Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0212750 | Msa0285060 | -0.809125 | 2.208334e-50 | -8.615850e-47 |
| Msa0285060 | Msa0607510 | 0.808474 | 3.043214e-50 | -8.615850e-47 |
| Msa0285060 | Msa0693790 | 0.830655 | 2.599090e-55 | -8.615850e-47 |
| Msa0285060 | Msa0724760 | 0.889747 | 1.836138e-73 | -8.615850e-47 |
| Msa0285060 | Msa0940830 | 0.804951 | 1.688038e-49 | -8.615850e-47 |
| Msa0285060 | Msa1010720 | 0.901392 | 2.805722e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 137 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCTATGGACTTGGATTT+TGG | 0.210628 | 2_3:-24216302 | Msa0285060:three_prime_UTR |
| AGGGAATCGGGTGGAGTTAA+TGG | 0.224229 | 2_3:-24218278 | Msa0285060:five_prime_UTR |
| TTACAGAAATGCCCCTTCTT+TGG | 0.261089 | 2_3:-24219025 | Msa0285060:five_prime_UTR |
| GGTGGTGGCGGCCGGATAAC+AGG | 0.269132 | 2_3:+24218731 | None:intergenic |
| TCAATTCTTTCTTCTTGTTT+CGG | 0.280053 | 2_3:+24218560 | None:intergenic |
| GAAGAACAAAATGCTGAGTT+TGG | 0.307400 | 2_3:+24215912 | None:intergenic |
| ACATGGTAATCAATCTTTAC+AGG | 0.316120 | 2_3:-24218218 | Msa0285060:intron |
| CCTAGGGTTTGGCTAGGGTT+TGG | 0.322311 | 2_3:+24219064 | None:intergenic |
| CGCCGTATTCGTGTTGGATA+AGG | 0.324761 | 2_3:-24216208 | Msa0285060:three_prime_UTR |
| GGAGAAGGAAGGAGAGGTGG+TGG | 0.338181 | 2_3:+24218716 | None:intergenic |
| TGGAGTTAATGGAGGGAGAT+AGG | 0.343822 | 2_3:-24218267 | Msa0285060:five_prime_UTR |
| AATTAGCCAATCAGATTTAG+AGG | 0.348061 | 2_3:-24218923 | Msa0285060:five_prime_UTR |
| AACTGATAGAAGGGTGTAGA+TGG | 0.360633 | 2_3:+24218670 | None:intergenic |
| TGTCTATTGTTTCAGGCTGT+TGG | 0.360762 | 2_3:-24216471 | Msa0285060:intron |
| GAATTTATTGAACCACGAAT+TGG | 0.362261 | 2_3:-24218005 | Msa0285060:five_prime_UTR |
| AAGGTGACGTAGTTGTGTTT+TGG | 0.362369 | 2_3:-24216189 | Msa0285060:three_prime_UTR |
| CGGTGGTGGTGAGAGGGAAT+CGG | 0.367793 | 2_3:-24218291 | Msa0285060:five_prime_UTR |
| AACAGGGACGGTGGTGGTAG+GGG | 0.370468 | 2_3:+24218748 | None:intergenic |
| TGTAGCGGCAGGTGACTAAA+AGG | 0.370894 | 2_3:-24217969 | Msa0285060:five_prime_UTR |
| GACAAAGAGAAACTGATAGA+AGG | 0.374086 | 2_3:+24218660 | None:intergenic |
| TAACAACCAATCAGGTTTAG+AGG | 0.381706 | 2_3:-24218891 | Msa0285060:five_prime_UTR |
| CAGACATGACAGTGAGGTTA+GGG | 0.391855 | 2_3:-24218515 | Msa0285060:five_prime_UTR |
| ATCCCTTGGCAAACAAGTTC+CGG | 0.394223 | 2_3:-24216627 | Msa0285060:CDS |
| TATTGAGATGAGATGTTTCA+AGG | 0.399668 | 2_3:-24215965 | Msa0285060:three_prime_UTR |
| ACTACACACTTACATTTACT+TGG | 0.404350 | 2_3:+24216867 | None:intergenic |
| GCAGCTGCCACGGCTAAAAC+AGG | 0.406198 | 2_3:+24216372 | None:intergenic |
| ACAGACATGACAGTGAGGTT+AGG | 0.407777 | 2_3:-24218516 | Msa0285060:five_prime_UTR |
| TCCGGTGGTGGCAGCGGACG+AGG | 0.409350 | 2_3:-24218587 | Msa0285060:five_prime_UTR |
| GAAGGAGAGGTGGTGGCGGC+CGG | 0.416526 | 2_3:+24218723 | None:intergenic |
| TGGGTGGATGTTACGCCTAT+AGG | 0.421369 | 2_3:-24216169 | Msa0285060:three_prime_UTR |
| TCCTCGTCCGCTGCCACCAC+CGG | 0.427553 | 2_3:+24218586 | None:intergenic |
| GGTGGGGTGGCCTCACGAAA+GGG | 0.427675 | 2_3:+24218694 | None:intergenic |
| TTTGCAAGTAACAACCAATC+AGG | 0.428775 | 2_3:-24218899 | Msa0285060:five_prime_UTR |
| AGTGTGATATCACATCATTT+TGG | 0.429284 | 2_3:+24219000 | None:intergenic |
| TAGTTGTGTTTGTCTTGAAT+TGG | 0.429851 | 2_3:+24218962 | None:intergenic |
| CAATACAAAATGCCGCCTAT+AGG | 0.430621 | 2_3:+24216154 | None:intergenic |
| CGTGGCAGCTGCTGTTTGCT+TGG | 0.431024 | 2_3:-24216361 | Msa0285060:CDS |
| AGATTTCAAAGTCATAGCTT+TGG | 0.431434 | 2_3:-24216269 | Msa0285060:three_prime_UTR |
| TGAAAGAAAACTGTCGATTC+CGG | 0.437099 | 2_3:-24218605 | Msa0285060:five_prime_UTR |
| ACCAAGATGATCCTAGGGTT+TGG | 0.437500 | 2_3:+24219053 | None:intergenic |
| CACCTTATCCAACACGAATA+CGG | 0.443441 | 2_3:+24216206 | None:intergenic |
| CCATTACATGACAATACAAC+TGG | 0.444073 | 2_3:-24217708 | Msa0285060:intron |
| CAACAGCAAAATAAACCAAT+AGG | 0.444143 | 2_3:-24218856 | Msa0285060:five_prime_UTR |
| TAAATCCTGATCATCTTGTA+TGG | 0.445839 | 2_3:+24216553 | None:intergenic |
| GTCGATTCCGGTGGTGGCAG+CGG | 0.446713 | 2_3:-24218593 | Msa0285060:five_prime_UTR |
| ACAGGGACGGTGGTGGTAGG+GGG | 0.447718 | 2_3:+24218749 | None:intergenic |
| CCACCACCGTCCCTGTTATC+CGG | 0.450002 | 2_3:-24218742 | Msa0285060:five_prime_UTR |
| GGTGGTGGTGAGAGGGAATC+GGG | 0.451690 | 2_3:-24218290 | Msa0285060:five_prime_UTR |
| TGGACGGCTGTGGGAGGTAG+TGG | 0.452062 | 2_3:-24216326 | Msa0285060:exon |
| GTGGGGTGGCCTCACGAAAG+GGG | 0.454471 | 2_3:+24218695 | None:intergenic |
| GCAAACCCTCTAAACCTGAT+TGG | 0.455963 | 2_3:+24218885 | None:intergenic |
