Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729840 | XP_003614538.1 | 93.586 | 686 | 42 | 2 | 1 | 685 | 1 | 685 | 0.0 | 1298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729840 | G7JZF1 | 93.586 | 686 | 42 | 2 | 1 | 685 | 1 | 685 | 0.0 | 1298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015050 | Msa0729840 | 0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa0622790 | Msa0729840 | 0.809719 | 1.646867e-50 | -8.615850e-47 |
| Msa0693520 | Msa0729840 | 0.801502 | 8.737559e-49 | -8.615850e-47 |
| Msa0729840 | Msa1315750 | 0.807763 | 4.312506e-50 | -8.615850e-47 |
| Msa0729840 | Msa1316360 | 0.802913 | 4.477546e-49 | -8.615850e-47 |
| Msa0729840 | Msa1401990 | 0.808633 | 2.813882e-50 | -8.615850e-47 |
| Msa0729840 | Msa1407760 | 0.812116 | 4.983188e-51 | -8.615850e-47 |
| Msa0729840 | Msa1437730 | 0.805521 | 1.282329e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729840 | MtrunA17_Chr5g0423001 | 87.241 | 580 | 35 | 2 | 107 | 685 | 1 | 542 | 0.0 | 1007 |
| Msa0729840 | MtrunA17_Chr3g0101951 | 33.511 | 564 | 313 | 12 | 24 | 550 | 17 | 555 | 5.17e-94 | 305 |
| Msa0729840 | MtrunA17_Chr2g0290351 | 33.743 | 569 | 322 | 14 | 16 | 549 | 2 | 550 | 5.09e-92 | 300 |
| Msa0729840 | MtrunA17_Chr5g0423021 | 91.837 | 98 | 7 | 1 | 1 | 98 | 1 | 97 | 5.43e-54 | 180 |
| Msa0729840 | MtrunA17_Chr1g0192961 | 28.834 | 163 | 98 | 3 | 380 | 541 | 8 | 153 | 3.89e-15 | 78.2 |
| Msa0729840 | MtrunA17_Chr1g0192961 | 27.586 | 174 | 102 | 4 | 392 | 564 | 181 | 331 | 4.92e-12 | 68.6 |
| Msa0729840 | MtrunA17_Chr1g0192931 | 30.872 | 149 | 82 | 4 | 388 | 534 | 55 | 184 | 1.39e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729840 | AT1G68580.2 | 43.153 | 628 | 313 | 14 | 7 | 618 | 1 | 600 | 7.29e-152 | 455 |
| Msa0729840 | AT1G68580.4 | 44.505 | 546 | 266 | 10 | 7 | 542 | 1 | 519 | 6.09e-143 | 427 |
| Msa0729840 | AT1G68580.5 | 44.677 | 526 | 260 | 11 | 105 | 618 | 48 | 554 | 1.13e-134 | 409 |
| Msa0729840 | AT1G68580.3 | 46.278 | 497 | 236 | 11 | 134 | 618 | 27 | 504 | 2.12e-134 | 407 |
| Msa0729840 | AT1G68580.1 | 48.675 | 415 | 189 | 7 | 134 | 542 | 27 | 423 | 3.01e-125 | 379 |
| Msa0729840 | AT5G55600.2 | 32.285 | 604 | 337 | 16 | 19 | 579 | 3 | 577 | 1.28e-85 | 283 |
| Msa0729840 | AT5G55600.1 | 32.285 | 604 | 337 | 16 | 19 | 579 | 3 | 577 | 1.28e-85 | 283 |
| Msa0729840 | AT5G55600.3 | 32.285 | 604 | 337 | 16 | 19 | 579 | 3 | 577 | 1.28e-85 | 283 |
| Msa0729840 | AT4G17330.2 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1564 | 1725 | 1.79e-15 | 81.3 |
| Msa0729840 | AT4G17330.1 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1564 | 1725 | 1.79e-15 | 81.3 |
| Msa0729840 | AT4G17330.3 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1529 | 1690 | 1.91e-15 | 81.3 |
| Msa0729840 | AT1G26540.1 | 31.973 | 147 | 77 | 5 | 395 | 535 | 14 | 143 | 1.77e-11 | 67.8 |
| Msa0729840 | AT1G11420.1 | 34.416 | 154 | 71 | 7 | 395 | 541 | 13 | 143 | 1.99e-11 | 67.8 |
| Msa0729840 | AT1G09320.1 | 33.136 | 169 | 84 | 6 | 376 | 533 | 26 | 176 | 2.25e-11 | 67.4 |
| Msa0729840 | AT1G09320.1 | 30.464 | 151 | 84 | 4 | 385 | 533 | 217 | 348 | 6.08e-11 | 65.9 |
Find 217 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCAATTATCGTTATTA+TGG | 0.211605 | 5_1:-37814385 | Msa0729840:exon |
| CAAATCAACTGTAGCATCTA+TGG | 0.214796 | 5_1:-37811183 | Msa0729840:CDS |
| CCAACATTGGCTTTGACTTT+AGG | 0.230371 | 5_1:-37810504 | Msa0729840:three_prime_UTR |
| TGCCACTTCGATTCCTCTTC+CGG | 0.234442 | 5_1:+37811030 | None:intergenic |
| AGAGAGGGAGGGGTTTGAAT+TGG | 0.247560 | 5_1:+37814414 | None:intergenic |
| CGCGTACACAAGTTGTTAAT+TGG | 0.250039 | 5_1:-37814113 | Msa0729840:CDS |
| TTCTTCCAGGGATGCGAATA+TGG | 0.258934 | 5_1:-37813343 | Msa0729840:CDS |
| GTATACCGTTGCTTCTTCTT+TGG | 0.259938 | 5_1:+37812103 | None:intergenic |
| TAACTCAAATGGAGGGTTAT+TGG | 0.262495 | 5_1:-37812246 | Msa0729840:CDS |
| ACCTTCAATGTTCCAATATC+AGG | 0.270568 | 5_1:+37813297 | None:intergenic |
| TTTGTTACTGCTACTGGTTT+TGG | 0.270922 | 5_1:+37812006 | None:intergenic |
| GAATTGGATCTTGCTCTTAT+TGG | 0.272650 | 5_1:-37814216 | Msa0729840:CDS |
| GGTTTCGAGATCTGAGAATA+AGG | 0.278971 | 5_1:+37814457 | None:intergenic |
| AATACAATATAACACAAAAC+TGG | 0.291548 | 5_1:+37810332 | None:intergenic |
| CATGGTTATGAACCTGATAT+TGG | 0.299253 | 5_1:-37813309 | Msa0729840:CDS |
| CACTGACTATAGTTGTATAA+TGG | 0.303717 | 5_1:-37810243 | Msa0729840:three_prime_UTR |
| CTCTGATAGTGGTCGGATCT+TGG | 0.309438 | 5_1:+37811601 | None:intergenic |
| ACCTGTGGTACCTGATGATC+TGG | 0.312493 | 5_1:-37811645 | Msa0729840:CDS |
| CAAACGTCTGGTTGCCTACT+TGG | 0.316619 | 5_1:-37812548 | Msa0729840:CDS |
| TACAACCATCTTGTTGCCTT+TGG | 0.316887 | 5_1:+37812507 | None:intergenic |
| TTTGCTGTCCTCAGATTTGC+AGG | 0.317388 | 5_1:+37811202 | None:intergenic |
| TCGAGCTTTGTTCCGGTACT+TGG | 0.319281 | 5_1:+37812336 | None:intergenic |
| GAGAGGGAGGGGTTTGAATT+GGG | 0.321559 | 5_1:+37814415 | None:intergenic |
| AACCAGTAGCAGTAACAAAT+TGG | 0.324131 | 5_1:-37812002 | Msa0729840:CDS |
| GCCACTTCGATTCCTCTTCC+GGG | 0.336825 | 5_1:+37811031 | None:intergenic |
| GAAGAAGAAAAGTGGTGAAT+TGG | 0.337606 | 5_1:-37814232 | Msa0729840:CDS |
| TCTCAAGACAGTGGGATTAG+AGG | 0.346778 | 5_1:-37811878 | Msa0729840:CDS |
| TCAAACTCTAGTGGTAGTTC+AGG | 0.347687 | 5_1:-37812184 | Msa0729840:CDS |
| CTCCAATTTGTTACTGCTAC+TGG | 0.349762 | 5_1:+37812000 | None:intergenic |
| GATGATGCCTGCATAAGTTT+TGG | 0.351627 | 5_1:-37810553 | Msa0729840:three_prime_UTR |
| TCGAAAGAATTCACATGGTT+AGG | 0.353444 | 5_1:-37813139 | Msa0729840:CDS |
| AAAGGAGCAAAAGAAGAGTT+TGG | 0.354739 | 5_1:+37814150 | None:intergenic |
| GGCAGGACTGTTTAACTTAG+TGG | 0.355651 | 5_1:-37810532 | Msa0729840:three_prime_UTR |
| TATGGCTTTGAAAGATAGAT+TGG | 0.360914 | 5_1:-37814367 | Msa0729840:CDS |
| GGAAAAGATGCTGTTGAGTT+TGG | 0.371402 | 5_1:-37812070 | Msa0729840:CDS |
| ATTGGAGGGTTCCGTAAAAC+TGG | 0.372559 | 5_1:-37811984 | Msa0729840:CDS |
| GGTGCAATATCACGACATTC+AGG | 0.372888 | 5_1:-37811807 | Msa0729840:CDS |
| ACTTGAGGCATTCTCGAGAT+TGG | 0.385275 | 5_1:-37811307 | Msa0729840:CDS |
