTGCCAA+GGG 0.574258 7_1:+13900414 None:intergenic
GGAGAGCTACCAATGGAGCT+AGG 0.575511 7_1:-13902982 Msa1010720:five_prime_UTR
TCAATTTAGTTTCAACGCAG+TGG 0.581645 7_1:-13902127 Msa1010720:five_prime_UTR
ATCACACTACTGAAAGCAGC+TGG 0.584544 7_1:-13902774 Msa1010720:five_prime_UTR
AAAGCGGCAGCAATTTGCTA+AGG 0.584821 7_1:-13902215 Msa1010720:five_prime_UTR
GAAGGGTGTAGATGGTGGTG+GGG 0.584914 7_1:+13902467 None:intergenic
ATCTTAACTATACAAATGAA+AGG 0.586446 7_1:-13902887 Msa1010720:five_prime_UTR
AGTGGCAACGCAACAGTGAG+AGG 0.590007 7_1:-13902109 Msa1010720:five_prime_UTR
ATTAGCCAATCAGATTTAGA+GGG 0.590451 7_1:-13902711 Msa1010720:five_prime_UTR
AGCGAAGATGAAGATGAAGA+AGG 0.592403 7_1:-13901834 Msa1010720:five_prime_UTR
CTCACGAAAGGGGAGAAGGA+AGG 0.593511 7_1:+13902494 None:intergenic
AAGCACTTGCAGCATTATTG+GGG 0.596913 7_1:+13903169 None:intergenic
TTATTGAACCACGAATTGGA+TGG 0.600940 7_1:-13901790 Msa1010720:five_prime_UTR
GCGAGCATTCAATATGGTGG+AGG 0.602271 7_1:-13901554 Msa1010720:CDS
GAAGAGAACAAGCATTCGAA+TGG 0.606719 7_1:-13901582 Msa1010720:CDS
CACATAACAGCCTCACAGGA+AGG 0.611274 7_1:-13902927 Msa1010720:five_prime_UTR
CCAAACCCTAGCCAAACCCT+AGG 0.611987 7_1:-13902853 Msa1010720:five_prime_UTR
GGTGGTGAGAGGGAATCGGG+TGG 0.617114 7_1:-13902076 Msa1010720:five_prime_UTR
TCTGTGTTGTGCATAAAGGA+AGG 0.622104 7_1:+13901527 None:intergenic
ATGTTTGGAAAGATATCACG+TGG 0.624110 7_1:+13902612 None:intergenic
GAAAGGGGAGAAGGAAGGAG+AGG 0.626442 7_1:+13902499 None:intergenic
CGGCCGGATAACAGGGACGG+TGG 0.630542 7_1:+13902528 None:intergenic
GGGTTTACACTTATTAAACA+CGG 0.633042 7_1:-13902284 Msa1010720:five_prime_UTR
GATCGCAGTTCTGCTAAAAG+CGG 0.636691 7_1:-13902231 Msa1010720:five_prime_UTR
CAGAACTGCGATCAGAGCAA+CGG 0.637581 7_1:+13902241 None:intergenic
TGTTTCTGCCTGCTGCGCAG+TGG 0.642132 7_1:-13900192 Msa1010720:CDS
AATCTGATTGGCTAATTGTG+TGG 0.646710 7_1:+13902718 None:intergenic
GAAGCGAGCATTCAATATGG+TGG 0.648098 7_1:-13901557 Msa1010720:CDS
GGGAAGAAAAGAAAGAATTG+GGG 0.648806 7_1:+13903264 None:intergenic
TGATAGAAGGGTGTAGATGG+TGG 0.649052 7_1:+13902462 None:intergenic
GTCTCAGCCTCATTAACACA+TGG 0.650642 7_1:-13902024 Msa1010720:five_prime_UTR
GCAACAGTGAGAGGAGATTG+CGG 0.651509 7_1:-13902100 Msa1010720:five_prime_UTR
GGATGGATCGAAGACTGTAG+CGG 0.671442 7_1:-13901773 Msa1010720:five_prime_UTR
TGGCGGCCGGATAACAGGGA+CGG 0.675887 7_1:+13902525 None:intergenic
ACTAAGTGGAGAGCTACCAA+TGG 0.678247 7_1:-13902989 Msa1010720:five_prime_UTR
TGTTTGTGGACGGCTGTGGG+AGG 0.680946 7_1:-13900121 Msa1010720:intron
AATCGGGTGGAGTTAACGGA+GGG 0.686740 7_1:-13902063 Msa1010720:five_prime_UTR
TAATAAGAAGCCTTCCTGTG+AGG 0.691501 7_1:+13902917 None:intergenic
GAATCGGGTGGAGTTAACGG+AGG 0.699783 7_1:-13902064 Msa1010720:five_prime_UTR
AAGAAAACTGTCGATTCCGG+CGG 0.713826 7_1:-13902391 Msa1010720:five_prime_UTR
AGTTTCTATCTGTCTCAGAG+AGG 0.725839 7_1:-13902440 Msa1010720:five_prime_UTR
ATCAAACAGACATGACAGTG+AGG 0.732212 7_1:-13902310 Msa1010720:five_prime_UTR
AAACACGGTGAGTCTAGACA+CGG 0.735199 7_1:-13902269 Msa1010720:five_prime_UTR
ACAGTGAGAGGAGATTGCGG+TGG 0.746231 7_1:-13902097 Msa1010720:five_prime_UTR
CACGGTGAGTCTAGACACGG+CGG 0.794480 7_1:-13902266 Msa1010720:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAATAAAAAAA+TGG - chr7_1:13902054-13902073 Msa1010720:five_prime_UTR 0.0%
!!! AAGAAAAATATTTTTTAATG+AGG + chr7_1:13900650-13900669 None:intergenic 10.0%
!!! GTTTTAATTTTTTTTTTTCT+GGG - chr7_1:13901925-13901944 Msa1010720:intron 10.0%
!!! AATTTTAAAACATTGTATTA+TGG - chr7_1:13902422-13902441 Msa1010720:five_prime_UTR 10.0%
!! ATAATATATTACTTTATGTA+AGG - chr7_1:13902515-13902534 Msa1010720:five_prime_UTR 10.0%
!! TAATATATTACTTTATGTAA+GGG - chr7_1:13902516-13902535 Msa1010720:five_prime_UTR 10.0%
!! TGACAAATAAATAAATAAAA+AGG + chr7_1:13903093-13903112 None:intergenic 10.0%
!!! TTTTTTATAAAATTACATAG+AGG - chr7_1:13903290-13903309 Msa1010720:five_prime_UTR 10.0%
!!! TTTTTTTTTTTTTTGTCTTA+AGG + chr7_1:13903682-13903701 None:intergenic 10.0%
!! AATATTTGAATTTAAAAAAG+AGG + chr7_1:13904533-13904552 None:intergenic 10.0%
!! TAAATAAATATATAAACACT+TGG + chr7_1:13907995-13908014 None:intergenic 10.0%
!! TATATTACTTTAATTGTATT+TGG - chr7_1:13908120-13908139 Msa1010720:intron 10.0%
!! AAAAAAACTAAAAAAGAAGA+CGG - chr7_1:13900350-13900369 Msa1010720:CDS 15.0%
!!! TACATTCATTTGTTATTTTT+TGG + chr7_1:13900491-13900510 None:intergenic 15.0%
!! AAAATAACAAATGAATGTAT+TGG - chr7_1:13900492-13900511 Msa1010720:intron 15.0%
!! AAAAAAACTGAAGAAATAAA+AGG + chr7_1:13901811-13901830 None:intergenic 15.0%
!!! AAAGACGATAATTTTTTTTT+TGG - chr7_1:13901902-13901921 Msa1010720:intron 15.0%
!!! AAGACGATAATTTTTTTTTT+GGG - chr7_1:13901903-13901922 Msa1010720:intron 15.0%
!!! GGTTTTAATTTTTTTTTTTC+TGG - chr7_1:13901924-13901943 Msa1010720:intron 15.0%
!! AAAAAAATGGAAAAAAGTAA+CGG - chr7_1:13902067-13902086 Msa1010720:five_prime_UTR 15.0%
!!! AAATTTTAAAATCAACGATT+TGG + chr7_1:13902149-13902168 None:intergenic 15.0%
!!! ATCGTTGATTTTAAAATTTA+TGG - chr7_1:13902150-13902169 Msa1010720:five_prime_UTR 15.0%
!!! TCGTTGATTTTAAAATTTAT+GGG - chr7_1:13902151-13902170 Msa1010720:five_prime_UTR 15.0%
!! ATATCTATCTTATTAAAGTT+TGG + chr7_1:13902226-13902245 None:intergenic 15.0%
!!! ATAAAAAAAATAAGTGGTTT+TGG + chr7_1:13903278-13903297 None:intergenic 15.0%
!! TATTATGCATAGAAAATATA+AGG - chr7_1:13904083-13904102 Msa1010720:intron 15.0%
!! TATGTATTTAAAAGACAATT+TGG - chr7_1:13904418-13904437 Msa1010720:intron 15.0%
!! ATATCATTATAAATTCAACA+GGG + chr7_1:13904768-13904787 None:intergenic 15.0%
!!! ATTTTCATTTTTATGTTTGA+TGG + chr7_1:13904876-13904895 None:intergenic 15.0%
!! CTTATTAAATTATTCTATGT+GGG + chr7_1:13905332-13905351 None:intergenic 15.0%
!! TAAAGATCAAATAAATTATG+AGG + chr7_1:13907359-13907378 None:intergenic 15.0%
!! ATACAAATTATAAACTCAAA+AGG + chr7_1:13907601-13907620 None:intergenic 15.0%
!!! ATAGTTTGATAGTTTAAAAT+AGG + chr7_1:13907832-13907851 None:intergenic 15.0%
!! ATATATTTATTTATTGCTAC+AGG - chr7_1:13908002-13908021 Msa1010720:intron 15.0%
!! AAACAAAAAGTAAAGAAATT+TGG - chr7_1:13908243-13908262 Msa1010720:intron 15.0%
!! ATAAGACAAATTCTATAAAG+CGG - chr7_1:13900766-13900785 Msa1010720:intron 20.0%
