Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0733040 | XP_003615380.1 | 97.436 | 273 | 7 | 0 | 1 | 273 | 39 | 311 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0733040 | sp|Q9FGF0|PGML1_ARATH | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 9.97e-133 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0733040 | G7K608 | 97.436 | 273 | 7 | 0 | 1 | 273 | 39 | 311 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0733040 | 0.806927 | 6.485585e-50 | -8.615850e-47 |
| Msa0030310 | Msa0733040 | 0.814556 | 1.451046e-51 | -8.615850e-47 |
| Msa0053900 | Msa0733040 | 0.814124 | 1.807830e-51 | -8.615850e-47 |
| Msa0669850 | Msa0733040 | 0.806973 | 6.342297e-50 | -8.615850e-47 |
| Msa0733040 | Msa0851800 | 0.874275 | 7.667324e-68 | -8.615850e-47 |
| Msa0733040 | Msa0959010 | 0.803332 | 3.666210e-49 | -8.615850e-47 |
| Msa0148360 | Msa0733040 | 0.818050 | 2.399252e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0733040 | MtrunA17_Chr5g0428091 | 97.436 | 273 | 7 | 0 | 1 | 273 | 39 | 311 | 0.0 | 561 |
| Msa0733040 | MtrunA17_Chr3g0141101 | 74.545 | 275 | 68 | 2 | 1 | 273 | 51 | 325 | 8.67e-154 | 432 |
| Msa0733040 | MtrunA17_Chr4g0049431 | 66.545 | 275 | 90 | 2 | 1 | 273 | 1 | 275 | 1.25e-136 | 386 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0733040 | AT1G58280.1 | 65.328 | 274 | 94 | 1 | 1 | 273 | 43 | 316 | 1.27e-135 | 385 |
| Msa0733040 | AT1G58280.3 | 65.328 | 274 | 94 | 1 | 1 | 273 | 28 | 301 | 2.71e-135 | 384 |
| Msa0733040 | AT1G58280.4 | 65.328 | 274 | 94 | 1 | 1 | 273 | 27 | 300 | 5.11e-135 | 384 |
| Msa0733040 | AT5G64460.4 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.6 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.10 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.2 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.1 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.8 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT5G64460.3 | 63.370 | 273 | 99 | 1 | 1 | 272 | 1 | 273 | 1.01e-133 | 379 |
| Msa0733040 | AT1G58280.2 | 59.866 | 299 | 94 | 2 | 1 | 273 | 43 | 341 | 2.35e-129 | 370 |
| Msa0733040 | AT2G17280.1 | 63.158 | 266 | 96 | 2 | 6 | 269 | 5 | 270 | 7.87e-129 | 367 |
| Msa0733040 | AT2G17280.2 | 63.158 | 266 | 96 | 2 | 6 | 269 | 5 | 270 | 7.87e-129 | 367 |
| Msa0733040 | AT5G64460.11 | 62.393 | 234 | 87 | 1 | 40 | 272 | 1 | 234 | 2.38e-111 | 321 |
| Msa0733040 | AT5G64460.7 | 62.393 | 234 | 87 | 1 | 40 | 272 | 1 | 234 | 2.38e-111 | 321 |
| Msa0733040 | AT5G64460.9 | 62.393 | 234 | 87 | 1 | 40 | 272 | 1 | 234 | 2.38e-111 | 321 |
| Msa0733040 | AT5G64460.5 | 61.979 | 192 | 72 | 1 | 82 | 272 | 1 | 192 | 4.08e-89 | 263 |
| Msa0733040 | AT1G09935.1 | 49.593 | 246 | 103 | 2 | 6 | 250 | 3 | 228 | 4.91e-79 | 239 |
| Msa0733040 | AT1G09935.2 | 49.180 | 244 | 103 | 2 | 6 | 248 | 3 | 226 | 2.36e-78 | 237 |
| Msa0733040 | AT1G09932.3 | 43.913 | 230 | 114 | 3 | 14 | 242 | 15 | 230 | 3.22e-62 | 196 |
| Msa0733040 | AT1G09932.1 | 42.623 | 244 | 125 | 3 | 14 | 256 | 15 | 244 | 5.18e-62 | 196 |
| Msa0733040 | AT1G09932.2 | 41.772 | 237 | 123 | 3 | 21 | 256 | 15 | 237 | 7.46e-58 | 186 |
| Msa0733040 | AT1G09932.4 | 37.295 | 244 | 113 | 4 | 14 | 256 | 15 | 219 | 2.68e-44 | 150 |
Find 89 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTTCAGTCTTAATATT+TGG | 0.056819 | 5_1:+45924105 | None:intergenic |
| TCTTCTTTCTTCTCTCTTTC+AGG | 0.088309 | 5_1:+45924435 | None:intergenic |
| TTTAATACCCTTGGTGCTTT+TGG | 0.209673 | 5_1:-45924141 | Msa0733040:CDS |
| TTTCTTTCCACTTTATTATA+TGG | 0.231872 | 5_1:-45923132 | Msa0733040:three_prime_UTR |
| CCATGGTTATTGTGGATAAA+TGG | 0.257144 | 5_1:-45923587 | Msa0733040:intron |
| CAAACGGCTGTTGGAGTCTT+TGG | 0.301452 | 5_1:-45925156 | Msa0733040:CDS |
| CTCTTCTTCTCCTTCTTCTC+TGG | 0.312996 | 5_1:-45930529 | Msa0733040:intron |
| ACATTTCAGTCTTAATATTT+GGG | 0.328655 | 5_1:+45924106 | None:intergenic |
| GTATACATTTGCAGTATGAT+TGG | 0.341629 | 5_1:-45923492 | Msa0733040:intron |
| TATCCTGGCAAAATTCCTTA+TGG | 0.349742 | 5_1:-45923447 | Msa0733040:CDS |
| GAGAAGAAAGAAGAAGTTAC+TGG | 0.360840 | 5_1:-45924426 | Msa0733040:CDS |
| TCTTTGTAATTGAGTGAAAC+AGG | 0.374324 | 5_1:+45930701 | None:intergenic |
| TTGTGGTTTCCCCATTGTTA+AGG | 0.383995 | 5_1:-45926338 | Msa0733040:intron |
| GCAATAAATACCTTAACAAT+GGG | 0.391056 | 5_1:+45926328 | None:intergenic |
| GCTGCCAGCCAAGAGGAGTT+AGG | 0.404360 | 5_1:+45926829 | None:intergenic |
| AAGAAGTGGTTGATTGTTGC+AGG | 0.405094 | 5_1:+45930559 | None:intergenic |
| CTTCTACATTATGAACTCCT+TGG | 0.426179 | 5_1:+45926901 | None:intergenic |
| GAAACATTAATTCAAAGGAA+TGG | 0.427324 | 5_1:-45923392 | Msa0733040:three_prime_UTR |
| CAATGAGAGTAACAATTGTT+TGG | 0.432244 | 5_1:+45923364 | None:intergenic |
| CAAGGAGTTCATAATGTAGA+AGG | 0.435431 | 5_1:-45926900 | Msa0733040:CDS |
| ACGTAATATGTTAGATGTAA+AGG | 0.437881 | 5_1:+45931644 | None:intergenic |
| TCTCTAGTCAGTAGCATCAC+TGG | 0.439328 | 5_1:+45923413 | None:intergenic |
| GAGTACCGACACATGTTTCC+TGG | 0.441022 | 5_1:-45924643 | Msa0733040:CDS |
| AAACATTAATTCAAAGGAAT+GGG | 0.445490 | 5_1:-45923391 | Msa0733040:three_prime_UTR |
| CAAAAGCATGTGAAGGCTAT+CGG | 0.447198 | 5_1:-45926384 | Msa0733040:CDS |
| TTCTACATTATGAACTCCTT+GGG | 0.448503 | 5_1:+45926902 | None:intergenic |
| TCCTCTGATGATTGAAAATG+TGG | 0.453993 | 5_1:-45925100 | Msa0733040:CDS |
| AATAAATTGGCAACATATGT+AGG | 0.462782 | 5_1:-45923184 | Msa0733040:three_prime_UTR |
| GATGCAAACCTAACTCCTCT+TGG | 0.468148 | 5_1:-45926837 | Msa0733040:CDS |
| AAAGAAGAAGTTACTGGTAG+AGG | 0.469675 | 5_1:-45924420 | Msa0733040:CDS |
| AAACCGACGACGACACTTGG+TGG | 0.473463 | 5_1:-45924461 | Msa0733040:CDS |
| AGAGCTTTGCCGAGAGCAAA+TGG | 0.480917 | 5_1:-45925022 | Msa0733040:intron |
| AACTCCTCTTGGCTGGCAGC+AGG | 0.481325 | 5_1:-45926826 | Msa0733040:intron |
| TTGAAACCGACGACGACACT+TGG | 0.483801 | 5_1:-45924464 | Msa0733040:CDS |
| ACGGCTGTTGGAGTCTTTGG+TGG | 0.485849 | 5_1:-45925153 | Msa0733040:CDS |
| TTGATTGTTGCAGGGGAAAA+CGG | 0.487034 | 5_1:+45930568 | None:intergenic |
| TGCAATAAATACCTTAACAA+TGG | 0.492075 | 5_1:+45926327 | None:intergenic |
| GTAGCATCACTGGGAAGATC+CGG | 0.492789 | 5_1:+45923423 | None:intergenic |
| TTTGTTTCAAATGGAAGTGA+GGG | 0.496508 | 5_1:+45930628 | None:intergenic |
| AAAAGCATGTGAAGGCTATC+GGG | 0.499129 | 5_1:-45926383 | Msa0733040:CDS |
| AATTCAACTACCAATTATCC+TGG | 0.506226 | 5_1:-45923462 | Msa0733040:CDS |
| CTGGGAAGATCCGGACCATA+AGG | 0.508878 | 5_1:+45923432 | None:intergenic |
| GCTCTACTGCAACAAATGGT+GGG | 0.509726 | 5_1:+45925040 | None:intergenic |
| TTTAAAATTTCTTATACGAG+GGG | 0.509932 | 5_1:-45923217 | Msa0733040:three_prime_UTR |
| CGGCTGTTGGAGTCTTTGGT+GGG | 0.510510 | 5_1:-45925152 | Msa0733040:CDS |