| TAACAGGGACGGTGGTGGTA+GGG | 0.456102 | 2_3:+24218747 | None:intergenic |
| TTGCTTGGAGTCATTGTTTG+TGG | 0.456662 | 2_3:-24216346 | Msa0285060:CDS |
| TCTATCTGTGTTGTGCATAA+AGG | 0.457460 | 2_3:+24217734 | None:intergenic |
| CGTGGAGCAAGATATCCTAT+TGG | 0.459264 | 2_3:+24218841 | None:intergenic |
| CCAGTTGTATTGTCATGTAA+TGG | 0.460265 | 2_3:+24217708 | None:intergenic |
| GATGAAGCGAGCATTCAATA+TGG | 0.460356 | 2_3:-24217771 | Msa0285060:CDS |
| ACAGTTAGCTACAAATGTTT+CGG | 0.466433 | 2_3:-24218077 | Msa0285060:intron |
| GGAGTCCATACAAGATGATC+AGG | 0.470741 | 2_3:-24216558 | Msa0285060:CDS |
| CCAAGGGATGAAAATTGAAT+CGG | 0.474238 | 2_3:+24216641 | None:intergenic |
| ATTGTTTCAGGCTGTTGGCT+CGG | 0.477917 | 2_3:-24216466 | Msa0285060:intron |
| GAGATTGCGGTGGTGGTGAG+AGG | 0.479011 | 2_3:-24218298 | Msa0285060:five_prime_UTR |
| GGAGTTAATGGAGGGAGATA+GGG | 0.480388 | 2_3:-24218266 | Msa0285060:five_prime_UTR |
| ATAACAGGGACGGTGGTGGT+AGG | 0.481221 | 2_3:+24218746 | None:intergenic |
| GCCTCAAGAAAAGACAAAAC+CGG | 0.481492 | 2_3:+24216608 | None:intergenic |
| GCCAAACCCTAGGATCATCT+TGG | 0.484423 | 2_3:-24219054 | Msa0285060:five_prime_UTR |
| GGGAGGTAGTGGCTCAGCTA+TGG | 0.486001 | 2_3:-24216315 | Msa0285060:exon |
| CGAATGCTTGTTCTCTTCAA+CGG | 0.486683 | 2_3:+24217798 | None:intergenic |
| TAGAAGGGTGTAGATGGTGG+TGG | 0.487186 | 2_3:+24218676 | None:intergenic |
| TGGTGGGGTGGCCTCACGAA+AGG | 0.488038 | 2_3:+24218693 | None:intergenic |
| GCAAACCCTCTAAATCTGAT+TGG | 0.490797 | 2_3:+24218917 | None:intergenic |
| TCTCAATCTTCTAACAATCA+TGG | 0.491896 | 2_3:-24216527 | Msa0285060:CDS |
| AGGGGAGAAGGAAGGAGAGG+TGG | 0.492140 | 2_3:+24218713 | None:intergenic |
| GGGTGTAGATGGTGGTGGGG+TGG | 0.495602 | 2_3:+24218681 | None:intergenic |
| TCTTCGATCCATCCAATTCG+TGG | 0.502069 | 2_3:+24217993 | None:intergenic |
| AAAACTGTCGATTCCGGTGG+TGG | 0.502242 | 2_3:-24218599 | Msa0285060:five_prime_UTR |
| GAAGGAAGGAGAGGTGGTGG+CGG | 0.517801 | 2_3:+24218719 | None:intergenic |
| TAGTGGCTCAGCTATGGACT+TGG | 0.520229 | 2_3:-24216309 | Msa0285060:three_prime_UTR |
| GTGAGAGGAGATTGCGGTGG+TGG | 0.521700 | 2_3:-24218305 | Msa0285060:five_prime_UTR |
| GGGTTCTGTTTCCAAGTCTG+AGG | 0.521871 | 2_3:-24216579 | Msa0285060:CDS |
| TCATTGTTTGTGGACGGCTG+TGG | 0.523974 | 2_3:-24216336 | Msa0285060:CDS |
| AGAAGGGTGTAGATGGTGGT+GGG | 0.524240 | 2_3:+24218677 | None:intergenic |
| CCGGATAACAGGGACGGTGG+TGG | 0.527395 | 2_3:+24218742 | None:intergenic |
| TGGCCTCACGAAAGGGGAGA+AGG | 0.527728 | 2_3:+24218701 | None:intergenic |
| AACAACCAATCAGGTTTAGA+GGG | 0.532548 | 2_3:-24218890 | Msa0285060:five_prime_UTR |
| CATTGTTTGTGGACGGCTGT+GGG | 0.540531 | 2_3:-24216335 | Msa0285060:CDS |
| ACAAAGAGAAACTGATAGAA+GGG | 0.540688 | 2_3:+24218661 | None:intergenic |
| GTGGTGGCGGCCGGATAACA+GGG | 0.541415 | 2_3:+24218732 | None:intergenic |
| CAGGTGACTAAAAGGATGAC+AGG | 0.545138 | 2_3:-24217961 | Msa0285060:intron |
| TTGGAGTCATTGTTTGTGGA+CGG | 0.547119 | 2_3:-24216342 | Msa0285060:CDS |
| GATGATCCTAGGGTTTGGCT+AGG | 0.551283 | 2_3:+24219058 | None:intergenic |
| AGGTGAAGATAGACTTCGAT+CGG | 0.552049 | 2_3:-24218631 | Msa0285060:five_prime_UTR |
| CTTCCTTCTCCCCTTTCGTG+AGG | 0.555775 | 2_3:-24218704 | Msa0285060:five_prime_UTR |
| ATGATCCTAGGGTTTGGCTA+GGG | 0.559063 | 2_3:+24219059 | None:intergenic |
| CTACTTCGCCGTATTCGTGT+TGG | 0.559336 | 2_3:-24216214 | Msa0285060:three_prime_UTR |
| TTGTATGGACTCCTCAGACT+TGG | 0.559896 | 2_3:+24216568 | None:intergenic |
| TTGATTACCATGTGTTAATG+AGG | 0.564366 | 2_3:+24218228 | None:intergenic |
| CAAGCAAACAGCAGCTGCCA+CGG | 0.565386 | 2_3:+24216362 | None:intergenic |
| AGATTGCGGTGGTGGTGAGA+GGG | 0.567430 | 2_3:-24218297 | Msa0285060:five_prime_UTR |
| AAACCGGAACTTGTTTGCCA+AGG | 0.570618 | 2_3:+24216624 | None:intergenic |
| GGATCGAAGACTGTAGCGGC+AGG | 0.571068 | 2_3:-24217980 | Msa0285060:five_prime_UTR |
| AACCGGAACTTGTTTGCCAA+GGG | 0.574258 | 2_3:+24216625 | None:intergenic |
| GAATCGGGTGGAGTTAATGG+AGG | 0.577635 | 2_3:-24218275 | Msa0285060:five_prime_UTR |
| TCAATTTAGTTTCAACGCAG+TGG | 0.581645 | 2_3:-24218338 | Msa0285060:intron |
| ATCACACTACTGAAAGCAGC+TGG | 0.584544 | 2_3:-24218985 | Msa0285060:five_prime_UTR |
| GAAGGGTGTAGATGGTGGTG+GGG | 0.584914 | 2_3:+24218678 | None:intergenic |
| AGTGGCAACGCAACAGTGAG+AGG | 0.590007 | 2_3:-24218320 | Msa0285060:five_prime_UTR |
| ATTAGCCAATCAGATTTAGA+GGG | 0.590451 | 2_3:-24218922 | Msa0285060:five_prime_UTR |
| AGCGAAGATGAAGATGAAGA+AGG | 0.592403 | 2_3:-24218045 | Msa0285060:five_prime_UTR |
| CTCACGAAAGGGGAGAAGGA+AGG | 0.593511 | 2_3:+24218705 | None:intergenic |