!! TGAAAACAACAAATTAGTTA+GGG + chr7_1:13902181-13902200 None:intergenic 20.0%
!! ATGAAAACAACAAATTAGTT+AGG + chr7_1:13902180-13902199 None:intergenic 20.0%
!!! CTAATTTGTTGTTTTCATTT+TGG - chr7_1:13900846-13900865 Msa1010720:intron 20.0%
!!! TCGTTGATTTTAAAACTTAT+GGG + chr7_1:13900873-13900892 None:intergenic 20.0%
!!! ATCGTTGATTTTAAAACTTA+TGG + chr7_1:13900874-13900893 None:intergenic 20.0%
!!! AAGTTTTAAAATCAACGATT+TGG - chr7_1:13900875-13900894 Msa1010720:intron 20.0%
!! AAAACTGAAGTAAAAATTGA+GGG + chr7_1:13900902-13900921 None:intergenic 20.0%
!!! TTTTACTTCAGTTTTCAAAA+AGG - chr7_1:13900907-13900926 Msa1010720:intron 20.0%
!! GAAAAAATGGAAAAAAGTAA+CGG + chr7_1:13900959-13900978 None:intergenic 20.0%
!! AAAAATGATGAAGATAATGA+TGG + chr7_1:13901104-13901123 None:intergenic 20.0%
!!! ATGACATTGATTTCAATTTT+TGG - chr7_1:13901531-13901550 Msa1010720:CDS 20.0%
!!! GAACATCTTCATAATAATTT+TGG + chr7_1:13901759-13901778 None:intergenic 20.0%
!!! TTTTTTCAATGAGAAAAAAG+TGG - chr7_1:13901831-13901850 Msa1010720:five_prime_UTR 20.0%
!!! CTAATTTGTTGTTTTCATTT+TGG + chr7_1:13900846-13900865 None:intergenic 20.0%
!! ATGAAAACAACAAATTAGTT+AGG - chr7_1:13902180-13902199 Msa1010720:five_prime_UTR 20.0%
!! TGAAAACAACAAATTAGTTA+GGG - chr7_1:13902181-13902200 Msa1010720:five_prime_UTR 20.0%
!! TTAACTTCTACTTTCAAAAA+GGG + chr7_1:13902251-13902270 None:intergenic 20.0%
!!! ATTTTTCTTATATTTTGCCT+AGG - chr7_1:13902543-13902562 Msa1010720:five_prime_UTR 20.0%
!!! TTTTTACCATTAGATTTGAA+AGG - chr7_1:13902820-13902839 Msa1010720:five_prime_UTR 20.0%
!!! TAAAGATAATAACTTGTCAA+TGG + chr7_1:13903490-13903509 None:intergenic 20.0%
!!! AGACTCTTTAAAAAGATAAA+GGG + chr7_1:13903919-13903938 None:intergenic 20.0%
!!! AAAAATCACTTTAGAAGATA+AGG - chr7_1:13904266-13904285 Msa1010720:intron 20.0%
!!! GAAAGATATATCAATTTTGA+AGG - chr7_1:13904335-13904354 Msa1010720:intron 20.0%
!!! TGTTTTAATTTCTCTTTGAA+TGG - chr7_1:13904469-13904488 Msa1010720:intron 20.0%
!! TTTGAATTTAAAAAAGAGGT+TGG + chr7_1:13904529-13904548 None:intergenic 20.0%
!! GACAATCTATGATTATTTAA+AGG - chr7_1:13904580-13904599 Msa1010720:intron 20.0%
!! CATATCATTATAAATTCAAC+AGG + chr7_1:13904769-13904788 None:intergenic 20.0%
!! GCTTATTAAATTATTCTATG+TGG + chr7_1:13905333-13905352 None:intergenic 20.0%
!! AAAGTGTAATGTATATTGAA+TGG - chr7_1:13905372-13905391 Msa1010720:intron 20.0%
!! GATAAAAATAGACATGAATT+TGG + chr7_1:13905620-13905639 None:intergenic 20.0%
!!! ATTCATGTCTATTTTTATCT+AGG - chr7_1:13905621-13905640 Msa1010720:intron 20.0%
!!! TTCATGTCTATTTTTATCTA+GGG - chr7_1:13905622-13905641 Msa1010720:intron 20.0%
!! ATCTTAACTATACAAATGAA+AGG - chr7_1:13905836-13905855 Msa1010720:intron 20.0%
!! AAACATAATAAAGAAAAGTG+AGG + chr7_1:13907958-13907977 None:intergenic 20.0%
!! TACTTTAATTGTATTTGGTA+TGG - chr7_1:13908125-13908144 Msa1010720:intron 20.0%
! AATGTTGTCAGTAGATAATT+TGG + chr7_1:13900240-13900259 None:intergenic 25.0%
! TATCGGCAATATAAACAATA+GGG + chr7_1:13900450-13900469 None:intergenic 25.0%
! TATTGTTTATATTGCCGATA+GGG - chr7_1:13900450-13900469 Msa1010720:CDS 25.0%
!! TTTTCATTTATACGTTGTGA+AGG - chr7_1:13900699-13900718 Msa1010720:CDS 25.0%
! AACCGTTACTTAAAACTTTA+AGG - chr7_1:13900798-13900817 Msa1010720:intron 25.0%
!!! AGCCTTAAAGTTTTAAGTAA+CGG + chr7_1:13900803-13900822 None:intergenic 25.0%
! TTAAGGCTTAATTCGATATT+TGG - chr7_1:13900815-13900834 Msa1010720:intron 25.0%
! GAAAACAACAAATTAGTTAG+GGG + chr7_1:13902182-13902201 None:intergenic 25.0%
! GAAAACTGAAGTAAAAATTG+AGG + chr7_1:13900903-13900922 None:intergenic 25.0%
! AAATTGAAATCAATGTCATG+TGG + chr7_1:13901530-13901549 None:intergenic 25.0%
! GGTAAAGTAAAATTAGAAGA+AGG + chr7_1:13901738-13901757 None:intergenic 25.0%
! AACTGAAGAAATAAAAGGAA+TGG + chr7_1:13901806-13901825 None:intergenic 25.0%
! AAAGTAAAGGAAAATAAGAG+AGG - chr7_1:13901860-13901879 Msa1010720:five_prime_UTR 25.0%
!!! TTTTTTTCTGGGATTGTTTT+TGG - chr7_1:13901936-13901955 Msa1010720:intron 25.0%
! AAAAATGATGAAGATGATGA+TGG - chr7_1:13901969-13901988 Msa1010720:intron 25.0%
! AAAACTGAAGCAAAAATTGA+GGG - chr7_1:13902122-13902141 Msa1010720:five_prime_UTR 25.0%
! GAAAACAACAAATTAGTTAG+GGG - chr7_1:13902182-13902201 Msa1010720:five_prime_UTR 25.0%
! GTTAACTTCTACTTTCAAAA+AGG + chr7_1:13902252-13902271 None:intergenic 25.0%
! AAACAAAACAAAAAACGTTG+AGG + chr7_1:13902322-13902341 None:intergenic 25.0%
! AATGAAACATGTGATGATTA+TGG + chr7_1:13902475-13902494 None:intergenic 25.0%
! GACCCATAAAATATTAGAAA+CGG - chr7_1:13902565-13902584 Msa1010720:five_prime_UTR 25.0%
! ACCCATAAAATATTAGAAAC+GGG - chr7_1:13902566-13902585 Msa1010720:five_prime_UTR 25.0%
!! TCCCGTTTCTAATATTTTAT+GGG + chr7_1:13902570-13902589 None:intergenic 25.0%
!! ATCCCGTTTCTAATATTTTA+TGG + chr7_1:13902571-13902590 None:intergenic 25.0%
! GTTCAAAATTCATTAACAAG+AGG - chr7_1:13902680-13902699 Msa1010720:five_prime_UTR 25.0%
! GTAAAAAGTAAACTTGACTA+TGG + chr7_1:13902807-13902826 None:intergenic 25.0%
! TGTATTCCTTTCAAATCTAA+TGG + chr7_1:13902829-13902848 None:intergenic 25.0%
!!! CAATGTTCTAAAAATTGAAC+CGG + chr7_1:13903188-13903207 None:intergenic 25.0%
! AAAATTACATAGAGGTAAGT+TGG - chr7_1:13903298-13903317 Msa1010720:five_prime_UTR 25.0%
! AAATTACATAGAGGTAAGTT+GGG - chr7_1:13903299-13903318 Msa1010720:five_prime_UTR 25.0%
!! ATGTAACATCATTTTCAATG+AGG - chr7_1:13903601-13903620 Msa1010720:intron 25.0%
! CATGTGAATAATGTAATGAA+TGG + chr7_1:13903648-13903667 None:intergenic 25.0%
!! GAGACTCTTTAAAAAGATAA+AGG + chr7_1:13903920-13903939 None:intergenic 25.0%
! TGATACCATCATAGAAATTT+GGG + chr7_1:13904018-13904037 None:intergenic 25.0%
! ATGATACCATCATAGAAATT+TGG + chr7_1:13904019-13904038 None:intergenic 25.0%
! CAAAATTATAATGACTTAGC+AGG + chr7_1:13904132-13904151 None:intergenic 25.0%
! AGATAAGGACAAATAAAGAA+AGG - chr7_1:13904281-13904300 Msa1010720:intron 25.0%
!! CAATTTGGTGAATCATTATT+TGG - chr7_1:13904433-13904452 Msa1010720:intron 25.0%
!!! TTTTTTTTTGTCACTGACTT+AGG + chr7_1:13904909-13904928 None:intergenic 25.0%
! AAAGATCAAGTGTTAACTTA+TGG - chr7_1:13904988-13905007 Msa1010720:intron 25.0%
!!! ATTGTTTTTTGTTGTAAGGT+AGG + chr7_1:13905017-13905036 None:intergenic 25.0%