| CTGAGTATTGAATGCATAGA+TGG | 0.388591 | 5_1:-37812391 | Msa0729840:CDS |
| GGTAAAACTTACATTATCAT+TGG | 0.398486 | 5_1:+37810435 | None:intergenic |
| GAAACCACTATCAGGCATTT+CGG | 0.399594 | 5_1:-37813090 | Msa0729840:CDS |
| GAGCGTGTCGAGCTTTGTTC+CGG | 0.399625 | 5_1:+37812329 | None:intergenic |
| ACTGACTATAGTTGTATAAT+GGG | 0.402689 | 5_1:-37810242 | Msa0729840:three_prime_UTR |
| GAAAAGAAGAAACCACTATC+AGG | 0.403767 | 5_1:-37813098 | Msa0729840:CDS |
| ATTTCAGAAGAGAGAGGGAG+GGG | 0.404611 | 5_1:+37814404 | None:intergenic |
| ACTAAAACAAGATAACTAGA+AGG | 0.407365 | 5_1:+37810624 | None:intergenic |
| CGAAAGAATTCACATGGTTA+GGG | 0.407738 | 5_1:-37813138 | Msa0729840:CDS |
| ATCTGATGATGGACCAGAAC+TGG | 0.408102 | 5_1:-37812158 | Msa0729840:CDS |
| AATAATGTGTTTCTGCTAAG+TGG | 0.408845 | 5_1:+37810747 | None:intergenic |
| AGGCATCATCCTTGCTTCCT+AGG | 0.410713 | 5_1:+37810566 | None:intergenic |
| GGCATCATCCTTGCTTCCTA+GGG | 0.416742 | 5_1:+37810567 | None:intergenic |
| AGAACATCCTTCACAAGATC+TGG | 0.423521 | 5_1:+37811080 | None:intergenic |
| GCCCATGCATTGTGTAACTT+TGG | 0.423958 | 5_1:-37810458 | Msa0729840:three_prime_UTR |
| TTGGTAAAGAGAAGAGTTCT+AGG | 0.425787 | 5_1:-37814197 | Msa0729840:CDS |
| ATGTTCTATCATTGCAGTTA+AGG | 0.427787 | 5_1:-37811064 | Msa0729840:CDS |
| TCTTCCGAAATGCCTGATAG+TGG | 0.428929 | 5_1:+37813086 | None:intergenic |
| AAAAGACTAGCACCTAAGTT+AGG | 0.429154 | 5_1:+37810652 | None:intergenic |
| GTCTTATCGCAGAAGAAGAA+TGG | 0.435159 | 5_1:+37812125 | None:intergenic |
| TTCATTTGTCTCTTTGATTG+TGG | 0.435179 | 5_1:+37811943 | None:intergenic |
| AAATATCATGTTTATTTCCC+AGG | 0.439067 | 5_1:-37811476 | Msa0729840:intron |
| TGTGGTTCCAGCTTCATTGA+AGG | 0.440047 | 5_1:-37810925 | Msa0729840:CDS |
| CAACGGTATACAAAGGTTGA+TGG | 0.440953 | 5_1:-37812091 | Msa0729840:CDS |
| AACTGTGTTCTTCCTAACTT+AGG | 0.443471 | 5_1:-37810664 | Msa0729840:three_prime_UTR |
| ATGCTGCACACAAATGGTTC+TGG | 0.443794 | 5_1:+37812304 | None:intergenic |
| TTGGTTACATTGTTGATGCC+TGG | 0.452161 | 5_1:-37811550 | Msa0729840:CDS |
| TATCAGGCATTTCGGAAGAA+TGG | 0.453187 | 5_1:-37813082 | Msa0729840:CDS |
| CTCTTTGATTGTGGCCAACA+TGG | 0.457476 | 5_1:+37811952 | None:intergenic |
| ATTCCACGTTTCTCTGATAG+TGG | 0.459062 | 5_1:+37811590 | None:intergenic |
| AAATTCGTGTCGATGGATAA+AGG | 0.465202 | 5_1:-37814279 | Msa0729840:CDS |
| TTTGTGTGCAGCATGAAGTT+TGG | 0.466311 | 5_1:-37812295 | Msa0729840:CDS |
| AACTTCATGCTGCACACAAA+TGG | 0.471996 | 5_1:+37812298 | None:intergenic |
| AGCAGAGGAGAACAAACGTC+TGG | 0.475317 | 5_1:-37812560 | Msa0729840:CDS |
| AGGCATTCTCGAGATTGGAC+AGG | 0.478147 | 5_1:-37811302 | Msa0729840:CDS |
| GCAATACAAATCACAACATC+AGG | 0.478236 | 5_1:+37811251 | None:intergenic |
| ACAAGATGGTTGTAGTTCGC+TGG | 0.484731 | 5_1:-37812498 | Msa0729840:CDS |
| TTACTCGGGTTCTTCTGAAA+AGG | 0.491451 | 5_1:-37811129 | Msa0729840:CDS |
| ATACTCAGACGTTGAAGATA+AGG | 0.493320 | 5_1:+37812406 | None:intergenic |
| TACAGCCATATTCGCATCCC+TGG | 0.493560 | 5_1:+37813338 | None:intergenic |
| TGATCAACCTTCAATGAAGC+TGG | 0.494247 | 5_1:+37810918 | None:intergenic |
| GACAGGGAATGGATGGGTAA+AGG | 0.496000 | 5_1:-37811285 | Msa0729840:CDS |
| CACGACTGAGGTACTGAAAA+GGG | 0.497322 | 5_1:+37810866 | None:intergenic |
| TGGTTAGATTCTATTGTTCA+AGG | 0.498161 | 5_1:-37814093 | Msa0729840:intron |
| TCTCGAGATTGGACAGGGAA+TGG | 0.498663 | 5_1:-37811296 | Msa0729840:CDS |
| GGCCAAAGTTACACAATGCA+TGG | 0.499526 | 5_1:+37810456 | None:intergenic |
| AATTTCAGAAGAGAGAGGGA+GGG | 0.500264 | 5_1:+37814403 | None:intergenic |
| GCTTCACAGTATTTAGCTGT+AGG | 0.501148 | 5_1:-37811920 | Msa0729840:CDS |
| GAGATTGGACAGGGAATGGA+TGG | 0.504271 | 5_1:-37811292 | Msa0729840:CDS |
| TGGGAGATGGAATACAATCT+AGG | 0.504917 | 5_1:-37811163 | Msa0729840:CDS |
| GGGATTTATAGAGAGTGTCT+AGG | 0.505081 | 5_1:+37814435 | None:intergenic |
| ACTCGGAGACCCAGATCATC+AGG | 0.505580 | 5_1:+37811635 | None:intergenic |
| CTCTCTTTCACTAAAACTGT+GGG | 0.505684 | 5_1:+37812441 | None:intergenic |
| ATTGTATCAACTCAGCATTA+CGG | 0.507228 | 5_1:+37810286 | None:intergenic |
| GGATTTATAGAGAGTGTCTA+GGG | 0.510376 | 5_1:+37814436 | None:intergenic |
| CGAGAATGCCTCAAGTTACA+TGG | 0.511581 | 5_1:+37811314 | None:intergenic |
| TTTCACAGAATTGATGAGGT+TGG | 0.514249 | 5_1:-37812475 | Msa0729840:CDS |
| GCACGACTGAGGTACTGAAA+AGG | 0.515664 | 5_1:+37810865 | None:intergenic |
| AGCTGTAGGTTCCAATGTTG+AGG | 0.516100 | 5_1:-37811906 | Msa0729840:CDS |
| GAATTTCAGAAGAGAGAGGG+AGG | 0.516137 | 5_1:+37814402 | None:intergenic |
| CTTAGTGGAATAACCAACAT+TGG | 0.520340 | 5_1:-37810517 | Msa0729840:three_prime_UTR |
| ACCTGATATTGGAACATTGA+AGG | 0.521621 | 5_1:-37813298 | Msa0729840:intron |
| GAATGGATGGGTAAAGGTGA+GGG | 0.525927 | 5_1:-37811279 | Msa0729840:CDS |
| CATGTGAATTCTTTCGAACA+AGG | 0.525964 | 5_1:+37813145 | None:intergenic |
| CACGTTTCTCTGATAGTGGT+CGG | 0.528328 | 5_1:+37811594 | None:intergenic |
| AACTGGGGATAATGTAAAGA+AGG | 0.531780 | 5_1:+37810349 | None:intergenic |
| CACAGCACTACGCCAAGTAC+CGG | 0.531875 | 5_1:-37812348 | Msa0729840:CDS |
| TTCTATCATTGCAGTTAAGG+TGG | 0.537549 | 5_1:-37811061 | Msa0729840:CDS |
| CCTCTCTTTCACTAAAACTG+TGG | 0.537595 | 5_1:+37812440 | None:intergenic |
| CTAGGGCTTCAAATAAAATG+AGG | 0.538796 | 5_1:+37810584 | None:intergenic |
| GTTTCGAGATCTGAGAATAA+GGG | 0.539870 | 5_1:+37814458 | None:intergenic |
| TGGCATGATGGATGGTGGGA+AGG | 0.540826 | 5_1:-37811527 | Msa0729840:CDS |
| ATAATGTGTTTCTGCTAAGT+GGG | 0.541510 | 5_1:+37810748 | None:intergenic |
| ATGCCTGGTGGCATGATGGA+TGG | 0.541595 | 5_1:-37811535 | Msa0729840:CDS |
| AGTCCTGCCAAAACTTATGC+AGG | 0.544229 | 5_1:+37810546 | None:intergenic |
| TAATCCCACTGTCTTGAGAA+AGG | 0.544522 | 5_1:+37811882 | None:intergenic |
| AGGTGTGATAAAATAACAAA+GGG | 0.545163 | 5_1:+37810369 | None:intergenic |
| CCACCATCCATCATGCCACC+AGG | 0.546255 | 5_1:+37811532 | None:intergenic |
| GGTGGAAGTCATCCCGGAAG+AGG | 0.547048 | 5_1:-37811043 | Msa0729840:CDS |
| ACTGTAGCATCTATGGGAGA+TGG | 0.548639 | 5_1:-37811176 | Msa0729840:CDS |
| CCCAGATCATCAGGTACCAC+AGG | 0.548955 | 5_1:+37811644 | None:intergenic |
