Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813950 | AES98853.1 | 89.032 | 310 | 16 | 2 | 67 | 358 | 15 | 324 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813950 | G7JZS7 | 89.032 | 310 | 16 | 2 | 67 | 358 | 15 | 324 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0734800 | Msa0813950 | 0.850199 | 1.981396e-60 | -8.615850e-47 |
| Msa0776720 | Msa0813950 | 0.808873 | 2.500829e-50 | -8.615850e-47 |
| Msa0813950 | Msa0817860 | 0.809489 | 1.844815e-50 | -8.615850e-47 |
| Msa0813950 | Msa0854620 | 0.833673 | 4.659035e-56 | -8.615850e-47 |
| Msa0813950 | Msa1198090 | 0.821378 | 4.167751e-53 | -8.615850e-47 |
| Msa0389030 | Msa0813950 | 0.820385 | 7.052079e-53 | -8.615850e-47 |
| Msa0329550 | Msa0813950 | 0.809467 | 1.865001e-50 | -8.615850e-47 |
| Msa0351230 | Msa0813950 | 0.804280 | 2.330627e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813950 | MtrunA17_Chr5g0431801 | 93.893 | 262 | 15 | 1 | 67 | 327 | 15 | 276 | 4.17e-180 | 501 |
| Msa0813950 | MtrunA17_Chr5g0431851 | 91.221 | 262 | 22 | 1 | 66 | 327 | 14 | 274 | 1.53e-167 | 469 |
| Msa0813950 | MtrunA17_Chr5g0431821 | 73.427 | 286 | 55 | 2 | 59 | 325 | 9 | 292 | 1.11e-142 | 411 |
| Msa0813950 | MtrunA17_Chr5g0431811 | 51.558 | 353 | 101 | 6 | 67 | 351 | 15 | 365 | 9.98e-101 | 320 |
| Msa0813950 | MtrunA17_Chr5g0431761 | 47.734 | 331 | 131 | 8 | 59 | 351 | 9 | 335 | 3.74e-93 | 290 |
| Msa0813950 | MtrunA17_Chr5g0431741 | 49.240 | 329 | 126 | 7 | 59 | 350 | 9 | 333 | 1.46e-91 | 288 |
| Msa0813950 | MtrunA17_Chr5g0432041 | 53.462 | 260 | 116 | 3 | 66 | 325 | 15 | 269 | 3.67e-85 | 271 |
| Msa0813950 | MtrunA17_Chr5g0432091 | 53.383 | 266 | 114 | 6 | 68 | 325 | 16 | 279 | 3.28e-77 | 251 |
| Msa0813950 | MtrunA17_Chr5g0432181 | 51.587 | 252 | 100 | 5 | 66 | 297 | 14 | 263 | 1.65e-76 | 239 |
| Msa0813950 | MtrunA17_Chr5g0431981 | 49.430 | 263 | 117 | 6 | 66 | 325 | 14 | 263 | 1.24e-72 | 230 |
| Msa0813950 | MtrunA17_Chr5g0431991 | 47.170 | 265 | 135 | 4 | 61 | 325 | 9 | 268 | 2.85e-71 | 228 |
| Msa0813950 | MtrunA17_Chr3g0104851 | 43.382 | 272 | 109 | 6 | 66 | 325 | 28 | 266 | 3.35e-63 | 213 |
| Msa0813950 | MtrunA17_Chr5g0444661 | 63.158 | 152 | 54 | 2 | 66 | 217 | 15 | 164 | 6.47e-61 | 202 |
| Msa0813950 | MtrunA17_Chr5g0431751 | 43.929 | 280 | 114 | 8 | 59 | 335 | 9 | 248 | 9.21e-59 | 192 |
| Msa0813950 | MtrunA17_Chr7g0231451 | 51.471 | 204 | 84 | 7 | 57 | 254 | 6 | 200 | 4.48e-55 | 182 |
| Msa0813950 | MtrunA17_Chr5g0431891 | 64.384 | 146 | 33 | 1 | 199 | 325 | 1 | 146 | 2.01e-50 | 170 |