! TACCTTACAACAAAAAACAA+TGG - chr7_1:13905016-13905035 Msa1010720:intron 25.0%
!!! ATCCATTGTTTTTTGTTGTA+AGG + chr7_1:13905021-13905040 None:intergenic 25.0%
! TGAAACAACTCTTGATTAAA+AGG + chr7_1:13905126-13905145 None:intergenic 25.0%
!! TATCCCTCTAATTACATTTT+AGG + chr7_1:13905150-13905169 None:intergenic 25.0%
! TCTCATACAACATAAAAATG+TGG - chr7_1:13905210-13905229 Msa1010720:intron 25.0%
! TGTAATGTATATTGAATGGT+TGG - chr7_1:13905376-13905395 Msa1010720:intron 25.0%
!!! TCATGTCTATTTTTATCTAG+GGG - chr7_1:13905623-13905642 Msa1010720:intron 25.0%
!! TCAATTCTTTCTTCTTGTTT+CGG + chr7_1:13906377-13906396 None:intergenic 25.0%
!!! TTCCTTCTGCTTTAATTTTT+TGG - chr7_1:13906744-13906763 Msa1010720:intron 25.0%
! AACCAAAAAATTAAAGCAGA+AGG + chr7_1:13906749-13906768 None:intergenic 25.0%
! ATCCACTGAAATAATGAAAA+GGG + chr7_1:13906778-13906797 None:intergenic 25.0%
! AATCCACTGAAATAATGAAA+AGG + chr7_1:13906779-13906798 None:intergenic 25.0%
!!! TTGAGCTTTTAATTATTGAC+TGG - chr7_1:13907404-13907423 Msa1010720:intron 25.0%
! ACAGTGAGAAAACATAATTT+GGG + chr7_1:13907472-13907491 None:intergenic 25.0%
! TACAGTGAGAAAACATAATT+TGG + chr7_1:13907473-13907492 None:intergenic 25.0%
! TTATAATTAGCGAGTCAATT+GGG + chr7_1:13907515-13907534 None:intergenic 25.0%
! ATTATAATTAGCGAGTCAAT+TGG + chr7_1:13907516-13907535 None:intergenic 25.0%
! CTAATTATAATACAACCCTT+CGG - chr7_1:13907525-13907544 Msa1010720:intron 25.0%
! GATTCAAAACAGAATTATCA+AGG - chr7_1:13907643-13907662 Msa1010720:intron 25.0%
! TCAGTTGAAAACAGAATAAT+CGG - chr7_1:13907708-13907727 Msa1010720:intron 25.0%
! TATTTATTTATTGCTACAGG+TGG - chr7_1:13908005-13908024 Msa1010720:intron 25.0%
!!! GGATCATTTGTTTTAGAATA+AGG - chr7_1:13908220-13908239 Msa1010720:intron 25.0%
!!! TTTTTGGTTGTGGTATTTTT+AGG - chr7_1:13908695-13908714 Msa1010720:intron 25.0%
!!! TTTTGGTTGTGGTATTTTTA+GGG - chr7_1:13908696-13908715 Msa1010720:intron 25.0%
TTAGTTGAATTGTAGCTCTT+TGG - chr7_1:13900208-13900227 Msa1010720:CDS 30.0%
TAAAAAAGAAGACGGTAAAG+AGG - chr7_1:13900358-13900377 Msa1010720:CDS 30.0%
AAAAAAGAAGACGGTAAAGA+GGG - chr7_1:13900359-13900378 Msa1010720:CDS 30.0%
! ATAGGGTGATGTTGAATTTT+GGG + chr7_1:13900433-13900452 None:intergenic 30.0%
! AATAGGGTGATGTTGAATTT+TGG + chr7_1:13900434-13900453 None:intergenic 30.0%
CTATCGGCAATATAAACAAT+AGG + chr7_1:13900451-13900470 None:intergenic 30.0%
CTATTGTTTATATTGCCGAT+AGG - chr7_1:13900449-13900468 Msa1010720:CDS 30.0%
CATGAAATATACATCCCTAT+CGG + chr7_1:13900467-13900486 None:intergenic 30.0%
! ATCAAACATGAGATTTTGCT+TGG - chr7_1:13900586-13900605 Msa1010720:intron 30.0%
!!! AAGTTTTAAGTAACGGTTCA+CGG + chr7_1:13900796-13900815 None:intergenic 30.0%
AAAAAAAATCAACGTGTTGC+TGG - chr7_1:13901655-13901674 Msa1010720:intron 30.0%
! AAAAAAATCAACGTGTTGCT+GGG - chr7_1:13901656-13901675 Msa1010720:intron 30.0%
GAAGAAATAAAAGGAATGGA+TGG + chr7_1:13901802-13901821 None:intergenic 30.0%
TTTCAATGAGAAAAAAGTGG+AGG - chr7_1:13901834-13901853 Msa1010720:five_prime_UTR 30.0%
TTCAATGAGAAAAAAGTGGA+GGG - chr7_1:13901835-13901854 Msa1010720:five_prime_UTR 30.0%
ATAAGAGAGGTGAAAAGAAT+TGG - chr7_1:13901873-13901892 Msa1010720:intron 30.0%
!!! GGATTGTTTTTGGATTTTTC+TGG - chr7_1:13901946-13901965 Msa1010720:intron 30.0%
AACGGCAATTAGATATTTGA+CGG - chr7_1:13902085-13902104 Msa1010720:five_prime_UTR 30.0%
CAATTAGATATTTGACGGAA+AGG - chr7_1:13902090-13902109 Msa1010720:five_prime_UTR 30.0%
GAAAACTGAAGCAAAAATTG+AGG - chr7_1:13902121-13902140 Msa1010720:five_prime_UTR 30.0%
AACATTGTATTATGGTGATC+TGG - chr7_1:13902430-13902449 Msa1010720:five_prime_UTR 30.0%
ACATTGTATTATGGTGATCT+GGG - chr7_1:13902431-13902450 Msa1010720:five_prime_UTR 30.0%
! TCTAATATTTTATGGGTCCT+AGG + chr7_1:13902563-13902582 None:intergenic 30.0%
! GAATTTTGAACTCAAGCAAA+AGG + chr7_1:13902671-13902690 None:intergenic 30.0%
!! TCAAAAGATTCTAAGATGTG+AGG - chr7_1:13902727-13902746 Msa1010720:five_prime_UTR 30.0%
AAAAGTAAACTTGACTATGG+TGG + chr7_1:13902804-13902823 None:intergenic 30.0%
CAAATTGAAAAACGAAAACG+AGG + chr7_1:13902975-13902994 None:intergenic 30.0%
ACTCTAACTATTTCAATCTC+CGG - chr7_1:13903166-13903185 Msa1010720:five_prime_UTR 30.0%
TTGAGTATCTATGTAAGTGT+TGG + chr7_1:13903369-13903388 None:intergenic 30.0%
AGTAGTTACAAATTCTTGCA+AGG + chr7_1:13903444-13903463 None:intergenic 30.0%
TTGAATTATGTTGCTATGCT+TGG + chr7_1:13903727-13903746 None:intergenic 30.0%
ATTTAAACACAATTAAGCCG+AGG + chr7_1:13903883-13903902 None:intergenic 30.0%
AAAAAGATAAAGGGTCATGA+AGG + chr7_1:13903910-13903929 None:intergenic 30.0%
!! CTTTTTAAAGAGTCTCACAT+AGG - chr7_1:13903924-13903943 Msa1010720:intron 30.0%
TAAAAGAAGATCTGAACATG+TGG - chr7_1:13903948-13903967 Msa1010720:intron 30.0%
AAAAGAAGATCTGAACATGT+GGG - chr7_1:13903949-13903968 Msa1010720:intron 30.0%
TAGAAATACTCACTCTACAA+TGG + chr7_1:13904057-13904076 None:intergenic 30.0%
GTTCAAATGAAGAAAAGTTG+AGG - chr7_1:13904217-13904236 Msa1010720:intron 30.0%
! TTGTGCATTTTTCTTTGATG+TGG + chr7_1:13904678-13904697 None:intergenic 30.0%
AGTTTGTGATGATACTCTTA+TGG + chr7_1:13904718-13904737 None:intergenic 30.0%
!! AGAGTATCATCACAAACTTT+TGG - chr7_1:13904720-13904739 Msa1010720:intron 30.0%
!! CACAAACTTTTGGTAACAAA+TGG - chr7_1:13904730-13904749 Msa1010720:intron 30.0%
!! TCACTGACTTAGGTTATATA+TGG + chr7_1:13904899-13904918 None:intergenic 30.0%
TCAGCCTAAAATGTAATTAG+AGG - chr7_1:13905143-13905162 Msa1010720:intron 30.0%
CAGCCTAAAATGTAATTAGA+GGG - chr7_1:13905144-13905163 Msa1010720:intron 30.0%
TCTAATATTGCATTGCGAAT+AGG - chr7_1:13905185-13905204 Msa1010720:intron 30.0%
CTAATATTGCATTGCGAATA+GGG - chr7_1:13905186-13905205 Msa1010720:intron 30.0%
!!! TGCTGATTTTTAGGATATAC+TGG + chr7_1:13905261-13905280 None:intergenic 30.0%
!!! CAACACATATGCTGATTTTT+AGG + chr7_1:13905270-13905289 None:intergenic 30.0%
GACATGAATTTGGATATGTT+TGG + chr7_1:13905610-13905629 None:intergenic 30.0%
TTGTAACACAATTACTTGAC+TGG - chr7_1:13905647-13905666 Msa1010720:intron 30.0%
TTAGATTTGACAGTGACTTT+GGG + chr7_1:13905679-13905698 None:intergenic 30.0%
TTTAGATTTGACAGTGACTT+TGG + chr7_1:13905680-13905699 None:intergenic 30.0%
TTGGAATTCAATGAACTAAG+TGG - chr7_1:13905720-13905739 Msa1010720:intron 30.0%
AAAAAACCAAGATGATCCTA+GGG + chr7_1:13905889-13905908 None:intergenic 30.0%