| CGGTACTTGGCGTAGTGCTG+TGG | 0.549279 | 5_1:+37812349 | None:intergenic |
| AAGAAAACAAGGCACAAGAA+AGG | 0.549533 | 5_1:+37810414 | None:intergenic |
| AGATGGAATACAATCTAGGC+AGG | 0.549756 | 5_1:-37811159 | Msa0729840:CDS |
| ATTGAATTTCAGAAGAGAGA+GGG | 0.549859 | 5_1:+37814399 | None:intergenic |
| CTGGTTTCACAGAATTGATG+AGG | 0.549883 | 5_1:-37812479 | Msa0729840:CDS |
| AGGTCCTTTCTCAAGACAGT+GGG | 0.550812 | 5_1:-37811886 | Msa0729840:CDS |
| ATTTGAAGCCCTAGGAAGCA+AGG | 0.551675 | 5_1:-37810575 | Msa0729840:three_prime_UTR |
| GGAAGAGAAATTCGTGTCGA+TGG | 0.551967 | 5_1:-37814286 | Msa0729840:CDS |
| TAGGCAGGCTGATACTTACT+CGG | 0.552436 | 5_1:-37811144 | Msa0729840:CDS |
| CAAACTCTAGTGGTAGTTCA+GGG | 0.555530 | 5_1:-37812183 | Msa0729840:CDS |
| CATTGGCTTTGACTTTAGGA+TGG | 0.557555 | 5_1:-37810500 | Msa0729840:three_prime_UTR |
| GTTTGGTAAGGATGATGTCA+AGG | 0.560830 | 5_1:-37812278 | Msa0729840:CDS |
| ATACAATATAACACAAAACT+GGG | 0.561653 | 5_1:+37810333 | None:intergenic |
| GGCATTCTCGAGATTGGACA+GGG | 0.564326 | 5_1:-37811301 | Msa0729840:CDS |
| CCTGGTGGCATGATGGATGG+TGG | 0.564674 | 5_1:-37811532 | Msa0729840:CDS |
| GCCAAAGTTACACAATGCAT+GGG | 0.565270 | 5_1:+37810457 | None:intergenic |
| CTTGTTCGAAAGAATTCACA+TGG | 0.569612 | 5_1:-37813144 | Msa0729840:CDS |
| GATGGGTAAAGGTGAGGGAA+AGG | 0.570981 | 5_1:-37811274 | Msa0729840:CDS |
| CCTAAAGTCAAAGCCAATGT+TGG | 0.571783 | 5_1:+37810504 | None:intergenic |
| TTGAGAAAGGACCTCAACAT+TGG | 0.572530 | 5_1:+37811895 | None:intergenic |
| CTGGTGGCATGATGGATGGT+GGG | 0.572784 | 5_1:-37811531 | Msa0729840:CDS |
| GGAATGGATGGGTAAAGGTG+AGG | 0.573465 | 5_1:-37811280 | Msa0729840:CDS |
| GCATCAGACTGCAGAAACTT+CGG | 0.573906 | 5_1:+37810960 | None:intergenic |
| AACAGAGCAATGACATACAT+AGG | 0.575434 | 5_1:-37810992 | Msa0729840:CDS |
| AAATCAACTGTAGCATCTAT+GGG | 0.576521 | 5_1:-37811182 | Msa0729840:CDS |
| GAGGGTTCCGTAAAACTGGT+TGG | 0.578848 | 5_1:-37811980 | Msa0729840:CDS |
| GTTGATGCCTGGTGGCATGA+TGG | 0.579936 | 5_1:-37811539 | Msa0729840:CDS |
| CAGTAGCAGTAACAAATTGG+AGG | 0.580384 | 5_1:-37811999 | Msa0729840:CDS |
| ACAGTGGGATTAGAGGATGT+TGG | 0.582052 | 5_1:-37811871 | Msa0729840:CDS |
| AGTTAAGGTGGAAGTCATCC+CGG | 0.583831 | 5_1:-37811049 | Msa0729840:CDS |
| AAAATGAGGCTCCGATGCCA+CGG | 0.583979 | 5_1:+37810598 | None:intergenic |
| CTAAAACAAGATAACTAGAA+GGG | 0.585095 | 5_1:+37810625 | None:intergenic |
| CCTGTGGTACCTGATGATCT+GGG | 0.587162 | 5_1:-37811644 | Msa0729840:CDS |
| GAAACGTGGAATATCATTCG+TGG | 0.587500 | 5_1:-37811579 | Msa0729840:CDS |
| TTAGAGCTTCTGTTATCAAG+AGG | 0.589868 | 5_1:-37811847 | Msa0729840:CDS |
| ATATCATTCGTGGGTGATGT+TGG | 0.590093 | 5_1:-37811569 | Msa0729840:CDS |
| TTTGATATAACTCAAATGGA+GGG | 0.591359 | 5_1:-37812253 | Msa0729840:CDS |
| TCTTGGTCCTCTCATCTACT+CGG | 0.592590 | 5_1:+37811618 | None:intergenic |
| TCACGATGACTATAAATACC+AGG | 0.594651 | 5_1:-37810898 | Msa0729840:CDS |
| AAGGTGTGATAAAATAACAA+AGG | 0.597073 | 5_1:+37810368 | None:intergenic |
| AGTTCAGGGAAATCTGATGA+TGG | 0.598540 | 5_1:-37812169 | Msa0729840:CDS |
| ATGTGTAGATGACTCCATGT+TGG | 0.599392 | 5_1:-37810822 | Msa0729840:exon |
| CTCGTACATGTCTTCCAAGT+AGG | 0.600078 | 5_1:+37812534 | None:intergenic |
| CACTAGAGTTTGACTCCACG+TGG | 0.600930 | 5_1:+37812194 | None:intergenic |
| TTGATACAATCAATTCTCAA+AGG | 0.601248 | 5_1:-37810273 | Msa0729840:three_prime_UTR |
| GACATGTACGAGGGTTCCAA+AGG | 0.601793 | 5_1:-37812523 | Msa0729840:CDS |
| TAGGGTTACCATGGACATGT+AGG | 0.604350 | 5_1:-37813120 | Msa0729840:CDS |
| TCACATGGTTAGGGTTACCA+TGG | 0.605975 | 5_1:-37813129 | Msa0729840:CDS |
| AATTGAATTTCAGAAGAGAG+AGG | 0.609828 | 5_1:+37814398 | None:intergenic |
| TATTTGCACCATGTAACTTG+AGG | 0.611537 | 5_1:-37811322 | Msa0729840:CDS |
| CGTGCCGTCTTTAACCAACA+TGG | 0.612820 | 5_1:-37810847 | Msa0729840:CDS |
| ACAAAGTTCCTGCAAATCTG+AGG | 0.617490 | 5_1:-37811210 | Msa0729840:CDS |
| ATGTGAATTCTTTCGAACAA+GGG | 0.618649 | 5_1:+37813146 | None:intergenic |
| AGGCAGGCTGATACTTACTC+GGG | 0.619512 | 5_1:-37811143 | Msa0729840:CDS |
| GTGCAGCATGAAGTTTGGTA+AGG | 0.624560 | 5_1:-37812290 | Msa0729840:CDS |
| ACTATAGTTGTATAATGGGG+TGG | 0.625920 | 5_1:-37810238 | Msa0729840:three_prime_UTR |
| GAGGTCCTTTCTCAAGACAG+TGG | 0.626786 | 5_1:-37811887 | Msa0729840:CDS |
| AAACGTGGAATATCATTCGT+GGG | 0.627151 | 5_1:-37811578 | Msa0729840:CDS |
| ACTGGTTGGAACCACCATGT+TGG | 0.627998 | 5_1:-37811966 | Msa0729840:CDS |
| ATAACCATGTTGGTTAAAGA+CGG | 0.629339 | 5_1:+37810843 | None:intergenic |
| GGGTTCCAAAGGCAACAAGA+TGG | 0.630417 | 5_1:-37812512 | Msa0729840:CDS |
| ATGCATGGGCTTGCAAACAA+TGG | 0.630453 | 5_1:+37810471 | None:intergenic |
| TCGAGATCTGAGAATAAGGG+AGG | 0.631655 | 5_1:+37814461 | None:intergenic |
| GTTACATTGTTGATGCCTGG+TGG | 0.632805 | 5_1:-37811547 | Msa0729840:CDS |
| TGGCGTAGTGCTGTGGACTG+AGG | 0.634382 | 5_1:+37812356 | None:intergenic |
| TGAAAAGGGAAGGATCTCCC+TGG | 0.634582 | 5_1:+37810880 | None:intergenic |
| GGTTAAAGACGGCACGACTG+AGG | 0.642530 | 5_1:+37810854 | None:intergenic |
| TTTGATTGTGGCCAACATGG+TGG | 0.644045 | 5_1:+37811955 | None:intergenic |
| GAAGAAGCAACGGTATACAA+AGG | 0.647513 | 5_1:-37812098 | Msa0729840:CDS |
| CACGTGGAGTCAAACTCTAG+TGG | 0.647874 | 5_1:-37812193 | Msa0729840:CDS |
| TCATCTACACATAACCATGT+TGG | 0.651118 | 5_1:+37810833 | None:intergenic |
| CTAGAGTTTGACTCCACGTG+GGG | 0.651840 | 5_1:+37812196 | None:intergenic |
| TGGGTCTCCGAGTAGATGAG+AGG | 0.656912 | 5_1:-37811625 | Msa0729840:CDS |
| TAAGACCAAAGAAGAAGCAA+CGG | 0.657790 | 5_1:-37812108 | Msa0729840:CDS |
| CACGATGACTATAAATACCA+GGG | 0.659671 | 5_1:-37810897 | Msa0729840:CDS |
| TCACGACATTCAGGATGCAG+AGG | 0.660192 | 5_1:-37811798 | Msa0729840:CDS |
| AAAGACATTTCAAGAAAACA+AGG | 0.661133 | 5_1:+37810403 | None:intergenic |
| AGTAGCAGTAACAAATTGGA+GGG | 0.663327 | 5_1:-37811998 | Msa0729840:CDS |
| CTACTTGGAAGACATGTACG+AGG | 0.672183 | 5_1:-37812533 | Msa0729840:CDS |
| GGATAAACTTAGAAAGACTG+AGG | 0.673810 | 5_1:-37811108 | Msa0729840:CDS |
| GGAAGTTCCAGATCTTGTGA+AGG | 0.675883 | 5_1:-37811087 | Msa0729840:CDS |