| TTATTGAACCACGAATTGGA+TGG | 0.600940 | 2_3:-24218001 | Msa0285060:five_prime_UTR |
| GCGAGCATTCAATATGGTGG+AGG | 0.602271 | 2_3:-24217765 | Msa0285060:CDS |
| GAAGAGAACAAGCATTCGAA+TGG | 0.606719 | 2_3:-24217793 | Msa0285060:CDS |
| CCAAACCCTAGCCAAACCCT+AGG | 0.611987 | 2_3:-24219064 | Msa0285060:five_prime_UTR |
| GGTGGTGAGAGGGAATCGGG+TGG | 0.617114 | 2_3:-24218287 | Msa0285060:five_prime_UTR |
| GTCTTAACTATACAAATGAA+AGG | 0.620485 | 2_3:-24219098 | None:intergenic |
| TCTGTGTTGTGCATAAAGGA+AGG | 0.622104 | 2_3:+24217738 | None:intergenic |
| ATGTTTGGAAAGATATCACG+TGG | 0.624110 | 2_3:+24218823 | None:intergenic |
| AATCTGATTGGCTAATTGTG+TGG | 0.625812 | 2_3:+24218929 | None:intergenic |
| GAAAGGGGAGAAGGAAGGAG+AGG | 0.626442 | 2_3:+24218710 | None:intergenic |
| CGGCCGGATAACAGGGACGG+TGG | 0.630542 | 2_3:+24218739 | None:intergenic |
| GGGTTTACACTTATTAAACA+CGG | 0.633042 | 2_3:-24218495 | Msa0285060:intron |
| AGTTTCTCTTTGTCTCAGAG+AGG | 0.639980 | 2_3:-24218651 | Msa0285060:five_prime_UTR |
| TGTTTCTGCCTGCTGCGCAG+TGG | 0.642132 | 2_3:-24216403 | Msa0285060:CDS |
| GAAGCGAGCATTCAATATGG+TGG | 0.648098 | 2_3:-24217768 | Msa0285060:CDS |
| AATCGGGTGGAGTTAATGGA+GGG | 0.648223 | 2_3:-24218274 | Msa0285060:five_prime_UTR |
| TGATAGAAGGGTGTAGATGG+TGG | 0.649052 | 2_3:+24218673 | None:intergenic |
| GTCTCAGCCTCATTAACACA+TGG | 0.650642 | 2_3:-24218235 | Msa0285060:five_prime_UTR |
| GCAACAGTGAGAGGAGATTG+CGG | 0.651509 | 2_3:-24218311 | Msa0285060:five_prime_UTR |
| CTGATTGGCTAATTGTGTGG+TGG | 0.669872 | 2_3:+24218932 | None:intergenic |
| GGATGGATCGAAGACTGTAG+CGG | 0.671442 | 2_3:-24217984 | Msa0285060:five_prime_UTR |
| TGGCGGCCGGATAACAGGGA+CGG | 0.675887 | 2_3:+24218736 | None:intergenic |
| GTGGATGTTACGCCTATAGG+CGG | 0.677402 | 2_3:-24216166 | Msa0285060:three_prime_UTR |
| TGTTTGTGGACGGCTGTGGG+AGG | 0.680946 | 2_3:-24216332 | Msa0285060:CDS |
| AAGAAAACTGTCGATTCCGG+TGG | 0.685789 | 2_3:-24218602 | Msa0285060:five_prime_UTR |
| ATTAAACAGACATGACAGTG+AGG | 0.741938 | 2_3:-24218521 | Msa0285060:five_prime_UTR |
| ACAGTGAGAGGAGATTGCGG+TGG | 0.746231 | 2_3:-24218308 | Msa0285060:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATATATAAACACT+TGG | + | chr2_3:24218079-24218098 | None:intergenic | 10.0% |
| !! | TATATTACTTTAATTGTATT+TGG | - | chr2_3:24218204-24218223 | Msa0285060:intron | 10.0% |
| !! | TAAAGATCAAATAAATTATG+AGG | + | chr2_3:24217443-24217462 | None:intergenic | 15.0% |
| !! | ATACAAATTATAAACTCAAA+AGG | + | chr2_3:24217685-24217704 | None:intergenic | 15.0% |
| !!! | ATAGTTTGATAGTTTAAAAT+AGG | + | chr2_3:24217916-24217935 | None:intergenic | 15.0% |
| !! | ATATATTTATTTATTGCTAC+AGG | - | chr2_3:24218086-24218105 | Msa0285060:intron | 15.0% |
| !! | AAACAAAAAGTAAAGAAATT+TGG | - | chr2_3:24218327-24218346 | Msa0285060:five_prime_UTR | 15.0% |
| !!! | TACACTTTTTTTTTTAGAAT+CGG | + | chr2_3:24218944-24218963 | None:intergenic | 15.0% |
| !!! | GTTTTAAAAGAAAAGTTTAA+TGG | - | chr2_3:24219022-24219041 | Msa0285060:five_prime_UTR | 15.0% |
| !! | AAACATAATAAAGAAAAGTG+AGG | + | chr2_3:24218042-24218061 | None:intergenic | 20.0% |
| !! | TACTTTAATTGTATTTGGTA+TGG | - | chr2_3:24218209-24218228 | Msa0285060:intron | 20.0% |
| !! | TCAATTCTTTCTTCTTGTTT+CGG | + | chr2_3:24216461-24216480 | None:intergenic | 25.0% |
| !!! | TTCCTTCTGCTTTAATTTTT+TGG | - | chr2_3:24216828-24216847 | Msa0285060:intron | 25.0% |
| ! | AACCAAAAAATTAAAGCAGA+AGG | + | chr2_3:24216833-24216852 | None:intergenic | 25.0% |
| ! | ATCCACTGAAATAATGAAAA+GGG | + | chr2_3:24216862-24216881 | None:intergenic | 25.0% |
| ! | AATCCACTGAAATAATGAAA+AGG | + | chr2_3:24216863-24216882 | None:intergenic | 25.0% |
| !!! | TTGAGCTTTTAATTATTGAC+TGG | - | chr2_3:24217488-24217507 | Msa0285060:intron | 25.0% |
| ! | ACAGTGAGAAAACATAATTT+GGG | + | chr2_3:24217556-24217575 | None:intergenic | 25.0% |
| ! | TACAGTGAGAAAACATAATT+TGG | + | chr2_3:24217557-24217576 | None:intergenic | 25.0% |
| ! | TTATAATTAGCGAGTCAATT+GGG | + | chr2_3:24217599-24217618 | None:intergenic | 25.0% |
| ! | ATTATAATTAGCGAGTCAAT+TGG | + | chr2_3:24217600-24217619 | None:intergenic | 25.0% |
| ! | CTAATTATAATACAACCCTT+CGG | - | chr2_3:24217609-24217628 | Msa0285060:intron | 25.0% |
| ! | GATTCAAAACAGAATTATCA+AGG | - | chr2_3:24217727-24217746 | Msa0285060:CDS | 25.0% |
| ! | TCAGTTGAAAACAGAATAAT+CGG | - | chr2_3:24217792-24217811 | Msa0285060:CDS | 25.0% |
| ! | TATTTATTTATTGCTACAGG+TGG | - | chr2_3:24218089-24218108 | Msa0285060:intron | 25.0% |
| !!! | GGATCATTTGTTTTAGAATA+AGG | - | chr2_3:24218304-24218323 | Msa0285060:five_prime_UTR | 25.0% |