AAAAAAACCAAGATGATCCT+AGG + chr7_1:13905890-13905909 None:intergenic 30.0%
! AGTGTGATATCACATCATTT+TGG + chr7_1:13905937-13905956 None:intergenic 30.0%
TAGTTGTGTTTGTCTTGAAT+TGG + chr7_1:13905975-13905994 None:intergenic 30.0%
AATTAGCCAATCAGATTTAG+AGG - chr7_1:13906011-13906030 Msa1010720:intron 30.0%
ATTAGCCAATCAGATTTAGA+GGG - chr7_1:13906012-13906031 Msa1010720:intron 30.0%
CAACAGCAAAATAAACCAAT+AGG - chr7_1:13906078-13906097 Msa1010720:intron 30.0%
!!! AGAAGTTCTGTTTTGATGTT+TGG + chr7_1:13906129-13906148 None:intergenic 30.0%
ACAGATAGAAACTGATAGAA+GGG + chr7_1:13906276-13906295 None:intergenic 30.0%
GGGTTTACACTTATTAAACA+CGG - chr7_1:13906439-13906458 Msa1010720:intron 30.0%
ATCTTAACTCAGGAAAGAAA+AGG + chr7_1:13906549-13906568 None:intergenic 30.0%
CTCAAAAATCATCTTAACTC+AGG + chr7_1:13906559-13906578 None:intergenic 30.0%
TTGATTACCATGTGTTAATG+AGG + chr7_1:13906709-13906728 None:intergenic 30.0%
ACATGGTAATCAATCTTTAC+AGG - chr7_1:13906716-13906735 Msa1010720:intron 30.0%
! TTCCCTTTTCATTATTTCAG+TGG - chr7_1:13906773-13906792 Msa1010720:intron 30.0%
AATGATAAATCAAAGCTTCC+AGG + chr7_1:13906809-13906828 None:intergenic 30.0%
ACAGTTAGCTACAAATGTTT+CGG - chr7_1:13906857-13906876 Msa1010720:intron 30.0%
GAATTTATTGAACCACGAAT+TGG - chr7_1:13906929-13906948 Msa1010720:intron 30.0%
TGTAGGGTTTATTGTAAACA+AGG - chr7_1:13906996-13907015 Msa1010720:intron 30.0%
TTGTTCCCAAACTGAAATAA+TGG - chr7_1:13907056-13907075 Msa1010720:intron 30.0%
TCAAATAAATTATGAGGCAG+AGG + chr7_1:13907353-13907372 None:intergenic 30.0%
!! GCTTTTAATTATTGACTGGT+TGG - chr7_1:13907408-13907427 Msa1010720:intron 30.0%
AGTGAGAAAACATAATTTGG+GGG + chr7_1:13907470-13907489 None:intergenic 30.0%
CAGTGAGAAAACATAATTTG+GGG + chr7_1:13907471-13907490 None:intergenic 30.0%
!! TTCTGTTTTGAATCAATCTG+AGG + chr7_1:13907637-13907656 None:intergenic 30.0%
AAAACAGAATTATCAAGGCA+TGG - chr7_1:13907648-13907667 Msa1010720:intron 30.0%
AACTGACATTATTCCACAAA+AGG + chr7_1:13907694-13907713 None:intergenic 30.0%
!! CTGTTTGGTGTTTAATACAT+TGG + chr7_1:13907886-13907905 None:intergenic 30.0%
ACTACACACTTACATTTACT+TGG + chr7_1:13908070-13908089 None:intergenic 30.0%
GATTAACTGAACACAATACT+TGG - chr7_1:13908182-13908201 Msa1010720:intron 30.0%
ACTTGGATTCTTTCTAACTT+TGG - chr7_1:13908199-13908218 Msa1010720:intron 30.0%
TAAATCCTGATCATCTTGTA+TGG + chr7_1:13908384-13908403 None:intergenic 30.0%
TCTCAATCTTCTAACAATCA+TGG - chr7_1:13908407-13908426 Msa1010720:intron 30.0%
ATTTCAGTGTCTATTGTTTC+AGG - chr7_1:13908456-13908475 Msa1010720:intron 30.0%
AGATTTCAAAGTCATAGCTT+TGG - chr7_1:13908665-13908684 Msa1010720:intron 30.0%
!!! TTTGGTTGTGGTATTTTTAG+GGG - chr7_1:13908697-13908716 Msa1010720:five_prime_UTR 30.0%
AAGAGGGATTGTAATAGAGA+TGG - chr7_1:13900375-13900394 Msa1010720:CDS 35.0%
! TTCTCTCCATTTCTGTTTTG+CGG + chr7_1:13900613-13900632 None:intergenic 35.0%
!! GATAATGATGGTGTTGATGA+AGG + chr7_1:13901092-13901111 None:intergenic 35.0%
! TTTTTCCAGAACATCGATAC+TGG - chr7_1:13901119-13901138 Msa1010720:intron 35.0%
! TTTTCCAGAACATCGATACT+GGG - chr7_1:13901120-13901139 Msa1010720:intron 35.0%
GACTATCTCCAAGAAAAACA+TGG + chr7_1:13901303-13901322 None:intergenic 35.0%
! GCTGAGTTTTTCTATTTCAG+TGG - chr7_1:13901370-13901389 Msa1010720:intron 35.0%
TGTAGCTTCATACCCATTAA+TGG + chr7_1:13901455-13901474 None:intergenic 35.0%
TTTATCTTCTTTCTCCTCCA+TGG + chr7_1:13901579-13901598 None:intergenic 35.0%
AGGAGAAAGAAGATAAAGTG+AGG - chr7_1:13901582-13901601 Msa1010720:CDS 35.0%
TCAATGAGAAAAAAGTGGAG+GGG - chr7_1:13901836-13901855 Msa1010720:five_prime_UTR 35.0%
!! ATGATGGTGTTGATGAATGT+TGG - chr7_1:13901985-13902004 Msa1010720:intron 35.0%
GTTTGGCCTAATTCGATATT+TGG + chr7_1:13902209-13902228 None:intergenic 35.0%
TGAGGATGATCTTACAATGA+AGG + chr7_1:13902304-13902323 None:intergenic 35.0%
! CATTGAGCAGAAGATGTTTT+GGG - chr7_1:13902383-13902402 Msa1010720:five_prime_UTR 35.0%
! ATTGAGCAGAAGATGTTTTG+GGG - chr7_1:13902384-13902403 Msa1010720:five_prime_UTR 35.0%
GAAACATGTGATGATTATGG+CGG + chr7_1:13902472-13902491 None:intergenic 35.0%
! AAACTTGACTATGGTGGAAA+AGG + chr7_1:13902798-13902817 None:intergenic 35.0%
! GTGGAAAAAGGGATTTTGAA+AGG + chr7_1:13902929-13902948 None:intergenic 35.0%
TTGAAGGTAAGGTGGAAAAA+GGG + chr7_1:13902940-13902959 None:intergenic 35.0%
! TGTTGTTGTTGTTGAAGGTA+AGG + chr7_1:13902951-13902970 None:intergenic 35.0%
CACTATTAGCATTTCGTTGA+TGG + chr7_1:13903399-13903418 None:intergenic 35.0%
!! TTGGTAGTTTGCTTTGAGTA+TGG + chr7_1:13903708-13903727 None:intergenic 35.0%
!! TTCGTTCTTGTTGTTCTTTG+AGG + chr7_1:13903750-13903769 None:intergenic 35.0%
! CCTTGTTTGCAAAACAAGTT+AGG + chr7_1:13903833-13903852 None:intergenic 35.0%
!!! CCTAACTTGTTTTGCAAACA+AGG - chr7_1:13903830-13903849 Msa1010720:intron 35.0%
AAAGAAGATCTGAACATGTG+GGG - chr7_1:13903950-13903969 Msa1010720:intron 35.0%
TGAACTCATCCTTACAAAAC+CGG + chr7_1:13903995-13904014 None:intergenic 35.0%
GTTCACCCAAATTTCTATGA+TGG - chr7_1:13904010-13904029 Msa1010720:intron 35.0%
!!! AATTTTGAGACAAACCTGAG+TGG - chr7_1:13904637-13904656 Msa1010720:intron 35.0%
!!! ATTTTGAGACAAACCTGAGT+GGG - chr7_1:13904638-13904657 Msa1010720:intron 35.0%
!!! TTTTTGTTTTTTCCCCACTC+AGG + chr7_1:13904654-13904673 None:intergenic 35.0%
TTGTGATGATACTCTTATGG+AGG + chr7_1:13904715-13904734 None:intergenic 35.0%
! TATGAGGTGTTTGTTAAGGT+TGG + chr7_1:13904841-13904860 None:intergenic 35.0%
ACCTTAACAAACACCTCATA+TGG - chr7_1:13904841-13904860 Msa1010720:intron 35.0%
! TCCATATGAGGTGTTTGTTA+AGG + chr7_1:13904845-13904864 None:intergenic 35.0%
ATGGATTCAAGATCCATATG+AGG + chr7_1:13904857-13904876 None:intergenic 35.0%
! AAGAAGCATGTTGAGTTACA+AGG + chr7_1:13905430-13905449 None:intergenic 35.0%
GGGAAGAAAAGAAAGAATTG+GGG + chr7_1:13905462-13905481 None:intergenic 35.0%
GGGGAAGAAAAGAAAGAATT+GGG + chr7_1:13905463-13905482 None:intergenic 35.0%
TGGGGAAGAAAAGAAAGAAT+TGG + chr7_1:13905464-13905483 None:intergenic 35.0%
GGGGAAGAAAAGAAAGAAAA+TGG + chr7_1:13905538-13905557 None:intergenic 35.0%
TAAGCACTTGCAGCATTATT+GGG + chr7_1:13905486-13905505 None:intergenic 35.0%
ATAAGCACTTGCAGCATTAT+TGG + chr7_1:13905487-13905506 None:intergenic 35.0%