| GAGGCACAAAGACAAAGTGA+AGG | 0.676396 | 5_1:-37811828 | Msa0729840:CDS |
| ACTGAGGTACTGAAAAGGGA+AGG | 0.680700 | 5_1:+37810870 | None:intergenic |
| TACAATATAACACAAAACTG+GGG | 0.683323 | 5_1:+37810334 | None:intergenic |
| TTATCGCAGAAGAAGAATGG+AGG | 0.692820 | 5_1:+37812128 | None:intergenic |
| GATGGATAAAGGTAGAAGAG+AGG | 0.693154 | 5_1:-37814268 | Msa0729840:CDS |
| AATATGGCTGTAGAGAAACA+TGG | 0.702173 | 5_1:-37813327 | Msa0729840:CDS |
| TCCCGGAAGAGGAATCGAAG+TGG | 0.703286 | 5_1:-37811032 | Msa0729840:CDS |
| ACTAGAGTTTGACTCCACGT+GGG | 0.704632 | 5_1:+37812195 | None:intergenic |
| CGACCACTATCAGAGAAACG+TGG | 0.706299 | 5_1:-37811593 | Msa0729840:CDS |
| TACTTGGAAGACATGTACGA+GGG | 0.709651 | 5_1:-37812532 | Msa0729840:CDS |
| ATGTGTTTCTGCTAAGTGGG+AGG | 0.713340 | 5_1:+37810751 | None:intergenic |
| GTAGTGCTGTGGACTGAGGA+CGG | 0.713773 | 5_1:+37812360 | None:intergenic |
| AGATTGGACAGGGAATGGAT+GGG | 0.719923 | 5_1:-37811291 | Msa0729840:CDS |
| ACTCACTTACATTATATACG+AGG | 0.742796 | 5_1:+37810150 | None:intergenic |
| TCTCTTTCACTAAAACTGTG+GGG | 0.748073 | 5_1:+37812442 | None:intergenic |
| CTGACTATAGTTGTATAATG+GGG | 0.750802 | 5_1:-37810241 | Msa0729840:three_prime_UTR |
| GAAGCAAATGTATCCCCACG+TGG | 0.785568 | 5_1:-37812209 | Msa0729840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGATACAAAATTAATTTA+GGG | + | chr5_1:37811398-37811417 | None:intergenic | 10.0% |
| !! | ATTTGATACAAAATTAATTT+AGG | + | chr5_1:37811399-37811418 | None:intergenic | 10.0% |
| !!! | TTTATATTTTTCATTAGTAT+TGG | - | chr5_1:37812883-37812902 | Msa0729840:intron | 10.0% |
| !!! | TTTTTTATTAATTTTCTTGA+AGG | - | chr5_1:37812934-37812953 | Msa0729840:intron | 10.0% |
| !! | AAATTCAATTATCGTTATTA+TGG | - | chr5_1:37810236-37810255 | Msa0729840:three_prime_UTR | 15.0% |
| !!! | TTTTTAAAAGAACCAAAATT+AGG | + | chr5_1:37810583-37810602 | None:intergenic | 15.0% |
| !! | TGTTAAGATTAATTAAGAAA+GGG | + | chr5_1:37810708-37810727 | None:intergenic | 15.0% |
| !! | TTGTTAAGATTAATTAAGAA+AGG | + | chr5_1:37810709-37810728 | None:intergenic | 15.0% |
| !! | ACGATTAATTAAGAAAATTA+AGG | + | chr5_1:37810758-37810777 | None:intergenic | 15.0% |
| !!! | AATTATTGTTTTCATTGATT+AGG | - | chr5_1:37811084-37811103 | Msa0729840:CDS | 15.0% |
| !! | AAAATCAAAATAATTCAATG+AGG | + | chr5_1:37811428-37811447 | None:intergenic | 15.0% |
| !!! | TTGAATTATTTTGATTTTTC+AGG | - | chr5_1:37811430-37811449 | Msa0729840:intron | 15.0% |
| !!! | GATTTTTTGTTTTTGTTTTC+TGG | - | chr5_1:37811185-37811204 | Msa0729840:CDS | 20.0% |
| !!! | ATGTGTAAAATATTTTACAC+TGG | + | chr5_1:37811629-37811648 | None:intergenic | 20.0% |
| !!! | CAAAGATTGTTTTTAATTGT+TGG | + | chr5_1:37811743-37811762 | None:intergenic | 20.0% |
| !!! | ATATCTCTTTTTTGTTTCTT+TGG | - | chr5_1:37811784-37811803 | Msa0729840:CDS | 20.0% |
| !!! | TATTAATTTTCTTGAAGGAA+TGG | - | chr5_1:37812939-37812958 | Msa0729840:intron | 20.0% |
| !! | ATACAATATAACACAAAACT+GGG | + | chr5_1:37814291-37814310 | None:intergenic | 20.0% |
| !! | AATACAATATAACACAAAAC+TGG | + | chr5_1:37814292-37814311 | None:intergenic | 20.0% |
| !!! | TATTTTCTGAAGAAGAAAAG+TGG | - | chr5_1:37810381-37810400 | Msa0729840:three_prime_UTR | 25.0% |
| !! | TGCTTTCTTTTACCTAATTT+TGG | - | chr5_1:37810568-37810587 | Msa0729840:three_prime_UTR | 25.0% |
| !! | ATGAACTATTTGATCTGTTT+TGG | - | chr5_1:37810617-37810636 | Msa0729840:three_prime_UTR | 25.0% |
| ! | GTTAATTCGAATCTTAATTC+TGG | - | chr5_1:37810649-37810668 | Msa0729840:three_prime_UTR | 25.0% |
| ! | TCATCTTAATTCGATAATTC+TGG | - | chr5_1:37810823-37810842 | Msa0729840:exon | 25.0% |
| ! | CATCATAATTGGTAAAAAAG+GGG | + | chr5_1:37811601-37811620 | None:intergenic | 25.0% |
| ! | GCATCATAATTGGTAAAAAA+GGG | + | chr5_1:37811602-37811621 | None:intergenic | 25.0% |
| ! | AGCATCATAATTGGTAAAAA+AGG | + | chr5_1:37811603-37811622 | None:intergenic | 25.0% |
| ! | AACTATTAACAGATTGTGAT+TGG | + | chr5_1:37811657-37811676 | None:intergenic | 25.0% |
| ! | ACAATCTGTTAATAGTTGTT+TGG | - | chr5_1:37811660-37811679 | Msa0729840:CDS | 25.0% |
| !!! | GCAAAGATTGTTTTTATTGT+TGG | + | chr5_1:37811892-37811911 | None:intergenic | 25.0% |
| !!! | ATATCTCTGTTTTGTTTCTT+TGG | - | chr5_1:37811932-37811951 | Msa0729840:CDS | 25.0% |
| !!! | GGATTTTGATATAACTCAAA+TGG | - | chr5_1:37812364-37812383 | Msa0729840:CDS | 25.0% |
| !! | TTTTGATATAACTCAAATGG+AGG | - | chr5_1:37812367-37812386 | Msa0729840:CDS | 25.0% |
| ! | TTTGATATAACTCAAATGGA+GGG | - | chr5_1:37812368-37812387 | Msa0729840:CDS | 25.0% |
| ! | AAATATCATGTTTATTTCCC+AGG | - | chr5_1:37813145-37813164 | Msa0729840:CDS | 25.0% |
| ! | TAGAAAGAAAAAAACCAACA+TGG | + | chr5_1:37813816-37813835 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTTCTTTCTAGAA+TGG | - | chr5_1:37813819-37813838 | Msa0729840:intron | 25.0% |
| ! | GAAGAAAATAACCTAAAAAG+TGG | + | chr5_1:37813848-37813867 | None:intergenic | 25.0% |
| ! | CTAAAACAAGATAACTAGAA+GGG | + | chr5_1:37813999-37814018 | None:intergenic | 25.0% |
| ! | ACTAAAACAAGATAACTAGA+AGG | + | chr5_1:37814000-37814019 | None:intergenic | 25.0% |
| ! | GGTAAAACTTACATTATCAT+TGG | + | chr5_1:37814189-37814208 | None:intergenic | 25.0% |
| ! | AAAGACATTTCAAGAAAACA+AGG | + | chr5_1:37814221-37814240 | None:intergenic | 25.0% |
| ! | AGGTGTGATAAAATAACAAA+GGG | + | chr5_1:37814255-37814274 | None:intergenic | 25.0% |
| ! | AAGGTGTGATAAAATAACAA+AGG | + | chr5_1:37814256-37814275 | None:intergenic | 25.0% |
| ! | TACAATATAACACAAAACTG+GGG | + | chr5_1:37814290-37814309 | None:intergenic | 25.0% |
| ! | TTGATACAATCAATTCTCAA+AGG | - | chr5_1:37814348-37814367 | Msa0729840:CDS | 25.0% |
| ! | ACTGACTATAGTTGTATAAT+GGG | - | chr5_1:37814379-37814398 | Msa0729840:exon | 25.0% |
| ATTGAATTTCAGAAGAGAGA+GGG | + | chr5_1:37810225-37810244 | None:intergenic | 30.0% | |
| AATTGAATTTCAGAAGAGAG+AGG | + | chr5_1:37810226-37810245 | None:intergenic | 30.0% | |
| !! | TATGGCTTTGAAAGATAGAT+TGG | - | chr5_1:37810254-37810273 | Msa0729840:three_prime_UTR | 30.0% |
| ATGAAAAAAGATACGTTACG+TGG | - | chr5_1:37810313-37810332 | Msa0729840:three_prime_UTR | 30.0% | |
