Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734800 | XP_039690018.1 | 94.245 | 278 | 15 | 1 | 118 | 394 | 15 | 292 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734800 | A0A396HTG6 | 94.245 | 278 | 15 | 1 | 118 | 394 | 15 | 292 | 0.0 | 535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0734790 | Msa0734800 | 0.900268 | 8.678442e-78 | -8.615850e-47 |
| Msa0734800 | Msa0813950 | 0.850199 | 1.981396e-60 | -8.615850e-47 |
| Msa0734800 | Msa0854620 | 0.910893 | 1.124701e-82 | -8.615850e-47 |
| Msa0734800 | Msa1009190 | 0.802253 | 6.125037e-49 | -8.615850e-47 |
| Msa0734800 | Msa1198090 | 0.816174 | 6.336725e-52 | -8.615850e-47 |
| Msa0193010 | Msa0734800 | 0.813530 | 2.443247e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734800 | MtrunA17_Chr5g0431801 | 94.245 | 278 | 15 | 1 | 118 | 394 | 15 | 292 | 0.0 | 535 |
| Msa0734800 | MtrunA17_Chr5g0431851 | 91.450 | 269 | 22 | 1 | 117 | 385 | 14 | 281 | 4.43e-172 | 481 |
| Msa0734800 | MtrunA17_Chr5g0431821 | 72.391 | 297 | 63 | 1 | 117 | 394 | 14 | 310 | 9.73e-147 | 422 |
| Msa0734800 | MtrunA17_Chr5g0431811 | 56.592 | 311 | 99 | 5 | 118 | 394 | 15 | 323 | 3.13e-101 | 323 |
| Msa0734800 | MtrunA17_Chr5g0431741 | 56.184 | 283 | 117 | 5 | 117 | 394 | 14 | 294 | 1.81e-94 | 297 |
| Msa0734800 | MtrunA17_Chr5g0431761 | 53.521 | 284 | 124 | 6 | 117 | 394 | 14 | 295 | 1.28e-92 | 289 |
| Msa0734800 | MtrunA17_Chr5g0432041 | 53.237 | 278 | 125 | 3 | 117 | 394 | 15 | 287 | 1.57e-90 | 286 |
| Msa0734800 | MtrunA17_Chr5g0432091 | 51.761 | 284 | 127 | 6 | 119 | 394 | 16 | 297 | 1.79e-79 | 258 |
| Msa0734800 | MtrunA17_Chr5g0431991 | 46.643 | 283 | 146 | 4 | 112 | 394 | 9 | 286 | 3.17e-75 | 240 |
| Msa0734800 | MtrunA17_Chr5g0432181 | 51.190 | 252 | 101 | 5 | 117 | 348 | 14 | 263 | 5.14e-75 | 236 |
| Msa0734800 | MtrunA17_Chr5g0431981 | 47.331 | 281 | 132 | 5 | 117 | 394 | 14 | 281 | 9.81e-74 | 234 |
| Msa0734800 | MtrunA17_Chr3g0104851 | 42.759 | 290 | 121 | 6 | 117 | 394 | 28 | 284 | 2.85e-65 | 220 |
| Msa0734800 | MtrunA17_Chr5g0444661 | 63.158 | 152 | 54 | 2 | 117 | 268 | 15 | 164 | 1.72e-59 | 199 |
| Msa0734800 | MtrunA17_Chr5g0431751 | 44.086 | 279 | 115 | 7 | 118 | 393 | 15 | 255 | 8.53e-59 | 193 |
| Msa0734800 | MtrunA17_Chr5g0431891 | 62.195 | 164 | 43 | 1 | 250 | 394 | 1 | 164 | 1.33e-55 | 184 |
| Msa0734800 | MtrunA17_Chr7g0231451 | 50.980 | 204 | 85 | 7 | 108 | 305 | 6 | 200 | 3.38e-54 | 181 |
| Msa0734800 | MtrunA17_Chr5g0431921 | 47.938 | 194 | 95 | 5 | 116 | 306 | 13 | 203 | 8.38e-49 | 166 |
| Msa0734800 | MtrunA17_Chr5g0432051 | 55.128 | 156 | 68 | 2 | 120 | 275 | 28 | 181 | 7.86e-45 | 155 |
| Msa0734800 | MtrunA17_Chr5g0432031 | 49.383 | 162 | 79 | 3 | 115 | 275 | 23 | 182 | 1.03e-42 | 150 |
| Msa0734800 | MtrunA17_Chr5g0431951 | 50.000 | 126 | 57 | 3 | 108 | 233 | 23 | 142 | 3.74e-33 | 121 |
| Msa0734800 | MtrunA17_Chr6g0482231 | 32.618 | 233 | 149 | 3 | 64 | 296 | 59 | 283 | 3.32e-28 | 113 |
| Msa0734800 | MtrunA17_Chr6g0482191 | 37.079 | 178 | 111 | 1 | 120 | 297 | 477 | 653 | 9.94e-27 | 112 |
| Msa0734800 | MtrunA17_Chr5g0431961 | 60.465 | 86 | 32 | 2 | 108 | 193 | 7 | 90 | 1.41e-24 | 96.7 |
| Msa0734800 | MtrunA17_Chr5g0431901 | 41.139 | 158 | 52 | 3 | 254 | 388 | 1 | 140 | 2.27e-23 | 94.7 |
| Msa0734800 | MtrunA17_Chr5g0444671 | 38.750 | 160 | 73 | 4 | 121 | 280 | 15 | 149 | 1.21e-20 | 88.2 |
| Msa0734800 | MtrunA17_Chr6g0482151 | 37.681 | 138 | 84 | 2 | 130 | 267 | 4 | 139 | 3.26e-19 | 84.3 |
| Msa0734800 | MtrunA17_Chr5g0431911 | 32.796 | 186 | 84 | 4 | 116 | 300 | 13 | 158 | 1.75e-13 | 67.8 |
| Msa0734800 | MtrunA17_Chr6g0480951 | 41.860 | 86 | 47 | 2 | 121 | 204 | 226 | 310 | 2.42e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 97 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCGGTGCTGGTCAGTTC+TGG | 0.189222 | 5_1:-49562016 | Msa0734800:CDS |
| AAATTCAGTGGTTCTTAATA+TGG | 0.196083 | 5_1:-49555598 | Msa0734800:CDS |
| GGATTTGCTGCTGTTGTTGC+TGG | 0.254444 | 5_1:-49556110 | Msa0734800:CDS |
| CAACTGGCTAGTACTAATTT+TGG | 0.264131 | 5_1:-49555567 | Msa0734800:CDS |
| TCTTCCTTCAACTATCTCTT+TGG | 0.283998 | 5_1:-49556065 | Msa0734800:CDS |
| TGTTTCCTCTAGGTCTTTGA+TGG | 0.289475 | 5_1:+49555389 | None:intergenic |
| AAAGTCCATTCAAATGGTTT+TGG | 0.296790 | 5_1:-49555490 | Msa0734800:CDS |
| TCATACAACATTTGCTGTAT+TGG | 0.315167 | 5_1:-49555928 | Msa0734800:CDS |
| GGCAAGCAAGCTAGGATAAA+AGG | 0.323513 | 5_1:+49557130 | None:intergenic |
| GGTTGGATTGTGAGGGTGAT+GGG | 0.336134 | 5_1:-49561978 | Msa0734800:CDS |
| GGCACCTTCTTCTTTGTGTA+TGG | 0.356315 | 5_1:-49557156 | Msa0734800:CDS |
| GGGTTGGATTGTGAGGGTGA+TGG | 0.358799 | 5_1:-49561979 | Msa0734800:CDS |
| GGATTGTGAGGGTGATGGGT+TGG | 0.368122 | 5_1:-49561974 | Msa0734800:CDS |
| TGATGGGTTGGTTGAGGATG+AGG | 0.391093 | 5_1:-49561962 | Msa0734800:CDS |
| TGAGGGTGATGGGTTGGTTG+AGG | 0.398761 | 5_1:-49561968 | Msa0734800:CDS |
| CGCCTATGTGCAGTGGCAGA+GGG | 0.399602 | 5_1:-49557000 | Msa0734800:CDS |
| TAATATGGATTCTCTACAAC+TGG | 0.399665 | 5_1:-49555583 | Msa0734800:CDS |
| TCCTTCAACTATCTCTTTGG+AGG | 0.401422 | 5_1:-49556062 | Msa0734800:CDS |
| TGGCGGTGCTGGTCAGTTCT+GGG | 0.403767 | 5_1:-49562015 | Msa0734800:CDS |
| ATGTGCATCCTTTGCTGTCA+CGG | 0.423858 | 5_1:-49555832 | Msa0734800:CDS |
| GAAGTTAAGGCTATAACGTT+TGG | 0.425166 | 5_1:+49557109 | None:intergenic |
| TGCAGTGGCAGAGGGGCTAT+AGG | 0.429094 | 5_1:-49556992 | Msa0734800:CDS |
| GCAGTGGCAGAGGGGCTATA+GGG | 0.432755 | 5_1:-49556991 | Msa0734800:CDS |
| AGGCTCCAAAACCATTTGAA+TGG | 0.441764 | 5_1:+49555485 | None:intergenic |
| CCCACAAATCTCCACACCTT+TGG | 0.444313 | 5_1:+49556131 | None:intergenic |
| GAACCACTGAATTTCCATCT+TGG | 0.449916 | 5_1:+49555607 | None:intergenic |
| CCAAAGGTGTGGAGATTTGT+GGG | 0.449986 | 5_1:-49556131 | Msa0734800:CDS |
| AGAGGAAACAACAAATGTTA+TGG | 0.453162 | 5_1:-49555376 | Msa0734800:CDS |
| AAATTCAAAGTCCATTCAAA+TGG | 0.453874 | 5_1:-49555496 | Msa0734800:CDS |
| GTGGTTGTGGTGGTCGTGCG+AGG | 0.455270 | 5_1:+49557065 | None:intergenic |
| CAACGCGTCAAACATGAAGT+TGG | 0.460762 | 5_1:+49555422 | None:intergenic |
| GGGTGATGTCAGGTGTGGGT+TGG | 0.462283 | 5_1:-49561995 | Msa0734800:CDS |
| GCCGCCACCATGGGAAGTTA+AGG | 0.463615 | 5_1:+49557096 | None:intergenic |
| CTCTCTCAGCGTTGGTAGGA+CGG | 0.468286 | 5_1:-49561914 | Msa0734800:CDS |
| CCACTGCACATAGGCGAGTA+AGG | 0.469000 | 5_1:+49557007 | None:intergenic |
| CAGGTGTGGGTTGGATTGTG+AGG | 0.472620 | 5_1:-49561986 | Msa0734800:CDS |
| TAACATTTGTTGTTTCCTCT+AGG | 0.473814 | 5_1:+49555379 | None:intergenic |
| TGGTTGTGGTGGTCGTGCGA+GGG | 0.478022 | 5_1:+49557066 | None:intergenic |
| GAAATGAGACTCCATGCATC+TGG | 0.481164 | 5_1:+49555855 | None:intergenic |
| TCCTCCAAAGAGATAGTTGA+AGG | 0.485636 | 5_1:+49556061 | None:intergenic |
| GGTCAGTTCTGGGTGATGTC+AGG | 0.487797 | 5_1:-49562005 | Msa0734800:CDS |