| TGAGTTGCCATATAATAAAG+TGG | 0.511628 | 5_1:+45923125 | None:intergenic |
| CTCTAGTCAGTAGCATCACT+GGG | 0.516578 | 5_1:+45923414 | None:intergenic |
| AGAAGAGAAAATGAAAGAAG+TGG | 0.516832 | 5_1:+45930545 | None:intergenic |
| TGGCAAAATTCCTTATGGTC+CGG | 0.517787 | 5_1:-45923442 | Msa0733040:CDS |
| TTCTTCTCTTATCACATGGA+TGG | 0.518718 | 5_1:+45924674 | None:intergenic |
| CAAAGCTCTACTGCAACAAA+TGG | 0.525931 | 5_1:+45925036 | None:intergenic |
| AGCTCTACTGCAACAAATGG+TGG | 0.526279 | 5_1:+45925039 | None:intergenic |
| TAATTGTGAACTACGTTCCA+TGG | 0.527066 | 5_1:-45923604 | Msa0733040:CDS |
| ACTACGTTCCATGGTTATTG+TGG | 0.532011 | 5_1:-45923595 | Msa0733040:CDS |
| CTAGAGAAACATTAATTCAA+AGG | 0.541005 | 5_1:-45923397 | Msa0733040:exon |
| GACGTACGTACCAGAGAAGA+AGG | 0.542337 | 5_1:+45930519 | None:intergenic |
| CCATAGCAAAACTATTCACC+TGG | 0.545933 | 5_1:-45927529 | Msa0733040:intron |
| TTTATCATACCATTTGCTCT+CGG | 0.546796 | 5_1:+45925013 | None:intergenic |
| CAAACCTAACTCCTCTTGGC+TGG | 0.550658 | 5_1:-45926833 | Msa0733040:CDS |
| TTTCATACGTTTCTCACATG+TGG | 0.554319 | 5_1:+45930663 | None:intergenic |
| AGGACAATGCAAACGGCTGT+TGG | 0.555089 | 5_1:-45925165 | Msa0733040:CDS |
| CCATTTATCCACAATAACCA+TGG | 0.562033 | 5_1:+45923587 | None:intergenic |
| TTAAAATTTCTTATACGAGG+GGG | 0.563765 | 5_1:-45923216 | Msa0733040:three_prime_UTR |
| ATGGAAGTGAGGGATAAAAG+TGG | 0.564511 | 5_1:+45930638 | None:intergenic |
| TTGTTACTCTCATTGATAGT+CGG | 0.565709 | 5_1:-45923356 | Msa0733040:three_prime_UTR |
| GAAGTGGTTGATTGTTGCAG+GGG | 0.573206 | 5_1:+45930561 | None:intergenic |
| ATCATTTCCAAAAGCACCAA+GGG | 0.581244 | 5_1:+45924134 | None:intergenic |
| GCATTGCAGGACAATGCAAA+CGG | 0.582434 | 5_1:-45925172 | Msa0733040:intron |
| GTGCTAAGACTAGAAACTGC+AGG | 0.582789 | 5_1:+45925063 | None:intergenic |
| GGTGGGGAAGCAAACACTGA+TGG | 0.588462 | 5_1:-45925135 | Msa0733040:CDS |
| TAAAATTTCTTATACGAGGG+GGG | 0.589408 | 5_1:-45923215 | Msa0733040:three_prime_UTR |
| CTCTACTGCAACAAATGGTG+GGG | 0.589544 | 5_1:+45925041 | None:intergenic |
| ACAGTTCTTCTCTTATCACA+TGG | 0.591715 | 5_1:+45924670 | None:intergenic |
| AGAAGTGGTTGATTGTTGCA+GGG | 0.593496 | 5_1:+45930560 | None:intergenic |
| CATAAGATAAGTAAGCATCA+TGG | 0.594248 | 5_1:+45926868 | None:intergenic |
| GGCTGTTGGAGTCTTTGGTG+GGG | 0.595312 | 5_1:-45925151 | Msa0733040:CDS |
| TTTCCACCAAGTGTCGTCGT+CGG | 0.599950 | 5_1:+45924458 | None:intergenic |
| AAATCTGCAAAAGCATGTGA+AGG | 0.630010 | 5_1:-45926391 | Msa0733040:CDS |
| GAATGAGAGTCACAGAACAG+AGG | 0.632443 | 5_1:+45930597 | None:intergenic |
| GCAGTTATGGATACTGCACC+TGG | 0.638731 | 5_1:-45927573 | Msa0733040:intron |
| TCGGTCGTATGAAACAGTCA+TGG | 0.642950 | 5_1:-45923337 | Msa0733040:three_prime_UTR |
| CCTCTGATGATTGAAAATGT+GGG | 0.649662 | 5_1:-45925099 | Msa0733040:CDS |
| GTTGTGTACACGTAAAGAGA+AGG | 0.650810 | 5_1:-45924196 | Msa0733040:CDS |
| ACTACCTGCTGCCAGCCAAG+AGG | 0.650877 | 5_1:+45926822 | None:intergenic |
| AATCATTTCCAAAAGCACCA+AGG | 0.666076 | 5_1:+45924133 | None:intergenic |
| ATACAGGTTAGGCATGCCCA+AGG | 0.679711 | 5_1:-45926918 | Msa0733040:intron |
| CAATTCCAGGAAACATGTGT+CGG | 0.682161 | 5_1:+45924638 | None:intergenic |
| CAATAAATACCTTAACAATG+GGG | 0.699556 | 5_1:+45926329 | None:intergenic |
| AATGGATAGAGACTTTGACC+AGG | 0.719679 | 5_1:+45927555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATTAAACAAAAATAAA+AGG | - | chr5_1:45923651-45923670 | Msa0733040:intron | 10.0% |
| !! | GATCTATATTATAATAAAAA+TGG | + | chr5_1:45925399-45925418 | None:intergenic | 10.0% |
| !!! | TTAGTATATATGTTTTTATT+TGG | - | chr5_1:45925555-45925574 | Msa0733040:intron | 10.0% |
| !! | AAAATATAGAAAATCATAAA+TGG | + | chr5_1:45927801-45927820 | None:intergenic | 10.0% |
| !! | ATCTATTTAATGATAACTTA+AGG | - | chr5_1:45923892-45923911 | Msa0733040:intron | 15.0% |
| !! | TCTATTTAATGATAACTTAA+GGG | - | chr5_1:45923893-45923912 | Msa0733040:intron | 15.0% |
| !! | TTATGTGAGATTAATTTAAT+GGG | + | chr5_1:45923996-45924015 | None:intergenic | 15.0% |
| !! | ATTATGTGAGATTAATTTAA+TGG | + | chr5_1:45923997-45924016 | None:intergenic | 15.0% |
| !! | TATAAAATAAGAGATAGATT+TGG | + | chr5_1:45924485-45924504 | None:intergenic | 15.0% |
| !!! | CACATTATAAAATGTTTTTA+GGG | + | chr5_1:45924976-45924995 | None:intergenic | 15.0% |
| !!! | TCACATTATAAAATGTTTTT+AGG | + | chr5_1:45924977-45924996 | None:intergenic | 15.0% |
| !! | TAATCCAAAAATATCTAAAA+AGG | - | chr5_1:45925107-45925126 | Msa0733040:CDS | 15.0% |
| !! | AATCCAAAAATATCTAAAAA+GGG | - | chr5_1:45925108-45925127 | Msa0733040:CDS | 15.0% |
| !! | AGTAAAAAAATGAAAAAGAA+CGG | + | chr5_1:45925489-45925508 | None:intergenic | 15.0% |
| !! | TATAGTAAAAGATAAAGTAA+AGG | - | chr5_1:45925916-45925935 | Msa0733040:intron | 15.0% |
| !!! | GTTTTTACATATGTAAATTA+AGG | - | chr5_1:45926235-45926254 | Msa0733040:intron | 15.0% |
| !! | ATAAACATAAGAATATTTCA+AGG | + | chr5_1:45926988-45927007 | None:intergenic | 15.0% |
| !!! | ATTTTTAAAACACTTCTAAT+AGG | + | chr5_1:45927566-45927585 | None:intergenic | 15.0% |
| !! | TAGAAATATTTGAATATAAC+CGG | + | chr5_1:45928231-45928250 | None:intergenic | 15.0% |
| !! | ATTCTGATATGATTTAAATT+TGG | + | chr5_1:45928641-45928660 | None:intergenic | 15.0% |
| !!! | AATCAAATCATTTTCATATT+AGG | - | chr5_1:45929224-45929243 | Msa0733040:intron | 15.0% |
| !! | ATGTTTATTACTTTAACATT+TGG | - | chr5_1:45929516-45929535 | Msa0733040:intron | 15.0% |
| !! | TTCTCAAATTTATAAGTTAT+AGG | + | chr5_1:45929881-45929900 | None:intergenic | 15.0% |
| !!! | AAATGACATTTTGTAAAATA+GGG | + | chr5_1:45930021-45930040 | None:intergenic | 15.0% |
| !!! | CTACAAAAATATCTAAAATT+TGG | - | chr5_1:45930249-45930268 | Msa0733040:intron | 15.0% |
| !!! | TTTCTTTTAATTTTTTCTTG+TGG | + | chr5_1:45930933-45930952 | None:intergenic | 15.0% |
| !!! | TACTTTTGAATTCTAAAAAT+AGG | - | chr5_1:45930990-45931009 | Msa0733040:intron | 15.0% |
| !!! | ATTTTAAAATTTCTTATACG+AGG | - | chr5_1:45931550-45931569 | Msa0733040:intron | 15.0% |
| !!! | TTTTAAAATTTCTTATACGA+GGG | - | chr5_1:45931551-45931570 | Msa0733040:intron | 15.0% |
| !! | ATGTCGATATCAATTAAATT+AGG | - | chr5_1:45923162-45923181 | Msa0733040:three_prime_UTR | 20.0% |
| !! | TGTCGATATCAATTAAATTA+GGG | - | chr5_1:45923163-45923182 | Msa0733040:three_prime_UTR | 20.0% |
| !! | TTGAGTAAGTAATATATTCA+CGG | - | chr5_1:45923737-45923756 | Msa0733040:intron | 20.0% |
| !!! | GAAGAGTAAATTTTCAAATT+AGG | - | chr5_1:45923768-45923787 | Msa0733040:intron | 20.0% |
| !!! | TGTCATTTAAGAAAAACTTA+GGG | - | chr5_1:45923953-45923972 | Msa0733040:intron | 20.0% |
| !!! | ATTGATTTTAAAAAATGCGT+TGG | + | chr5_1:45924281-45924300 | None:intergenic | 20.0% |
| !!! | ACATTAATTTTCATAGTTCA+AGG | - | chr5_1:45924865-45924884 | Msa0733040:intron | 20.0% |