| TGAAAAAAGATACGTTACGT+GGG | - | chr5_1:37810314-37810333 | Msa0729840:three_prime_UTR | 30.0% | |
| CGCGATTTAAGTCTAAAAAA+AGG | + | chr5_1:37810492-37810511 | None:intergenic | 30.0% | |
| TGGTTAGATTCTATTGTTCA+AGG | - | chr5_1:37810528-37810547 | Msa0729840:three_prime_UTR | 30.0% | |
| TAGACAAAACCAAATGCAAA+AGG | + | chr5_1:37810896-37810915 | None:intergenic | 30.0% | |
| !!! | TGTCACTGATTATTGGTTTT+TGG | - | chr5_1:37810946-37810965 | Msa0729840:CDS | 30.0% |
| CAGTGATATTAATAAGCGAA+GGG | + | chr5_1:37811144-37811163 | None:intergenic | 30.0% | |
| TCAGTGATATTAATAAGCGA+AGG | + | chr5_1:37811145-37811164 | None:intergenic | 30.0% | |
| TGAAAATTTCAGAGGTAAAC+AGG | + | chr5_1:37811253-37811272 | None:intergenic | 30.0% | |
| GAAGAATCTGAAAATTTCAG+AGG | + | chr5_1:37811261-37811280 | None:intergenic | 30.0% | |
| ! | AATTTTCAGATTCTTCTTCC+AGG | - | chr5_1:37811265-37811284 | Msa0729840:CDS | 30.0% |
| ! | ATTTTCAGATTCTTCTTCCA+GGG | - | chr5_1:37811266-37811285 | Msa0729840:CDS | 30.0% |
| ATGTGAATTCTTTCGAACAA+GGG | + | chr5_1:37811478-37811497 | None:intergenic | 30.0% | |
| TTATTGTTGGTCGATTACAA+CGG | + | chr5_1:37811879-37811898 | None:intergenic | 30.0% | |
| GTCAGATTACAATACATTTG+AGG | + | chr5_1:37811971-37811990 | None:intergenic | 30.0% | |
| !!! | TTTTGTGTTTGTTTTAGCAG+AGG | - | chr5_1:37812046-37812065 | Msa0729840:CDS | 30.0% |
| TTCATTTGTCTCTTTGATTG+TGG | + | chr5_1:37812681-37812700 | None:intergenic | 30.0% | |
| GTACAGAATATAAGAACAGA+AGG | + | chr5_1:37813176-37813195 | None:intergenic | 30.0% | |
| ACAGAGCATACACAAAATTA+TGG | + | chr5_1:37813198-37813217 | None:intergenic | 30.0% | |
| TTTGTCGTCCTTGTAATATT+AGG | - | chr5_1:37813225-37813244 | Msa0729840:intron | 30.0% | |
| ATAAGACGCCTAATATTACA+AGG | + | chr5_1:37813236-37813255 | None:intergenic | 30.0% | |
| AAATCAACTGTAGCATCTAT+GGG | - | chr5_1:37813439-37813458 | Msa0729840:intron | 30.0% | |
| ATGTTCTATCATTGCAGTTA+AGG | - | chr5_1:37813557-37813576 | Msa0729840:intron | 30.0% | |
| ! | ATAACCATGTTGGTTAAAGA+CGG | + | chr5_1:37813781-37813800 | None:intergenic | 30.0% |
| ! | ATAATGTGTTTCTGCTAAGT+GGG | + | chr5_1:37813876-37813895 | None:intergenic | 30.0% |
| ! | AATAATGTGTTTCTGCTAAG+TGG | + | chr5_1:37813877-37813896 | None:intergenic | 30.0% |
| !! | ATGAGAAAAAAGGCATTGAA+TGG | + | chr5_1:37813928-37813947 | None:intergenic | 30.0% |
| !!! | ATTCAATGCCTTTTTTCTCA+TGG | - | chr5_1:37813927-37813946 | Msa0729840:intron | 30.0% |
| TGAAGAAACCATGAGAAAAA+AGG | + | chr5_1:37813938-37813957 | None:intergenic | 30.0% | |
| !!! | TATCTTGTTTTAGTATTCCG+TGG | - | chr5_1:37814006-37814025 | Msa0729840:intron | 30.0% |
| ATTGTATCAACTCAGCATTA+CGG | + | chr5_1:37814338-37814357 | None:intergenic | 30.0% | |
| ! | CACTGACTATAGTTGTATAA+TGG | - | chr5_1:37814378-37814397 | Msa0729840:exon | 30.0% |
| CTGACTATAGTTGTATAATG+GGG | - | chr5_1:37814380-37814399 | Msa0729840:exon | 30.0% | |
| GTTTCGAGATCTGAGAATAA+GGG | + | chr5_1:37810166-37810185 | None:intergenic | 35.0% | |
| !! | GGATTTATAGAGAGTGTCTA+GGG | + | chr5_1:37810188-37810207 | None:intergenic | 35.0% |
| ! | AAATTCGTGTCGATGGATAA+AGG | - | chr5_1:37810342-37810361 | Msa0729840:three_prime_UTR | 35.0% |
| GAAGAAGAAAAGTGGTGAAT+TGG | - | chr5_1:37810389-37810408 | Msa0729840:three_prime_UTR | 35.0% | |
| GAATTGGATCTTGCTCTTAT+TGG | - | chr5_1:37810405-37810424 | Msa0729840:three_prime_UTR | 35.0% | |
| TTGGTAAAGAGAAGAGTTCT+AGG | - | chr5_1:37810424-37810443 | Msa0729840:three_prime_UTR | 35.0% | |
| AAAGGAGCAAAAGAAGAGTT+TGG | + | chr5_1:37810474-37810493 | None:intergenic | 35.0% | |
| ! | CGATAATTCTGGTCTTTCAT+TGG | - | chr5_1:37810834-37810853 | Msa0729840:CDS | 35.0% |
| ! | TAGTCTGTTCCTTTTGCATT+TGG | - | chr5_1:37810884-37810903 | Msa0729840:CDS | 35.0% |
| !! | GGTTTTGTGTCACTGATTAT+TGG | - | chr5_1:37810939-37810958 | Msa0729840:CDS | 35.0% |
| !!! | TGGTTTTGTGTCACGATTTT+TGG | - | chr5_1:37810966-37810985 | Msa0729840:CDS | 35.0% |
| !!! | GTGTCACGATTTTTGGTTTT+TGG | - | chr5_1:37810973-37810992 | Msa0729840:CDS | 35.0% |
| TTAATAAGCGAAGGGATTCA+AGG | + | chr5_1:37811136-37811155 | None:intergenic | 35.0% | |
| AATATGGCTGTAGAGAAACA+TGG | - | chr5_1:37811294-37811313 | Msa0729840:CDS | 35.0% | |
| CATGGTTATGAACCTGATAT+TGG | - | chr5_1:37811312-37811331 | Msa0729840:CDS | 35.0% | |
| ACCTGATATTGGAACATTGA+AGG | - | chr5_1:37811323-37811342 | Msa0729840:CDS | 35.0% | |
| ACCTTCAATGTTCCAATATC+AGG | + | chr5_1:37811327-37811346 | None:intergenic | 35.0% | |
| CATGTGAATTCTTTCGAACA+AGG | + | chr5_1:37811479-37811498 | None:intergenic | 35.0% | |
| CTTGTTCGAAAGAATTCACA+TGG | - | chr5_1:37811477-37811496 | Msa0729840:CDS | 35.0% | |
| TCGAAAGAATTCACATGGTT+AGG | - | chr5_1:37811482-37811501 | Msa0729840:CDS | 35.0% | |
| CGAAAGAATTCACATGGTTA+GGG | - | chr5_1:37811483-37811502 | Msa0729840:CDS | 35.0% | |
| GAAAAGAAGAAACCACTATC+AGG | - | chr5_1:37811523-37811542 | Msa0729840:CDS | 35.0% | |
| TTGGCTATTTGTCAGTTGTA+TGG | - | chr5_1:37811803-37811822 | Msa0729840:CDS | 35.0% | |
| !! | GCTTTCGCAAATTGATTTTC+AGG | - | chr5_1:37812016-37812035 | Msa0729840:CDS | 35.0% |
| TTTCACAGAATTGATGAGGT+TGG | - | chr5_1:37812146-37812165 | Msa0729840:CDS | 35.0% | |
| TCTCTTTCACTAAAACTGTG+GGG | + | chr5_1:37812182-37812201 | None:intergenic | 35.0% | |
| CTCTCTTTCACTAAAACTGT+GGG | + | chr5_1:37812183-37812202 | None:intergenic | 35.0% | |
| ATACTCAGACGTTGAAGATA+AGG | + | chr5_1:37812218-37812237 | None:intergenic | 35.0% | |
| !! | CTGAGTATTGAATGCATAGA+TGG | - | chr5_1:37812230-37812249 | Msa0729840:CDS | 35.0% |
| TAACTCAAATGGAGGGTTAT+TGG | - | chr5_1:37812375-37812394 | Msa0729840:CDS | 35.0% | |
| TAAGACCAAAGAAGAAGCAA+CGG | - | chr5_1:37812513-37812532 | Msa0729840:CDS | 35.0% | |
| !!! | TTTGTTACTGCTACTGGTTT+TGG | + | chr5_1:37812618-37812637 | None:intergenic | 35.0% |
| AACCAGTAGCAGTAACAAAT+TGG | - | chr5_1:37812619-37812638 | Msa0729840:intron | 35.0% | |
| AGTAGCAGTAACAAATTGGA+GGG | - | chr5_1:37812623-37812642 | Msa0729840:intron | 35.0% | |
| TTAGAGCTTCTGTTATCAAG+AGG | - | chr5_1:37812774-37812793 | Msa0729840:intron | 35.0% | |