| !!! | TTTTTGGTTGTGGTATTTTT+AGG | - | chr2_3:24218779-24218798 | Msa0285060:five_prime_UTR | 25.0% |
| !!! | TTTTGGTTGTGGTATTTTTA+GGG | - | chr2_3:24218780-24218799 | Msa0285060:five_prime_UTR | 25.0% |
| !! | TAGAATCGGCAAATTTTATT+AGG | + | chr2_3:24218930-24218949 | None:intergenic | 25.0% |
| AAAAAACCAAGATGATCCTA+GGG | + | chr2_3:24215973-24215992 | None:intergenic | 30.0% | |
| AAAAAAACCAAGATGATCCT+AGG | + | chr2_3:24215974-24215993 | None:intergenic | 30.0% | |
| ! | AGTGTGATATCACATCATTT+TGG | + | chr2_3:24216021-24216040 | None:intergenic | 30.0% |
| TAGTTGTGTTTGTCTTGAAT+TGG | + | chr2_3:24216059-24216078 | None:intergenic | 30.0% | |
| AATTAGCCAATCAGATTTAG+AGG | - | chr2_3:24216095-24216114 | Msa0285060:intron | 30.0% | |
| ATTAGCCAATCAGATTTAGA+GGG | - | chr2_3:24216096-24216115 | Msa0285060:intron | 30.0% | |
| CAACAGCAAAATAAACCAAT+AGG | - | chr2_3:24216162-24216181 | Msa0285060:three_prime_UTR | 30.0% | |
| !!! | AGAAGTTCTGTTTTGATGTT+TGG | + | chr2_3:24216213-24216232 | None:intergenic | 30.0% |
| ACAAAGAGAAACTGATAGAA+GGG | + | chr2_3:24216360-24216379 | None:intergenic | 30.0% | |
| GGGTTTACACTTATTAAACA+CGG | - | chr2_3:24216523-24216542 | Msa0285060:intron | 30.0% | |
| ATCATAACTCAGGAAAGAAA+AGG | + | chr2_3:24216633-24216652 | None:intergenic | 30.0% | |
| CTCAAAAATCATCATAACTC+AGG | + | chr2_3:24216643-24216662 | None:intergenic | 30.0% | |
| TTGATTACCATGTGTTAATG+AGG | + | chr2_3:24216793-24216812 | None:intergenic | 30.0% | |
| ACATGGTAATCAATCTTTAC+AGG | - | chr2_3:24216800-24216819 | Msa0285060:intron | 30.0% | |
| ! | TTCCCTTTTCATTATTTCAG+TGG | - | chr2_3:24216857-24216876 | Msa0285060:intron | 30.0% |
| ACAGTTAGCTACAAATGTTT+CGG | - | chr2_3:24216941-24216960 | Msa0285060:intron | 30.0% | |
| GAATTTATTGAACCACGAAT+TGG | - | chr2_3:24217013-24217032 | Msa0285060:intron | 30.0% | |
| TGTAGGGTTTATTGTAAACA+AGG | - | chr2_3:24217080-24217099 | Msa0285060:intron | 30.0% | |
| TTGTTCCCAAACTGAAATAA+TGG | - | chr2_3:24217140-24217159 | Msa0285060:intron | 30.0% | |
| TCAAATAAATTATGAGGCAG+AGG | + | chr2_3:24217437-24217456 | None:intergenic | 30.0% | |
| !! | GCTTTTAATTATTGACTGGT+TGG | - | chr2_3:24217492-24217511 | Msa0285060:intron | 30.0% |
| AGTGAGAAAACATAATTTGG+GGG | + | chr2_3:24217554-24217573 | None:intergenic | 30.0% | |
| CAGTGAGAAAACATAATTTG+GGG | + | chr2_3:24217555-24217574 | None:intergenic | 30.0% | |
| !! | TTCTGTTTTGAATCAATCTG+AGG | + | chr2_3:24217721-24217740 | None:intergenic | 30.0% |
| AAAACAGAATTATCAAGGCA+TGG | - | chr2_3:24217732-24217751 | Msa0285060:CDS | 30.0% | |
| AACTGACATTATTCCACAAA+AGG | + | chr2_3:24217778-24217797 | None:intergenic | 30.0% | |
| !! | CTGTTTGGTGTTTAATACAT+TGG | + | chr2_3:24217970-24217989 | None:intergenic | 30.0% |
| ACTACACACTTACATTTACT+TGG | + | chr2_3:24218154-24218173 | None:intergenic | 30.0% | |
| TAAATCCTGATCATCTTGTA+TGG | + | chr2_3:24218468-24218487 | None:intergenic | 30.0% | |
| TCTCAATCTTCTAACAATCA+TGG | - | chr2_3:24218491-24218510 | Msa0285060:intron | 30.0% | |
| ATTTCAGTGTCTATTGTTTC+AGG | - | chr2_3:24218540-24218559 | Msa0285060:five_prime_UTR | 30.0% | |
| AGATTTCAAAGTCATAGCTT+TGG | - | chr2_3:24218749-24218768 | Msa0285060:five_prime_UTR | 30.0% | |
| !!! | TTTGGTTGTGGTATTTTTAG+GGG | - | chr2_3:24218781-24218800 | Msa0285060:five_prime_UTR | 30.0% |
| TATTGAGATGAGATGTTTCA+AGG | - | chr2_3:24219053-24219072 | Msa0285060:five_prime_UTR | 30.0% | |
| !!! | ATCATTTTGGCTCCAAAGAA+GGG | + | chr2_3:24216008-24216027 | None:intergenic | 35.0% |
| ! | AATCTGATTGGCTAATTGTG+TGG | + | chr2_3:24216092-24216111 | None:intergenic | 35.0% |
| TTTGCAAGTAACAACCAATC+AGG | - | chr2_3:24216119-24216138 | Msa0285060:intron | 35.0% | |
| TAACAACCAATCAGGTTTAG+AGG | - | chr2_3:24216127-24216146 | Msa0285060:intron | 35.0% | |
| AACAACCAATCAGGTTTAGA+GGG | - | chr2_3:24216128-24216147 | Msa0285060:intron | 35.0% | |
| ATGTTTGGAAAGATATCACG+TGG | + | chr2_3:24216198-24216217 | None:intergenic | 35.0% | |
| GACAAAGAGAAACTGATAGA+AGG | + | chr2_3:24216361-24216380 | None:intergenic | 35.0% | |
| !! | TGAAAGAAAACTGTCGATTC+CGG | - | chr2_3:24216413-24216432 | Msa0285060:CDS | 35.0% |
| ATTAAACAGACATGACAGTG+AGG | - | chr2_3:24216497-24216516 | Msa0285060:intron | 35.0% | |
| ! | TCAATTTAGTTTCAACGCAG+TGG | - | chr2_3:24216680-24216699 | Msa0285060:CDS | 35.0% |
| !! | TTCAGTGGATTGATTCATTC+TGG | - | chr2_3:24216872-24216891 | Msa0285060:intron | 35.0% |
| TTATTGAACCACGAATTGGA+TGG | - | chr2_3:24217017-24217036 | Msa0285060:intron | 35.0% | |
| CATCGCCATTATTTCAGTTT+GGG | + | chr2_3:24217148-24217167 | None:intergenic | 35.0% | |