| ACACTCACAATCGGTGATAG+AGG | 0.488023 | 5_1:-49555448 | Msa0734800:CDS |
| TCGCCTATGTGCAGTGGCAG+AGG | 0.488230 | 5_1:-49557001 | Msa0734800:CDS |
| ACAAATGTTATGGCGAGGGC+CGG | 0.488972 | 5_1:-49555366 | Msa0734800:CDS |
| CAAATAGAAGGTGGTGGTGG+TGG | 0.489273 | 5_1:+49557046 | None:intergenic |
| TCATGTGTGGATGGCGGTGC+TGG | 0.490117 | 5_1:-49562026 | Msa0734800:CDS |
| TAACGTTTGGCAAGCAAGCT+AGG | 0.493830 | 5_1:+49557122 | None:intergenic |
| CCGCCTAAAAGACAAATAGA+AGG | 0.493954 | 5_1:+49557034 | None:intergenic |
| AACGCGTCAAACATGAAGTT+GGG | 0.499337 | 5_1:+49555423 | None:intergenic |
| TCAACTATCTCTTTGGAGGA+TGG | 0.506399 | 5_1:-49556058 | Msa0734800:CDS |
| TTCTGGGTGATGTCAGGTGT+GGG | 0.508312 | 5_1:-49561999 | Msa0734800:CDS |
| GCCTTAACTTCCCATGGTGG+CGG | 0.511452 | 5_1:-49557097 | Msa0734800:CDS |
| CAAATGTTATGGCGAGGGCC+GGG | 0.513454 | 5_1:-49555365 | Msa0734800:CDS |
| AAAACTTAAACACTCACAAT+CGG | 0.520932 | 5_1:-49555457 | Msa0734800:CDS |
| GGCAACACTCAAGAAGTCAT+TGG | 0.523682 | 5_1:-49555959 | Msa0734800:CDS |
| TCTAGCATCTATTGAAGGAA+AGG | 0.524621 | 5_1:+49555653 | None:intergenic |
| AGGTGTGGGTTGGATTGTGA+GGG | 0.524844 | 5_1:-49561985 | Msa0734800:CDS |
| ACCAAAATTTCATGTGTGGA+TGG | 0.525791 | 5_1:-49562035 | None:intergenic |
| TGCATAATACGCCAGATGCA+TGG | 0.531259 | 5_1:-49555866 | Msa0734800:CDS |
| GGTTGTGGTGGTCGTGCGAG+GGG | 0.535210 | 5_1:+49557067 | None:intergenic |
| GGGAGTTAAGCCGCCACCAT+GGG | 0.537734 | 5_1:+49557087 | None:intergenic |
| TTGACTCTCTCAGCGTTGGT+AGG | 0.548650 | 5_1:-49561918 | Msa0734800:CDS |
| CAGTGTTCTGAATTCCAAGA+TGG | 0.558001 | 5_1:-49555621 | Msa0734800:CDS |
| AGGACGGCTAGCCGTGGAGA+AGG | 0.559198 | 5_1:-49561898 | Msa0734800:CDS |
| ATTGTTGACTCTCTCAGCGT+TGG | 0.565201 | 5_1:-49561922 | Msa0734800:CDS |
| AGACAAATAGAAGGTGGTGG+TGG | 0.565305 | 5_1:+49557043 | None:intergenic |
| GAAACCATACACAAAGAAGA+AGG | 0.566016 | 5_1:+49557152 | None:intergenic |
| GCCAAAGGTGTGGAGATTTG+TGG | 0.566628 | 5_1:-49556132 | Msa0734800:CDS |
| GGGGAGTTAAGCCGCCACCA+TGG | 0.579499 | 5_1:+49557086 | None:intergenic |
| GTTATAGCCTTAACTTCCCA+TGG | 0.580712 | 5_1:-49557103 | Msa0734800:CDS |
| AACAACAAATGTTATGGCGA+GGG | 0.585862 | 5_1:-49555370 | Msa0734800:CDS |
| GTTCTGGGTGATGTCAGGTG+TGG | 0.592383 | 5_1:-49562000 | Msa0734800:CDS |
| TCACGGCGCTTAGTTTGTCA+AGG | 0.598752 | 5_1:-49555815 | Msa0734800:CDS |
| GCAGAGGGGCTATAGGGCCA+AGG | 0.599786 | 5_1:-49556985 | Msa0734800:intron |
| ACTAAGCGCCGTGACAGCAA+AGG | 0.610060 | 5_1:+49555824 | None:intergenic |
| CGTGTGAAGGCACTCGAGCA+CGG | 0.617949 | 5_1:-49555519 | Msa0734800:CDS |
| AAACAACAAATGTTATGGCG+AGG | 0.620335 | 5_1:-49555371 | Msa0734800:CDS |
| ATTCCAAGATGGAAATTCAG+TGG | 0.625640 | 5_1:-49555610 | Msa0734800:CDS |
| AAAACTCGAGACTCGTGTGA+AGG | 0.633334 | 5_1:-49555532 | Msa0734800:CDS |
| GGAAACCAAAATTTCATGTG+TGG | 0.634375 | 5_1:-49562039 | None:intergenic |
| AAAAGACAAATAGAAGGTGG+TGG | 0.635673 | 5_1:+49557040 | None:intergenic |
| ATGTGTACAACAATAGTCGT+AGG | 0.639424 | 5_1:-49555323 | Msa0734800:CDS |
| CTATTGAAGGAAAGGATGAA+CGG | 0.640738 | 5_1:+49555661 | None:intergenic |
| CTTTGGAGGATGGACCATGT+TGG | 0.645605 | 5_1:-49556048 | Msa0734800:CDS |
| CCTTACTCGCCTATGTGCAG+TGG | 0.649193 | 5_1:-49557007 | Msa0734800:CDS |
| GGATGATGCAGCCAAAGGTG+TGG | 0.649228 | 5_1:-49556142 | Msa0734800:intron |
| GCCCCTCTGCCACTGCACAT+AGG | 0.659231 | 5_1:+49556998 | None:intergenic |
| CCTAAAAGACAAATAGAAGG+TGG | 0.659251 | 5_1:+49557037 | None:intergenic |
| GTTGGTAGGACGGCTAGCCG+TGG | 0.675121 | 5_1:-49561904 | Msa0734800:CDS |
| CTTACATCGATCCTTCTCCA+CGG | 0.677243 | 5_1:+49561887 | None:intergenic |
| GCCTATGTGCAGTGGCAGAG+GGG | 0.678071 | 5_1:-49556999 | Msa0734800:CDS |
| ATAGCCTTAACTTCCCATGG+TGG | 0.690820 | 5_1:-49557100 | Msa0734800:CDS |
| AGAAACCATCAAAGACCTAG+AGG | 0.695509 | 5_1:-49555394 | Msa0734800:CDS |
| TGAGTGTTGCCATATCCTTG+CGG | 0.704895 | 5_1:+49555971 | None:intergenic |
| AAAATTTCATGTGTGGATGG+CGG | 0.720277 | 5_1:-49562032 | None:intergenic |
| TCAAGGAACGAAACTCAATG+CGG | 0.732487 | 5_1:-49555798 | Msa0734800:CDS |
| GTAAAGAGTTATCACCAACA+TGG | 0.757087 | 5_1:+49556034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTAATTATATAACTT+TGG | - | chr5_1:49556249-49556268 | Msa0734800:intron | 10.0% |
| !!! | TATCAATTTTTCTTTTATTA+AGG | + | chr5_1:49558425-49558444 | None:intergenic | 10.0% |
| !!! | TATAACTTTTCAAAATAATA+TGG | - | chr5_1:49559854-49559873 | Msa0734800:intron | 10.0% |
| !!! | GCATTATATTATTTTTTTTA+AGG | + | chr5_1:49559976-49559995 | None:intergenic | 10.0% |
| !!! | ATATAAAAATTTTTTTTGGT+GGG | + | chr5_1:49560400-49560419 | None:intergenic | 10.0% |
| !!! | TACCATATAAAAATTTTTTT+TGG | + | chr5_1:49560404-49560423 | None:intergenic | 10.0% |
| !!! | TATACAATTTAATTTTTTGA+TGG | - | chr5_1:49560484-49560503 | Msa0734800:intron | 10.0% |
| !! | TATATTATAGTTTATATTTG+TGG | - | chr5_1:49560550-49560569 | Msa0734800:intron | 10.0% |
| !! | ATTATTTATTTATTCAAGAG+TGG | - | chr5_1:49555579-49555598 | Msa0734800:CDS | 15.0% |
| !! | TGAATAAAATAGTAATCTAA+GGG | - | chr5_1:49555634-49555653 | Msa0734800:CDS | 15.0% |
| !! | AAAAAAAATACAAACAGAAT+TGG | - | chr5_1:49555694-49555713 | Msa0734800:CDS | 15.0% |
| !! | TCATATAAATTAGAATTTAG+AGG | + | chr5_1:49556193-49556212 | None:intergenic | 15.0% |
| !! | ATTTATCCTTAATGTATTTA+GGG | - | chr5_1:49556935-49556954 | Msa0734800:intron | 15.0% |
| !! | GAAATTCAAATTTAATAGTT+TGG | + | chr5_1:49557038-49557057 | None:intergenic | 15.0% |
| !!! | TAATACCATATTAATTTGAA+CGG | + | chr5_1:49557320-49557339 | None:intergenic | 15.0% |
| !! | TAAAAAAACAATAGTTGATT+TGG | + | chr5_1:49559519-49559538 | None:intergenic | 15.0% |
| !!! | GAAAAGATATTTATTTTCAA+GGG | + | chr5_1:49559907-49559926 | None:intergenic | 15.0% |
| !!! | TGAAAAGATATTTATTTTCA+AGG | + | chr5_1:49559908-49559927 | None:intergenic | 15.0% |
| !!! | CTTTTAAGAATGTTATATTT+TGG | - | chr5_1:49560054-49560073 | Msa0734800:intron | 15.0% |
| !!! | TAATTTGTGAAATAATAGAA+AGG | - | chr5_1:49560167-49560186 | Msa0734800:intron | 15.0% |
| !!! | TATAAAAATTTTTTTTGGTG+GGG | + | chr5_1:49560399-49560418 | None:intergenic | 15.0% |
| !!! | CATATAAAAATTTTTTTTGG+TGG | + | chr5_1:49560401-49560420 | None:intergenic | 15.0% |
| !!! | CACCAAAAAAAATTTTTATA+TGG | - | chr5_1:49560399-49560418 | Msa0734800:intron | 15.0% |
| !! | CAATATAACAAATGTAATAT+TGG | + | chr5_1:49560730-49560749 | None:intergenic | 15.0% |
| !!! | TATTACATTTGTTATATTGT+TGG | - | chr5_1:49560731-49560750 | Msa0734800:intron | 15.0% |
| !!! | ATTACTATTTTATTCACCTT+TGG | + | chr5_1:49555630-49555649 | None:intergenic | 20.0% |
| !! | GTGAATAAAATAGTAATCTA+AGG | - | chr5_1:49555633-49555652 | Msa0734800:CDS | 20.0% |
| !!! | TTGTCTTATTTTTTGAACTT+GGG | + | chr5_1:49555949-49555968 | None:intergenic | 20.0% |
| !!! | AATTTTAAACTTGAGTAACT+TGG | + | chr5_1:49556283-49556302 | None:intergenic | 20.0% |