| !!! | TTTCCCTTTTTAGATATTTT+TGG | + | chr5_1:45925114-45925133 | None:intergenic | 20.0% |
| !! | ATGTAATTAAAATAACGGTT+GGG | + | chr5_1:45925188-45925207 | None:intergenic | 20.0% |
| !! | TATGTAATTAAAATAACGGT+TGG | + | chr5_1:45925189-45925208 | None:intergenic | 20.0% |
| !! | GCACTATGTAATTAAAATAA+CGG | + | chr5_1:45925193-45925212 | None:intergenic | 20.0% |
| !! | AAAACAGAACCTTAAATATT+CGG | + | chr5_1:45925430-45925449 | None:intergenic | 20.0% |
| !! | ACTATAGAAATAAGTATGTT+TGG | + | chr5_1:45925902-45925921 | None:intergenic | 20.0% |
| !!! | CAAACTTTTTTTTAACCATA+TGG | - | chr5_1:45926737-45926756 | Msa0733040:intron | 20.0% |
| !! | AATATTTCAAGGAATCTAAA+TGG | + | chr5_1:45926977-45926996 | None:intergenic | 20.0% |
| !! | GAAATATTCTTATGTTTATG+TGG | - | chr5_1:45926989-45927008 | Msa0733040:intron | 20.0% |
| !! | ATAGGATTATTCTTGAATTT+AGG | - | chr5_1:45927025-45927044 | Msa0733040:intron | 20.0% |
| !!! | TTTTTTCTTTTTCATTAGAC+TGG | - | chr5_1:45927116-45927135 | Msa0733040:intron | 20.0% |
| !!! | TTTATCATACTTTTAATGTG+TGG | - | chr5_1:45927303-45927322 | Msa0733040:intron | 20.0% |
| !! | TAGTTCATATATAAAATCAG+AGG | + | chr5_1:45927352-45927371 | None:intergenic | 20.0% |
| !! | TAATATTTGAACCGTAATAA+AGG | + | chr5_1:45927626-45927645 | None:intergenic | 20.0% |
| !! | TATTACGGTTCAAATATTAT+TGG | - | chr5_1:45927627-45927646 | Msa0733040:intron | 20.0% |
| !! | GTTATTGACAATTATTTCAT+GGG | + | chr5_1:45928129-45928148 | None:intergenic | 20.0% |
| !! | TGTTATTGACAATTATTTCA+TGG | + | chr5_1:45928130-45928149 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGTTGTAGTAAT+TGG | + | chr5_1:45928588-45928607 | None:intergenic | 20.0% |
| !!! | ATATCAGAATTTGATAATTC+AGG | - | chr5_1:45928651-45928670 | Msa0733040:intron | 20.0% |
| !!! | TTTAGAATTAACCTCATAAT+AGG | - | chr5_1:45929029-45929048 | Msa0733040:intron | 20.0% |
| !! | CAGTATATTAGAATGAAAAA+AGG | - | chr5_1:45929122-45929141 | Msa0733040:intron | 20.0% |
| !! | AAATTTATAAGTTATAGGAG+GGG | + | chr5_1:45929876-45929895 | None:intergenic | 20.0% |
| !! | CAAATTTATAAGTTATAGGA+GGG | + | chr5_1:45929877-45929896 | None:intergenic | 20.0% |
| !! | TCAAATTTATAAGTTATAGG+AGG | + | chr5_1:45929878-45929897 | None:intergenic | 20.0% |
| !!! | CAAATGACATTTTGTAAAAT+AGG | + | chr5_1:45930022-45930041 | None:intergenic | 20.0% |
| !!! | TTTAGATATTTTTGTAGCAA+TGG | + | chr5_1:45930246-45930265 | None:intergenic | 20.0% |
| !! | ACATTTCAGTCTTAATATTT+GGG | + | chr5_1:45930666-45930685 | None:intergenic | 20.0% |
| !! | TTAACCCTTATGAAAAATAT+TGG | - | chr5_1:45930809-45930828 | Msa0733040:intron | 20.0% |
| !!! | ATCTCCAATATTTTTCATAA+GGG | + | chr5_1:45930816-45930835 | None:intergenic | 20.0% |
| !!! | TGGACAAATTGATAAAATTT+TGG | - | chr5_1:45931120-45931139 | Msa0733040:intron | 20.0% |
| !! | AAACATTAATTCAAAGGAAT+GGG | - | chr5_1:45931378-45931397 | Msa0733040:intron | 20.0% |
| !!! | TTTTTCAGGAAAAATTATGT+CGG | - | chr5_1:45931519-45931538 | Msa0733040:intron | 20.0% |
| !!! | TTTAAAATTTCTTATACGAG+GGG | - | chr5_1:45931552-45931571 | Msa0733040:intron | 20.0% |
| !! | TTTCTTTCCACTTTATTATA+TGG | - | chr5_1:45931637-45931656 | Msa0733040:five_prime_UTR | 20.0% |
| ! | ACGTAATATGTTAGATGTAA+AGG | + | chr5_1:45923128-45923147 | None:intergenic | 25.0% |
| !! | TTTTCTCTAAACAAAACAGA+TGG | + | chr5_1:45923287-45923306 | None:intergenic | 25.0% |
| ! | CTTTGTAATCACCAAATATT+TGG | + | chr5_1:45923386-45923405 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCAAACGAACAAT+CGG | - | chr5_1:45923411-45923430 | Msa0733040:exon | 25.0% |
| ! | ATTATGAATCAAAGATGAGT+TGG | + | chr5_1:45923448-45923467 | None:intergenic | 25.0% |
| ! | AATACATGCATAGCTAAAAT+TGG | - | chr5_1:45923491-45923510 | Msa0733040:intron | 25.0% |
| ! | ATACATGCATAGCTAAAATT+GGG | - | chr5_1:45923492-45923511 | Msa0733040:intron | 25.0% |
| ! | TAAAATTGGGAATCAATACA+AGG | - | chr5_1:45923505-45923524 | Msa0733040:intron | 25.0% |
| ! | AAAATTGGGAATCAATACAA+GGG | - | chr5_1:45923506-45923525 | Msa0733040:intron | 25.0% |
| ! | GTTTGAAAAAAGAGGTTTAA+AGG | + | chr5_1:45923596-45923615 | None:intergenic | 25.0% |
| ! | ACAAAAATAAAAGGACAAGA+AGG | - | chr5_1:45923660-45923679 | Msa0733040:intron | 25.0% |
| ! | CAAAAATAAAAGGACAAGAA+GGG | - | chr5_1:45923661-45923680 | Msa0733040:intron | 25.0% |
| ! | ATTTAATGATAACTTAAGGG+AGG | - | chr5_1:45923896-45923915 | Msa0733040:intron | 25.0% |
| !!! | AGTGTCTATTTTAAAACTAG+AGG | - | chr5_1:45923921-45923940 | Msa0733040:intron | 25.0% |
| !!! | GTGTCTATTTTAAAACTAGA+GGG | - | chr5_1:45923922-45923941 | Msa0733040:intron | 25.0% |
| !!! | TGTCTATTTTAAAACTAGAG+GGG | - | chr5_1:45923923-45923942 | Msa0733040:intron | 25.0% |
| !!! | GTGTCATTTAAGAAAAACTT+AGG | - | chr5_1:45923952-45923971 | Msa0733040:intron | 25.0% |
| ! | GTCATTTAAGAAAAACTTAG+GGG | - | chr5_1:45923954-45923973 | Msa0733040:intron | 25.0% |
| !!! | GAAGTTAGTTTTGTTTCAAA+TGG | + | chr5_1:45924153-45924172 | None:intergenic | 25.0% |
| ! | GTAAAGAGCTTATGAAAATA+AGG | - | chr5_1:45924638-45924657 | Msa0733040:CDS | 25.0% |
| !! | TCAATTCAAATTTGAGCTTT+TGG | - | chr5_1:45924751-45924770 | Msa0733040:intron | 25.0% |
| ! | AAGTACTATTGAATTGCATA+AGG | - | chr5_1:45924916-45924935 | Msa0733040:intron | 25.0% |
| ! | GTGAAATAAGAGAATTTCTA+TGG | + | chr5_1:45925151-45925170 | None:intergenic | 25.0% |
| ! | CAAATCAATCCGAATATTTA+AGG | - | chr5_1:45925418-45925437 | Msa0733040:intron | 25.0% |
| ! | TAAGCTCTCAAAATAACTTA+TGG | + | chr5_1:45925973-45925992 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAGTTAA+TGG | - | chr5_1:45925997-45926016 | Msa0733040:intron | 25.0% |
| !! | TCAGATTAATTTTCAGTTGA+TGG | - | chr5_1:45926210-45926229 | Msa0733040:intron | 25.0% |
| ! | ACTATTGCATATATAGCATA+AGG | - | chr5_1:45926258-45926277 | Msa0733040:intron | 25.0% |
| !! | TATTTCAGTTTTTGCATAGT+TGG | - | chr5_1:45926414-45926433 | Msa0733040:intron | 25.0% |
| ! | TGTTGACATTTATTTCATCA+AGG | - | chr5_1:45926441-45926460 | Msa0733040:intron | 25.0% |
| ! | AACAGAATAAAAAAGGAATC+AGG | + | chr5_1:45926504-45926523 | None:intergenic | 25.0% |
| !! | CTTTTCAGAATCTATTCTTA+CGG | - | chr5_1:45926627-45926646 | Msa0733040:intron | 25.0% |
| ! | TTACTTTGTAACTTTGCTTT+AGG | - | chr5_1:45926697-45926716 | Msa0733040:intron | 25.0% |
| ! | TGACAAAACTATTTATCTCT+TGG | + | chr5_1:45926801-45926820 | None:intergenic | 25.0% |
| !! | TTTTAGTCAATGATCAAACT+CGG | - | chr5_1:45926828-45926847 | Msa0733040:CDS | 25.0% |
| ! | TCAGTTAAGGTCAAATTAAT+TGG | + | chr5_1:45926860-45926879 | None:intergenic | 25.0% |
| ! | TGTGGTAAAAAAATTCAGAT+AGG | - | chr5_1:45927007-45927026 | Msa0733040:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | + | chr5_1:45927509-45927528 | None:intergenic | 25.0% |