| AAACGTGGAATATCATTCGT+GGG | - | chr5_1:37813043-37813062 | Msa0729840:intron | 35.0% | |
| TCTTGAAGTTAATGCTTTGC+AGG | - | chr5_1:37813259-37813278 | Msa0729840:intron | 35.0% | |
| CTTGAAGTTAATGCTTTGCA+GGG | - | chr5_1:37813260-37813279 | Msa0729840:intron | 35.0% | |
| TTGAAGTTAATGCTTTGCAG+GGG | - | chr5_1:37813261-37813280 | Msa0729840:intron | 35.0% | |
| TATTTGCACCATGTAACTTG+AGG | - | chr5_1:37813299-37813318 | Msa0729840:CDS | 35.0% | |
| GCAATACAAATCACAACATC+AGG | + | chr5_1:37813373-37813392 | None:intergenic | 35.0% | |
| CAAATCAACTGTAGCATCTA+TGG | - | chr5_1:37813438-37813457 | Msa0729840:intron | 35.0% | |
| GGATAAACTTAGAAAGACTG+AGG | - | chr5_1:37813513-37813532 | Msa0729840:intron | 35.0% | |
| TTCTATCATTGCAGTTAAGG+TGG | - | chr5_1:37813560-37813579 | Msa0729840:intron | 35.0% | |
| AACAGAGCAATGACATACAT+AGG | - | chr5_1:37813629-37813648 | Msa0729840:intron | 35.0% | |
| !! | TGATGCTACTGATAGTTTTG+TGG | - | chr5_1:37813678-37813697 | Msa0729840:intron | 35.0% |
| TCACGATGACTATAAATACC+AGG | - | chr5_1:37813723-37813742 | Msa0729840:intron | 35.0% | |
| CACGATGACTATAAATACCA+GGG | - | chr5_1:37813724-37813743 | Msa0729840:intron | 35.0% | |
| TCATCTACACATAACCATGT+TGG | + | chr5_1:37813791-37813810 | None:intergenic | 35.0% | |
| !!! | TAGAATGGTGTCCACTTTTT+AGG | - | chr5_1:37813834-37813853 | Msa0729840:intron | 35.0% |
| AACTGTGTTCTTCCTAACTT+AGG | - | chr5_1:37813957-37813976 | Msa0729840:intron | 35.0% | |
| AAAAGACTAGCACCTAAGTT+AGG | + | chr5_1:37813972-37813991 | None:intergenic | 35.0% | |
| CTAGGGCTTCAAATAAAATG+AGG | + | chr5_1:37814040-37814059 | None:intergenic | 35.0% | |
| !! | CTCATTTTATTTGAAGCCCT+AGG | - | chr5_1:37814038-37814057 | Msa0729840:intron | 35.0% |
| CTTAGTGGAATAACCAACAT+TGG | - | chr5_1:37814104-37814123 | Msa0729840:CDS | 35.0% | |
| AAGAAAACAAGGCACAAGAA+AGG | + | chr5_1:37814210-37814229 | None:intergenic | 35.0% | |
| AACTGGGGATAATGTAAAGA+AGG | + | chr5_1:37814275-37814294 | None:intergenic | 35.0% | |
| ! | ACTATAGTTGTATAATGGGG+TGG | - | chr5_1:37814383-37814402 | Msa0729840:exon | 35.0% |
| GGTTTCGAGATCTGAGAATA+AGG | + | chr5_1:37810167-37810186 | None:intergenic | 40.0% | |
| !! | GGGATTTATAGAGAGTGTCT+AGG | + | chr5_1:37810189-37810208 | None:intergenic | 40.0% |
| AATTTCAGAAGAGAGAGGGA+GGG | + | chr5_1:37810221-37810240 | None:intergenic | 40.0% | |
| GATGGATAAAGGTAGAAGAG+AGG | - | chr5_1:37810353-37810372 | Msa0729840:three_prime_UTR | 40.0% | |
| CGCGTACACAAGTTGTTAAT+TGG | - | chr5_1:37810508-37810527 | Msa0729840:three_prime_UTR | 40.0% | |
| ! | CTTCTTTTCCTACATGTCCA+TGG | + | chr5_1:37811512-37811531 | None:intergenic | 40.0% |
| GAAACCACTATCAGGCATTT+CGG | - | chr5_1:37811531-37811550 | Msa0729840:CDS | 40.0% | |
| TATCAGGCATTTCGGAAGAA+TGG | - | chr5_1:37811539-37811558 | Msa0729840:CDS | 40.0% | |
| ! | CACTGGCAAAGCATCATAAT+TGG | + | chr5_1:37811612-37811631 | None:intergenic | 40.0% |
| AATCAATTTGCGAAAGCAGC+AGG | + | chr5_1:37812013-37812032 | None:intergenic | 40.0% | |
| TACTTGGAAGACATGTACGA+GGG | - | chr5_1:37812089-37812108 | Msa0729840:CDS | 40.0% | |
| TACAACCATCTTGTTGCCTT+TGG | + | chr5_1:37812117-37812136 | None:intergenic | 40.0% | |
| CTGGTTTCACAGAATTGATG+AGG | - | chr5_1:37812142-37812161 | Msa0729840:CDS | 40.0% | |
| CCTCTCTTTCACTAAAACTG+TGG | + | chr5_1:37812184-37812203 | None:intergenic | 40.0% | |
| !! | CCACAGTTTTAGTGAAAGAG+AGG | - | chr5_1:37812181-37812200 | Msa0729840:CDS | 40.0% |
| AACTTCATGCTGCACACAAA+TGG | + | chr5_1:37812326-37812345 | None:intergenic | 40.0% | |
| TTTGTGTGCAGCATGAAGTT+TGG | - | chr5_1:37812326-37812345 | Msa0729840:CDS | 40.0% | |
| GTTTGGTAAGGATGATGTCA+AGG | - | chr5_1:37812343-37812362 | Msa0729840:CDS | 40.0% | |
| TCAAACTCTAGTGGTAGTTC+AGG | - | chr5_1:37812437-37812456 | Msa0729840:CDS | 40.0% | |
| CAAACTCTAGTGGTAGTTCA+GGG | - | chr5_1:37812438-37812457 | Msa0729840:CDS | 40.0% | |
| AGTTCAGGGAAATCTGATGA+TGG | - | chr5_1:37812452-37812471 | Msa0729840:CDS | 40.0% | |
| TTATCGCAGAAGAAGAATGG+AGG | + | chr5_1:37812496-37812515 | None:intergenic | 40.0% | |
| GTCTTATCGCAGAAGAAGAA+TGG | + | chr5_1:37812499-37812518 | None:intergenic | 40.0% | |
| GTATACCGTTGCTTCTTCTT+TGG | + | chr5_1:37812521-37812540 | None:intergenic | 40.0% | |
| GAAGAAGCAACGGTATACAA+AGG | - | chr5_1:37812523-37812542 | Msa0729840:CDS | 40.0% | |
| CAACGGTATACAAAGGTTGA+TGG | - | chr5_1:37812530-37812549 | Msa0729840:CDS | 40.0% | |
| GGAAAAGATGCTGTTGAGTT+TGG | - | chr5_1:37812551-37812570 | Msa0729840:CDS | 40.0% | |
| !! | CTCCAATTTGTTACTGCTAC+TGG | + | chr5_1:37812624-37812643 | None:intergenic | 40.0% |
| CAGTAGCAGTAACAAATTGG+AGG | - | chr5_1:37812622-37812641 | Msa0729840:intron | 40.0% | |
| GCTTCACAGTATTTAGCTGT+AGG | - | chr5_1:37812701-37812720 | Msa0729840:intron | 40.0% | |
| TTGAGAAAGGACCTCAACAT+TGG | + | chr5_1:37812729-37812748 | None:intergenic | 40.0% | |
| TAATCCCACTGTCTTGAGAA+AGG | + | chr5_1:37812742-37812761 | None:intergenic | 40.0% | |
| !!! | GATTTTAGCTTCTAGACCTG+TGG | - | chr5_1:37812961-37812980 | Msa0729840:intron | 40.0% |
| ATTCCACGTTTCTCTGATAG+TGG | + | chr5_1:37813034-37813053 | None:intergenic | 40.0% | |
| GAAACGTGGAATATCATTCG+TGG | - | chr5_1:37813042-37813061 | Msa0729840:intron | 40.0% | |
| ATATCATTCGTGGGTGATGT+TGG | - | chr5_1:37813052-37813071 | Msa0729840:intron | 40.0% | |
| TTGGTTACATTGTTGATGCC+TGG | - | chr5_1:37813071-37813090 | Msa0729840:CDS | 40.0% | |
| AAGAACAGAAGGTCATACCT+GGG | + | chr5_1:37813165-37813184 | None:intergenic | 40.0% | |
| TAAGAACAGAAGGTCATACC+TGG | + | chr5_1:37813166-37813185 | None:intergenic | 40.0% | |
| ACAAAGTTCCTGCAAATCTG+AGG | - | chr5_1:37813411-37813430 | Msa0729840:intron | 40.0% | |
| TGGGAGATGGAATACAATCT+AGG | - | chr5_1:37813458-37813477 | Msa0729840:intron | 40.0% | |
| AGATGGAATACAATCTAGGC+AGG | - | chr5_1:37813462-37813481 | Msa0729840:intron | 40.0% | |
| ! | TTACTCGGGTTCTTCTGAAA+AGG | - | chr5_1:37813492-37813511 | Msa0729840:intron | 40.0% |
| AGAACATCCTTCACAAGATC+TGG | + | chr5_1:37813544-37813563 | None:intergenic | 40.0% | |