| !!! | TAACATGATTTTAGTTCAAA+GGG | + | chr5_1:49556538-49556557 | None:intergenic | 20.0% |
| !! | GATTTATCCTTAATGTATTT+AGG | - | chr5_1:49556934-49556953 | Msa0734800:intron | 20.0% |
| !! | GTATTATTACCATTCTATTA+TGG | - | chr5_1:49557334-49557353 | Msa0734800:intron | 20.0% |
| !!! | ATTTTCTATTTAAGGAGAAA+TGG | + | chr5_1:49557451-49557470 | None:intergenic | 20.0% |
| !! | TTCGATAATATATGATTCTT+CGG | + | chr5_1:49557571-49557590 | None:intergenic | 20.0% |
| !! | AAGAATCATATATTATCGAA+GGG | - | chr5_1:49557571-49557590 | Msa0734800:intron | 20.0% |
| !! | ATATAGAAAGAATGAGAATA+TGG | + | chr5_1:49558221-49558240 | None:intergenic | 20.0% |
| !! | ATTCTCATTCTTTCTATATA+TGG | - | chr5_1:49558222-49558241 | Msa0734800:intron | 20.0% |
| !! | AATGAGTAATTAGACTTAAT+GGG | + | chr5_1:49558256-49558275 | None:intergenic | 20.0% |
| !! | AAATGAGTAATTAGACTTAA+TGG | + | chr5_1:49558257-49558276 | None:intergenic | 20.0% |
| !! | ACTGTATTTATGAAAATAGT+AGG | + | chr5_1:49558378-49558397 | None:intergenic | 20.0% |
| !!! | CTATTTTCATAAATACAGTA+AGG | - | chr5_1:49558379-49558398 | Msa0734800:intron | 20.0% |
| !! | AGACTCATAACTATTTAATT+AGG | + | chr5_1:49558528-49558547 | None:intergenic | 20.0% |
| !!! | TATAACATTTGTTCATGTTT+TGG | - | chr5_1:49558971-49558990 | Msa0734800:intron | 20.0% |
| !!! | TTGTTTTTTTTTTTTACGTC+CGG | + | chr5_1:49559673-49559692 | None:intergenic | 20.0% |
| !!! | ACCATGTTTTTTGTTTTTTA+AGG | - | chr5_1:49559813-49559832 | Msa0734800:intron | 20.0% |
| !! | TCCTTAAAAAACAAAAAACA+TGG | + | chr5_1:49559817-49559836 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTTAAGGGTACT+TGG | + | chr5_1:49559968-49559987 | None:intergenic | 20.0% |
| !!! | CTATTTGAATAGAAATTTTG+AGG | + | chr5_1:49561066-49561085 | None:intergenic | 20.0% |
| !!! | GCATTGAAATTATTCATTTT+TGG | - | chr5_1:49561630-49561649 | Msa0734800:intron | 20.0% |
| ! | GAATCTAAGAGAGAAAATTT+AGG | - | chr5_1:49555536-49555555 | Msa0734800:CDS | 25.0% |
| ! | CGATAAATAACGAAACATAT+AGG | + | chr5_1:49555842-49555861 | None:intergenic | 25.0% |
| !!! | CTTGTCTTATTTTTTGAACT+TGG | + | chr5_1:49555950-49555969 | None:intergenic | 25.0% |
| ! | GTTCAAAAAATAAGACAAGT+TGG | - | chr5_1:49555951-49555970 | Msa0734800:CDS | 25.0% |
| !! | AGAATTTTTGTTCTTAGACT+TGG | - | chr5_1:49556003-49556022 | Msa0734800:CDS | 25.0% |
| !! | GAATTTTTGTTCTTAGACTT+GGG | - | chr5_1:49556004-49556023 | Msa0734800:CDS | 25.0% |
| !!! | CTAACATGATTTTAGTTCAA+AGG | + | chr5_1:49556539-49556558 | None:intergenic | 25.0% |
| ! | TATTCTTAAATTTGTGTCCT+TGG | + | chr5_1:49556579-49556598 | None:intergenic | 25.0% |
| !! | TATTTAAGATTGGATGCTAA+TGG | + | chr5_1:49556712-49556731 | None:intergenic | 25.0% |
| !! | TATTGGTGACTATTTAAGAT+TGG | + | chr5_1:49556722-49556741 | None:intergenic | 25.0% |
| ! | TCTTAAATAGTCACCAATAT+AGG | - | chr5_1:49556723-49556742 | Msa0734800:intron | 25.0% |
| ! | GAAGAATCATATATTATCGA+AGG | - | chr5_1:49557570-49557589 | Msa0734800:intron | 25.0% |
| !! | AAAGAATTTCATTGAGTTGT+CGG | + | chr5_1:49557722-49557741 | None:intergenic | 25.0% |
| !! | CAACTCAATGAAATTCTTTT+CGG | - | chr5_1:49557723-49557742 | Msa0734800:intron | 25.0% |
| ! | CAACTAGTAAGTGTTTATAT+GGG | + | chr5_1:49558079-49558098 | None:intergenic | 25.0% |
| ! | CATATAAACACTTACTAGTT+GGG | - | chr5_1:49558078-49558097 | Msa0734800:intron | 25.0% |
| ! | ATATAAACACTTACTAGTTG+GGG | - | chr5_1:49558079-49558098 | Msa0734800:intron | 25.0% |
| ! | TTAATTCTAGTGAGGAAAAT+TGG | + | chr5_1:49558172-49558191 | None:intergenic | 25.0% |
| !!! | ATTTTATTCCAAAAGCACTT+AGG | - | chr5_1:49558273-49558292 | Msa0734800:intron | 25.0% |
| ! | AAATACAGTAAGGCTAAATT+AGG | - | chr5_1:49558389-49558408 | Msa0734800:intron | 25.0% |
| ! | ATTATGAAAAGTTTGTCTCA+TGG | - | chr5_1:49558444-49558463 | Msa0734800:intron | 25.0% |
| ! | TAGATTAAGTCAAACGTATT+TGG | + | chr5_1:49558689-49558708 | None:intergenic | 25.0% |
| ! | ATTCATTCTCAAAACACATT+GGG | + | chr5_1:49558720-49558739 | None:intergenic | 25.0% |
| ! | AATTCATTCTCAAAACACAT+TGG | + | chr5_1:49558721-49558740 | None:intergenic | 25.0% |
| ! | ATGTTAGATAAATGAGAACT+TGG | - | chr5_1:49559373-49559392 | Msa0734800:intron | 25.0% |
| ! | TATGATAATATGCAAAGTGT+GGG | - | chr5_1:49559633-49559652 | Msa0734800:intron | 25.0% |
| ! | GGACGTAAAAAAAAAAAACA+AGG | - | chr5_1:49559672-49559691 | Msa0734800:intron | 25.0% |
| !!! | AAGGGCACAATTTTTTTAAA+GGG | + | chr5_1:49559889-49559908 | None:intergenic | 25.0% |
| ! | TAAAAATTAACTCAGCACAT+AGG | + | chr5_1:49560461-49560480 | None:intergenic | 25.0% |
| !! | ATGTGCTGAGTTAATTTTTA+AGG | - | chr5_1:49560461-49560480 | Msa0734800:intron | 25.0% |
| !!! | TTATTTTCTGTCTTTAGGAT+GGG | - | chr5_1:49560675-49560694 | Msa0734800:intron | 25.0% |
| ! | TATATACTAGAATGAACATG+TGG | - | chr5_1:49560993-49561012 | Msa0734800:intron | 25.0% |
| ! | GTAAGAATTAATTTCACAGA+TGG | + | chr5_1:49561137-49561156 | None:intergenic | 25.0% |
| ! | CACATATTCTATTCCAAATT+TGG | - | chr5_1:49561175-49561194 | Msa0734800:intron | 25.0% |
| !! | GATCTTCTATATTTTCTTCT+TGG | - | chr5_1:49561579-49561598 | Msa0734800:intron | 25.0% |
| ! | AAATTCAGTGGTTCTTAATA+TGG | - | chr5_1:49561746-49561765 | Msa0734800:intron | 25.0% |
| ! | AAATTCAAAGTCCATTCAAA+TGG | - | chr5_1:49561848-49561867 | Msa0734800:intron | 25.0% |
| ! | AAAACTTAAACACTCACAAT+CGG | - | chr5_1:49561887-49561906 | Msa0734800:intron | 25.0% |
| GGAATTACCTGTAACAAATT+TGG | + | chr5_1:49555485-49555504 | None:intergenic | 30.0% | |
| ATTCCTTGAGTTATAGAACA+AGG | - | chr5_1:49555500-49555519 | Msa0734800:CDS | 30.0% | |
| CTCTCTTAGATTCTATAATG+AGG | + | chr5_1:49555529-49555548 | None:intergenic | 30.0% | |
| AGTAATCTAAGGGATATTCT+CGG | - | chr5_1:49555644-49555663 | Msa0734800:CDS | 30.0% | |
| CCTATGAATATGTATTCATC+GGG | + | chr5_1:49555869-49555888 | None:intergenic | 30.0% | |
| GCCTATGAATATGTATTCAT+CGG | + | chr5_1:49555870-49555889 | None:intergenic | 30.0% | |
| ! | TTATTGATGACTGTGAACTT+TGG | + | chr5_1:49556094-49556113 | None:intergenic | 30.0% |
| CACACAACTAATAACATAGA+AGG | - | chr5_1:49556347-49556366 | Msa0734800:intron | 30.0% | |
| AATTTGTGTCCTTGGTTAAT+TGG | + | chr5_1:49556571-49556590 | None:intergenic | 30.0% | |
| TTGACATTAGAAGCCATATT+CGG | + | chr5_1:49556819-49556838 | None:intergenic | 30.0% | |
| ATAATATCAACATCGCTCTT+CGG | - | chr5_1:49556839-49556858 | Msa0734800:intron | 30.0% | |
| AGTTGTCCCTAAATACATTA+AGG | + | chr5_1:49556944-49556963 | None:intergenic | 30.0% | |
| ACCTCAATATGTAACTTCTT+CGG | - | chr5_1:49556966-49556985 | Msa0734800:intron | 30.0% | |
| !! | CGTCTTAAAATCGTTGTTTT+CGG | - | chr5_1:49557008-49557027 | Msa0734800:CDS | 30.0% |
| AGAATTACACCCTCAAAATA+TGG | - | chr5_1:49557240-49557259 | Msa0734800:intron | 30.0% | |
| CGAAACCGTTCAAATTAATA+TGG | - | chr5_1:49557312-49557331 | Msa0734800:intron | 30.0% | |