| ! | TTAAAACACTTCTAATAGGA+AGG | + | chr5_1:45927562-45927581 | None:intergenic | 25.0% |
| !! | TATTTTATGACCTTGTATAC+AGG | - | chr5_1:45927835-45927854 | Msa0733040:intron | 25.0% |
| ! | TAAGATATTGTTGTAGAGAT+TGG | - | chr5_1:45928066-45928085 | Msa0733040:intron | 25.0% |
| ! | TTTATGTTCTTTAGATGTCA+TGG | - | chr5_1:45928318-45928337 | Msa0733040:intron | 25.0% |
| !!! | CACAACTAGTTCAATTTTTT+TGG | + | chr5_1:45928416-45928435 | None:intergenic | 25.0% |
| ! | CAAAAAAATTGAACTAGTTG+TGG | - | chr5_1:45928414-45928433 | Msa0733040:intron | 25.0% |
| ! | CAATAAATACCTTAACAATG+GGG | + | chr5_1:45928443-45928462 | None:intergenic | 25.0% |
| ! | GCAATAAATACCTTAACAAT+GGG | + | chr5_1:45928444-45928463 | None:intergenic | 25.0% |
| ! | TGCAATAAATACCTTAACAA+TGG | + | chr5_1:45928445-45928464 | None:intergenic | 25.0% |
| ! | TATTATTGTGATGAGATACA+AGG | - | chr5_1:45928524-45928543 | Msa0733040:intron | 25.0% |
| ! | GATACAAGGATTGAATATAA+AGG | - | chr5_1:45928538-45928557 | Msa0733040:intron | 25.0% |
| ! | ATTGAATATAAAGGTAGAGT+TGG | - | chr5_1:45928547-45928566 | Msa0733040:intron | 25.0% |
| ! | GAAAGTTTAGAAAGTTTCTT+AGG | + | chr5_1:45928719-45928738 | None:intergenic | 25.0% |
| ! | ATTAGTGATTATGACTTAAG+TGG | - | chr5_1:45929163-45929182 | Msa0733040:intron | 25.0% |
| ! | TGACTTAAGTGGTTATATAT+AGG | - | chr5_1:45929174-45929193 | Msa0733040:intron | 25.0% |
| ! | AATAAGCTGAAAATAACTTG+CGG | - | chr5_1:45929287-45929306 | Msa0733040:intron | 25.0% |
| ! | GTATTAGTATGATATTGAGA+TGG | - | chr5_1:45929423-45929442 | Msa0733040:intron | 25.0% |
| ! | AAATGATTCTTACCACTAAA+AGG | + | chr5_1:45929456-45929475 | None:intergenic | 25.0% |
| ! | ATAACTAATACTCCTCAATA+TGG | + | chr5_1:45929484-45929503 | None:intergenic | 25.0% |
| !!! | AATAAAAGTGCTTCTGTATT+TGG | - | chr5_1:45929545-45929564 | Msa0733040:intron | 25.0% |
| !!! | ATAAAAGTGCTTCTGTATTT+GGG | - | chr5_1:45929546-45929565 | Msa0733040:intron | 25.0% |
| !! | TGAATCAACTAGTTTACATT+TGG | - | chr5_1:45929794-45929813 | Msa0733040:intron | 25.0% |
| ! | GAGAAAACAAATTGATTGAA+TGG | - | chr5_1:45929896-45929915 | Msa0733040:intron | 25.0% |
| ! | AATCAGAATACTTATGTACA+AGG | - | chr5_1:45930049-45930068 | Msa0733040:intron | 25.0% |
| ! | CACTATAATTCTCTTAAGTT+AGG | - | chr5_1:45930421-45930440 | Msa0733040:intron | 25.0% |
| !! | CTCAAATTTGTTTATTCGTT+TGG | - | chr5_1:45930545-45930564 | Msa0733040:five_prime_UTR | 25.0% |
| ! | CACATTTCAGTCTTAATATT+TGG | + | chr5_1:45930667-45930686 | None:intergenic | 25.0% |
| !!! | TATTCTAGCATTGATATATG+TGG | - | chr5_1:45930740-45930759 | Msa0733040:five_prime_UTR | 25.0% |
| !!! | ATTCTAGCATTGATATATGT+GGG | - | chr5_1:45930741-45930760 | Msa0733040:five_prime_UTR | 25.0% |
| !! | CATCTCCAATATTTTTCATA+AGG | + | chr5_1:45930817-45930836 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | - | chr5_1:45930885-45930904 | Msa0733040:intron | 25.0% |
| ! | CATAATATATGTAAGGTCTA+GGG | - | chr5_1:45930892-45930911 | Msa0733040:intron | 25.0% |
| !!! | CTTTTAATTTTTTCTTGTGG+TGG | + | chr5_1:45930930-45930949 | None:intergenic | 25.0% |
| ! | ATAGGAAAATTCTTACTCAA+CGG | - | chr5_1:45931008-45931027 | Msa0733040:intron | 25.0% |
| !! | ATGAAAGTGTAACATATGTA+GGG | + | chr5_1:45931100-45931119 | None:intergenic | 25.0% |
| !! | AATGAAAGTGTAACATATGT+AGG | + | chr5_1:45931101-45931120 | None:intergenic | 25.0% |
| ! | TACATATGTTACACTTTCAT+TGG | - | chr5_1:45931100-45931119 | Msa0733040:intron | 25.0% |
| ! | CTAGAGAAACATTAATTCAA+AGG | - | chr5_1:45931372-45931391 | Msa0733040:intron | 25.0% |
| ! | GAAACATTAATTCAAAGGAA+TGG | - | chr5_1:45931377-45931396 | Msa0733040:intron | 25.0% |
| ! | TTAAAATTTCTTATACGAGG+GGG | - | chr5_1:45931553-45931572 | Msa0733040:intron | 25.0% |
| ! | AATAAATTGGCAACATATGT+AGG | - | chr5_1:45931585-45931604 | Msa0733040:intron | 25.0% |
| !!! | CAAATTTTGAGATGAAAAGA+TGG | - | chr5_1:45931611-45931630 | Msa0733040:intron | 25.0% |
| ! | TGTCATTTAACCAAACATCA+GGG | + | chr5_1:45923206-45923225 | None:intergenic | 30.0% |
| GTTAACAGAGTTAAATTGAG+GGG | + | chr5_1:45923265-45923284 | None:intergenic | 30.0% | |
| GGTTAACAGAGTTAAATTGA+GGG | + | chr5_1:45923266-45923285 | None:intergenic | 30.0% | |
| TGGTTAACAGAGTTAAATTG+AGG | + | chr5_1:45923267-45923286 | None:intergenic | 30.0% | |
| !!! | ATGTATTAGTTTTCTACGAG+TGG | + | chr5_1:45923478-45923497 | None:intergenic | 30.0% |
| ! | TGTTTTACAAATCCCTAACT+TGG | + | chr5_1:45923636-45923655 | None:intergenic | 30.0% |
| TAATATATTCACGGTTCAGT+AGG | - | chr5_1:45923746-45923765 | Msa0733040:intron | 30.0% | |
| TCTCTTGTAAATGAAGATGA+TGG | - | chr5_1:45923795-45923814 | Msa0733040:intron | 30.0% | |
| ATAACAGCAGTTACAAGATA+AGG | - | chr5_1:45923860-45923879 | Msa0733040:intron | 30.0% | |
| TAACAGCAGTTACAAGATAA+GGG | - | chr5_1:45923861-45923880 | Msa0733040:intron | 30.0% | |
| ATTTAAGAAAAACTTAGGGG+AGG | - | chr5_1:45923957-45923976 | Msa0733040:intron | 30.0% | |
| ATGACAAAAATATCCCAAAG+CGG | - | chr5_1:45924015-45924034 | Msa0733040:intron | 30.0% | |
| ! | TGAAACAGGAGAACTTTTAT+AGG | + | chr5_1:45924057-45924076 | None:intergenic | 30.0% |
| TCTTTGTAATTGAGTGAAAC+AGG | + | chr5_1:45924071-45924090 | None:intergenic | 30.0% | |
| TTTGTTTCAAATGGAAGTGA+GGG | + | chr5_1:45924144-45924163 | None:intergenic | 30.0% | |
| !! | TTTTGTTTCAAATGGAAGTG+AGG | + | chr5_1:45924145-45924164 | None:intergenic | 30.0% |
| AGAAGAGAAAATGAAAGAAG+TGG | + | chr5_1:45924227-45924246 | None:intergenic | 30.0% | |
| ! | GTTGTGTATCATAACTGTTT+TGG | - | chr5_1:45924672-45924691 | Msa0733040:CDS | 30.0% |
| ! | TTTTCATAGTTCAAGGTTGA+TGG | - | chr5_1:45924872-45924891 | Msa0733040:intron | 30.0% |
| AAGAAATACTAACATGTGCA+CGG | - | chr5_1:45924941-45924960 | Msa0733040:intron | 30.0% | |
| ATACTTGAACAACATGCAAA+CGG | + | chr5_1:45925059-45925078 | None:intergenic | 30.0% | |
| AAAAAGGGAAAAGTCAAACA+CGG | - | chr5_1:45925123-45925142 | Msa0733040:CDS | 30.0% | |
| TAATTAAAATAACGGTTGGG+CGG | + | chr5_1:45925185-45925204 | None:intergenic | 30.0% | |
| ! | GATAAATCTGGAATTTCACT+TGG | + | chr5_1:45925230-45925249 | None:intergenic | 30.0% |
| !! | GAAAGCTAGTTTGTTTCAAA+TGG | + | chr5_1:45925273-45925292 | None:intergenic | 30.0% |
| AAAGAAGATTGATTGTTGCA+GGG | + | chr5_1:45925338-45925357 | None:intergenic | 30.0% | |
| AAAAGAAGATTGATTGTTGC+AGG | + | chr5_1:45925339-45925358 | None:intergenic | 30.0% | |
| ! | CAACAATCAATCTTCTTTTC+TGG | - | chr5_1:45925340-45925359 | Msa0733040:intron | 30.0% |
| ATATAAACTCTGTGATTGCT+TGG | - | chr5_1:45925636-45925655 | Msa0733040:intron | 30.0% | |
| ! | TAAGCAATTGTGAGAGTTTT+TGG | - | chr5_1:45925688-45925707 | Msa0733040:intron | 30.0% |