| TCTATCTGTGTTGTGCATAA+AGG | + | chr2_3:24217287-24217306 | None:intergenic | 35.0% | |
| CCAGTTGTATTGTCATGTAA+TGG | + | chr2_3:24217313-24217332 | None:intergenic | 35.0% | |
| CCATTACATGACAATACAAC+TGG | - | chr2_3:24217310-24217329 | Msa0285060:intron | 35.0% | |
| CTTCTGTCTTTGCATTCAAA+CGG | - | chr2_3:24217341-24217360 | Msa0285060:intron | 35.0% | |
| GTGAGAAAACATAATTTGGG+GGG | + | chr2_3:24217553-24217572 | None:intergenic | 35.0% | |
| ! | TGGGAAGTACAACAAATAGA+TGG | + | chr2_3:24217580-24217599 | None:intergenic | 35.0% |
| TCTAATGACTTCTTGCAAAG+AGG | + | chr2_3:24217659-24217678 | None:intergenic | 35.0% | |
| ! | TCATGTAACTTTGCCTTTTG+TGG | - | chr2_3:24217762-24217781 | Msa0285060:CDS | 35.0% |
| CATTTGCTTGTGTAAAACTG+TGG | - | chr2_3:24218014-24218033 | Msa0285060:five_prime_UTR | 35.0% | |
| GGTAGAATAAGATTGTACAG+TGG | - | chr2_3:24218230-24218249 | Msa0285060:five_prime_UTR | 35.0% | |
| ATTGTACAGTGGCAGTTATA+AGG | - | chr2_3:24218241-24218260 | Msa0285060:five_prime_UTR | 35.0% | |
| TTGTACAGTGGCAGTTATAA+GGG | - | chr2_3:24218242-24218261 | Msa0285060:five_prime_UTR | 35.0% | |
| GATTAACTGAACACAATACG+TGG | - | chr2_3:24218266-24218285 | Msa0285060:five_prime_UTR | 35.0% | |
| ACGTGGATTCTTTCTAACTT+TGG | - | chr2_3:24218283-24218302 | Msa0285060:five_prime_UTR | 35.0% | |
| CCAAGGGATGAAAATTGAAT+CGG | + | chr2_3:24218380-24218399 | None:intergenic | 35.0% | |
| ATACCACAACCAAAAAAGCA+TGG | + | chr2_3:24218775-24218794 | None:intergenic | 35.0% | |
| TTACAGAAATGCCCCTTCTT+TGG | - | chr2_3:24215993-24216012 | Msa0285060:three_prime_UTR | 40.0% | |
| !!! | TCATTTTGGCTCCAAAGAAG+GGG | + | chr2_3:24216007-24216026 | None:intergenic | 40.0% |
| !!! | CATCATTTTGGCTCCAAAGA+AGG | + | chr2_3:24216009-24216028 | None:intergenic | 40.0% |
| GCAAACCCTCTAAATCTGAT+TGG | + | chr2_3:24216104-24216123 | None:intergenic | 40.0% | |
| ! | AACTGATAGAAGGGTGTAGA+TGG | + | chr2_3:24216351-24216370 | None:intergenic | 40.0% |
| AGTTTCTCTTTGTCTCAGAG+AGG | - | chr2_3:24216367-24216386 | Msa0285060:CDS | 40.0% | |
| AGGTGAAGATAGACTTCGAT+CGG | - | chr2_3:24216387-24216406 | Msa0285060:CDS | 40.0% | |
| AGCGAAGATGAAGATGAAGA+AGG | - | chr2_3:24216973-24216992 | Msa0285060:intron | 40.0% | |
| ACTAAAAGGATGACAGGTGT+AGG | - | chr2_3:24217063-24217082 | Msa0285060:intron | 40.0% | |
| CTAAAAGGATGACAGGTGTA+GGG | - | chr2_3:24217064-24217083 | Msa0285060:intron | 40.0% | |
| CCATCGCCATTATTTCAGTT+TGG | + | chr2_3:24217149-24217168 | None:intergenic | 40.0% | |
| CCAAACTGAAATAATGGCGA+TGG | - | chr2_3:24217146-24217165 | Msa0285060:intron | 40.0% | |
| CGAATGCTTGTTCTCTTCAA+CGG | + | chr2_3:24217223-24217242 | None:intergenic | 40.0% | |
| GAAGAGAACAAGCATTCGAA+TGG | - | chr2_3:24217225-24217244 | Msa0285060:intron | 40.0% | |
| GATGAAGCGAGCATTCAATA+TGG | - | chr2_3:24217247-24217266 | Msa0285060:intron | 40.0% | |
| TCTGTGTTGTGCATAAAGGA+AGG | + | chr2_3:24217283-24217302 | None:intergenic | 40.0% | |
| CGTTTGAATGCAAAGACAGA+AGG | + | chr2_3:24217343-24217362 | None:intergenic | 40.0% | |
| ACTGCATCATCATATGTGTG+TGG | + | chr2_3:24217402-24217421 | None:intergenic | 40.0% | |
| GAAAACATAATTTGGGGGGT+GGG | + | chr2_3:24217549-24217568 | None:intergenic | 40.0% | |
| AGAAAACATAATTTGGGGGG+TGG | + | chr2_3:24217550-24217569 | None:intergenic | 40.0% | |
| ! | CAATCTGAGGCACAAAAGAA+AGG | + | chr2_3:24217708-24217727 | None:intergenic | 40.0% |
| ! | CTGACATTGAATCTAGCTTG+AGG | + | chr2_3:24217819-24217838 | None:intergenic | 40.0% |
| CTCAAGCTAGATTCAATGTC+AGG | - | chr2_3:24217817-24217836 | Msa0285060:intron | 40.0% | |
| AATGTCAGGTAGATTTCACG+AGG | - | chr2_3:24217831-24217850 | Msa0285060:intron | 40.0% | |
| CAAGATGACACAATTGGTAG+TGG | + | chr2_3:24217942-24217961 | None:intergenic | 40.0% | |
| CACTACCAATTGTGTCATCT+TGG | - | chr2_3:24217940-24217959 | Msa0285060:intron | 40.0% | |
| ! | GCTTAAAGTCATGTGCTGTT+TGG | + | chr2_3:24217985-24218004 | None:intergenic | 40.0% |
| ! | CCGATTCAATTTTCATCCCT+TGG | - | chr2_3:24218377-24218396 | Msa0285060:intron | 40.0% |
| !! | TCCGGTTTTGTCTTTTCTTG+AGG | - | chr2_3:24218409-24218428 | Msa0285060:intron | 40.0% |
| GCCTCAAGAAAAGACAAAAC+CGG | + | chr2_3:24218413-24218432 | None:intergenic | 40.0% | |
| ! | TCTTTTCTTGAGGCTCTTGA+GGG | - | chr2_3:24218419-24218438 | Msa0285060:intron | 40.0% |
| TGTCTATTGTTTCAGGCTGT+TGG | - | chr2_3:24218547-24218566 | Msa0285060:five_prime_UTR | 40.0% | |
| TTGCTTGGAGTCATTGTTTG+TGG | - | chr2_3:24218672-24218691 | Msa0285060:five_prime_UTR | 40.0% | |