| TGATCAACCTTCAATGAAGC+TGG | + | chr5_1:37813706-37813725 | None:intergenic | 40.0% | |
| ATGTGTAGATGACTCCATGT+TGG | - | chr5_1:37813799-37813818 | Msa0729840:intron | 40.0% | |
| !! | GTTTTAGTATTCCGTGGCAT+CGG | - | chr5_1:37814012-37814031 | Msa0729840:intron | 40.0% |
| ! | GATGATGCCTGCATAAGTTT+TGG | - | chr5_1:37814068-37814087 | Msa0729840:intron | 40.0% |
| CCTAAAGTCAAAGCCAATGT+TGG | + | chr5_1:37814120-37814139 | None:intergenic | 40.0% | |
| !! | CCAACATTGGCTTTGACTTT+AGG | - | chr5_1:37814117-37814136 | Msa0729840:CDS | 40.0% |
| !! | CATTGGCTTTGACTTTAGGA+TGG | - | chr5_1:37814121-37814140 | Msa0729840:CDS | 40.0% |
| GCCAAAGTTACACAATGCAT+GGG | + | chr5_1:37814167-37814186 | None:intergenic | 40.0% | |
| TCGAGATCTGAGAATAAGGG+AGG | + | chr5_1:37810163-37810182 | None:intergenic | 45.0% | |
| ATTTCAGAAGAGAGAGGGAG+GGG | + | chr5_1:37810220-37810239 | None:intergenic | 45.0% | |
| GAATTTCAGAAGAGAGAGGG+AGG | + | chr5_1:37810222-37810241 | None:intergenic | 45.0% | |
| GGAAGAGAAATTCGTGTCGA+TGG | - | chr5_1:37810335-37810354 | Msa0729840:three_prime_UTR | 45.0% | |
| TTCTTCCAGGGATGCGAATA+TGG | - | chr5_1:37811278-37811297 | Msa0729840:CDS | 45.0% | |
| TCACATGGTTAGGGTTACCA+TGG | - | chr5_1:37811492-37811511 | Msa0729840:CDS | 45.0% | |
| TAGGGTTACCATGGACATGT+AGG | - | chr5_1:37811501-37811520 | Msa0729840:CDS | 45.0% | |
| TCTTCCGAAATGCCTGATAG+TGG | + | chr5_1:37811538-37811557 | None:intergenic | 45.0% | |
| CTCGTACATGTCTTCCAAGT+AGG | + | chr5_1:37812090-37812109 | None:intergenic | 45.0% | |
| CTACTTGGAAGACATGTACG+AGG | - | chr5_1:37812088-37812107 | Msa0729840:CDS | 45.0% | |
| ACAAGATGGTTGTAGTTCGC+TGG | - | chr5_1:37812123-37812142 | Msa0729840:CDS | 45.0% | |
| ATGCTGCACACAAATGGTTC+TGG | + | chr5_1:37812320-37812339 | None:intergenic | 45.0% | |
| GTGCAGCATGAAGTTTGGTA+AGG | - | chr5_1:37812331-37812350 | Msa0729840:CDS | 45.0% | |
| ACTAGAGTTTGACTCCACGT+GGG | + | chr5_1:37812429-37812448 | None:intergenic | 45.0% | |
| !! | ATCTGATGATGGACCAGAAC+TGG | - | chr5_1:37812463-37812482 | Msa0729840:CDS | 45.0% |
| ! | TGGAGGTTTTCTTCCAGTTC+TGG | + | chr5_1:37812479-37812498 | None:intergenic | 45.0% |
| ATTGGAGGGTTCCGTAAAAC+TGG | - | chr5_1:37812637-37812656 | Msa0729840:intron | 45.0% | |
| ! | GGTGGTTCCAACCAGTTTTA+CGG | + | chr5_1:37812651-37812670 | None:intergenic | 45.0% |
| TTTGATTGTGGCCAACATGG+TGG | + | chr5_1:37812669-37812688 | None:intergenic | 45.0% | |
| CTCTTTGATTGTGGCCAACA+TGG | + | chr5_1:37812672-37812691 | None:intergenic | 45.0% | |
| AGCTGTAGGTTCCAATGTTG+AGG | - | chr5_1:37812715-37812734 | Msa0729840:intron | 45.0% | |
| AGGTCCTTTCTCAAGACAGT+GGG | - | chr5_1:37812735-37812754 | Msa0729840:intron | 45.0% | |
| TCTCAAGACAGTGGGATTAG+AGG | - | chr5_1:37812743-37812762 | Msa0729840:intron | 45.0% | |
| ACAGTGGGATTAGAGGATGT+TGG | - | chr5_1:37812750-37812769 | Msa0729840:intron | 45.0% | |
| GAGGCACAAAGACAAAGTGA+AGG | - | chr5_1:37812793-37812812 | Msa0729840:intron | 45.0% | |
| GGTGCAATATCACGACATTC+AGG | - | chr5_1:37812814-37812833 | Msa0729840:intron | 45.0% | |
| GGATGAAGCTAAAAAGCTCG+AGG | - | chr5_1:37812844-37812863 | Msa0729840:intron | 45.0% | |
| TCTTGGTCCTCTCATCTACT+CGG | + | chr5_1:37813006-37813025 | None:intergenic | 45.0% | |
| !! | CACGTTTCTCTGATAGTGGT+CGG | + | chr5_1:37813030-37813049 | None:intergenic | 45.0% |
| GTTACATTGTTGATGCCTGG+TGG | - | chr5_1:37813074-37813093 | Msa0729840:CDS | 45.0% | |
| CGAGAATGCCTCAAGTTACA+TGG | + | chr5_1:37813310-37813329 | None:intergenic | 45.0% | |
| ! | ACTTGAGGCATTCTCGAGAT+TGG | - | chr5_1:37813314-37813333 | Msa0729840:CDS | 45.0% |
| AGATTGGACAGGGAATGGAT+GGG | - | chr5_1:37813330-37813349 | Msa0729840:CDS | 45.0% | |
| GAATGGATGGGTAAAGGTGA+GGG | - | chr5_1:37813342-37813361 | Msa0729840:CDS | 45.0% | |
| ! | TTTGCTGTCCTCAGATTTGC+AGG | + | chr5_1:37813422-37813441 | None:intergenic | 45.0% |
| ACTGTAGCATCTATGGGAGA+TGG | - | chr5_1:37813445-37813464 | Msa0729840:intron | 45.0% | |
| TAGGCAGGCTGATACTTACT+CGG | - | chr5_1:37813477-37813496 | Msa0729840:intron | 45.0% | |
| GGAAGTTCCAGATCTTGTGA+AGG | - | chr5_1:37813534-37813553 | Msa0729840:intron | 45.0% | |
| AGTTAAGGTGGAAGTCATCC+CGG | - | chr5_1:37813572-37813591 | Msa0729840:intron | 45.0% | |
| GCATCAGACTGCAGAAACTT+CGG | + | chr5_1:37813664-37813683 | None:intergenic | 45.0% | |
| TGTGGTTCCAGCTTCATTGA+AGG | - | chr5_1:37813696-37813715 | Msa0729840:intron | 45.0% | |
| !! | ACTGAGGTACTGAAAAGGGA+AGG | + | chr5_1:37813754-37813773 | None:intergenic | 45.0% |
| !! | CACGACTGAGGTACTGAAAA+GGG | + | chr5_1:37813758-37813777 | None:intergenic | 45.0% |
| ! | ATGTGTTTCTGCTAAGTGGG+AGG | + | chr5_1:37813873-37813892 | None:intergenic | 45.0% |
| ! | ATTTGAAGCCCTAGGAAGCA+AGG | - | chr5_1:37814046-37814065 | Msa0729840:intron | 45.0% |
| !! | ATGCCTGCATAAGTTTTGGC+AGG | - | chr5_1:37814072-37814091 | Msa0729840:intron | 45.0% |
| AGTCCTGCCAAAACTTATGC+AGG | + | chr5_1:37814078-37814097 | None:intergenic | 45.0% | |
| ! | GGCAGGACTGTTTAACTTAG+TGG | - | chr5_1:37814089-37814108 | Msa0729840:intron | 45.0% |
| ATGCATGGGCTTGCAAACAA+TGG | + | chr5_1:37814153-37814172 | None:intergenic | 45.0% | |
| GCCCATGCATTGTGTAACTT+TGG | - | chr5_1:37814163-37814182 | Msa0729840:CDS | 45.0% | |
| GGCCAAAGTTACACAATGCA+TGG | + | chr5_1:37814168-37814187 | None:intergenic | 45.0% | |
| GAGAGGGAGGGGTTTGAATT+GGG | + | chr5_1:37810209-37810228 | None:intergenic | 50.0% | |
| AGAGAGGGAGGGGTTTGAAT+TGG | + | chr5_1:37810210-37810229 | None:intergenic | 50.0% | |
| TTGTCTAGATCTCTCGCGTG+TGG | - | chr5_1:37810909-37810928 | Msa0729840:CDS | 50.0% | |
| TGTCTAGATCTCTCGCGTGT+GGG | - | chr5_1:37810910-37810929 | Msa0729840:CDS | 50.0% | |
| ! | TCTCTCGCGTGTGGGATTTT+TGG | - | chr5_1:37810918-37810937 | Msa0729840:CDS | 50.0% |
| TACAGCCATATTCGCATCCC+TGG | + | chr5_1:37811286-37811305 | None:intergenic | 50.0% | |
| AGCAGAGGAGAACAAACGTC+TGG | - | chr5_1:37812061-37812080 | Msa0729840:CDS | 50.0% | |
| CAAACGTCTGGTTGCCTACT+TGG | - | chr5_1:37812073-37812092 | Msa0729840:CDS | 50.0% | |