| ! | AAGCAATTGTGAGAGTTTTT+GGG | - | chr5_1:45925689-45925708 | Msa0733040:intron | 30.0% |
| ! | TCAATCCAAATTAGAGCTTT+TGG | - | chr5_1:45926101-45926120 | Msa0733040:intron | 30.0% |
| ! | CTATTCCAAAAGCTCTAATT+TGG | + | chr5_1:45926109-45926128 | None:intergenic | 30.0% |
| CAGATCAATTCTAACTTTCT+CGG | - | chr5_1:45926173-45926192 | Msa0733040:intron | 30.0% | |
| !!! | GATTAATTTTCAGTTGATGG+TGG | - | chr5_1:45926213-45926232 | Msa0733040:intron | 30.0% |
| CACAGAGAACAGAATAAAAA+AGG | + | chr5_1:45926511-45926530 | None:intergenic | 30.0% | |
| TGCTTGTAAATTGCAATTCT+TGG | - | chr5_1:45926674-45926693 | Msa0733040:intron | 30.0% | |
| ! | TTTTTAACCATATGGTTCAC+AGG | - | chr5_1:45926745-45926764 | Msa0733040:intron | 30.0% |
| ! | TTTTAACCATATGGTTCACA+GGG | - | chr5_1:45926746-45926765 | Msa0733040:intron | 30.0% |
| ! | AACCCTAGTAATCTGAAATT+CGG | - | chr5_1:45926775-45926794 | Msa0733040:intron | 30.0% |
| TGGTTAATGAACTTCAGTTA+AGG | + | chr5_1:45926873-45926892 | None:intergenic | 30.0% | |
| ATATAAATTTGCCACAAACC+AGG | + | chr5_1:45927261-45927280 | None:intergenic | 30.0% | |
| ! | AAATGACTTGGAGAAAAACA+TGG | + | chr5_1:45927529-45927548 | None:intergenic | 30.0% |
| CTTCCTTAAAGCTCTTAAAT+CGG | + | chr5_1:45927674-45927693 | None:intergenic | 30.0% | |
| GTGTTGAAGTAGTTATATTC+TGG | - | chr5_1:45927766-45927785 | Msa0733040:intron | 30.0% | |
| TTCTACATTATGAACTCCTT+GGG | + | chr5_1:45927870-45927889 | None:intergenic | 30.0% | |
| CATAAGATAAGTAAGCATCA+TGG | + | chr5_1:45927904-45927923 | None:intergenic | 30.0% | |
| AACATGACATTCGAAAGAAT+TGG | + | chr5_1:45927980-45927999 | None:intergenic | 30.0% | |
| ! | TGTTGTCAAGTATTTCTGTA+TGG | - | chr5_1:45927996-45928015 | Msa0733040:intron | 30.0% |
| ACAATTATTTCATGGGAAAC+CGG | + | chr5_1:45928122-45928141 | None:intergenic | 30.0% | |
| AGTGAGACATATACATGATT+TGG | + | chr5_1:45928482-45928501 | None:intergenic | 30.0% | |
| AGTTTAATCTTCCCTTCAAA+GGG | + | chr5_1:45928798-45928817 | None:intergenic | 30.0% | |
| !! | TTAATTCTAAAGTCAGCATC+GGG | + | chr5_1:45929020-45929039 | None:intergenic | 30.0% |
| !! | GTTAATTCTAAAGTCAGCAT+CGG | + | chr5_1:45929021-45929040 | None:intergenic | 30.0% |
| !! | TACTACAACTTAGCTCTTTT+GGG | + | chr5_1:45929055-45929074 | None:intergenic | 30.0% |
| !! | ATACTACAACTTAGCTCTTT+TGG | + | chr5_1:45929056-45929075 | None:intergenic | 30.0% |
| TAGTATGTAGAGATACTCTA+TGG | - | chr5_1:45929070-45929089 | Msa0733040:intron | 30.0% | |
| !! | CTTATTTCTACAAGTTCTCT+AGG | + | chr5_1:45929273-45929292 | None:intergenic | 30.0% |
| ! | ATCAACTGTATGACTAGTTA+GGG | + | chr5_1:45929340-45929359 | None:intergenic | 30.0% |
| ! | AATCAACTGTATGACTAGTT+AGG | + | chr5_1:45929341-45929360 | None:intergenic | 30.0% |
| ! | AGTTGATTCTAAAAACCAAC+TGG | - | chr5_1:45929353-45929372 | Msa0733040:intron | 30.0% |
| !! | TAAAAGTGCTTCTGTATTTG+GGG | - | chr5_1:45929547-45929566 | Msa0733040:intron | 30.0% |
| AATTCAAACTATTGCATTGC+AGG | - | chr5_1:45929584-45929603 | Msa0733040:intron | 30.0% | |
| TTTATCATACCATTTGCTCT+CGG | + | chr5_1:45929759-45929778 | None:intergenic | 30.0% | |
| TTGAAGATGTACTAGTAGAT+AGG | + | chr5_1:45929833-45929852 | None:intergenic | 30.0% | |
| TTTGTAAAATAGGGAGGTAA+AGG | + | chr5_1:45930012-45930031 | None:intergenic | 30.0% | |
| ! | TGACATTTTGTAAAATAGGG+AGG | + | chr5_1:45930018-45930037 | None:intergenic | 30.0% |
| !! | TCCTGGAATTGATTTTTCAT+TGG | - | chr5_1:45930143-45930162 | Msa0733040:intron | 30.0% |
| ACCAATGAAAAATCAATTCC+AGG | + | chr5_1:45930147-45930166 | None:intergenic | 30.0% | |
| TTCTTTCATACCTCATGATA+TGG | - | chr5_1:45930181-45930200 | Msa0733040:intron | 30.0% | |
| ! | TTTGTTTATTCGTTTGGTTC+AGG | - | chr5_1:45930551-45930570 | Msa0733040:five_prime_UTR | 30.0% |
| ! | AGTTTTCTGTTTAATACCCT+TGG | - | chr5_1:45930619-45930638 | Msa0733040:five_prime_UTR | 30.0% |
| ACAAGATTTGTCAAACTTTC+AGG | + | chr5_1:45930708-45930727 | None:intergenic | 30.0% | |
| TGTGGGAATGATAAATAACA+AGG | - | chr5_1:45930758-45930777 | Msa0733040:five_prime_UTR | 30.0% | |
| GCATAATATATGTAAGGTCT+AGG | - | chr5_1:45930891-45930910 | Msa0733040:intron | 30.0% | |
| !!! | TAATTTTTTCTTGTGGTGGA+CGG | + | chr5_1:45930926-45930945 | None:intergenic | 30.0% |
| TAGATCAAACAAAGAAGTCA+AGG | + | chr5_1:45930972-45930991 | None:intergenic | 30.0% | |
| GTATACATTTGCAGTATGAT+TGG | - | chr5_1:45931277-45931296 | Msa0733040:intron | 30.0% | |
| AATTCAACTACCAATTATCC+TGG | - | chr5_1:45931307-45931326 | Msa0733040:intron | 30.0% | |
| CAATGAGAGTAACAATTGTT+TGG | + | chr5_1:45931408-45931427 | None:intergenic | 30.0% | |
| ! | TTGTTACTCTCATTGATAGT+CGG | - | chr5_1:45931413-45931432 | Msa0733040:intron | 30.0% |
| TAAAATTTCTTATACGAGGG+GGG | - | chr5_1:45931554-45931573 | Msa0733040:intron | 30.0% | |
| ! | GGGGGTATAAGAAAATAAAT+TGG | - | chr5_1:45931572-45931591 | Msa0733040:intron | 30.0% |
| TGAGTTGCCATATAATAAAG+TGG | + | chr5_1:45931647-45931666 | None:intergenic | 30.0% | |
| GTCATTTAACCAAACATCAG+GGG | + | chr5_1:45923205-45923224 | None:intergenic | 35.0% | |
| !! | GTGTCATTTAACCAAACATC+AGG | + | chr5_1:45923207-45923226 | None:intergenic | 35.0% |
| !!! | CTGCATTTTTGAAACTAGAG+GGG | + | chr5_1:45923236-45923255 | None:intergenic | 35.0% |
| !!! | GCTGCATTTTTGAAACTAGA+GGG | + | chr5_1:45923237-45923256 | None:intergenic | 35.0% |
| !!! | TGCTGCATTTTTGAAACTAG+AGG | + | chr5_1:45923238-45923257 | None:intergenic | 35.0% |
| TGCATGAGTGACCAAATATT+TGG | - | chr5_1:45923372-45923391 | Msa0733040:three_prime_UTR | 35.0% | |
| TCTGGTGTGTTTGAAAAAAG+AGG | + | chr5_1:45923604-45923623 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTCAAACACACCAG+AGG | - | chr5_1:45923603-45923622 | Msa0733040:CDS | 35.0% |
| TACAAATCCCTAACTTGGTT+GGG | + | chr5_1:45923631-45923650 | None:intergenic | 35.0% | |
| TTACAAATCCCTAACTTGGT+TGG | + | chr5_1:45923632-45923651 | None:intergenic | 35.0% | |
| TCTTTCTGTTAACACAGAGA+TGG | + | chr5_1:45923841-45923860 | None:intergenic | 35.0% | |
| ! | GTATTTGTCTTTTCCGCTTT+GGG | + | chr5_1:45924031-45924050 | None:intergenic | 35.0% |
| ! | ACAGGAGAACTTTTATAGGT+CGG | + | chr5_1:45924053-45924072 | None:intergenic | 35.0% |
| TTTCATACGTTTCTCACATG+TGG | + | chr5_1:45924109-45924128 | None:intergenic | 35.0% | |
| TACATAGAAGAAGCGAAAAG+TGG | + | chr5_1:45924364-45924383 | None:intergenic | 35.0% | |
| AAGCGCTTACAAGATTCTTT+GGG | + | chr5_1:45924706-45924725 | None:intergenic | 35.0% | |
| TAAGCGCTTACAAGATTCTT+TGG | + | chr5_1:45924707-45924726 | None:intergenic | 35.0% | |
| ! | ACATCACAGATACTAGTTTC+AGG | - | chr5_1:45924794-45924813 | Msa0733040:intron | 35.0% |
| AAGAAGATTGATTGTTGCAG+GGG | + | chr5_1:45925337-45925356 | None:intergenic | 35.0% | |
| !! | AGAGTTTTTGGGAGACTTTA+TGG | - | chr5_1:45925700-45925719 | Msa0733040:intron | 35.0% |