| TTGGAGTCATTGTTTGTGGA+CGG | - | chr2_3:24218676-24218695 | Msa0285060:five_prime_UTR | 40.0% | |
| ! | TCAGCTATGGACTTGGATTT+TGG | - | chr2_3:24218716-24218735 | Msa0285060:five_prime_UTR | 40.0% |
| !!! | TAGCTTTGGCCATGCTTTTT+TGG | - | chr2_3:24218763-24218782 | Msa0285060:five_prime_UTR | 40.0% |
| CACCTTATCCAACACGAATA+CGG | + | chr2_3:24218815-24218834 | None:intergenic | 40.0% | |
| ! | AAGGTGACGTAGTTGTGTTT+TGG | - | chr2_3:24218829-24218848 | Msa0285060:five_prime_UTR | 40.0% |
| ! | AGGTGACGTAGTTGTGTTTT+GGG | - | chr2_3:24218830-24218849 | Msa0285060:five_prime_UTR | 40.0% |
| CAATACAAAATGCCGCCTAT+AGG | + | chr2_3:24218867-24218886 | None:intergenic | 40.0% | |
| TTTGCACCTTGCAAGAGTTT+CGG | - | chr2_3:24218904-24218923 | Msa0285060:five_prime_UTR | 40.0% | |
| ATGATCCTAGGGTTTGGCTA+GGG | + | chr2_3:24215962-24215981 | None:intergenic | 45.0% | |
| ACCAAGATGATCCTAGGGTT+TGG | + | chr2_3:24215968-24215987 | None:intergenic | 45.0% | |
| ATCACACTACTGAAAGCAGC+TGG | - | chr2_3:24216033-24216052 | Msa0285060:three_prime_UTR | 45.0% | |
| ! | CTGATTGGCTAATTGTGTGG+TGG | + | chr2_3:24216089-24216108 | None:intergenic | 45.0% |
| GCAAACCCTCTAAACCTGAT+TGG | + | chr2_3:24216136-24216155 | None:intergenic | 45.0% | |
| CGTGGAGCAAGATATCCTAT+TGG | + | chr2_3:24216180-24216199 | None:intergenic | 45.0% | |
| ! | TGATAGAAGGGTGTAGATGG+TGG | + | chr2_3:24216348-24216367 | None:intergenic | 45.0% |
| !! | AAGAAAACTGTCGATTCCGG+TGG | - | chr2_3:24216416-24216435 | Msa0285060:CDS | 45.0% |
| ACAGACATGACAGTGAGGTT+AGG | - | chr2_3:24216502-24216521 | Msa0285060:intron | 45.0% | |
| CAGACATGACAGTGAGGTTA+GGG | - | chr2_3:24216503-24216522 | Msa0285060:intron | 45.0% | |
| AAACACGGTGAGTCTAGACA+CGG | - | chr2_3:24216538-24216557 | Msa0285060:CDS | 45.0% | |
| GATCGCAGTTCTGCTAAAAG+CGG | - | chr2_3:24216576-24216595 | Msa0285060:CDS | 45.0% | |
| !! | AAAGCGGCAGCAATTTGCTA+AGG | - | chr2_3:24216592-24216611 | Msa0285060:CDS | 45.0% |
| AATCGGGTGGAGTTAATGGA+GGG | - | chr2_3:24216744-24216763 | Msa0285060:intron | 45.0% | |
| TGGAGTTAATGGAGGGAGAT+AGG | - | chr2_3:24216751-24216770 | Msa0285060:intron | 45.0% | |
| GGAGTTAATGGAGGGAGATA+GGG | - | chr2_3:24216752-24216771 | Msa0285060:intron | 45.0% | |
| GTCTCAGCCTCATTAACACA+TGG | - | chr2_3:24216783-24216802 | Msa0285060:intron | 45.0% | |
| TCTTCGATCCATCCAATTCG+TGG | + | chr2_3:24217028-24217047 | None:intergenic | 45.0% | |
| CAGGTGACTAAAAGGATGAC+AGG | - | chr2_3:24217057-24217076 | Msa0285060:intron | 45.0% | |
| GAAGCGAGCATTCAATATGG+TGG | - | chr2_3:24217250-24217269 | Msa0285060:intron | 45.0% | |
| ! | TACAACCCTTCGGTTTGAGA+TGG | - | chr2_3:24217619-24217638 | Msa0285060:intron | 45.0% |
| ! | GTTTGAGATGGTGCACTAGA+CGG | - | chr2_3:24217631-24217650 | Msa0285060:intron | 45.0% |
| GCTGACCAAGATGACACAAT+TGG | + | chr2_3:24217948-24217967 | None:intergenic | 45.0% | |
| ATCCCTTGGCAAACAAGTTC+CGG | - | chr2_3:24218391-24218410 | Msa0285060:intron | 45.0% | |
| ! | AACCGGAACTTGTTTGCCAA+GGG | + | chr2_3:24218396-24218415 | None:intergenic | 45.0% |
| ! | AAACCGGAACTTGTTTGCCA+AGG | + | chr2_3:24218397-24218416 | None:intergenic | 45.0% |
| ! | GTCTTTTCTTGAGGCTCTTG+AGG | - | chr2_3:24218418-24218437 | Msa0285060:intron | 45.0% |
| TTGTATGGACTCCTCAGACT+TGG | + | chr2_3:24218453-24218472 | None:intergenic | 45.0% | |
| GGAGTCCATACAAGATGATC+AGG | - | chr2_3:24218460-24218479 | Msa0285060:intron | 45.0% | |
| ! | ATTGTTTCAGGCTGTTGGCT+CGG | - | chr2_3:24218552-24218571 | Msa0285060:five_prime_UTR | 45.0% |
| !!! | TGGCCATGCTTTTTTGGTTG+TGG | - | chr2_3:24218769-24218788 | Msa0285060:five_prime_UTR | 45.0% |
| !! | TGACGTAGTTGTGTTTTGGG+TGG | - | chr2_3:24218833-24218852 | Msa0285060:five_prime_UTR | 45.0% |
| AACTCTTGCAAGGTGCAAAG+AGG | + | chr2_3:24218903-24218922 | None:intergenic | 45.0% | |
| ATTAGGCCGAAACTCTTGCA+AGG | + | chr2_3:24218913-24218932 | None:intergenic | 45.0% | |
| GATGATCCTAGGGTTTGGCT+AGG | + | chr2_3:24215963-24215982 | None:intergenic | 50.0% | |
| GCCAAACCCTAGGATCATCT+TGG | - | chr2_3:24215964-24215983 | Msa0285060:three_prime_UTR | 50.0% | |
| ! | AGAAGGGTGTAGATGGTGGT+GGG | + | chr2_3:24216344-24216363 | None:intergenic | 50.0% |
| ! | TAGAAGGGTGTAGATGGTGG+TGG | + | chr2_3:24216345-24216364 | None:intergenic | 50.0% |
| !! | AAAACTGTCGATTCCGGTGG+TGG | - | chr2_3:24216419-24216438 | Msa0285060:CDS | 50.0% |
| CAGAACTGCGATCAGAGCAA+CGG | + | chr2_3:24216569-24216588 | None:intergenic | 50.0% | |
| GCAACAGTGAGAGGAGATTG+CGG | - | chr2_3:24216707-24216726 | Msa0285060:intron | 50.0% | |
| AGGGAATCGGGTGGAGTTAA+TGG | - | chr2_3:24216740-24216759 | Msa0285060:intron | 50.0% | |