AAAGCTCAAAATCCTGAAGT+TGG - chr7_1:13905701-13905720 Msa1010720:intron 35.0%
GTTCATTGAATTCCAACTTC+AGG + chr7_1:13905716-13905735 None:intergenic 35.0%
!!! ATCATTTTGGCTCCAAAGAA+GGG + chr7_1:13905924-13905943 None:intergenic 35.0%
! AATCTGATTGGCTAATTGTG+TGG + chr7_1:13906008-13906027 None:intergenic 35.0%
TTTGCAAGTAACAACCAATC+AGG - chr7_1:13906035-13906054 Msa1010720:intron 35.0%
TAACAACCAATCAGGTTTAG+AGG - chr7_1:13906043-13906062 Msa1010720:intron 35.0%
AACAACCAATCAGGTTTAGA+GGG - chr7_1:13906044-13906063 Msa1010720:intron 35.0%
ATGTTTGGAAAGATATCACG+TGG + chr7_1:13906114-13906133 None:intergenic 35.0%
GACAGATAGAAACTGATAGA+AGG + chr7_1:13906277-13906296 None:intergenic 35.0%
!! TGAAAGAAAACTGTCGATTC+CGG - chr7_1:13906329-13906348 Msa1010720:intron 35.0%
! TCAATTTAGTTTCAACGCAG+TGG - chr7_1:13906596-13906615 Msa1010720:intron 35.0%
TTATTGAACCACGAATTGGA+TGG - chr7_1:13906933-13906952 Msa1010720:intron 35.0%
CATCGCCATTATTTCAGTTT+GGG + chr7_1:13907064-13907083 None:intergenic 35.0%
TCTATCTGTGTTGTGCATAA+AGG + chr7_1:13907203-13907222 None:intergenic 35.0%
CCAGTTGTATTGTCATGTAA+TGG + chr7_1:13907229-13907248 None:intergenic 35.0%
CCATTACATGACAATACAAC+TGG - chr7_1:13907226-13907245 Msa1010720:intron 35.0%
CTTCTGTCTTTGCATTCAAA+CGG - chr7_1:13907257-13907276 Msa1010720:intron 35.0%
GTGAGAAAACATAATTTGGG+GGG + chr7_1:13907469-13907488 None:intergenic 35.0%
! TGGGAAGTACAACAAATAGA+TGG + chr7_1:13907496-13907515 None:intergenic 35.0%
TCTAATGACTTCTTGCAAAG+AGG + chr7_1:13907575-13907594 None:intergenic 35.0%
! TCATGTAACTTTGCCTTTTG+TGG - chr7_1:13907678-13907697 Msa1010720:intron 35.0%
CATTTGCTTGTGTAAAACTG+TGG - chr7_1:13907930-13907949 Msa1010720:intron 35.0%
GGTAGAATAAGATTGTACAG+TGG - chr7_1:13908146-13908165 Msa1010720:intron 35.0%
ATTGTACAGTGGCAGTTATA+AGG - chr7_1:13908157-13908176 Msa1010720:intron 35.0%
TTGTACAGTGGCAGTTATAA+GGG - chr7_1:13908158-13908177 Msa1010720:intron 35.0%
CCAAGGGATGAAAATTGAAT+CGG + chr7_1:13908296-13908315 None:intergenic 35.0%
ATACCACAACCAAAAAAGCA+TGG + chr7_1:13908691-13908710 None:intergenic 35.0%
TAGAGATGGTAAGCAAAGTG+AGG - chr7_1:13900389-13900408 Msa1010720:CDS 40.0%
!! TTTTAAGTAACGGTTCACGG+CGG + chr7_1:13900793-13900812 None:intergenic 40.0%
CAGTTAGCTATTTGACGGTA+AGG + chr7_1:13900934-13900953 None:intergenic 40.0%
!! ATGATGGTGTTGATGAAGGT+TGG + chr7_1:13901088-13901107 None:intergenic 40.0%
!! ATTTCCCAGTATCGATGTTC+TGG + chr7_1:13901127-13901146 None:intergenic 40.0%
! TTCAATCTTTTCCTCGACGA+CGG - chr7_1:13901215-13901234 Msa1010720:intron 40.0%
! CAGTGACACCATGTTTTTCT+TGG - chr7_1:13901292-13901311 Msa1010720:intron 40.0%
TTTCTTGGAGATAGTCGACA+AGG - chr7_1:13901307-13901326 Msa1010720:intron 40.0%
ACGTGAATTAAGCTTGAGAG+AGG + chr7_1:13901498-13901517 None:intergenic 40.0%
TCTCTCAAGCTTAATTCACG+TGG - chr7_1:13901497-13901516 Msa1010720:intron 40.0%
CCATGGCAAATAGCAAGAAT+TGG + chr7_1:13901562-13901581 None:intergenic 40.0%
!! CCAATTCTTGCTATTTGCCA+TGG - chr7_1:13901559-13901578 Msa1010720:CDS 40.0%
!! ATTCTTGCTATTTGCCATGG+AGG - chr7_1:13901562-13901581 Msa1010720:CDS 40.0%
AAAGTGGAGGGGTAAAGTAA+AGG - chr7_1:13901847-13901866 Msa1010720:five_prime_UTR 40.0%
!! ATGGTGTTGATGAATGTTGG+TGG - chr7_1:13901988-13902007 Msa1010720:intron 40.0%
AGGGGACCAAATATCGAATT+AGG - chr7_1:13902200-13902219 Msa1010720:five_prime_UTR 40.0%
GGATGATCTTACAATGAAGG+TGG + chr7_1:13902301-13902320 None:intergenic 40.0%
! GCATTGAGCAGAAGATGTTT+TGG - chr7_1:13902382-13902401 Msa1010720:five_prime_UTR 40.0%
! TTATGGTGATCTGGGATATC+AGG - chr7_1:13902439-13902458 Msa1010720:five_prime_UTR 40.0%
GATGAGACCGAATGGTTTAA+GGG + chr7_1:13902627-13902646 None:intergenic 40.0%
! CTCAAGCAAAAGGTATAGTC+AGG + chr7_1:13902661-13902680 None:intergenic 40.0%
AAGATGTGAGGAAGACATCA+CGG - chr7_1:13902739-13902758 Msa1010720:five_prime_UTR 40.0%
CAACAACATCAATAGAGGCA+AGG + chr7_1:13902903-13902922 None:intergenic 40.0%
GGATGCAACAACATCAATAG+AGG + chr7_1:13902908-13902927 None:intergenic 40.0%
GTTGAAGGTAAGGTGGAAAA+AGG + chr7_1:13902941-13902960 None:intergenic 40.0%
! TGTTGTTGTTGAAGGTAAGG+TGG + chr7_1:13902948-13902967 None:intergenic 40.0%
! GAGGTTGTTGTTGTTGTTGA+AGG + chr7_1:13902956-13902975 None:intergenic 40.0%
GGTTCAAGAGAGCTTCATTA+AGG - chr7_1:13903320-13903339 Msa1010720:intron 40.0%
TTACATGTGTGTTCACGAGA+TGG + chr7_1:13903587-13903606 None:intergenic 40.0%
AAGAAGATCTGAACATGTGG+GGG - chr7_1:13903951-13903970 Msa1010720:intron 40.0%
TCTACAATGGATCTTAGACG+AGG + chr7_1:13904044-13904063 None:intergenic 40.0%
!!! TTTTGAGACAAACCTGAGTG+GGG - chr7_1:13904639-13904658 Msa1010720:intron 40.0%
! GAAAGAGTGCGTTGTTTACA+TGG - chr7_1:13905398-13905417 Msa1010720:intron 40.0%
AAGCACTTGCAGCATTATTG+GGG + chr7_1:13905557-13905576 None:intergenic 40.0%
ATATCACATAACAGCCTCAC+AGG - chr7_1:13905792-13905811 Msa1010720:intron 40.0%
TAATAAGAAGCCTTCCTGTG+AGG + chr7_1:13905809-13905828 None:intergenic 40.0%
TTACAGAAATGCCCCTTCTT+TGG - chr7_1:13905909-13905928 Msa1010720:intron 40.0%
!!! TCATTTTGGCTCCAAAGAAG+GGG + chr7_1:13905923-13905942 None:intergenic 40.0%
!!! CATCATTTTGGCTCCAAAGA+AGG + chr7_1:13905925-13905944 None:intergenic 40.0%
GCAAACCCTCTAAATCTGAT+TGG + chr7_1:13906020-13906039 None:intergenic 40.0%
! AACTGATAGAAGGGTGTAGA+TGG + chr7_1:13906267-13906286 None:intergenic 40.0%
AGTTTCTATCTGTCTCAGAG+AGG - chr7_1:13906283-13906302 Msa1010720:intron 40.0%
AGGTGAAGATAGACTTCGAT+CGG - chr7_1:13906303-13906322 Msa1010720:intron 40.0%
ATCAAACAGACATGACAGTG+AGG - chr7_1:13906413-13906432 Msa1010720:intron 40.0%
!! TTCAGTGGATTGATTCATCC+TGG - chr7_1:13906788-13906807 Msa1010720:intron 40.0%
AGCGAAGATGAAGATGAAGA+AGG - chr7_1:13906889-13906908 Msa1010720:intron 40.0%
ACTAAAAGGATGACAGGTGT+AGG - chr7_1:13906979-13906998 Msa1010720:intron 40.0%
CTAAAAGGATGACAGGTGTA+GGG - chr7_1:13906980-13906999 Msa1010720:intron 40.0%
CCATCGCCATTATTTCAGTT+TGG + chr7_1:13907065-13907084 None:intergenic 40.0%
CCAAACTGAAATAATGGCGA+TGG - chr7_1:13907062-13907081 Msa1010720:intron 40.0%
CGAATGCTTGTTCTCTTCAA+CGG + chr7_1:13907139-13907158 None:intergenic 40.0%
GAAGAGAACAAGCATTCGAA+TGG - chr7_1:13907141-13907160 Msa1010720:intron 40.0%