| !! | GCTATTTTCAGCTTATTTGC+AGG | - | chr5_1:45925739-45925758 | Msa0733040:intron | 35.0% |
| GTATATGCTTCAGGACAAAT+AGG | - | chr5_1:45926554-45926573 | Msa0733040:intron | 35.0% | |
| TGAAAAGCAAGACCATACAA+AGG | + | chr5_1:45926614-45926633 | None:intergenic | 35.0% | |
| ACCACTTAAATTCAACCACT+TGG | - | chr5_1:45926889-45926908 | Msa0733040:CDS | 35.0% | |
| CATGAAGAAGTTTGAACAAC+AGG | + | chr5_1:45926915-45926934 | None:intergenic | 35.0% | |
| AAACTTCTTCATGCTTGCTT+TGG | - | chr5_1:45926922-45926941 | Msa0733040:intron | 35.0% | |
| ACTATTCTTGTGTTGCACAA+TGG | - | chr5_1:45927085-45927104 | Msa0733040:intron | 35.0% | |
| TTTGTGTGTAACTGCAGTTA+TGG | - | chr5_1:45927183-45927202 | Msa0733040:intron | 35.0% | |
| !! | ATAGTTTTGCTATGGTGCAA+TGG | + | chr5_1:45927235-45927254 | None:intergenic | 35.0% |
| ! | AAAACTATTCACCTGGTTTG+TGG | - | chr5_1:45927247-45927266 | Msa0733040:intron | 35.0% |
| TCTTTCGCGAAATAATTCCA+GGG | - | chr5_1:45927388-45927407 | Msa0733040:intron | 35.0% | |
| TGAAAAGAATTCTAAGTCCC+TGG | + | chr5_1:45927408-45927427 | None:intergenic | 35.0% | |
| GGATCTAGAGATAAATGACT+TGG | + | chr5_1:45927541-45927560 | None:intergenic | 35.0% | |
| ATTTGAACCGTAATAAAGGC+CGG | + | chr5_1:45927622-45927641 | None:intergenic | 35.0% | |
| GTTCCGATTTAAGAGCTTTA+AGG | - | chr5_1:45927668-45927687 | Msa0733040:intron | 35.0% | |
| AAATCAGACATTGAACTTGC+GGG | + | chr5_1:45927717-45927736 | None:intergenic | 35.0% | |
| CAAATCAGACATTGAACTTG+CGG | + | chr5_1:45927718-45927737 | None:intergenic | 35.0% | |
| TATGACCTTGTATACAGGTT+AGG | - | chr5_1:45927840-45927859 | Msa0733040:intron | 35.0% | |
| CTTCTACATTATGAACTCCT+TGG | + | chr5_1:45927871-45927890 | None:intergenic | 35.0% | |
| CAAGGAGTTCATAATGTAGA+AGG | - | chr5_1:45927869-45927888 | Msa0733040:intron | 35.0% | |
| ! | TGTATGGTTTTTGTATCGTG+TGG | - | chr5_1:45928012-45928031 | Msa0733040:intron | 35.0% |
| TCATTGTGATCATTTCAGAG+AGG | + | chr5_1:45928042-45928061 | None:intergenic | 35.0% | |
| !! | GTAGCACTGACATTTCATAT+TGG | - | chr5_1:45928197-45928216 | Msa0733040:intron | 35.0% |
| !! | ATACTTTGAGGCTCTATAAC+AGG | - | chr5_1:45928351-45928370 | Msa0733040:intron | 35.0% |
| ! | AAATCTGCAAAAGCATGTGA+AGG | - | chr5_1:45928378-45928397 | Msa0733040:intron | 35.0% |
| TAGTGAACATTTCCCTTTGA+AGG | - | chr5_1:45928783-45928802 | Msa0733040:intron | 35.0% | |
| AGTGAACATTTCCCTTTGAA+GGG | - | chr5_1:45928784-45928803 | Msa0733040:intron | 35.0% | |
| GAGTTTAATCTTCCCTTCAA+AGG | + | chr5_1:45928799-45928818 | None:intergenic | 35.0% | |
| ATATTAGACGATAGAGTGTG+AGG | + | chr5_1:45928872-45928891 | None:intergenic | 35.0% | |
| TGACTTCAAGAATAGAACTC+AGG | + | chr5_1:45928955-45928974 | None:intergenic | 35.0% | |
| TAGAATGAAAAAAGGTCGTG+TGG | - | chr5_1:45929130-45929149 | Msa0733040:intron | 35.0% | |
| !! | TACTCGATGTTATTTCCAGT+TGG | + | chr5_1:45929371-45929390 | None:intergenic | 35.0% |
| TAACCCACGTATTATACACA+CGG | + | chr5_1:45929399-45929418 | None:intergenic | 35.0% | |
| ! | GATGGAATTTGACCTTTTAG+TGG | - | chr5_1:45929441-45929460 | Msa0733040:intron | 35.0% |
| ATCATTTGCACTCCATATTG+AGG | - | chr5_1:45929469-45929488 | Msa0733040:intron | 35.0% | |
| TCCTCTGATGATTGAAAATG+TGG | - | chr5_1:45929669-45929688 | Msa0733040:intron | 35.0% | |
| CCTCTGATGATTGAAAATGT+GGG | - | chr5_1:45929670-45929689 | Msa0733040:intron | 35.0% | |
| ! | AAGGCTTTCTTTTGTAATCC+AGG | - | chr5_1:45930068-45930087 | Msa0733040:intron | 35.0% |
| ! | AGGCTTTCTTTTGTAATCCA+GGG | - | chr5_1:45930069-45930088 | Msa0733040:intron | 35.0% |
| TTCTTCTCTTATCACATGGA+TGG | + | chr5_1:45930098-45930117 | None:intergenic | 35.0% | |
| ACAGTTCTTCTCTTATCACA+TGG | + | chr5_1:45930102-45930121 | None:intergenic | 35.0% | |
| TCTTCTTTCTTCTCTCTTTC+AGG | + | chr5_1:45930337-45930356 | None:intergenic | 35.0% | |
| GAGAAGAAAGAAGAAGTTAC+TGG | - | chr5_1:45930343-45930362 | Msa0733040:intron | 35.0% | |
| AAAGAAGAAGTTACTGGTAG+AGG | - | chr5_1:45930349-45930368 | Msa0733040:intron | 35.0% | |
| !!! | TTTAATACCCTTGGTGCTTT+TGG | - | chr5_1:45930628-45930647 | Msa0733040:five_prime_UTR | 35.0% |
| !! | ATCATTTCCAAAAGCACCAA+GGG | + | chr5_1:45930638-45930657 | None:intergenic | 35.0% |
| !! | AATCATTTCCAAAAGCACCA+AGG | + | chr5_1:45930639-45930658 | None:intergenic | 35.0% |
| !!! | AATTTTTTCTTGTGGTGGAC+GGG | + | chr5_1:45930925-45930944 | None:intergenic | 35.0% |
| TAATTGTGAACTACGTTCCA+TGG | - | chr5_1:45931165-45931184 | Msa0733040:intron | 35.0% | |
| CCATTTATCCACAATAACCA+TGG | + | chr5_1:45931185-45931204 | None:intergenic | 35.0% | |
| CCATGGTTATTGTGGATAAA+TGG | - | chr5_1:45931182-45931201 | Msa0733040:intron | 35.0% | |
| ! | AGGAATTTTGCCAGGATAAT+TGG | + | chr5_1:45931320-45931339 | None:intergenic | 35.0% |
| TATCCTGGCAAAATTCCTTA+TGG | - | chr5_1:45931322-45931341 | Msa0733040:intron | 35.0% | |
| ATTTAACCAAACATCAGGGG+AGG | + | chr5_1:45923202-45923221 | None:intergenic | 40.0% | |
| !!! | CATTTTTGAAACTAGAGGGG+AGG | + | chr5_1:45923233-45923252 | None:intergenic | 40.0% |
| AACAGAGTTAAATTGAGGGG+AGG | + | chr5_1:45923262-45923281 | None:intergenic | 40.0% | |
| ! | ATCGCAAAGTTGTTTGAGAC+AGG | + | chr5_1:45923312-45923331 | None:intergenic | 40.0% |
| ! | TGAATTGTGCCGATCCTAAA+TGG | - | chr5_1:45923344-45923363 | Msa0733040:three_prime_UTR | 40.0% |
| ! | TGCATCCAACCATTTAGGAT+CGG | + | chr5_1:45923356-45923375 | None:intergenic | 40.0% |
| ACTCATGCATCCAACCATTT+AGG | + | chr5_1:45923361-45923380 | None:intergenic | 40.0% | |
| TTGGGAATCAATACAAGGGA+AGG | - | chr5_1:45923510-45923529 | Msa0733040:intron | 40.0% | |
| TGGGAATCAATACAAGGGAA+GGG | - | chr5_1:45923511-45923530 | Msa0733040:intron | 40.0% | |
| ! | GGTATTTGTCTTTTCCGCTT+TGG | + | chr5_1:45924032-45924051 | None:intergenic | 40.0% |
| ATGGAAGTGAGGGATAAAAG+TGG | + | chr5_1:45924134-45924153 | None:intergenic | 40.0% | |
| TTGATTGTTGCAGGGGAAAA+CGG | + | chr5_1:45924204-45924223 | None:intergenic | 40.0% | |
| AGAAGTGGTTGATTGTTGCA+GGG | + | chr5_1:45924212-45924231 | None:intergenic | 40.0% | |
| AAGAAGTGGTTGATTGTTGC+AGG | + | chr5_1:45924213-45924232 | None:intergenic | 40.0% | |
| AGTGATCATCTCTGAACTTG+TGG | - | chr5_1:45924450-45924469 | Msa0733040:CDS | 40.0% | |
| ! | TCACAGATACTAGTTTCAGG+TGG | - | chr5_1:45924797-45924816 | Msa0733040:intron | 40.0% |
| !! | TCATAGTTCAAGGTTGATGG+TGG | - | chr5_1:45924875-45924894 | Msa0733040:intron | 40.0% |
| GAGTAAGTGAGGGATAAATC+TGG | + | chr5_1:45925242-45925261 | None:intergenic | 40.0% | |
| GGAAGTGAATGAGTAAGTGA+GGG | + | chr5_1:45925252-45925271 | None:intergenic | 40.0% | |
| TGGAAGTGAATGAGTAAGTG+AGG | + | chr5_1:45925253-45925272 | None:intergenic | 40.0% | |