| GACATGTACGAGGGTTCCAA+AGG | - | chr5_1:37812098-37812117 | Msa0729840:CDS | 50.0% | |
| GGGTTCCAAAGGCAACAAGA+TGG | - | chr5_1:37812109-37812128 | Msa0729840:CDS | 50.0% | |
| !! | TCGAGCTTTGTTCCGGTACT+TGG | + | chr5_1:37812288-37812307 | None:intergenic | 50.0% |
| GAAGCAAATGTATCCCCACG+TGG | - | chr5_1:37812412-37812431 | Msa0729840:CDS | 50.0% | |
| CTAGAGTTTGACTCCACGTG+GGG | + | chr5_1:37812428-37812447 | None:intergenic | 50.0% | |
| CACTAGAGTTTGACTCCACG+TGG | + | chr5_1:37812430-37812449 | None:intergenic | 50.0% | |
| CACGTGGAGTCAAACTCTAG+TGG | - | chr5_1:37812428-37812447 | Msa0729840:CDS | 50.0% | |
| GAGGGTTCCGTAAAACTGGT+TGG | - | chr5_1:37812641-37812660 | Msa0729840:intron | 50.0% | |
| ACTGGTTGGAACCACCATGT+TGG | - | chr5_1:37812655-37812674 | Msa0729840:intron | 50.0% | |
| GAGGTCCTTTCTCAAGACAG+TGG | - | chr5_1:37812734-37812753 | Msa0729840:intron | 50.0% | |
| TCACGACATTCAGGATGCAG+AGG | - | chr5_1:37812823-37812842 | Msa0729840:intron | 50.0% | |
| ACCTGTGGTACCTGATGATC+TGG | - | chr5_1:37812976-37812995 | Msa0729840:intron | 50.0% | |
| CCTGTGGTACCTGATGATCT+GGG | - | chr5_1:37812977-37812996 | Msa0729840:intron | 50.0% | |
| !! | CTCTGATAGTGGTCGGATCT+TGG | + | chr5_1:37813023-37813042 | None:intergenic | 50.0% |
| CGACCACTATCAGAGAAACG+TGG | - | chr5_1:37813028-37813047 | Msa0729840:intron | 50.0% | |
| AGGCATTCTCGAGATTGGAC+AGG | - | chr5_1:37813319-37813338 | Msa0729840:CDS | 50.0% | |
| GGCATTCTCGAGATTGGACA+GGG | - | chr5_1:37813320-37813339 | Msa0729840:CDS | 50.0% | |
| TCTCGAGATTGGACAGGGAA+TGG | - | chr5_1:37813325-37813344 | Msa0729840:CDS | 50.0% | |
| GAGATTGGACAGGGAATGGA+TGG | - | chr5_1:37813329-37813348 | Msa0729840:CDS | 50.0% | |
| GACAGGGAATGGATGGGTAA+AGG | - | chr5_1:37813336-37813355 | Msa0729840:CDS | 50.0% | |
| GGAATGGATGGGTAAAGGTG+AGG | - | chr5_1:37813341-37813360 | Msa0729840:CDS | 50.0% | |
| GATGGGTAAAGGTGAGGGAA+AGG | - | chr5_1:37813347-37813366 | Msa0729840:CDS | 50.0% | |
| AGGCAGGCTGATACTTACTC+GGG | - | chr5_1:37813478-37813497 | Msa0729840:intron | 50.0% | |
| ! | TGCCACTTCGATTCCTCTTC+CGG | + | chr5_1:37813594-37813613 | None:intergenic | 50.0% |
| TGAAAAGGGAAGGATCTCCC+TGG | + | chr5_1:37813744-37813763 | None:intergenic | 50.0% | |
| !! | GCACGACTGAGGTACTGAAA+AGG | + | chr5_1:37813759-37813778 | None:intergenic | 50.0% |
| CGTGCCGTCTTTAACCAACA+TGG | - | chr5_1:37813774-37813793 | Msa0729840:intron | 50.0% | |
| AAAATGAGGCTCCGATGCCA+CGG | + | chr5_1:37814026-37814045 | None:intergenic | 50.0% | |
| GGCATCATCCTTGCTTCCTA+GGG | + | chr5_1:37814057-37814076 | None:intergenic | 50.0% | |
| AGGCATCATCCTTGCTTCCT+AGG | + | chr5_1:37814058-37814077 | None:intergenic | 50.0% | |
| ! | GTAGTGCTGTGGACTGAGGA+CGG | + | chr5_1:37812264-37812283 | None:intergenic | 55.0% |
| CACAGCACTACGCCAAGTAC+CGG | - | chr5_1:37812273-37812292 | Msa0729840:CDS | 55.0% | |
| !! | GAGCGTGTCGAGCTTTGTTC+CGG | + | chr5_1:37812295-37812314 | None:intergenic | 55.0% |
| CCCAGATCATCAGGTACCAC+AGG | + | chr5_1:37812980-37812999 | None:intergenic | 55.0% | |
| ACTCGGAGACCCAGATCATC+AGG | + | chr5_1:37812989-37813008 | None:intergenic | 55.0% | |
| TGGGTCTCCGAGTAGATGAG+AGG | - | chr5_1:37812996-37813015 | Msa0729840:intron | 55.0% | |
| GTTGATGCCTGGTGGCATGA+TGG | - | chr5_1:37813082-37813101 | Msa0729840:CDS | 55.0% | |
| ! | ATGCCTGGTGGCATGATGGA+TGG | - | chr5_1:37813086-37813105 | Msa0729840:CDS | 55.0% |
| !! | CTGGTGGCATGATGGATGGT+GGG | - | chr5_1:37813090-37813109 | Msa0729840:CDS | 55.0% |
| !! | TGGCATGATGGATGGTGGGA+AGG | - | chr5_1:37813094-37813113 | Msa0729840:CDS | 55.0% |
| TCCCGGAAGAGGAATCGAAG+TGG | - | chr5_1:37813589-37813608 | Msa0729840:intron | 55.0% | |
| GCCACTTCGATTCCTCTTCC+GGG | + | chr5_1:37813593-37813612 | None:intergenic | 55.0% | |
| GGTTAAAGACGGCACGACTG+AGG | + | chr5_1:37813770-37813789 | None:intergenic | 55.0% | |
| ! | TGGCGTAGTGCTGTGGACTG+AGG | + | chr5_1:37812268-37812287 | None:intergenic | 60.0% |
| CGGTACTTGGCGTAGTGCTG+TGG | + | chr5_1:37812275-37812294 | None:intergenic | 60.0% | |
| CCACCATCCATCATGCCACC+AGG | + | chr5_1:37813092-37813111 | None:intergenic | 60.0% | |
| !! | CCTGGTGGCATGATGGATGG+TGG | - | chr5_1:37813089-37813108 | Msa0729840:CDS | 60.0% |
| GGTGGAAGTCATCCCGGAAG+AGG | - | chr5_1:37813578-37813597 | Msa0729840:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 37810152 | 37814491 | 37810152 | ID=Msa0729840;Name=Msa0729840 |
| chr5_1 | mRNA | 37810152 | 37814491 | 37810152 | ID=Msa0729840-mRNA-1;Parent=Msa0729840;Name=Msa0729840-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|1|1|6|681|685 |
| chr5_1 | exon | 37810152 | 37811362 | 37810152 | ID=Msa0729840-mRNA-1:exon:11389;Parent=Msa0729840-mRNA-1 |
| chr5_1 | exon | 37811477 | 37811687 | 37811477 | ID=Msa0729840-mRNA-1:exon:11388;Parent=Msa0729840-mRNA-1 |
| chr5_1 | exon | 37811778 | 37812605 | 37811778 | ID=Msa0729840-mRNA-1:exon:11387;Parent=Msa0729840-mRNA-1 |
| chr5_1 | exon | 37813069 | 37813191 | 37813069 | ID=Msa0729840-mRNA-1:exon:11386;Parent=Msa0729840-mRNA-1 |
| chr5_1 | exon | 37813299 | 37813369 | 37813299 | ID=Msa0729840-mRNA-1:exon:11385;Parent=Msa0729840-mRNA-1 |
| chr5_1 | exon | 37814094 | 37814491 | 37814094 | ID=Msa0729840-mRNA-1:exon:11384;Parent=Msa0729840-mRNA-1 |
| chr5_1 | five_prime_UTR | 37814389 | 37814491 | 37814389 | ID=Msa0729840-mRNA-1:five_prime_utr;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37814094 | 37814388 | 37814094 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37813299 | 37813369 | 37813299 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37813069 | 37813191 | 37813069 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37811778 | 37812605 | 37811778 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37811477 | 37811687 | 37811477 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | CDS | 37810833 | 37811362 | 37810833 | ID=Msa0729840-mRNA-1:cds;Parent=Msa0729840-mRNA-1 |
| chr5_1 | three_prime_UTR | 37810152 | 37810832 | 37810152 | ID=Msa0729840-mRNA-1:three_prime_utr;Parent=Msa0729840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