GATGAAGCGAGCATTCAATA+TGG - chr7_1:13907163-13907182 Msa1010720:intron 40.0%
TCTGTGTTGTGCATAAAGGA+AGG + chr7_1:13907199-13907218 None:intergenic 40.0%
CGTTTGAATGCAAAGACAGA+AGG + chr7_1:13907259-13907278 None:intergenic 40.0%
ACTGCATCATCATATGTGTG+TGG + chr7_1:13907318-13907337 None:intergenic 40.0%
GAAAACATAATTTGGGGGGT+GGG + chr7_1:13907465-13907484 None:intergenic 40.0%
AGAAAACATAATTTGGGGGG+TGG + chr7_1:13907466-13907485 None:intergenic 40.0%
! CAATCTGAGGCACAAAAGAA+AGG + chr7_1:13907624-13907643 None:intergenic 40.0%
! CTGACATTGAATCTAGCTTG+AGG + chr7_1:13907735-13907754 None:intergenic 40.0%
CTCAAGCTAGATTCAATGTC+AGG - chr7_1:13907733-13907752 Msa1010720:intron 40.0%
AATGTCAGGTAGATTTCACG+AGG - chr7_1:13907747-13907766 Msa1010720:intron 40.0%
CAAGATGACACAATTGGTAG+TGG + chr7_1:13907858-13907877 None:intergenic 40.0%
CACTACCAATTGTGTCATCT+TGG - chr7_1:13907856-13907875 Msa1010720:intron 40.0%
! GCTTAAAGTCATGTGCTGTT+TGG + chr7_1:13907901-13907920 None:intergenic 40.0%
! CCGATTCAATTTTCATCCCT+TGG - chr7_1:13908293-13908312 Msa1010720:intron 40.0%
!! TCCGGTTTTGTCTTTTCTTG+AGG - chr7_1:13908325-13908344 Msa1010720:intron 40.0%
GCCTCAAGAAAAGACAAAAC+CGG + chr7_1:13908329-13908348 None:intergenic 40.0%
! TCTTTTCTTGAGGCTCTTGA+GGG - chr7_1:13908335-13908354 Msa1010720:intron 40.0%
TGTCTATTGTTTCAGGCTGT+TGG - chr7_1:13908463-13908482 Msa1010720:intron 40.0%
TTGCTTGGAGTCATTGTTTG+TGG - chr7_1:13908588-13908607 Msa1010720:intron 40.0%
TTGGAGTCATTGTTTGTGGA+CGG - chr7_1:13908592-13908611 Msa1010720:intron 40.0%
! TCAGCTATGGACTTGGATTT+TGG - chr7_1:13908632-13908651 Msa1010720:intron 40.0%
!!! TAGCTTTGGCCATGCTTTTT+TGG - chr7_1:13908679-13908698 Msa1010720:intron 40.0%
CACCTTATCCAACACGAATA+TGG + chr7_1:13908731-13908750 None:intergenic 40.0%
CTTGGACCGCAAAACAGAAA+TGG - chr7_1:13900604-13900623 Msa1010720:intron 45.0%
CGGCACAGTTAGCTATTTGA+CGG + chr7_1:13900939-13900958 None:intergenic 45.0%
!! GTGTTGATGAAGGTTGGTGT+TGG + chr7_1:13901082-13901101 None:intergenic 45.0%
GGGAAATTCTCGTGTTTCGA+TGG - chr7_1:13901140-13901159 Msa1010720:intron 45.0%
TCCCAGTATCACGAGAATTG+CGG + chr7_1:13901172-13901191 None:intergenic 45.0%
AGATAGTCGACAAGGTCCTT+TGG - chr7_1:13901315-13901334 Msa1010720:intron 45.0%
TTCTATTTCAGTGGCGACGA+CGG - chr7_1:13901379-13901398 Msa1010720:intron 45.0%
GGCGTGTTCGATCCATTAAT+GGG - chr7_1:13901440-13901459 Msa1010720:intron 45.0%
! GTGTTGATGAATGTTGGTGG+TGG - chr7_1:13901991-13902010 Msa1010720:intron 45.0%
AGCTCTGCCCTTAAACCATT+CGG - chr7_1:13902617-13902636 Msa1010720:five_prime_UTR 45.0%
CGATGAGACCGAATGGTTTA+AGG + chr7_1:13902628-13902647 None:intergenic 45.0%
ACATCAATAGAGGCAAGGAG+AGG + chr7_1:13902898-13902917 None:intergenic 45.0%
ATTTGTCATCGCGTCAACAG+TGG - chr7_1:13903105-13903124 Msa1010720:five_prime_UTR 45.0%
!! TAAGTGTTGGCTGAGCTTTG+CGG + chr7_1:13903356-13903375 None:intergenic 45.0%
GCAATCATCACCTTACAAGC+CGG - chr7_1:13903973-13903992 Msa1010720:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr7_1:13903986-13904005 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr7_1:13903983-13904002 Msa1010720:intron 45.0%
AACAGAGTATGCAACGCATG+TGG - chr7_1:13904793-13904812 Msa1010720:intron 45.0%
AGCAAGCAAACACGAGTTGT+TGG + chr7_1:13905096-13905115 None:intergenic 45.0%
ACTAAGTGGAGAGCTACCAA+TGG - chr7_1:13905734-13905753 Msa1010720:intron 45.0%
TGAAGCTTTCCTAGCTCCAT+TGG + chr7_1:13905753-13905772 None:intergenic 45.0%
ATGATCCTAGGGTTTGGCTA+GGG + chr7_1:13905878-13905897 None:intergenic 45.0%
ACCAAGATGATCCTAGGGTT+TGG + chr7_1:13905884-13905903 None:intergenic 45.0%
ATCACACTACTGAAAGCAGC+TGG - chr7_1:13905949-13905968 Msa1010720:intron 45.0%
GCAAACCCTCTAAACCTGAT+TGG + chr7_1:13906052-13906071 None:intergenic 45.0%
CGTGGAGCAAGATATCCTAT+TGG + chr7_1:13906096-13906115 None:intergenic 45.0%
! TGATAGAAGGGTGTAGATGG+TGG + chr7_1:13906264-13906283 None:intergenic 45.0%
!! AAGAAAACTGTCGATTCCGG+CGG - chr7_1:13906332-13906351 Msa1010720:intron 45.0%
ACAGACATGACAGTGAGGTT+AGG - chr7_1:13906418-13906437 Msa1010720:intron 45.0%
CAGACATGACAGTGAGGTTA+GGG - chr7_1:13906419-13906438 Msa1010720:intron 45.0%
AAACACGGTGAGTCTAGACA+CGG - chr7_1:13906454-13906473 Msa1010720:intron 45.0%
GATCGCAGTTCTGCTAAAAG+CGG - chr7_1:13906492-13906511 Msa1010720:intron 45.0%
!! AAAGCGGCAGCAATTTGCTA+AGG - chr7_1:13906508-13906527 Msa1010720:intron 45.0%
GTCTCAGCCTCATTAACACA+TGG - chr7_1:13906699-13906718 Msa1010720:intron 45.0%
TCTTCGATCCATCCAATTCG+TGG + chr7_1:13906944-13906963 None:intergenic 45.0%
CAGGTGACTAAAAGGATGAC+AGG - chr7_1:13906973-13906992 Msa1010720:intron 45.0%
GAAGCGAGCATTCAATATGG+TGG - chr7_1:13907166-13907185 Msa1010720:intron 45.0%
! TACAACCCTTCGGTTTGAGA+TGG - chr7_1:13907535-13907554 Msa1010720:intron 45.0%
! GTTTGAGATGGTGCACTAGA+CGG - chr7_1:13907547-13907566 Msa1010720:intron 45.0%
GCTGACCAAGATGACACAAT+TGG + chr7_1:13907864-13907883 None:intergenic 45.0%
ATCCCTTGGCAAACAAGTTC+CGG - chr7_1:13908307-13908326 Msa1010720:intron 45.0%
! AACCGGAACTTGTTTGCCAA+GGG + chr7_1:13908312-13908331 None:intergenic 45.0%
! AAACCGGAACTTGTTTGCCA+AGG + chr7_1:13908313-13908332 None:intergenic 45.0%
! GTCTTTTCTTGAGGCTCTTG+AGG - chr7_1:13908334-13908353 Msa1010720:intron 45.0%
TTGTATGGACTCCTCAGACT+TGG + chr7_1:13908369-13908388 None:intergenic 45.0%
GGAGTCCATACAAGATGATC+AGG - chr7_1:13908376-13908395 Msa1010720:intron 45.0%
! ATTGTTTCAGGCTGTTGGCT+CGG - chr7_1:13908468-13908487 Msa1010720:intron 45.0%
!!! TTTTGGGCCTGTTTTAGCTG+TGG - chr7_1:13908555-13908574 Msa1010720:intron 45.0%
!!! TGGCCATGCTTTTTTGGTTG+TGG - chr7_1:13908685-13908704 Msa1010720:intron 45.0%
CTACTTCGCCATATTCGTGT+TGG - chr7_1:13908720-13908739 Msa1010720:five_prime_UTR 45.0%
CGCCATATTCGTGTTGGATA+AGG - chr7_1:13908726-13908745 Msa1010720:five_prime_UTR 45.0%
!!! AAAATTATATTTTTTCTTTA+GGG + chr7_1:13900137-13900156 None:intergenic 5.0%
!!! AAAAATTATATTTTTTCTTT+AGG + chr7_1:13900138-13900157 None:intergenic 5.0%
!!! GTTTTATAAAATAAATTTTT+TGG + chr7_1:13900315-13900334 None:intergenic 5.0%
!!! TTTTTTTTTAAATGAAAAAA+TGG + chr7_1:13900972-13900991 None:intergenic 5.0%
!!! AATTTTATAAAAAAAATAAG+TGG + chr7_1:13903284-13903303 None:intergenic 5.0%