| ATGCTTCAGGACAAATAGGT+AGG | - | chr5_1:45926558-45926577 | Msa0733040:intron | 40.0% | |
| CACATGTAGACTCCTTTGTA+TGG | - | chr5_1:45926599-45926618 | Msa0733040:intron | 40.0% | |
| TAAACTCCGAATCAGTTGCA+AGG | + | chr5_1:45926654-45926673 | None:intergenic | 40.0% | |
| GGCCGAATTTCAGATTACTA+GGG | + | chr5_1:45926780-45926799 | None:intergenic | 40.0% | |
| TGGCCGAATTTCAGATTACT+AGG | + | chr5_1:45926781-45926800 | None:intergenic | 40.0% | |
| GCCAAGTGGTTGAATTTAAG+TGG | + | chr5_1:45926893-45926912 | None:intergenic | 40.0% | |
| AATGGATAGAGACTTTGACC+AGG | + | chr5_1:45927217-45927236 | None:intergenic | 40.0% | |
| !! | CCAGGTGAATAGTTTTGCTA+TGG | + | chr5_1:45927243-45927262 | None:intergenic | 40.0% |
| CCATAGCAAAACTATTCACC+TGG | - | chr5_1:45927240-45927259 | Msa0733040:intron | 40.0% | |
| ATCAGAGGTGAGTAAGACTT+TGG | + | chr5_1:45927337-45927356 | None:intergenic | 40.0% | |
| CTCTTTCGCGAAATAATTCC+AGG | - | chr5_1:45927387-45927406 | Msa0733040:intron | 40.0% | |
| CTTATCCTACTAAGTGGAGT+CGG | - | chr5_1:45927464-45927483 | Msa0733040:intron | 40.0% | |
| GGAACAAAGCTGCAATTGTA+CGG | + | chr5_1:45927653-45927672 | None:intergenic | 40.0% | |
| CGCAAGTTCAATGTCTGATT+TGG | - | chr5_1:45927716-45927735 | Msa0733040:intron | 40.0% | |
| TGTCCTGGTATTCCATAATC+CGG | - | chr5_1:45928100-45928119 | Msa0733040:intron | 40.0% | |
| AAACCGGATTATGGAATACC+AGG | + | chr5_1:45928106-45928125 | None:intergenic | 40.0% | |
| TTTCATGGGAAACCGGATTA+TGG | + | chr5_1:45928115-45928134 | None:intergenic | 40.0% | |
| ! | GCACTGACATTTCATATTGG+AGG | - | chr5_1:45928200-45928219 | Msa0733040:intron | 40.0% |
| TTTCATATTGGAGGTCTGTC+CGG | - | chr5_1:45928209-45928228 | Msa0733040:intron | 40.0% | |
| GGTGAAACGCTTATACTTTG+AGG | - | chr5_1:45928339-45928358 | Msa0733040:intron | 40.0% | |
| ! | CAAAAGCATGTGAAGGCTAT+CGG | - | chr5_1:45928385-45928404 | Msa0733040:intron | 40.0% |
| ! | AAAAGCATGTGAAGGCTATC+GGG | - | chr5_1:45928386-45928405 | Msa0733040:intron | 40.0% |
| TTGTGGTTTCCCCATTGTTA+AGG | - | chr5_1:45928431-45928450 | Msa0733040:intron | 40.0% | |
| CTCAGAACTGTCAAAATTGC+AGG | + | chr5_1:45928821-45928840 | None:intergenic | 40.0% | |
| ATTCTTGAAGTCACCCTGTT+AGG | - | chr5_1:45928962-45928981 | Msa0733040:intron | 40.0% | |
| ! | AGTTAAGTTGCCTCCTAACA+GGG | + | chr5_1:45928978-45928997 | None:intergenic | 40.0% |
| CTACCGTGTGTATAATACGT+GGG | - | chr5_1:45929393-45929412 | Msa0733040:intron | 40.0% | |
| ! | CCCACATTTTCAATCATCAG+AGG | + | chr5_1:45929673-45929692 | None:intergenic | 40.0% |
| CAAAGCTCTACTGCAACAAA+TGG | + | chr5_1:45929736-45929755 | None:intergenic | 40.0% | |
| ! | GATGTGTCGATATCAAACAC+TGG | - | chr5_1:45929920-45929939 | Msa0733040:intron | 40.0% |
| AACGAAAAACCTTCGATCAG+AGG | - | chr5_1:45929957-45929976 | Msa0733040:intron | 40.0% | |
| CAATTCCAGGAAACATGTGT+CGG | + | chr5_1:45930134-45930153 | None:intergenic | 40.0% | |
| ! | TGGTAGAGGACTCAAGTTTT+TGG | - | chr5_1:45930363-45930382 | Msa0733040:intron | 40.0% |
| !! | GAGGACTCAAGTTTTTGGAA+TGG | - | chr5_1:45930368-45930387 | Msa0733040:intron | 40.0% |
| GTTGTGTACACGTAAAGAGA+AGG | - | chr5_1:45930573-45930592 | Msa0733040:five_prime_UTR | 40.0% | |
| TACCAACTGAGTTAAGCTCA+CGG | + | chr5_1:45930863-45930882 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+AGG | - | chr5_1:45930863-45930882 | Msa0733040:intron | 40.0% |
| ACTACGTTCCATGGTTATTG+TGG | - | chr5_1:45931174-45931193 | Msa0733040:intron | 40.0% | |
| TGGCAAAATTCCTTATGGTC+CGG | - | chr5_1:45931327-45931346 | Msa0733040:intron | 40.0% | |
| ! | TTGTGCCGATCCTAAATGGT+TGG | - | chr5_1:45923348-45923367 | Msa0733040:three_prime_UTR | 45.0% |
| GGGAATCAATACAAGGGAAG+GGG | - | chr5_1:45923512-45923531 | Msa0733040:intron | 45.0% | |
| AGAAAAACTTAGGGGAGGTG+AGG | - | chr5_1:45923962-45923981 | Msa0733040:intron | 45.0% | |
| GAAAAACTTAGGGGAGGTGA+GGG | - | chr5_1:45923963-45923982 | Msa0733040:intron | 45.0% | |
| GAATGAGAGTCACAGAACAG+AGG | + | chr5_1:45924175-45924194 | None:intergenic | 45.0% | |
| GAAGTGGTTGATTGTTGCAG+GGG | + | chr5_1:45924211-45924230 | None:intergenic | 45.0% | |
| CTCTTCTTCTCCTTCTTCTC+TGG | - | chr5_1:45924240-45924259 | Msa0733040:intron | 45.0% | |
| GCAACGTACGTATATGCTTC+AGG | - | chr5_1:45926545-45926564 | Msa0733040:intron | 45.0% | |
| TACGGTCCTTGCAACTGATT+CGG | - | chr5_1:45926645-45926664 | Msa0733040:intron | 45.0% | |
| ! | CGTTTTCCCTGTGAACCATA+TGG | + | chr5_1:45926755-45926774 | None:intergenic | 45.0% |
| AGTTTGAACAACAGGCCAAG+TGG | + | chr5_1:45926907-45926926 | None:intergenic | 45.0% | |
| CCACTTAGTAGGATAAGGCT+TGG | + | chr5_1:45927461-45927480 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCCTACTAAG+TGG | - | chr5_1:45927458-45927477 | Msa0733040:intron | 45.0% |
| CGACTCCACTTAGTAGGATA+AGG | + | chr5_1:45927466-45927485 | None:intergenic | 45.0% | |
| CCTTGAACCGGCCTTTATTA+CGG | - | chr5_1:45927612-45927631 | Msa0733040:intron | 45.0% | |
| GCATGCCTAACCTGTATACA+AGG | + | chr5_1:45927848-45927867 | None:intergenic | 45.0% | |
| GATGCAAACCTAACTCCTCT+TGG | - | chr5_1:45927932-45927951 | Msa0733040:intron | 45.0% | |
| ATGTCAGTGCTACATTGAGC+AGG | + | chr5_1:45928190-45928209 | None:intergenic | 45.0% | |
| CGATAGAGTGTGAGGAATCA+TGG | + | chr5_1:45928864-45928883 | None:intergenic | 45.0% | |
| TTACCAACTCTCTCAACACG+TGG | + | chr5_1:45928908-45928927 | None:intergenic | 45.0% | |
| ! | CAGTTAAGTTGCCTCCTAAC+AGG | + | chr5_1:45928979-45928998 | None:intergenic | 45.0% |
| !!! | CATCGGGACGTTCAGTTTTT+TGG | + | chr5_1:45929004-45929023 | None:intergenic | 45.0% |
| ! | GCTCTTTTGGGCCTATTATG+AGG | + | chr5_1:45929043-45929062 | None:intergenic | 45.0% |
| AAAAAAGGTCGTGTGGCACA+AGG | - | chr5_1:45929137-45929156 | Msa0733040:intron | 45.0% | |
| CCACGTATTATACACACGGT+AGG | + | chr5_1:45929395-45929414 | None:intergenic | 45.0% | |
| CCTACCGTGTGTATAATACG+TGG | - | chr5_1:45929392-45929411 | Msa0733040:intron | 45.0% | |
| GCATTGCAGGACAATGCAAA+CGG | - | chr5_1:45929597-45929616 | Msa0733040:intron | 45.0% | |
| GTGCTAAGACTAGAAACTGC+AGG | + | chr5_1:45929709-45929728 | None:intergenic | 45.0% | |
| CTCTACTGCAACAAATGGTG+GGG | + | chr5_1:45929731-45929750 | None:intergenic | 45.0% | |
| GCTCTACTGCAACAAATGGT+GGG | + | chr5_1:45929732-45929751 | None:intergenic | 45.0% | |
| AGCTCTACTGCAACAAATGG+TGG | + | chr5_1:45929733-45929752 | None:intergenic | 45.0% | |
| CTAAAGACTCCTCTGATCGA+AGG | + | chr5_1:45929969-45929988 | None:intergenic | 45.0% | |
| TGCAGCTAGACCATATCATG+AGG | + | chr5_1:45930194-45930213 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGCTCAC+GGG | + | chr5_1:45930862-45930881 | None:intergenic | 45.0% | |
| ! | GGACCATAAGGAATTTTGCC+AGG | + | chr5_1:45931328-45931347 | None:intergenic | 45.0% |