| GAATCGGGTGGAGTTAATGG+AGG | - | chr2_3:24216743-24216762 | Msa0285060:intron | 50.0% | |
| GGATGGATCGAAGACTGTAG+CGG | - | chr2_3:24217034-24217053 | Msa0285060:intron | 50.0% | |
| TGTAGCGGCAGGTGACTAAA+AGG | - | chr2_3:24217049-24217068 | Msa0285060:intron | 50.0% | |
| GCGAGCATTCAATATGGTGG+AGG | - | chr2_3:24217253-24217272 | Msa0285060:intron | 50.0% | |
| GTGCACCATCTCAAACCGAA+GGG | + | chr2_3:24217627-24217646 | None:intergenic | 50.0% | |
| AGTGCACCATCTCAAACCGA+AGG | + | chr2_3:24217628-24217647 | None:intergenic | 50.0% | |
| GGGTTCTGTTTCCAAGTCTG+AGG | - | chr2_3:24218439-24218458 | Msa0285060:intron | 50.0% | |
| !!! | TTTTGGGCCTGTTTTAGCCG+TGG | - | chr2_3:24218639-24218658 | Msa0285060:five_prime_UTR | 50.0% |
| TCATTGTTTGTGGACGGCTG+TGG | - | chr2_3:24218682-24218701 | Msa0285060:five_prime_UTR | 50.0% | |
| CATTGTTTGTGGACGGCTGT+GGG | - | chr2_3:24218683-24218702 | Msa0285060:five_prime_UTR | 50.0% | |
| TAGTGGCTCAGCTATGGACT+TGG | - | chr2_3:24218709-24218728 | Msa0285060:five_prime_UTR | 50.0% | |
| CTACTTCGCCGTATTCGTGT+TGG | - | chr2_3:24218804-24218823 | Msa0285060:five_prime_UTR | 50.0% | |
| CGCCGTATTCGTGTTGGATA+AGG | - | chr2_3:24218810-24218829 | Msa0285060:five_prime_UTR | 50.0% | |
| TGGGTGGATGTTACGCCTAT+AGG | - | chr2_3:24218849-24218868 | Msa0285060:five_prime_UTR | 50.0% | |
| GTGGATGTTACGCCTATAGG+CGG | - | chr2_3:24218852-24218871 | Msa0285060:five_prime_UTR | 50.0% | |
| TCTTGCAAGGTGCAAAGAGG+CGG | + | chr2_3:24218900-24218919 | None:intergenic | 50.0% | |
| CCTAGGGTTTGGCTAGGGTT+TGG | + | chr2_3:24215957-24215976 | None:intergenic | 55.0% | |
| CCAAACCCTAGCCAAACCCT+AGG | - | chr2_3:24215954-24215973 | Msa0285060:three_prime_UTR | 55.0% | |
| ! | TAACAGGGACGGTGGTGGTA+GGG | + | chr2_3:24216274-24216293 | None:intergenic | 55.0% |
| ! | ATAACAGGGACGGTGGTGGT+AGG | + | chr2_3:24216275-24216294 | None:intergenic | 55.0% |
| GAAAGGGGAGAAGGAAGGAG+AGG | + | chr2_3:24216311-24216330 | None:intergenic | 55.0% | |
| CTCACGAAAGGGGAGAAGGA+AGG | + | chr2_3:24216316-24216335 | None:intergenic | 55.0% | |
| CTTCCTTCTCCCCTTTCGTG+AGG | - | chr2_3:24216314-24216333 | Msa0285060:exon | 55.0% | |
| ! | GAAGGGTGTAGATGGTGGTG+GGG | + | chr2_3:24216343-24216362 | None:intergenic | 55.0% |
| AGTGGCAACGCAACAGTGAG+AGG | - | chr2_3:24216698-24216717 | Msa0285060:CDS | 55.0% | |
| ACAGTGAGAGGAGATTGCGG+TGG | - | chr2_3:24216710-24216729 | Msa0285060:intron | 55.0% | |
| ! | AGATTGCGGTGGTGGTGAGA+GGG | - | chr2_3:24216721-24216740 | Msa0285060:intron | 55.0% |
| !!! | CAGGCTGTTGGCTCGGTTTT+AGG | - | chr2_3:24218559-24218578 | Msa0285060:five_prime_UTR | 55.0% |
| !!! | CTCGGTTTTAGGCTGCTGTC+AGG | - | chr2_3:24218570-24218589 | Msa0285060:five_prime_UTR | 55.0% |
| ! | CCTGCTGCGCAGTGGTTTTT+GGG | - | chr2_3:24218623-24218642 | Msa0285060:five_prime_UTR | 55.0% |
| CAAGCAAACAGCAGCTGCCA+CGG | + | chr2_3:24218659-24218678 | None:intergenic | 55.0% | |
| GGTGCAAAGAGGCGGCAAAA+CGG | + | chr2_3:24218892-24218911 | None:intergenic | 55.0% | |
| TGGTGGTAGGGGGAGAACAG+GGG | + | chr2_3:24216262-24216281 | None:intergenic | 60.0% | |
| GTGGTGGTAGGGGGAGAACA+GGG | + | chr2_3:24216263-24216282 | None:intergenic | 60.0% | |
| ! | AACAGGGACGGTGGTGGTAG+GGG | + | chr2_3:24216273-24216292 | None:intergenic | 60.0% |
| CCACCACCGTCCCTGTTATC+CGG | - | chr2_3:24216276-24216295 | Msa0285060:three_prime_UTR | 60.0% | |
| ! | GAAGGAAGGAGAGGTGGTGG+CGG | + | chr2_3:24216302-24216321 | None:intergenic | 60.0% |
| GGAGAAGGAAGGAGAGGTGG+TGG | + | chr2_3:24216305-24216324 | None:intergenic | 60.0% | |
| AGGGGAGAAGGAAGGAGAGG+TGG | + | chr2_3:24216308-24216327 | None:intergenic | 60.0% | |
| TGGCCTCACGAAAGGGGAGA+AGG | + | chr2_3:24216320-24216339 | None:intergenic | 60.0% | |
| CACGGTGAGTCTAGACACGG+CGG | - | chr2_3:24216541-24216560 | Msa0285060:CDS | 60.0% | |
| GTGAGAGGAGATTGCGGTGG+TGG | - | chr2_3:24216713-24216732 | Msa0285060:intron | 60.0% | |
| ! | GAGATTGCGGTGGTGGTGAG+AGG | - | chr2_3:24216720-24216739 | Msa0285060:intron | 60.0% |
| ! | CGGTGGTGGTGAGAGGGAAT+CGG | - | chr2_3:24216727-24216746 | Msa0285060:intron | 60.0% |
| ! | GGTGGTGGTGAGAGGGAATC+GGG | - | chr2_3:24216728-24216747 | Msa0285060:intron | 60.0% |
| GGATCGAAGACTGTAGCGGC+AGG | - | chr2_3:24217038-24217057 | Msa0285060:intron | 60.0% | |
| CGGTCGCTTGCACGATGCTA+TGG | + | chr2_3:24217203-24217222 | None:intergenic | 60.0% | |
| ! | TGTTTCTGCCTGCTGCGCAG+TGG | - | chr2_3:24218615-24218634 | Msa0285060:five_prime_UTR | 60.0% |
| ! | GCCTGCTGCGCAGTGGTTTT+TGG | - | chr2_3:24218622-24218641 | Msa0285060:five_prime_UTR | 60.0% |