| !!! | ATGTTTTGGAGAAGTTAGAA+TGG | + | chr5_1:49557390-49557409 | None:intergenic | 30.0% |
| ACTTCTCCAAAACATCAATA+TGG | - | chr5_1:49557395-49557414 | Msa0734800:intron | 30.0% | |
| ! | GTAGTACCATATTGATGTTT+TGG | + | chr5_1:49557404-49557423 | None:intergenic | 30.0% |
| TTCTATTTAAGGAGAAATGG+TGG | + | chr5_1:49557448-49557467 | None:intergenic | 30.0% | |
| AGATCATTCTTTAATTCCGA+CGG | - | chr5_1:49557496-49557515 | Msa0734800:intron | 30.0% | |
| ! | AAGAATTTCATTGAGTTGTC+GGG | + | chr5_1:49557721-49557740 | None:intergenic | 30.0% |
| TTACAAACTCTCCCTATAAA+AGG | + | chr5_1:49557776-49557795 | None:intergenic | 30.0% | |
| AGAGTTTGTAACAAAAAACG+AGG | - | chr5_1:49557785-49557804 | Msa0734800:intron | 30.0% | |
| GAGTTTGTAACAAAAAACGA+GGG | - | chr5_1:49557786-49557805 | Msa0734800:intron | 30.0% | |
| !!! | AACGCGTTTTGTTTCTTAAT+TGG | - | chr5_1:49557842-49557861 | Msa0734800:intron | 30.0% |
| CCAACTAGTAAGTGTTTATA+TGG | + | chr5_1:49558080-49558099 | None:intergenic | 30.0% | |
| CCATATAAACACTTACTAGT+TGG | - | chr5_1:49558077-49558096 | Msa0734800:intron | 30.0% | |
| AACACTAGTTAATTCTAGTG+AGG | + | chr5_1:49558180-49558199 | None:intergenic | 30.0% | |
| ! | TATGGAGTTATGTTGACTAT+TGG | + | chr5_1:49558203-49558222 | None:intergenic | 30.0% |
| CTCATTCTTTCTATATATGG+TGG | - | chr5_1:49558225-49558244 | Msa0734800:intron | 30.0% | |
| TAAATATAAGGCTAGACAAC+GGG | + | chr5_1:49558318-49558337 | None:intergenic | 30.0% | |
| GTAAATATAAGGCTAGACAA+CGG | + | chr5_1:49558319-49558338 | None:intergenic | 30.0% | |
| AGGTGGTTACTGTAAATATA+AGG | + | chr5_1:49558330-49558349 | None:intergenic | 30.0% | |
| GAGTAGTCTTTCTTTACTTT+GGG | + | chr5_1:49558484-49558503 | None:intergenic | 30.0% | |
| TGAGTAGTCTTTCTTTACTT+TGG | + | chr5_1:49558485-49558504 | None:intergenic | 30.0% | |
| GTCTCTTATATATTCCTCTT+TGG | - | chr5_1:49558611-49558630 | Msa0734800:intron | 30.0% | |
| !! | ATATTCCTCTTTGGAATTAG+TGG | - | chr5_1:49558620-49558639 | Msa0734800:intron | 30.0% |
| !! | TAGAAAAGGGTACTAATTTG+TGG | + | chr5_1:49559018-49559037 | None:intergenic | 30.0% |
| TGAGAAGATTCTACTCATTT+GGG | + | chr5_1:49559047-49559066 | None:intergenic | 30.0% | |
| ATGAGAAGATTCTACTCATT+TGG | + | chr5_1:49559048-49559067 | None:intergenic | 30.0% | |
| !! | AAAAGTACTCACAACAGTAA+TGG | + | chr5_1:49559297-49559316 | None:intergenic | 30.0% |
| GTATGATAATATGCAAAGTG+TGG | - | chr5_1:49559632-49559651 | Msa0734800:intron | 30.0% | |
| ATGATAATATGCAAAGTGTG+GGG | - | chr5_1:49559634-49559653 | Msa0734800:intron | 30.0% | |
| !!! | CAAGGGCACAATTTTTTTAA+AGG | + | chr5_1:49559890-49559909 | None:intergenic | 30.0% |
| !!! | AAAATTTTTTTTGGTGGGGT+GGG | + | chr5_1:49560395-49560414 | None:intergenic | 30.0% |
| !!! | AAAAATTTTTTTTGGTGGGG+TGG | + | chr5_1:49560396-49560415 | None:intergenic | 30.0% |
| CCAGAAAAAATTGTTTGCTT+GGG | + | chr5_1:49560576-49560595 | None:intergenic | 30.0% | |
| !!! | TGTCCTTATTTTCTGTCTTT+AGG | - | chr5_1:49560670-49560689 | Msa0734800:intron | 30.0% |
| CATCCTAAAGACAGAAAATA+AGG | + | chr5_1:49560676-49560695 | None:intergenic | 30.0% | |
| !! | CTTATTTTCTGTCTTTAGGA+TGG | - | chr5_1:49560674-49560693 | Msa0734800:intron | 30.0% |
| !!! | TATTTTCTGTCTTTAGGATG+GGG | - | chr5_1:49560676-49560695 | Msa0734800:intron | 30.0% |
| TTCTATTCCAAATTTGGAGA+TGG | - | chr5_1:49561181-49561200 | Msa0734800:intron | 30.0% | |
| !!! | TGTTAGTTTTATTTTCCGCA+AGG | - | chr5_1:49561358-49561377 | Msa0734800:intron | 30.0% |
| !!! | TTTTATTTTCCGCAAGGATA+TGG | - | chr5_1:49561364-49561383 | Msa0734800:intron | 30.0% |
| !! | TCATACAACATTTGCTGTAT+TGG | - | chr5_1:49561416-49561435 | Msa0734800:intron | 30.0% |
| ! | TTTTCTCTAGCATCTATTGA+AGG | + | chr5_1:49561699-49561718 | None:intergenic | 30.0% |
| TAATATGGATTCTCTACAAC+TGG | - | chr5_1:49561761-49561780 | Msa0734800:intron | 30.0% | |
| !! | CTAGTACTAATTTTGGTAGT+AGG | - | chr5_1:49561784-49561803 | Msa0734800:intron | 30.0% |
| !! | TACTAATTTTGGTAGTAGGT+TGG | - | chr5_1:49561788-49561807 | Msa0734800:intron | 30.0% |
| ! | AAAGTCCATTCAAATGGTTT+TGG | - | chr5_1:49561854-49561873 | Msa0734800:intron | 30.0% |
| !! | GAGTGTTTAAGTTTTCTTAC+AGG | + | chr5_1:49561882-49561901 | None:intergenic | 30.0% |
| !! | TAACATTTGTTGTTTCCTCT+AGG | + | chr5_1:49561968-49561987 | None:intergenic | 30.0% |
| AGAGGAAACAACAAATGTTA+TGG | - | chr5_1:49561968-49561987 | Msa0734800:CDS | 30.0% | |
| GAAAAAATTGTTCTCAAACC+CGG | + | chr5_1:49562000-49562019 | None:intergenic | 30.0% | |
| !! | GTAAGCACCAAATTTGTTAC+AGG | - | chr5_1:49555475-49555494 | Msa0734800:CDS | 35.0% |
| ACAAACAGAATTGGCATTTG+TGG | - | chr5_1:49555703-49555722 | Msa0734800:CDS | 35.0% | |
| CCCGATGAATACATATTCAT+AGG | - | chr5_1:49555866-49555885 | Msa0734800:CDS | 35.0% | |
| TCTGGACTATATTTAGATCC+TGG | + | chr5_1:49555922-49555941 | None:intergenic | 35.0% | |
| ! | TTTTTGAACTTGGGATTGTC+TGG | + | chr5_1:49555940-49555959 | None:intergenic | 35.0% |
| !! | TCAAAGGGAGTGCTAAAATT+CGG | + | chr5_1:49556523-49556542 | None:intergenic | 35.0% |
| TTCCTTCAACCAATTAACCA+AGG | - | chr5_1:49556559-49556578 | Msa0734800:intron | 35.0% | |
| ! | TTTCTGAAGATGGAATTGCT+TGG | + | chr5_1:49556681-49556700 | None:intergenic | 35.0% |
| !! | CAATATAGGATTTGCTGCAA+GGG | - | chr5_1:49556737-49556756 | Msa0734800:intron | 35.0% |
| ACCGAAGAAGTTACATATTG+AGG | + | chr5_1:49556970-49556989 | None:intergenic | 35.0% | |
| CTTCGGTAGATGATAGAATT+TGG | + | chr5_1:49557060-49557079 | None:intergenic | 35.0% | |
| ACTCAACCTAGTAACAACTT+CGG | + | chr5_1:49557077-49557096 | None:intergenic | 35.0% | |
| TTAATCGAACAGTTGTAGCT+GGG | + | chr5_1:49557194-49557213 | None:intergenic | 35.0% | |
| ATTAATCGAACAGTTGTAGC+TGG | + | chr5_1:49557195-49557214 | None:intergenic | 35.0% | |
| !! | ACGATTGAGCCATATTTTGA+GGG | + | chr5_1:49557252-49557271 | None:intergenic | 35.0% |
| ! | AACGATTGAGCCATATTTTG+AGG | + | chr5_1:49557253-49557272 | None:intergenic | 35.0% |
| !! | TTTTGGAGAAGTTAGAATGG+TGG | + | chr5_1:49557387-49557406 | None:intergenic | 35.0% |
| GATCATTCTTTAATTCCGAC+GGG | - | chr5_1:49557497-49557516 | Msa0734800:intron | 35.0% | |
| GGGACATTAGTATTACGAAA+GGG | - | chr5_1:49557517-49557536 | Msa0734800:intron | 35.0% | |
| GGACATTAGTATTACGAAAG+GGG | - | chr5_1:49557518-49557537 | Msa0734800:intron | 35.0% | |
| GACTATGAACTTAAGACCAA+GGG | - | chr5_1:49557593-49557612 | Msa0734800:intron | 35.0% | |
| AAGAACACTCTTAATACCGA+AGG | - | chr5_1:49557627-49557646 | Msa0734800:intron | 35.0% | |
| AGAACACTCTTAATACCGAA+GGG | - | chr5_1:49557628-49557647 | Msa0734800:intron | 35.0% | |
| TTAATACCGAAGGGACAAAA+AGG | - | chr5_1:49557637-49557656 | Msa0734800:intron | 35.0% | |
| TAACAAAAAACGAGGGACTT+GGG | - | chr5_1:49557793-49557812 | Msa0734800:intron | 35.0% | |
| AAACAAAACGCGTTTGCTTA+AGG | + | chr5_1:49557836-49557855 | None:intergenic | 35.0% | |