| CTCTAGTCAGTAGCATCACT+GGG | + | chr5_1:45931358-45931377 | None:intergenic | 45.0% | |
| TCTCTAGTCAGTAGCATCAC+TGG | + | chr5_1:45931359-45931378 | None:intergenic | 45.0% | |
| TCGGTCGTATGAAACAGTCA+TGG | - | chr5_1:45931432-45931451 | Msa0733040:intron | 45.0% | |
| !!! | AAATTTTTTTTTTATTTTTC+AGG | - | chr5_1:45931505-45931524 | Msa0733040:intron | 5.0% |
| CAATGACCTCCCCTGATGTT+TGG | - | chr5_1:45923193-45923212 | Msa0733040:three_prime_UTR | 50.0% | |
| AGAGGCTCCCAACCAAGTTA+GGG | - | chr5_1:45923621-45923640 | Msa0733040:intron | 50.0% | |
| GACGTACGTACCAGAGAAGA+AGG | + | chr5_1:45924253-45924272 | None:intergenic | 50.0% | |
| GCAGTTATGGATACTGCACC+TGG | - | chr5_1:45927196-45927215 | Msa0733040:intron | 50.0% | |
| ! | TGTAGCCGACTCCACTTAGT+AGG | + | chr5_1:45927472-45927491 | None:intergenic | 50.0% |
| CAACCAGCTGAACCTTGAAC+CGG | - | chr5_1:45927600-45927619 | Msa0733040:intron | 50.0% | |
| ! | CCGTAATAAAGGCCGGTTCA+AGG | + | chr5_1:45927615-45927634 | None:intergenic | 50.0% |
| ATTGAACTTGCGGGAGCTCT+AGG | + | chr5_1:45927708-45927727 | None:intergenic | 50.0% | |
| ATACAGGTTAGGCATGCCCA+AGG | - | chr5_1:45927851-45927870 | Msa0733040:intron | 50.0% | |
| CAAACCTAACTCCTCTTGGC+TGG | - | chr5_1:45927936-45927955 | Msa0733040:intron | 50.0% | |
| TGTCAGTCTCAAGTCTGCGT+AGG | - | chr5_1:45928279-45928298 | Msa0733040:intron | 50.0% | |
| CAACTCTCTCAACACGTGGA+AGG | + | chr5_1:45928904-45928923 | None:intergenic | 50.0% | |
| CTTCCACGTGTTGAGAGAGT+TGG | - | chr5_1:45928902-45928921 | Msa0733040:intron | 50.0% | |
| CTTGAAGTCACCCTGTTAGG+AGG | - | chr5_1:45928965-45928984 | Msa0733040:intron | 50.0% | |
| AGGACAATGCAAACGGCTGT+TGG | - | chr5_1:45929604-45929623 | Msa0733040:intron | 50.0% | |
| CAAACGGCTGTTGGAGTCTT+TGG | - | chr5_1:45929613-45929632 | Msa0733040:intron | 50.0% | |
| AGAGCTTTGCCGAGAGCAAA+TGG | - | chr5_1:45929747-45929766 | Msa0733040:intron | 50.0% | |
| TATCACATGGATGGAGTCCC+TGG | + | chr5_1:45930089-45930108 | None:intergenic | 50.0% | |
| !! | GAGTACCGACACATGTTTCC+TGG | - | chr5_1:45930126-45930145 | Msa0733040:intron | 50.0% |
| TTGAAACCGACGACGACACT+TGG | - | chr5_1:45930305-45930324 | Msa0733040:intron | 50.0% | |
| ! | TTTCCACCAAGTGTCGTCGT+CGG | + | chr5_1:45930314-45930333 | None:intergenic | 50.0% |
| CCAACTGAGTTAAGCTCACG+GGG | + | chr5_1:45930861-45930880 | None:intergenic | 50.0% | |
| GTAGCATCACTGGGAAGATC+CGG | + | chr5_1:45931349-45931368 | None:intergenic | 50.0% | |
| CTAACTTGGTTGGGAGCCTC+TGG | + | chr5_1:45923622-45923641 | None:intergenic | 55.0% | |
| CAGAGGCTCCCAACCAAGTT+AGG | - | chr5_1:45923620-45923639 | Msa0733040:intron | 55.0% | |
| CTCTCTCAACACGTGGAAGG+TGG | + | chr5_1:45928901-45928920 | None:intergenic | 55.0% | |
| ACGGCTGTTGGAGTCTTTGG+TGG | - | chr5_1:45929616-45929635 | Msa0733040:intron | 55.0% | |
| CGGCTGTTGGAGTCTTTGGT+GGG | - | chr5_1:45929617-45929636 | Msa0733040:intron | 55.0% | |
| GGCTGTTGGAGTCTTTGGTG+GGG | - | chr5_1:45929618-45929637 | Msa0733040:intron | 55.0% | |
| GGTGGGGAAGCAAACACTGA+TGG | - | chr5_1:45929634-45929653 | Msa0733040:intron | 55.0% | |
| AAACCGACGACGACACTTGG+TGG | - | chr5_1:45930308-45930327 | Msa0733040:intron | 55.0% | |
| CCCCGTGAGCTTAACTCAGT+TGG | - | chr5_1:45930858-45930877 | Msa0733040:intron | 55.0% | |
| CTGGGAAGATCCGGACCATA+AGG | + | chr5_1:45931340-45931359 | None:intergenic | 55.0% | |
| ! | AGGCCGGTTCAAGGTTCAGC+TGG | + | chr5_1:45927606-45927625 | None:intergenic | 60.0% |
| !! | CTTGCGGGAGCTCTAGGTCA+TGG | + | chr5_1:45927702-45927721 | None:intergenic | 60.0% |
| GCTGCCAGCCAAGAGGAGTT+AGG | + | chr5_1:45927943-45927962 | None:intergenic | 60.0% | |
| AACTCCTCTTGGCTGGCAGC+AGG | - | chr5_1:45927943-45927962 | Msa0733040:intron | 60.0% | |
| ACTACCTGCTGCCAGCCAAG+AGG | + | chr5_1:45927950-45927969 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 45923098 | 45931693 | 45923098 | ID=Msa0733040;Name=Msa0733040 |
| chr5_1 | mRNA | 45923098 | 45931693 | 45923098 | ID=Msa0733040-mRNA-1;Parent=Msa0733040;Name=Msa0733040-mRNA-1;_AED=0.24;_eAED=0.24;_QI=344|1|1|1|0.8|0.72|11|318|273 |
| chr5_1 | exon | 45923098 | 45923500 | 45923098 | ID=Msa0733040-mRNA-1:exon:13130;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45923588 | 45923632 | 45923588 | ID=Msa0733040-mRNA-1:exon:13129;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45924099 | 45924218 | 45924099 | ID=Msa0733040-mRNA-1:exon:13128;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45924402 | 45924487 | 45924402 | ID=Msa0733040-mRNA-1:exon:13127;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45924627 | 45924701 | 45924627 | ID=Msa0733040-mRNA-1:exon:13126;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45925023 | 45925185 | 45925023 | ID=Msa0733040-mRNA-1:exon:13125;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45926339 | 45926418 | 45926339 | ID=Msa0733040-mRNA-1:exon:13124;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45926827 | 45926934 | 45926827 | ID=Msa0733040-mRNA-1:exon:13123;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45927530 | 45927591 | 45927530 | ID=Msa0733040-mRNA-1:exon:13122;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45930530 | 45930790 | 45930530 | ID=Msa0733040-mRNA-1:exon:13121;Parent=Msa0733040-mRNA-1 |
| chr5_1 | exon | 45931613 | 45931693 | 45931613 | ID=Msa0733040-mRNA-1:exon:13120;Parent=Msa0733040-mRNA-1 |
| chr5_1 | five_prime_UTR | 45931613 | 45931693 | 45931613 | ID=Msa0733040-mRNA-1:five_prime_utr;Parent=Msa0733040-mRNA-1 |
| chr5_1 | five_prime_UTR | 45930530 | 45930790 | 45930530 | ID=Msa0733040-mRNA-1:five_prime_utr;Parent=Msa0733040-mRNA-1 |
| chr5_1 | five_prime_UTR | 45927590 | 45927591 | 45927590 | ID=Msa0733040-mRNA-1:five_prime_utr;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45927530 | 45927589 | 45927530 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45926827 | 45926934 | 45926827 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45926339 | 45926418 | 45926339 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45925023 | 45925185 | 45925023 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45924627 | 45924701 | 45924627 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45924402 | 45924487 | 45924402 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45924099 | 45924218 | 45924099 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45923588 | 45923632 | 45923588 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | CDS | 45923416 | 45923500 | 45923416 | ID=Msa0733040-mRNA-1:cds;Parent=Msa0733040-mRNA-1 |
| chr5_1 | three_prime_UTR | 45923098 | 45923415 | 45923098 | ID=Msa0733040-mRNA-1:three_prime_utr;Parent=Msa0733040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