| CCCAAAAACCACTGCGCAGC+AGG | + | chr2_3:24218626-24218645 | None:intergenic | 60.0% | |
| GCAGCTGCCACGGCTAAAAC+AGG | + | chr2_3:24218649-24218668 | None:intergenic | 60.0% | |
| ! | CGTGGCAGCTGCTGTTTGCT+TGG | - | chr2_3:24218657-24218676 | Msa0285060:five_prime_UTR | 60.0% |
| TGTTTGTGGACGGCTGTGGG+AGG | - | chr2_3:24218686-24218705 | Msa0285060:five_prime_UTR | 60.0% | |
| ! | GGGAGGTAGTGGCTCAGCTA+TGG | - | chr2_3:24218703-24218722 | Msa0285060:five_prime_UTR | 60.0% |
| ! | GGTGGTGGTAGGGGGAGAAC+AGG | + | chr2_3:24216264-24216283 | None:intergenic | 65.0% |
| ! | ACAGGGACGGTGGTGGTAGG+GGG | + | chr2_3:24216272-24216291 | None:intergenic | 65.0% |
| CCGGATAACAGGGACGGTGG+TGG | + | chr2_3:24216279-24216298 | None:intergenic | 65.0% | |
| TGGCGGCCGGATAACAGGGA+CGG | + | chr2_3:24216285-24216304 | None:intergenic | 65.0% | |
| !! | GTGGTGGCGGCCGGATAACA+GGG | + | chr2_3:24216289-24216308 | None:intergenic | 65.0% |
| GTGGGGTGGCCTCACGAAAG+GGG | + | chr2_3:24216326-24216345 | None:intergenic | 65.0% | |
| GGTGGGGTGGCCTCACGAAA+GGG | + | chr2_3:24216327-24216346 | None:intergenic | 65.0% | |
| TGGTGGGGTGGCCTCACGAA+AGG | + | chr2_3:24216328-24216347 | None:intergenic | 65.0% | |
| !! | GGGTGTAGATGGTGGTGGGG+TGG | + | chr2_3:24216340-24216359 | None:intergenic | 65.0% |
| ! | GTCGATTCCGGTGGTGGCAG+CGG | - | chr2_3:24216425-24216444 | Msa0285060:CDS | 65.0% |
| GGTGGTGAGAGGGAATCGGG+TGG | - | chr2_3:24216731-24216750 | Msa0285060:intron | 65.0% | |
| TGGACGGCTGTGGGAGGTAG+TGG | - | chr2_3:24218692-24218711 | Msa0285060:five_prime_UTR | 65.0% | |
| CGGCCGGATAACAGGGACGG+TGG | + | chr2_3:24216282-24216301 | None:intergenic | 70.0% | |
| !! | GGTGGTGGCGGCCGGATAAC+AGG | + | chr2_3:24216290-24216309 | None:intergenic | 70.0% |
| !! | GAAGGAGAGGTGGTGGCGGC+CGG | + | chr2_3:24216298-24216317 | None:intergenic | 70.0% |
| TCCTCGTCCGCTGCCACCAC+CGG | + | chr2_3:24216435-24216454 | None:intergenic | 70.0% | |
| ! | TCCGGTGGTGGCAGCGGACG+AGG | - | chr2_3:24216431-24216450 | Msa0285060:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 24215925 | 24219115 | 24215925 | ID=Msa0285060;Name=Msa0285060 |
| chr2_3 | mRNA | 24215925 | 24219115 | 24215925 | ID=Msa0285060-mRNA-1;Parent=Msa0285060;Name=Msa0285060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=880|0.75|0.77|1|0.25|0.22|9|322|179 |
| chr2_3 | exon | 24215925 | 24216071 | 24215925 | ID=Msa0285060-mRNA-1:exon:9179;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24216154 | 24216478 | 24216154 | ID=Msa0285060-mRNA-1:exon:9178;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24216486 | 24216493 | 24216486 | ID=Msa0285060-mRNA-1:exon:9177;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24216525 | 24216720 | 24216525 | ID=Msa0285060-mRNA-1:exon:9176;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24216880 | 24216932 | 24216880 | ID=Msa0285060-mRNA-1:exon:9175;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24217709 | 24217834 | 24217709 | ID=Msa0285060-mRNA-1:exon:9174;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24217962 | 24218095 | 24217962 | ID=Msa0285060-mRNA-1:exon:9173;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24218219 | 24218351 | 24218219 | ID=Msa0285060-mRNA-1:exon:9172;Parent=Msa0285060-mRNA-1 |
| chr2_3 | exon | 24218496 | 24219115 | 24218496 | ID=Msa0285060-mRNA-1:exon:9171;Parent=Msa0285060-mRNA-1 |
| chr2_3 | five_prime_UTR | 24218496 | 24219115 | 24218496 | ID=Msa0285060-mRNA-1:five_prime_utr;Parent=Msa0285060-mRNA-1 |
| chr2_3 | five_prime_UTR | 24218219 | 24218351 | 24218219 | ID=Msa0285060-mRNA-1:five_prime_utr;Parent=Msa0285060-mRNA-1 |
| chr2_3 | five_prime_UTR | 24217969 | 24218095 | 24217969 | ID=Msa0285060-mRNA-1:five_prime_utr;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24217962 | 24217968 | 24217962 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24217709 | 24217834 | 24217709 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24216880 | 24216932 | 24216880 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24216525 | 24216720 | 24216525 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24216486 | 24216493 | 24216486 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | CDS | 24216329 | 24216478 | 24216329 | ID=Msa0285060-mRNA-1:cds;Parent=Msa0285060-mRNA-1 |
| chr2_3 | three_prime_UTR | 24216154 | 24216328 | 24216154 | ID=Msa0285060-mRNA-1:three_prime_utr;Parent=Msa0285060-mRNA-1 |
| chr2_3 | three_prime_UTR | 24215925 | 24216071 | 24215925 | ID=Msa0285060-mRNA-1:three_prime_utr;Parent=Msa0285060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