| TGGATATATCCAGAAGTTTC+TGG | - | chr5_1:49557862-49557881 | Msa0734800:intron | 35.0% | |
| AAAGCATATCCAGAAACTTC+TGG | + | chr5_1:49557874-49557893 | None:intergenic | 35.0% | |
| !! | GAAGTTTCTGGATATGCTTT+TGG | - | chr5_1:49557874-49557893 | Msa0734800:intron | 35.0% |
| ! | TTCTGGATATGCTTTTGGAT+CGG | - | chr5_1:49557879-49557898 | Msa0734800:intron | 35.0% |
| TAAAAATGTCCCACATTGGA+GGG | + | chr5_1:49558108-49558127 | None:intergenic | 35.0% | |
| TTAAAAATGTCCCACATTGG+AGG | + | chr5_1:49558109-49558128 | None:intergenic | 35.0% | |
| GACTTAAAAATGTCCCACAT+TGG | + | chr5_1:49558112-49558131 | None:intergenic | 35.0% | |
| CTATGAAAGAACTAGTGTGT+CGG | + | chr5_1:49558138-49558157 | None:intergenic | 35.0% | |
| TCTTTCTATATATGGTGGCT+CGG | - | chr5_1:49558230-49558249 | Msa0734800:intron | 35.0% | |
| !! | CTTTCTTTACTTTGGGATCA+TGG | + | chr5_1:49558477-49558496 | None:intergenic | 35.0% |
| TAACATAATCCAACGAGCAA+GGG | + | chr5_1:49558586-49558605 | None:intergenic | 35.0% | |
| TTAACATAATCCAACGAGCA+AGG | + | chr5_1:49558587-49558606 | None:intergenic | 35.0% | |
| GCTATGTTTACATTTAGACG+AGG | + | chr5_1:49558799-49558818 | None:intergenic | 35.0% | |
| TCAAATCCTAGATTGATCTG+TGG | - | chr5_1:49558819-49558838 | Msa0734800:intron | 35.0% | |
| GTTCATTAGACGATTGCATT+AGG | - | chr5_1:49558896-49558915 | Msa0734800:intron | 35.0% | |
| !! | AAAAGGGTACTAATTTGTGG+CGG | + | chr5_1:49559015-49559034 | None:intergenic | 35.0% |
| !! | ATTAGTACCCTTTTCTAGAG+AGG | - | chr5_1:49559021-49559040 | Msa0734800:intron | 35.0% |
| AAGTCAGTATATGAGCAAGA+AGG | + | chr5_1:49559190-49559209 | None:intergenic | 35.0% | |
| !! | CAACAGTAATGGATAGTTGA+CGG | + | chr5_1:49559286-49559305 | None:intergenic | 35.0% |
| GAGCAAACACAACATTTATC+CGG | + | chr5_1:49559325-49559344 | None:intergenic | 35.0% | |
| CATAGCTTAAATTCCTTACG+TGG | + | chr5_1:49559356-49559375 | None:intergenic | 35.0% | |
| GAGTAGACCATGATGATAAT+CGG | + | chr5_1:49559497-49559516 | None:intergenic | 35.0% | |
| AAAGTCTAATATCGACCCTA+CGG | + | chr5_1:49559774-49559793 | None:intergenic | 35.0% | |
| ! | GTCGATATTAGACTTTTCCT+GGG | - | chr5_1:49559778-49559797 | Msa0734800:intron | 35.0% |
| TCTTGGAACAATACTAAGCA+AGG | + | chr5_1:49560129-49560148 | None:intergenic | 35.0% | |
| GCTTAGTATTGTTCCAAGAA+AGG | - | chr5_1:49560130-49560149 | Msa0734800:intron | 35.0% | |
| GAAACCATACACAAAGAAGA+AGG | + | chr5_1:49560195-49560214 | None:intergenic | 35.0% | |
| GAAGTTAAGGCTATAACGTT+TGG | + | chr5_1:49560238-49560257 | None:intergenic | 35.0% | |
| AAAAGACAAATAGAAGGTGG+TGG | + | chr5_1:49560307-49560326 | None:intergenic | 35.0% | |
| CCTAAAAGACAAATAGAAGG+TGG | + | chr5_1:49560310-49560329 | None:intergenic | 35.0% | |
| ! | CCACCTTCTATTTGTCTTTT+AGG | - | chr5_1:49560307-49560326 | Msa0734800:intron | 35.0% |
| ! | CCTTCTATTTGTCTTTTAGG+CGG | - | chr5_1:49560310-49560329 | Msa0734800:intron | 35.0% |
| !!! | CCCAAGCAAACAATTTTTTC+TGG | - | chr5_1:49560573-49560592 | Msa0734800:intron | 35.0% |
| GCCAGAAAAAATTGTTTGCT+TGG | + | chr5_1:49560577-49560596 | None:intergenic | 35.0% | |
| ATGTCATGTGCATGACATAT+GGG | + | chr5_1:49560641-49560660 | None:intergenic | 35.0% | |
| GACAGAAAATAAGGACAACA+TGG | + | chr5_1:49560667-49560686 | None:intergenic | 35.0% | |
| !!! | ATTTTCTGTCTTTAGGATGG+GGG | - | chr5_1:49560677-49560696 | Msa0734800:intron | 35.0% |
| AATATTGGACCATCAAAGAG+AGG | + | chr5_1:49560715-49560734 | None:intergenic | 35.0% | |
| ! | ATTTTCCACGAAAATACGTG+TGG | - | chr5_1:49561033-49561052 | Msa0734800:intron | 35.0% |
| TCTTCCTTCAACTATCTCTT+TGG | - | chr5_1:49561279-49561298 | Msa0734800:intron | 35.0% | |
| GTAAAGAGTTATCACCAACA+TGG | + | chr5_1:49561313-49561332 | None:intergenic | 35.0% | |
| CTATTGAAGGAAAGGATGAA+CGG | + | chr5_1:49561686-49561705 | None:intergenic | 35.0% | |
| TCTAGCATCTATTGAAGGAA+AGG | + | chr5_1:49561694-49561713 | None:intergenic | 35.0% | |
| ATTCCAAGATGGAAATTCAG+TGG | - | chr5_1:49561734-49561753 | Msa0734800:intron | 35.0% | |
| ! | CAACTGGCTAGTACTAATTT+TGG | - | chr5_1:49561777-49561796 | Msa0734800:intron | 35.0% |
| AAACAACAAATGTTATGGCG+AGG | - | chr5_1:49561973-49561992 | Msa0734800:CDS | 35.0% | |
| AACAACAAATGTTATGGCGA+GGG | - | chr5_1:49561974-49561993 | Msa0734800:CDS | 35.0% | |
| ATGTGTACAACAATAGTCGT+AGG | - | chr5_1:49562021-49562040 | Msa0734800:CDS | 35.0% | |
| CCTCCTTGTTCTATAACTCA+AGG | + | chr5_1:49555506-49555525 | None:intergenic | 40.0% | |
| CCTTGAGTTATAGAACAAGG+AGG | - | chr5_1:49555503-49555522 | Msa0734800:CDS | 40.0% | |
| TTGTATAACCCTTACAGCAC+TGG | - | chr5_1:49555602-49555621 | Msa0734800:CDS | 40.0% | |
| ACTAGTGAGTTCAACTCTCT+TGG | - | chr5_1:49555893-49555912 | Msa0734800:CDS | 40.0% | |
| CTAGTGAGTTCAACTCTCTT+GGG | - | chr5_1:49555894-49555913 | Msa0734800:CDS | 40.0% | |
| TAGTGAGTTCAACTCTCTTG+GGG | - | chr5_1:49555895-49555914 | Msa0734800:CDS | 40.0% | |
| !! | TCTTTTTCCACAAGAGTGCA+TGG | - | chr5_1:49556404-49556423 | Msa0734800:intron | 40.0% |
| GTCCTTGGTTAATTGGTTGA+AGG | + | chr5_1:49556564-49556583 | None:intergenic | 40.0% | |
| !! | CATTCGGTTGTCACTTTAAG+TGG | + | chr5_1:49556654-49556673 | None:intergenic | 40.0% |
| GGAATTGCTTGGCATTCATT+CGG | + | chr5_1:49556670-49556689 | None:intergenic | 40.0% | |
| ! | GGACAAACGATTTCTGAAGA+TGG | + | chr5_1:49556691-49556710 | None:intergenic | 40.0% |
| CCTTGCAGCAAATCCTATAT+TGG | + | chr5_1:49556739-49556758 | None:intergenic | 40.0% | |
| !! | CCAATATAGGATTTGCTGCA+AGG | - | chr5_1:49556736-49556755 | Msa0734800:intron | 40.0% |
| TAAACAAGCCATGCCGAATA+TGG | - | chr5_1:49556803-49556822 | Msa0734800:intron | 40.0% | |
| ATTAGAAGCCATATTCGGCA+TGG | + | chr5_1:49556814-49556833 | None:intergenic | 40.0% | |
| CATCTACCGAAGTTGTTACT+AGG | - | chr5_1:49557068-49557087 | Msa0734800:CDS | 40.0% | |
| !!! | GCTCTCTTTAAGACGTTTTG+TGG | - | chr5_1:49557109-49557128 | Msa0734800:CDS | 40.0% |
| AGTCTACCTTGCACAACTTT+GGG | + | chr5_1:49557140-49557159 | None:intergenic | 40.0% | |
| TAGTCTACCTTGCACAACTT+TGG | + | chr5_1:49557141-49557160 | None:intergenic | 40.0% | |
| TTGAACGGTTTCGAATAGAG+CGG | + | chr5_1:49557305-49557324 | None:intergenic | 40.0% | |
| GTCTCAGCACCATAATAGAA+TGG | + | chr5_1:49557346-49557365 | None:intergenic | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | + | chr5_1:49557368-49557387 | None:intergenic | 40.0% | |
| GTACTACGACCACTCAAATA+TGG | - | chr5_1:49557417-49557436 | Msa0734800:intron | 40.0% | |
| GTGGTATCACCATATTTGAG+TGG | + | chr5_1:49557429-49557448 | None:intergenic | 40.0% | |
| TCGTAATACTAATGTCCCGT+CGG | + | chr5_1:49557515-49557534 | None:intergenic | 40.0% | |
| CGGGACATTAGTATTACGAA+AGG | - | chr5_1:49557516-49557535 | Msa0734800:intron | 40.0% | |
| GGACTATGAACTTAAGACCA+AGG | - | chr5_1:49557592-49557611 | Msa0734800:intron | 40.0% | |
| AACTTAAGACCAAGGGACTA+TGG | - | chr5_1:49557600-49557619 | Msa0734800:intron | 40.0% | |