!! TGATGAAGGTTGGTGTTGGC+TGG + chr7_1:13901078-13901097 None:intergenic 50.0%
GCCGCAATTCTCGTGATACT+GGG - chr7_1:13901168-13901187 Msa1010720:intron 50.0%
! TCGACAAGGTCCTTTGGCTT+GGG - chr7_1:13901321-13901340 Msa1010720:intron 50.0%
TTTACCCTCTCCCAAGCCAA+AGG + chr7_1:13901334-13901353 None:intergenic 50.0%
!! TTTGGCTTGGGAGAGGGTAA+AGG - chr7_1:13901333-13901352 Msa1010720:intron 50.0%
CGGCGTGTTCGATCCATTAA+TGG - chr7_1:13901439-13901458 Msa1010720:intron 50.0%
! CACGGTGTGGCATTTTGCAT+CGG - chr7_1:13902757-13902776 Msa1010720:five_prime_UTR 50.0%
! ACGGTGTGGCATTTTGCATC+GGG - chr7_1:13902758-13902777 Msa1010720:five_prime_UTR 50.0%
CAATAGAGGCAAGGAGAGGA+GGG + chr7_1:13902894-13902913 None:intergenic 50.0%
TCAATAGAGGCAAGGAGAGG+AGG + chr7_1:13902895-13902914 None:intergenic 50.0%
CAGTTAAACGACGACGTCCT+CGG - chr7_1:13903863-13903882 Msa1010720:intron 50.0%
CACATAACAGCCTCACAGGA+AGG - chr7_1:13905796-13905815 Msa1010720:intron 50.0%
GATGATCCTAGGGTTTGGCT+AGG + chr7_1:13905879-13905898 None:intergenic 50.0%
GCCAAACCCTAGGATCATCT+TGG - chr7_1:13905880-13905899 Msa1010720:intron 50.0%
! AGAAGGGTGTAGATGGTGGT+GGG + chr7_1:13906260-13906279 None:intergenic 50.0%
! TAGAAGGGTGTAGATGGTGG+TGG + chr7_1:13906261-13906280 None:intergenic 50.0%
CAGAACTGCGATCAGAGCAA+CGG + chr7_1:13906485-13906504 None:intergenic 50.0%
GCAACAGTGAGAGGAGATTG+CGG - chr7_1:13906623-13906642 Msa1010720:intron 50.0%
AGGGAATCGGGTGGAGTTAA+CGG - chr7_1:13906656-13906675 Msa1010720:intron 50.0%
AATCGGGTGGAGTTAACGGA+GGG - chr7_1:13906660-13906679 Msa1010720:intron 50.0%
TGGAGTTAACGGAGGGAGAT+AGG - chr7_1:13906667-13906686 Msa1010720:intron 50.0%
GGAGTTAACGGAGGGAGATA+GGG - chr7_1:13906668-13906687 Msa1010720:intron 50.0%
GGATGGATCGAAGACTGTAG+CGG - chr7_1:13906950-13906969 Msa1010720:intron 50.0%
TGTAGCGGCAGGTGACTAAA+AGG - chr7_1:13906965-13906984 Msa1010720:intron 50.0%
GCGAGCATTCAATATGGTGG+AGG - chr7_1:13907169-13907188 Msa1010720:intron 50.0%
GTGCACCATCTCAAACCGAA+GGG + chr7_1:13907543-13907562 None:intergenic 50.0%
AGTGCACCATCTCAAACCGA+AGG + chr7_1:13907544-13907563 None:intergenic 50.0%
GGGTTCTGTTTCCAAGTCTG+AGG - chr7_1:13908355-13908374 Msa1010720:intron 50.0%
TCATTGTTTGTGGACGGCTG+TGG - chr7_1:13908598-13908617 Msa1010720:intron 50.0%
CATTGTTTGTGGACGGCTGT+GGG - chr7_1:13908599-13908618 Msa1010720:intron 50.0%
TAGTGGCTCAGCTATGGACT+TGG - chr7_1:13908625-13908644 Msa1010720:intron 50.0%
! TGTTGGCTGGAAGTAGGTGG+TGG + chr7_1:13901065-13901084 None:intergenic 55.0%
!! TGGTGTTGGCTGGAAGTAGG+TGG + chr7_1:13901068-13901087 None:intergenic 55.0%
!! GGTTGGTGTTGGCTGGAAGT+AGG + chr7_1:13901071-13901090 None:intergenic 55.0%
CGCCGCAATTCTCGTGATAC+TGG - chr7_1:13901167-13901186 Msa1010720:intron 55.0%
CTCGACGACGGAAACTTCAG+CGG - chr7_1:13901227-13901246 Msa1010720:intron 55.0%
GTCGACAAGGTCCTTTGGCT+TGG - chr7_1:13901320-13901339 Msa1010720:intron 55.0%
!! AAGGTCCTTTGGCTTGGGAG+AGG - chr7_1:13901326-13901345 Msa1010720:intron 55.0%
!! AGGTCCTTTGGCTTGGGAGA+GGG - chr7_1:13901327-13901346 Msa1010720:intron 55.0%
AGATGGGACGGAGATGAGTG+CGG - chr7_1:13901402-13901421 Msa1010720:intron 55.0%
TGACGCACGATGAGACCGAA+TGG + chr7_1:13902635-13902654 None:intergenic 55.0%
GTGAGGAAGACATCACGGTG+TGG - chr7_1:13902744-13902763 Msa1010720:five_prime_UTR 55.0%
GGAGAGCTACCAATGGAGCT+AGG - chr7_1:13905741-13905760 Msa1010720:intron 55.0%
CCTAGGGTTTGGCTAGGGTT+TGG + chr7_1:13905873-13905892 None:intergenic 55.0%
CCAAACCCTAGCCAAACCCT+AGG - chr7_1:13905870-13905889 Msa1010720:intron 55.0%
! TAACAGGGACGGTGGTGGTA+GGG + chr7_1:13906190-13906209 None:intergenic 55.0%
! ATAACAGGGACGGTGGTGGT+AGG + chr7_1:13906191-13906210 None:intergenic 55.0%
GAAAGGGGAGAAGGAAGGAG+AGG + chr7_1:13906227-13906246 None:intergenic 55.0%
CTCACGAAAGGGGAGAAGGA+AGG + chr7_1:13906232-13906251 None:intergenic 55.0%
CTTCCTTCTCCCCTTTCGTG+AGG - chr7_1:13906230-13906249 Msa1010720:intron 55.0%
! GAAGGGTGTAGATGGTGGTG+GGG + chr7_1:13906259-13906278 None:intergenic 55.0%
!! AAAACTGTCGATTCCGGCGG+TGG - chr7_1:13906335-13906354 Msa1010720:intron 55.0%
AGTGGCAACGCAACAGTGAG+AGG - chr7_1:13906614-13906633 Msa1010720:intron 55.0%
ACAGTGAGAGGAGATTGCGG+TGG - chr7_1:13906626-13906645 Msa1010720:intron 55.0%
! AGATTGCGGTGGTGGTGAGA+GGG - chr7_1:13906637-13906656 Msa1010720:intron 55.0%
GAATCGGGTGGAGTTAACGG+AGG - chr7_1:13906659-13906678 Msa1010720:intron 55.0%
!!! CAGGCTGTTGGCTCGGTTTT+AGG - chr7_1:13908475-13908494 Msa1010720:intron 55.0%
!!! CTCGGTTTTAGGCTGCTGTC+AGG - chr7_1:13908486-13908505 Msa1010720:intron 55.0%
! CCTGCTGCGCAGTGGTTTTT+GGG - chr7_1:13908539-13908558 Msa1010720:intron 55.0%
GCAGCTGCCACAGCTAAAAC+AGG + chr7_1:13908565-13908584 None:intergenic 55.0%
! TGTGGCAGCTGCTGTTTGCT+TGG - chr7_1:13908573-13908592 Msa1010720:intron 55.0%
!! GTAGGTGGTGGTGGGGTTTG+AGG + chr7_1:13901053-13901072 None:intergenic 60.0%
! GCTGGAAGTAGGTGGTGGTG+GGG + chr7_1:13901060-13901079 None:intergenic 60.0%
! GGCTGGAAGTAGGTGGTGGT+GGG + chr7_1:13901061-13901080 None:intergenic 60.0%
! TGGCTGGAAGTAGGTGGTGG+TGG + chr7_1:13901062-13901081 None:intergenic 60.0%
CGCTGAAGTTTCCGTCGTCG+AGG + chr7_1:13901229-13901248 None:intergenic 60.0%
GACGACGGAAACTTCAGCGG+CGG - chr7_1:13901230-13901249 Msa1010720:intron 60.0%
ACGACGGAAACTTCAGCGGC+GGG - chr7_1:13901231-13901250 Msa1010720:intron 60.0%
TTCAGTGGCGACGACGGAGA+TGG - chr7_1:13901385-13901404 Msa1010720:intron 60.0%
TCAGTGGCGACGACGGAGAT+GGG - chr7_1:13901386-13901405 Msa1010720:intron 60.0%
GAGATGAGTGCGGTGGGAGA+TGG - chr7_1:13901412-13901431 Msa1010720:intron 60.0%
!! TGTTGGTGGTGGCTCGAAGC+AGG - chr7_1:13902002-13902021 Msa1010720:intron 60.0%
TGGTGGTAGGGGGAGAACAG+GGG + chr7_1:13906178-13906197 None:intergenic 60.0%
GTGGTGGTAGGGGGAGAACA+GGG + chr7_1:13906179-13906198 None:intergenic 60.0%
! AACAGGGACGGTGGTGGTAG+GGG + chr7_1:13906189-13906208 None:intergenic 60.0%
CCACCACCGTCCCTGTTATC+CGG - chr7_1:13906192-13906211 Msa1010720:intron 60.0%
! GAAGGAAGGAGAGGTGGTGG+CGG + chr7_1:13906218-13906237 None:intergenic 60.0%
GGAGAAGGAAGGAGAGGTGG+TGG + chr7_1:13906221-13906240 None:intergenic 60.0%
AGGGGAGAAGGAAGGAGAGG+TGG + chr7_1:13906224-13906243 None:intergenic 60.0%