| TTCTTAAGACCATAGTCCCT+TGG | + | chr5_1:49557612-49557631 | None:intergenic | 40.0% | |
| ! | TCTACTCCTTTTTGTCCCTT+CGG | + | chr5_1:49557646-49557665 | None:intergenic | 40.0% |
| AGAAACTCGCTATCGCAAAT+CGG | - | chr5_1:49557672-49557691 | Msa0734800:intron | 40.0% | |
| !! | TTTTCGGTGTGAAGAATGAG+TGG | - | chr5_1:49557739-49557758 | Msa0734800:intron | 40.0% |
| ! | TTTCGGTGTGAAGAATGAGT+GGG | - | chr5_1:49557740-49557759 | Msa0734800:intron | 40.0% |
| ! | GGCGAACTTCTCCTTTTATA+GGG | - | chr5_1:49557762-49557781 | Msa0734800:intron | 40.0% |
| GTAACAAAAAACGAGGGACT+TGG | - | chr5_1:49557792-49557811 | Msa0734800:intron | 40.0% | |
| AACAAAAAACGAGGGACTTG+GGG | - | chr5_1:49557794-49557813 | Msa0734800:intron | 40.0% | |
| ! | TCTGGATATGCTTTTGGATC+GGG | - | chr5_1:49557880-49557899 | Msa0734800:intron | 40.0% |
| GTTCACCCGTTCACAAAATT+GGG | - | chr5_1:49558020-49558039 | Msa0734800:intron | 40.0% | |
| ! | GCGAATAACCTAAGTGCTTT+TGG | + | chr5_1:49558284-49558303 | None:intergenic | 40.0% |
| AAATAGTAGGCAATGAGCGA+AGG | + | chr5_1:49558365-49558384 | None:intergenic | 40.0% | |
| TAGCACCACTAATTCCAAAG+AGG | + | chr5_1:49558628-49558647 | None:intergenic | 40.0% | |
| TGAACTCCACAGATCAATCT+AGG | + | chr5_1:49558828-49558847 | None:intergenic | 40.0% | |
| !! | AAAGGGTACTAATTTGTGGC+GGG | + | chr5_1:49559014-49559033 | None:intergenic | 40.0% |
| ! | ATTTGGGCCTCTCTAGAAAA+GGG | + | chr5_1:49559031-49559050 | None:intergenic | 40.0% |
| ! | GGTTATGAGGCATTATGCAT+GGG | + | chr5_1:49559093-49559112 | None:intergenic | 40.0% |
| CATGCATAATGCCTCATAAC+CGG | - | chr5_1:49559092-49559111 | Msa0734800:intron | 40.0% | |
| CATCAATGCTTAGTTTCAGC+CGG | + | chr5_1:49559114-49559133 | None:intergenic | 40.0% | |
| CAGTATATGAGCAAGAAGGA+AGG | + | chr5_1:49559186-49559205 | None:intergenic | 40.0% | |
| ! | GAGAAAGAGAGTGTACTTGT+AGG | + | chr5_1:49559226-49559245 | None:intergenic | 40.0% |
| ! | AATTCCTTACGTGGACTGTT+CGG | + | chr5_1:49559347-49559366 | None:intergenic | 40.0% |
| GTATTTGCAAGGACGAGTAA+GGG | + | chr5_1:49559453-49559472 | None:intergenic | 40.0% | |
| TGTATTTGCAAGGACGAGTA+AGG | + | chr5_1:49559454-49559473 | None:intergenic | 40.0% | |
| AAGGGGTTGTTGTATTTGCA+AGG | + | chr5_1:49559464-49559483 | None:intergenic | 40.0% | |
| TAGACCATGATGATAATCGG+CGG | + | chr5_1:49559494-49559513 | None:intergenic | 40.0% | |
| AATATGCAAAGTGTGGGGTT+TGG | - | chr5_1:49559639-49559658 | Msa0734800:intron | 40.0% | |
| AGATGCAGTAGCATCATTGA+CGG | - | chr5_1:49559739-49559758 | Msa0734800:intron | 40.0% | |
| ! | GGTCGATATTAGACTTTTCC+TGG | - | chr5_1:49559777-49559796 | Msa0734800:intron | 40.0% |
| ATGGTTGAAAAGTCTAACCC+AGG | + | chr5_1:49559798-49559817 | None:intergenic | 40.0% | |
| ! | GTTATAGCCTTAACTTCCCA+TGG | - | chr5_1:49560241-49560260 | Msa0734800:intron | 40.0% |
| CCGCCTAAAAGACAAATAGA+AGG | + | chr5_1:49560313-49560332 | None:intergenic | 40.0% | |
| CTCATAACAGGTCACTAACT+TGG | + | chr5_1:49560612-49560631 | None:intergenic | 40.0% | |
| CATGTCATGTGCATGACATA+TGG | + | chr5_1:49560642-49560661 | None:intergenic | 40.0% | |
| !!! | TTTTCTGTCTTTAGGATGGG+GGG | - | chr5_1:49560678-49560697 | Msa0734800:intron | 40.0% |
| ! | AGATTCCACACGTATTTTCG+TGG | + | chr5_1:49561041-49561060 | None:intergenic | 40.0% |
| TCTCACATCCTAAGTAGAAG+AGG | - | chr5_1:49561094-49561113 | Msa0734800:intron | 40.0% | |
| GAGACTAACCTCTTCTACTT+AGG | + | chr5_1:49561105-49561124 | None:intergenic | 40.0% | |
| GCATCATCCATCTCCAAATT+TGG | + | chr5_1:49561191-49561210 | None:intergenic | 40.0% | |
| TCCTTCAACTATCTCTTTGG+AGG | - | chr5_1:49561282-49561301 | Msa0734800:intron | 40.0% | |
| TCCTCCAAAGAGATAGTTGA+AGG | + | chr5_1:49561286-49561305 | None:intergenic | 40.0% | |
| ! | TCAACTATCTCTTTGGAGGA+TGG | - | chr5_1:49561286-49561305 | Msa0734800:intron | 40.0% |
| TCAAGGAACGAAACTCAATG+CGG | - | chr5_1:49561546-49561565 | Msa0734800:intron | 40.0% | |
| ! | CAGTGTTCTGAATTCCAAGA+TGG | - | chr5_1:49561723-49561742 | Msa0734800:intron | 40.0% |
| GAACCACTGAATTTCCATCT+TGG | + | chr5_1:49561740-49561759 | None:intergenic | 40.0% | |
| AGGCTCCAAAACCATTTGAA+TGG | + | chr5_1:49561862-49561881 | None:intergenic | 40.0% | |
| AACGCGTCAAACATGAAGTT+GGG | + | chr5_1:49561924-49561943 | None:intergenic | 40.0% | |
| AGAAACCATCAAAGACCTAG+AGG | - | chr5_1:49561950-49561969 | Msa0734800:CDS | 40.0% | |
| TGTTTCCTCTAGGTCTTTGA+TGG | + | chr5_1:49561958-49561977 | None:intergenic | 40.0% | |
| !! | ATTGTTGACTCTCTCAGCGT+TGG | - | chr5_1:49555422-49555441 | Msa0734800:CDS | 45.0% |
| CTTACATCGATCCTTCTCCA+CGG | + | chr5_1:49555460-49555479 | None:intergenic | 45.0% | |
| CTTTGGATCCAGTGCTGTAA+GGG | + | chr5_1:49555613-49555632 | None:intergenic | 45.0% | |
| TAAGGGATATTCTCGGTTGC+AGG | - | chr5_1:49555651-49555670 | Msa0734800:CDS | 45.0% | |
| TTGTGTACCATGCACTCTTG+TGG | + | chr5_1:49556414-49556433 | None:intergenic | 45.0% | |
| !!! | TAGCTGGGCTTGTTTTATCC+TGG | + | chr5_1:49557179-49557198 | None:intergenic | 45.0% |
| TTGATCGAAGCCACTCGATA+CGG | - | chr5_1:49557272-49557291 | Msa0734800:intron | 45.0% | |
| GTGCTGAGACCACTCAAATA+TGG | - | chr5_1:49557356-49557375 | Msa0734800:intron | 45.0% | |
| ! | TTCGGTGTGAAGAATGAGTG+GGG | - | chr5_1:49557741-49557760 | Msa0734800:intron | 45.0% |
| ! | GGGCGAACTTCTCCTTTTAT+AGG | - | chr5_1:49557761-49557780 | Msa0734800:intron | 45.0% |
| ! | GATATGCTTTTGGATCGGGT+CGG | - | chr5_1:49557884-49557903 | Msa0734800:intron | 45.0% |
| TTTGTTACGCGTAGCGCTTA+CGG | - | chr5_1:49557922-49557941 | Msa0734800:intron | 45.0% | |
| CGTTCACCCGTTCACAAAAT+TGG | - | chr5_1:49558019-49558038 | Msa0734800:intron | 45.0% | |
| ! | GGGTACCCAATTTTGTGAAC+GGG | + | chr5_1:49558028-49558047 | None:intergenic | 45.0% |
| !! | GGGGTACCCAATTTTGTGAA+CGG | + | chr5_1:49558029-49558048 | None:intergenic | 45.0% |
| TCACAAAATTGGGTACCCCA+AGG | - | chr5_1:49558030-49558049 | Msa0734800:intron | 45.0% | |
| CACAAAATTGGGTACCCCAA+GGG | - | chr5_1:49558031-49558050 | Msa0734800:intron | 45.0% | |
| ATGGGAAAAGTGACCTCCAA+GGG | + | chr5_1:49558061-49558080 | None:intergenic | 45.0% | |
| TATGGGAAAAGTGACCTCCA+AGG | + | chr5_1:49558062-49558081 | None:intergenic | 45.0% | |
| CATAAATCTCCCTTGCTCGT+TGG | - | chr5_1:49558574-49558593 | Msa0734800:intron | 45.0% | |
| ! | ATGAATTAGCTTCCCTCGCT+CGG | - | chr5_1:49558734-49558753 | Msa0734800:intron | 45.0% |
| !! | GTACTAATTTGTGGCGGGTT+GGG | + | chr5_1:49559009-49559028 | None:intergenic | 45.0% |
| ! | CATTTGGGCCTCTCTAGAAA+AGG | + | chr5_1:49559032-49559051 | None:intergenic | 45.0% |
| GAATCTTCTCATCCTCACCT+CGG | - | chr5_1:49559056-49559075 | Msa0734800:intron | 45.0% | |
| ! | CGGTTATGAGGCATTATGCA+TGG | + | chr5_1:49559094-49559113 | None:intergenic | 45.0% |
| CTTAGTTTCAGCCGGTTATG+AGG | + | chr5_1:49559106-49559125 | None:intergenic | 45.0% | |
| !! | CGGCTGAAACTAAGCATTGA+TGG | - | chr5_1:49559112-49559131 | Msa0734800:intron | 45.0% |
| AGAGTCGTTGGGTAATGACA+GGG | + | chr5_1:49559151-49559170 | None:intergenic | 45.0% | |
| AAGAGTCGTTGGGTAATGAC+AGG | + | chr5_1:49559152-49559171 | None:intergenic | 45.0% | |
| TTACCCAACGACTCTTTCCA+CGG | - | chr5_1:49559156-49559175 | Msa0734800:intron | 45.0% | |
| TAACCGTGGAAAGAGTCGTT+GGG | + | chr5_1:49559162-49559181 | None:intergenic | 45.0% | |
| TTAACCGTGGAAAGAGTCGT+TGG | + | chr5_1:49559163-49559182 | None:intergenic | 45.0% | |
| !! | TAGTTGACGGAGGTGCTTTA+AGG | + | chr5_1:49559273-49559292 | None:intergenic | 45.0% |
| !! | CAGTAATGGATAGTTGACGG+AGG | + | chr5_1:49559283-49559302 | None:intergenic | 45.0% |
| ATAATCGGCGGCTATCGTAA+GGG | + | chr5_1:49559482-49559501 | None:intergenic | 45.0% | |
| ! | ATAGCCGCCGATTATCATCA+TGG | - | chr5_1:49559487-49559506 | Msa0734800:intron | 45.0% |
| TGAGCTTAACTCAGCTGGTA+GGG | - | chr5_1:49559604-49559623 | Msa0734800:intron | 45.0% | |
| AAAACAAGGACTTGCGTGTG+TGG | - | chr5_1:49559686-49559705 | Msa0734800:intron | 45.0% | |
| GGCACCTTCTTCTTTGTGTA+TGG | - | chr5_1:49560188-49560207 | Msa0734800:intron | 45.0% | |
| GGCAAGCAAGCTAGGATAAA+AGG | + | chr5_1:49560217-49560236 | None:intergenic | 45.0% | |
| TAACGTTTGGCAAGCAAGCT+AGG | + | chr5_1:49560225-49560244 | None:intergenic | 45.0% | |
| ! | ATAGCCTTAACTTCCCATGG+TGG | - | chr5_1:49560244-49560263 | Msa0734800:intron | 45.0% |
| ! | AGACAAATAGAAGGTGGTGG+TGG | + | chr5_1:49560304-49560323 | None:intergenic | 45.0% |
| TCACTAACTTGGCATAGGTG+CGG | + | chr5_1:49560601-49560620 | None:intergenic | 45.0% | |
| ACAGGTCACTAACTTGGCAT+AGG | + | chr5_1:49560606-49560625 | None:intergenic | 45.0% | |
| TATGGGAGAGGTCTCATAAC+AGG | + | chr5_1:49560624-49560643 | None:intergenic | 45.0% | |
| ATGTGCATGACATATGGGAG+AGG | + | chr5_1:49560636-49560655 | None:intergenic | 45.0% | |
| !! | TCTTTAGGATGGGGGGTATA+GGG | - | chr5_1:49560685-49560704 | Msa0734800:intron | 45.0% |
| TAGGGCTATCCTCTCTTTGA+TGG | - | chr5_1:49560703-49560722 | Msa0734800:intron | 45.0% | |
| ! | CCAAAGGTGTGGAGATTTGT+GGG | - | chr5_1:49561213-49561232 | Msa0734800:intron | 45.0% |
| ! | TGAGTGTTGCCATATCCTTG+CGG | + | chr5_1:49561376-49561395 | None:intergenic | 45.0% |
| GGCAACACTCAAGAAGTCAT+TGG | - | chr5_1:49561385-49561404 | Msa0734800:intron | 45.0% | |
| TGCATAATACGCCAGATGCA+TGG | - | chr5_1:49561478-49561497 | Msa0734800:intron | 45.0% | |
| GAAATGAGACTCCATGCATC+TGG | + | chr5_1:49561492-49561511 | None:intergenic | 45.0% | |
| ! | ATGTGCATCCTTTGCTGTCA+CGG | - | chr5_1:49561512-49561531 | Msa0734800:intron | 45.0% |
| AAAACTCGAGACTCGTGTGA+AGG | - | chr5_1:49561812-49561831 | Msa0734800:intron | 45.0% | |
| ACACTCACAATCGGTGATAG+AGG | - | chr5_1:49561896-49561915 | Msa0734800:CDS | 45.0% | |
| CAACGCGTCAAACATGAAGT+TGG | + | chr5_1:49561925-49561944 | None:intergenic | 45.0% | |
| !!! | TTTTAATAATTTTCTATTTA+AGG | + | chr5_1:49557459-49557478 | None:intergenic | 5.0% |
| !!! | GTATTTTTTAAATTAATAAT+TGG | - | chr5_1:49559714-49559733 | Msa0734800:intron | 5.0% |
| !!! | CATTATATTATTTTTTTTAA+GGG | + | chr5_1:49559975-49559994 | None:intergenic | 5.0% |
| TTCTGGGTGATGTCAGGTGT+GGG | - | chr5_1:49555345-49555364 | Msa0734800:CDS | 50.0% | |
| !! | AGGTGTGGGTTGGATTGTGA+GGG | - | chr5_1:49555359-49555378 | Msa0734800:CDS | 50.0% |
| GGTTGGATTGTGAGGGTGAT+GGG | - | chr5_1:49555366-49555385 | Msa0734800:CDS | 50.0% | |
| !! | TGATGGGTTGGTTGAGGATG+AGG | - | chr5_1:49555382-49555401 | Msa0734800:CDS | 50.0% |
| !! | TTGACTCTCTCAGCGTTGGT+AGG | - | chr5_1:49555426-49555445 | Msa0734800:CDS | 50.0% |
| CCTTTGGATCCAGTGCTGTA+AGG | + | chr5_1:49555614-49555633 | None:intergenic | 50.0% | |
| ! | CCTTACAGCACTGGATCCAA+AGG | - | chr5_1:49555611-49555630 | Msa0734800:CDS | 50.0% |
| ! | TACTAGGTTGAGTCACGACC+AGG | - | chr5_1:49557084-49557103 | Msa0734800:CDS | 50.0% |
| ACGTCTTAAAGAGAGCGACC+TGG | + | chr5_1:49557105-49557124 | None:intergenic | 50.0% | |
| GCACTACCCAAAGTTGTGCA+AGG | - | chr5_1:49557131-49557150 | Msa0734800:CDS | 50.0% | |
| !!! | GGCTTGTTTTATCCTGGAGG+CGG | + | chr5_1:49557173-49557192 | None:intergenic | 50.0% |
| !!! | CTGGGCTTGTTTTATCCTGG+AGG | + | chr5_1:49557176-49557195 | None:intergenic | 50.0% |
| AACTCGCTATCGCAAATCGG+AGG | - | chr5_1:49557675-49557694 | Msa0734800:intron | 50.0% | |
| ACTCGCTATCGCAAATCGGA+GGG | - | chr5_1:49557676-49557695 | Msa0734800:intron | 50.0% | |
| ! | TAAGGCTAGACAACGGGTTC+AGG | + | chr5_1:49558312-49558331 | None:intergenic | 50.0% |
| CAGTAACCACCTTCACCTCT+CGG | - | chr5_1:49558338-49558357 | Msa0734800:intron | 50.0% | |
| TTACTATAGCTGCCGAGCGA+GGG | + | chr5_1:49558749-49558768 | None:intergenic | 50.0% | |
| ATTACTATAGCTGCCGAGCG+AGG | + | chr5_1:49558750-49558769 | None:intergenic | 50.0% | |
| CTAACCTTCCTTCGACTGTG+AGG | - | chr5_1:49558773-49558792 | Msa0734800:intron | 50.0% | |
| !! | GGTACTAATTTGTGGCGGGT+TGG | + | chr5_1:49559010-49559029 | None:intergenic | 50.0% |
| GCAAGAAGGAAGGTTAACCG+TGG | + | chr5_1:49559176-49559195 | None:intergenic | 50.0% | |
| GATGTGGTGGTCGCAATACA+GGG | + | chr5_1:49559251-49559270 | None:intergenic | 50.0% | |
| !! | GAGGTGCTTTAAGGATGTGG+TGG | + | chr5_1:49559264-49559283 | None:intergenic | 50.0% |
| !! | ACGGAGGTGCTTTAAGGATG+TGG | + | chr5_1:49559267-49559286 | None:intergenic | 50.0% |
| TAATCGGCGGCTATCGTAAG+GGG | + | chr5_1:49559481-49559500 | None:intergenic | 50.0% | |
| GATAATCGGCGGCTATCGTA+AGG | + | chr5_1:49559483-49559502 | None:intergenic | 50.0% | |
| GTGAGCTTAACTCAGCTGGT+AGG | - | chr5_1:49559603-49559622 | Msa0734800:intron | 50.0% | |
| ! | GTGGGGTTTGGTTGAAACTC+CGG | - | chr5_1:49559651-49559670 | Msa0734800:intron | 50.0% |
| TCCAAGAAAGGCGAAGTGTG+TGG | - | chr5_1:49560142-49560161 | Msa0734800:intron | 50.0% | |
| ACCACACACTTCGCCTTTCT+TGG | + | chr5_1:49560146-49560165 | None:intergenic | 50.0% | |
| !! | CAAATAGAAGGTGGTGGTGG+TGG | + | chr5_1:49560301-49560320 | None:intergenic | 50.0% |
| !! | GTCTTTAGGATGGGGGGTAT+AGG | - | chr5_1:49560684-49560703 | Msa0734800:intron | 50.0% |
| GAGATGGATGATGCAGCCAA+AGG | - | chr5_1:49561197-49561216 | Msa0734800:intron | 50.0% | |
| ! | GCCAAAGGTGTGGAGATTTG+TGG | - | chr5_1:49561212-49561231 | Msa0734800:intron | 50.0% |
| CCCACAAATCTCCACACCTT+TGG | + | chr5_1:49561216-49561235 | None:intergenic | 50.0% | |
| !! | GGATTTGCTGCTGTTGTTGC+TGG | - | chr5_1:49561234-49561253 | Msa0734800:intron | 50.0% |
| ! | CTTTGGAGGATGGACCATGT+TGG | - | chr5_1:49561296-49561315 | Msa0734800:intron | 50.0% |
| !! | TCACGGCGCTTAGTTTGTCA+AGG | - | chr5_1:49561529-49561548 | Msa0734800:intron | 50.0% |
| ACAAATGTTATGGCGAGGGC+CGG | - | chr5_1:49561978-49561997 | Msa0734800:CDS | 50.0% | |
| !! | GGTCAGTTCTGGGTGATGTC+AGG | - | chr5_1:49555339-49555358 | Msa0734800:CDS | 55.0% |
| ! | GTTCTGGGTGATGTCAGGTG+TGG | - | chr5_1:49555344-49555363 | Msa0734800:CDS | 55.0% |