TGGCCTCACGAAAGGGGAGA+AGG + chr7_1:13906236-13906255 None:intergenic 60.0%
CACGGTGAGTCTAGACACGG+CGG - chr7_1:13906457-13906476 Msa1010720:intron 60.0%
GTGAGAGGAGATTGCGGTGG+TGG - chr7_1:13906629-13906648 Msa1010720:intron 60.0%
! GAGATTGCGGTGGTGGTGAG+AGG - chr7_1:13906636-13906655 Msa1010720:intron 60.0%
! CGGTGGTGGTGAGAGGGAAT+CGG - chr7_1:13906643-13906662 Msa1010720:intron 60.0%
! GGTGGTGGTGAGAGGGAATC+GGG - chr7_1:13906644-13906663 Msa1010720:intron 60.0%
GGATCGAAGACTGTAGCGGC+AGG - chr7_1:13906954-13906973 Msa1010720:intron 60.0%
CGGTCGCTTGCACGATGCTA+TGG + chr7_1:13907119-13907138 None:intergenic 60.0%
! TGTTTCTGCCTGCTGCGCAG+TGG - chr7_1:13908531-13908550 Msa1010720:intron 60.0%
! GCCTGCTGCGCAGTGGTTTT+TGG - chr7_1:13908538-13908557 Msa1010720:intron 60.0%
CCCAAAAACCACTGCGCAGC+AGG + chr7_1:13908542-13908561 None:intergenic 60.0%
TGTTTGTGGACGGCTGTGGG+AGG - chr7_1:13908602-13908621 Msa1010720:intron 60.0%
! GGGAGGTAGTGGCTCAGCTA+TGG - chr7_1:13908619-13908638 Msa1010720:intron 60.0%
GGCGGATGGTGCGAAGGAAG+CGG - chr7_1:13901269-13901288 Msa1010720:intron 65.0%
TGGCGACGACGGAGATGGGA+CGG - chr7_1:13901390-13901409 Msa1010720:intron 65.0%
TGGGACGGAGATGAGTGCGG+TGG - chr7_1:13901405-13901424 Msa1010720:intron 65.0%
GGGACGGAGATGAGTGCGGT+GGG - chr7_1:13901406-13901425 Msa1010720:intron 65.0%
GTGCGGTGGGAGATGGACGA+CGG - chr7_1:13901419-13901438 Msa1010720:intron 65.0%
!! TGGTGGTGGCTCGAAGCAGG+TGG - chr7_1:13902005-13902024 Msa1010720:intron 65.0%
TGGTGGCTCGAAGCAGGTGG+TGG - chr7_1:13902008-13902027 Msa1010720:five_prime_UTR 65.0%
! TGGCTCGAAGCAGGTGGTGG+TGG - chr7_1:13902011-13902030 Msa1010720:five_prime_UTR 65.0%
! GGTGGTGGTAGGGGGAGAAC+AGG + chr7_1:13906180-13906199 None:intergenic 65.0%
! ACAGGGACGGTGGTGGTAGG+GGG + chr7_1:13906188-13906207 None:intergenic 65.0%
CCGGATAACAGGGACGGTGG+TGG + chr7_1:13906195-13906214 None:intergenic 65.0%
TGGCGGCCGGATAACAGGGA+CGG + chr7_1:13906201-13906220 None:intergenic 65.0%
!! GTGGTGGCGGCCGGATAACA+GGG + chr7_1:13906205-13906224 None:intergenic 65.0%
GTGGGGTGGCCTCACGAAAG+GGG + chr7_1:13906242-13906261 None:intergenic 65.0%
GGTGGGGTGGCCTCACGAAA+GGG + chr7_1:13906243-13906262 None:intergenic 65.0%
TGGTGGGGTGGCCTCACGAA+AGG + chr7_1:13906244-13906263 None:intergenic 65.0%
!! GGGTGTAGATGGTGGTGGGG+TGG + chr7_1:13906256-13906275 None:intergenic 65.0%
GGTGGTGAGAGGGAATCGGG+TGG - chr7_1:13906647-13906666 Msa1010720:intron 65.0%
TGGACGGCTGTGGGAGGTAG+TGG - chr7_1:13908608-13908627 Msa1010720:intron 65.0%
CGGCCGGATAACAGGGACGG+TGG + chr7_1:13906198-13906217 None:intergenic 70.0%
!! GGTGGTGGCGGCCGGATAAC+AGG + chr7_1:13906206-13906225 None:intergenic 70.0%
!! GAAGGAGAGGTGGTGGCGGC+CGG + chr7_1:13906214-13906233 None:intergenic 70.0%
! GTCGATTCCGGCGGTGGCAG+CGG - chr7_1:13906341-13906360 Msa1010720:intron 70.0%
CTTCAGCGGCGGGCGCAGCA+AGG - chr7_1:13901241-13901260 Msa1010720:intron 75.0%
AGCGGCGGGCGCAGCAAGGA+CGG - chr7_1:13901245-13901264 Msa1010720:intron 75.0%
GCAGCAAGGACGGCGGCGGA+TGG - chr7_1:13901255-13901274 Msa1010720:intron 75.0%
GACGGCGGCGGATGGTGCGA+AGG - chr7_1:13901263-13901282 Msa1010720:intron 75.0%
TCCTCGTCCGCTGCCACCGC+CGG + chr7_1:13906351-13906370 None:intergenic 75.0%
! GGCGGGCGCAGCAAGGACGG+CGG - chr7_1:13901248-13901267 Msa1010720:intron 80.0%
! GGGCGCAGCAAGGACGGCGG+CGG - chr7_1:13901251-13901270 Msa1010720:intron 80.0%
! TCCGGCGGTGGCAGCGGACG+AGG - chr7_1:13906347-13906366 Msa1010720:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 13899989 13908756 13899989 ID=Msa1010720;Name=Msa1010720
chr7_1 mRNA 13899989 13908756 13899989 ID=Msa1010720-mRNA-1;Parent=Msa1010720;Name=Msa1010720-mRNA-1;_AED=0.36;_eAED=0.36;_QI=1499|0.71|0.62|1|0.57|0.62|8|0|182
chr7_1 exon 13899989 13900028 13899989 ID=Msa1010720-mRNA-1:exon:3609;Parent=Msa1010720-mRNA-1
chr7_1 exon 13900122 13900248 13900122 ID=Msa1010720-mRNA-1:exon:3608;Parent=Msa1010720-mRNA-1
chr7_1 exon 13900314 13900509 13900314 ID=Msa1010720-mRNA-1:exon:3607;Parent=Msa1010720-mRNA-1
chr7_1 exon 13900669 13900721 13900669 ID=Msa1010720-mRNA-1:exon:3606;Parent=Msa1010720-mRNA-1
chr7_1 exon 13901498 13901623 13901498 ID=Msa1010720-mRNA-1:exon:3605;Parent=Msa1010720-mRNA-1
chr7_1 exon 13901751 13901884 13901751 ID=Msa1010720-mRNA-1:exon:3604;Parent=Msa1010720-mRNA-1
chr7_1 exon 13902008 13903319 13902008 ID=Msa1010720-mRNA-1:exon:3603;Parent=Msa1010720-mRNA-1
chr7_1 exon 13908697 13908756 13908697 ID=Msa1010720-mRNA-1:exon:3602;Parent=Msa1010720-mRNA-1
chr7_1 five_prime_UTR 13908697 13908756 13908697 ID=Msa1010720-mRNA-1:five_prime_utr;Parent=Msa1010720-mRNA-1
chr7_1 five_prime_UTR 13902008 13903319 13902008 ID=Msa1010720-mRNA-1:five_prime_utr;Parent=Msa1010720-mRNA-1
chr7_1 five_prime_UTR 13901758 13901884 13901758 ID=Msa1010720-mRNA-1:five_prime_utr;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13901751 13901757 13901751 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13901498 13901623 13901498 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13900669 13900721 13900669 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13900314 13900509 13900314 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13900122 13900248 13900122 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
chr7_1 CDS 13899989 13900028 13899989 ID=Msa1010720-mRNA-1:cds;Parent=Msa1010720-mRNA-1
Gene Sequence

>Msa1010720

ATGACAGCATCGTGCAAGCGACCGTTGAAGAGAACAAGCATTCGAATGGATGAAGCGAGCATTCAATATGGTGGAGGCAAGCCTTCCTTTATGCACAACACAGATAGACATCCATTACATGACAATACAACTGGTGGTTTGAAAAAGACAGAGATTCGTCTCAGTTTGATATTGATCCAAGTAAATAATAAGGAAACAAAAAGTAAAGAAATTTGGCTCATTTGTCTCGATTATGTGATATTGCCGATTCAATTTTCATCCCTTGGCAAACAAGTTCCGGTTTTGTCTTTTCTTGAGGCTCTTGAGGGTTCTGTTTCCAAGTCTGAGGAGTCCATACAAGATGATCAGGATTTAAGATCTCAATCTTCTAACAATCATGGCTGCTGCTGTCAGGACAGAACAGCAGCTGTTGATGATGTTTCTGCCTGCTGCGCAGTGGTTTTTGGGCCTGTTTTAGCTGTGGCAGCTGCTGTTTGCTTGGAGTCATTGTTTGTGGACGGCTGTGGGAGGGGCTACTTCGCCATATTCGTGTTGGATAAGGTGACGTAG

Protein sequence

>Msa1010720

MTASCKRPLKRTSIRMDEASIQYGGGKPSFMHNTDRHPLHDNTTGGLKKTEIRLSLILIQVNNKETKSKEIWLICLDYVILPIQFSSLGKQVPVLSFLEALEGSVSKSEESIQDDQDLRSQSSNNHGCCCQDRTAAVDDVSACCAVVFGPVLAVAAAVCLESLFVDGCGRGYFAIFVLDKVT*