| !! | CAGGTGTGGGTTGGATTGTG+AGG | - | chr5_1:49555358-49555377 | Msa0734800:CDS | 55.0% |
| GGGTTGGATTGTGAGGGTGA+TGG | - | chr5_1:49555365-49555384 | Msa0734800:CDS | 55.0% | |
| !! | GGATTGTGAGGGTGATGGGT+TGG | - | chr5_1:49555370-49555389 | Msa0734800:CDS | 55.0% |
| !! | TGAGGGTGATGGGTTGGTTG+AGG | - | chr5_1:49555376-49555395 | Msa0734800:CDS | 55.0% |
| !! | CTCTCTCAGCGTTGGTAGGA+CGG | - | chr5_1:49555430-49555449 | Msa0734800:CDS | 55.0% |
| GTTCAACTCTCTTGGGGTCC+AGG | - | chr5_1:49555901-49555920 | Msa0734800:CDS | 55.0% | |
| CGGTTACGTACCGTATCGAG+TGG | + | chr5_1:49557285-49557304 | None:intergenic | 55.0% | |
| TTGGGGTGACCCTCCAATGT+GGG | - | chr5_1:49558096-49558115 | Msa0734800:intron | 55.0% | |
| GCATTATGCATGGGCTCGAG+AGG | + | chr5_1:49559084-49559103 | None:intergenic | 55.0% | |
| GGATGTGGTGGTCGCAATAC+AGG | + | chr5_1:49559252-49559271 | None:intergenic | 55.0% | |
| TGCTCCGAACAGTCCACGTA+AGG | - | chr5_1:49559340-49559359 | Msa0734800:intron | 55.0% | |
| CCAGCTGAGTTAAGCTCACG+AGG | + | chr5_1:49559602-49559621 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAACTCAGC+TGG | - | chr5_1:49559599-49559618 | Msa0734800:intron | 55.0% | |
| GCCTTAACTTCCCATGGTGG+CGG | - | chr5_1:49560247-49560266 | Msa0734800:intron | 55.0% | |
| CCACTGCACATAGGCGAGTA+AGG | + | chr5_1:49560340-49560359 | None:intergenic | 55.0% | |
| CCTTACTCGCCTATGTGCAG+TGG | - | chr5_1:49560337-49560356 | Msa0734800:intron | 55.0% | |
| !!! | TTTTTTGGTGGGGTGGGCCA+TGG | + | chr5_1:49560389-49560408 | None:intergenic | 55.0% |
| GGATGATGCAGCCAAAGGTG+TGG | - | chr5_1:49561202-49561221 | Msa0734800:intron | 55.0% | |
| ! | ACTAAGCGCCGTGACAGCAA+AGG | + | chr5_1:49561523-49561542 | None:intergenic | 55.0% |
| CAAATGTTATGGCGAGGGCC+GGG | - | chr5_1:49561979-49561998 | Msa0734800:CDS | 55.0% | |
| !! | ATGGCGGTGCTGGTCAGTTC+TGG | - | chr5_1:49555328-49555347 | Msa0734800:CDS | 60.0% |
| !! | TGGCGGTGCTGGTCAGTTCT+GGG | - | chr5_1:49555329-49555348 | Msa0734800:CDS | 60.0% |
| GGGTGATGTCAGGTGTGGGT+TGG | - | chr5_1:49555349-49555368 | Msa0734800:CDS | 60.0% | |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | + | chr5_1:49557168-49557187 | None:intergenic | 60.0% |
| ! | ACCTCCAAGGGTGTGCCCTT+GGG | + | chr5_1:49558049-49558068 | None:intergenic | 60.0% |
| GTTGGGGTGACCCTCCAATG+TGG | - | chr5_1:49558095-49558114 | Msa0734800:intron | 60.0% | |
| GAAGGACCGAGAGGTGAAGG+TGG | + | chr5_1:49558347-49558366 | None:intergenic | 60.0% | |
| AGCGAAGGACCGAGAGGTGA+AGG | + | chr5_1:49558350-49558369 | None:intergenic | 60.0% | |
| GCAATGAGCGAAGGACCGAG+AGG | + | chr5_1:49558356-49558375 | None:intergenic | 60.0% | |
| GAGGCCTCACAGTCGAAGGA+AGG | + | chr5_1:49558780-49558799 | None:intergenic | 60.0% | |
| AGACGAGGCCTCACAGTCGA+AGG | + | chr5_1:49558784-49558803 | None:intergenic | 60.0% | |
| GTGGTGGTCGCAATACAGGG+AGG | + | chr5_1:49559248-49559267 | None:intergenic | 60.0% | |
| TATCGACCCTACGGCTGCGT+GGG | + | chr5_1:49559765-49559784 | None:intergenic | 60.0% | |
| ATATCGACCCTACGGCTGCG+TGG | + | chr5_1:49559766-49559785 | None:intergenic | 60.0% | |
| GCCGCCACCATGGGAAGTTA+AGG | + | chr5_1:49560251-49560270 | None:intergenic | 60.0% | |
| GGGAGTTAAGCCGCCACCAT+GGG | + | chr5_1:49560260-49560279 | None:intergenic | 60.0% | |
| TGGTTGTGGTGGTCGTGCGA+GGG | + | chr5_1:49560281-49560300 | None:intergenic | 60.0% | |
| !! | GAAGGTGGTGGTGGTGGTTG+TGG | + | chr5_1:49560295-49560314 | None:intergenic | 60.0% |
| TCGCCTATGTGCAGTGGCAG+AGG | - | chr5_1:49560343-49560362 | Msa0734800:intron | 60.0% | |
| CGCCTATGTGCAGTGGCAGA+GGG | - | chr5_1:49560344-49560363 | Msa0734800:intron | 60.0% | |
| GCCTATGTGCAGTGGCAGAG+GGG | - | chr5_1:49560345-49560364 | Msa0734800:intron | 60.0% | |
| TGCAGTGGCAGAGGGGCTAT+AGG | - | chr5_1:49560352-49560371 | Msa0734800:intron | 60.0% | |
| GCAGTGGCAGAGGGGCTATA+GGG | - | chr5_1:49560353-49560372 | Msa0734800:intron | 60.0% | |
| AGGGGCTATAGGGCCAAGGT+GGG | - | chr5_1:49560363-49560382 | Msa0734800:intron | 60.0% | |
| TATAGGGCCAAGGTGGGCCA+TGG | - | chr5_1:49560369-49560388 | Msa0734800:intron | 60.0% | |
| !! | CGTGTGAAGGCACTCGAGCA+CGG | - | chr5_1:49561825-49561844 | Msa0734800:intron | 60.0% |
| ! | GTTGGTAGGACGGCTAGCCG+TGG | - | chr5_1:49555440-49555459 | Msa0734800:CDS | 65.0% |
| ! | AGGACGGCTAGCCGTGGAGA+AGG | - | chr5_1:49555446-49555465 | Msa0734800:CDS | 65.0% |
| CTATCAACCACGCCGCCTCC+AGG | - | chr5_1:49557158-49557177 | Msa0734800:CDS | 65.0% | |
| ! | GTACCCCAAGGGCACACCCT+TGG | - | chr5_1:49558042-49558061 | Msa0734800:intron | 65.0% |
| ! | CCTCCAAGGGTGTGCCCTTG+GGG | + | chr5_1:49558048-49558067 | None:intergenic | 65.0% |
| ! | GACCTCCAAGGGTGTGCCCT+TGG | + | chr5_1:49558050-49558069 | None:intergenic | 65.0% |
| GCTCGAGAGGATCCGAGGTG+AGG | + | chr5_1:49559071-49559090 | None:intergenic | 65.0% | |
| CATGGGCTCGAGAGGATCCG+AGG | + | chr5_1:49559076-49559095 | None:intergenic | 65.0% | |
| GGGGAGTTAAGCCGCCACCA+TGG | + | chr5_1:49560261-49560280 | None:intergenic | 65.0% | |
| GGTTGTGGTGGTCGTGCGAG+GGG | + | chr5_1:49560280-49560299 | None:intergenic | 65.0% | |
| GTGGTTGTGGTGGTCGTGCG+AGG | + | chr5_1:49560282-49560301 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGTGGTTGTGG+TGG | + | chr5_1:49560292-49560311 | None:intergenic | 65.0% |
| GCCCCTCTGCCACTGCACAT+AGG | + | chr5_1:49560349-49560368 | None:intergenic | 65.0% | |
| GCAGAGGGGCTATAGGGCCA+AGG | - | chr5_1:49560359-49560378 | Msa0734800:intron | 65.0% | |
| GAGGGGCTATAGGGCCAAGG+TGG | - | chr5_1:49560362-49560381 | Msa0734800:intron | 65.0% | |
| ! | CCCCAAGGGCACACCCTTGG+AGG | - | chr5_1:49558045-49558064 | Msa0734800:intron | 70.0% |
| TTGACGGCCCACGCAGCCGT+AGG | - | chr5_1:49559755-49559774 | Msa0734800:intron | 70.0% | |
| TGACGGCCCACGCAGCCGTA+GGG | - | chr5_1:49559756-49559775 | Msa0734800:intron | 70.0% | |
| GGGTGGGCCATGGCCCACCT+TGG | + | chr5_1:49560379-49560398 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 49555320 | 49562046 | 49555320 | ID=Msa0734800;Name=Msa0734800 |
| chr5_1 | mRNA | 49555320 | 49562046 | 49555320 | ID=Msa0734800-mRNA-1;Parent=Msa0734800;Name=Msa0734800-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.33|1|1|3|0|394 |
| chr5_1 | exon | 49561892 | 49562046 | 49561892 | ID=Msa0734800-mRNA-1:exon:14040;Parent=Msa0734800-mRNA-1 |
| chr5_1 | exon | 49556986 | 49557181 | 49556986 | ID=Msa0734800-mRNA-1:exon:14039;Parent=Msa0734800-mRNA-1 |
| chr5_1 | exon | 49555320 | 49556153 | 49555320 | ID=Msa0734800-mRNA-1:exon:14038;Parent=Msa0734800-mRNA-1 |
| chr5_1 | CDS | 49561892 | 49562046 | 49561892 | ID=Msa0734800-mRNA-1:cds;Parent=Msa0734800-mRNA-1 |
| chr5_1 | CDS | 49556986 | 49557181 | 49556986 | ID=Msa0734800-mRNA-1:cds;Parent=Msa0734800-mRNA-1 |
| chr5_1 | CDS | 49555320 | 49556153 | 49555320 | ID=Msa0734800-mRNA-1:cds;Parent=Msa0734800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