| Msa0813950 | MtrunA17_Chr5g0431921 | 47.236 | 199 | 99 | 5 | 66 | 261 | 14 | 209 | 1.10e-49 | 167 |
| Msa0813950 | MtrunA17_Chr5g0432051 | 55.128 | 156 | 68 | 2 | 69 | 224 | 28 | 181 | 1.91e-45 | 156 |
| Msa0813950 | MtrunA17_Chr5g0432031 | 50.000 | 162 | 78 | 3 | 64 | 224 | 23 | 182 | 1.51e-43 | 151 |
| Msa0813950 | MtrunA17_Chr5g0431951 | 50.794 | 126 | 56 | 3 | 57 | 182 | 23 | 142 | 8.19e-34 | 122 |
| Msa0813950 | MtrunA17_Chr6g0482231 | 36.932 | 176 | 110 | 1 | 70 | 245 | 109 | 283 | 1.68e-27 | 111 |
| Msa0813950 | MtrunA17_Chr6g0482191 | 40.506 | 158 | 93 | 1 | 69 | 226 | 477 | 633 | 2.73e-27 | 113 |
| Msa0813950 | MtrunA17_Chr5g0431961 | 62.338 | 77 | 28 | 1 | 66 | 142 | 15 | 90 | 8.18e-25 | 96.7 |
| Msa0813950 | MtrunA17_Chr5g0444671 | 38.750 | 160 | 73 | 4 | 70 | 229 | 15 | 149 | 2.00e-21 | 90.1 |
| Msa0813950 | MtrunA17_Chr5g0431901 | 41.096 | 146 | 45 | 3 | 203 | 325 | 1 | 128 | 2.76e-20 | 86.3 |
| Msa0813950 | MtrunA17_Chr6g0482151 | 38.406 | 138 | 83 | 2 | 79 | 216 | 4 | 139 | 6.32e-20 | 85.9 |
| Msa0813950 | MtrunA17_Chr5g0431911 | 33.696 | 184 | 81 | 4 | 67 | 249 | 15 | 158 | 2.70e-14 | 70.1 |
| Msa0813950 | MtrunA17_Chr6g0480951 | 43.023 | 86 | 46 | 2 | 70 | 153 | 226 | 310 | 5.32e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 82 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCAGTGGTTCTTAATA+TGG | 0.196083 | 5_3:+45518553 | Msa0813950:CDS |
| GGATTTGCTGCTGTTGTTGC+TGG | 0.254444 | 5_3:+45518041 | Msa0813950:CDS |
| TCTTCCTTCAACTATCTCTT+TGG | 0.283998 | 5_3:+45518086 | Msa0813950:CDS |
| TGTTTCCTCTAGGTCTTTGA+TGG | 0.289475 | 5_3:-45518762 | None:intergenic |
| AAAGTCCATTCAAATGGTTT+TGG | 0.296790 | 5_3:+45518661 | Msa0813950:CDS |
| GGTGGTGGTGGTTGCGGTTG+TGG | 0.303244 | 5_3:-45517045 | None:intergenic |
| TCATACAACATTTGTTGTAT+TGG | 0.324138 | 5_3:+45518223 | Msa0813950:CDS |
| GGTGGTTGCGGTTGTGGTGG+TGG | 0.367955 | 5_3:-45517039 | None:intergenic |
| CAGTAGTGGTTGAGAATCAT+TGG | 0.375942 | 5_3:-45518967 | None:intergenic |
| TGCAGTGGCGGAGGGGCTAT+AGG | 0.381603 | 5_3:+45517111 | Msa0813950:CDS |
| CGGTTGTGGTGGTGGTGTGA+GGG | 0.388129 | 5_3:-45517031 | None:intergenic |
| GAAGTTAAGGCTAGAACGTT+TGG | 0.389791 | 5_3:-45516988 | None:intergenic |
| CGCCTATGTGCAGTGGCGGA+GGG | 0.391661 | 5_3:+45517103 | Msa0813950:CDS |
| TAATATGGATTCTCTACAAC+TGG | 0.399665 | 5_3:+45518568 | Msa0813950:CDS |
| TCCTTCAACTATCTCTTTGG+AGG | 0.401422 | 5_3:+45518089 | Msa0813950:CDS |
| ATTGTGAACATCCTCAATCT+TGG | 0.412248 | 5_3:-45518895 | None:intergenic |
| GCGGTTGTGGTGGTGGTGTG+AGG | 0.419645 | 5_3:-45517032 | None:intergenic |
| TCGCCTATGTGCAGTGGCGG+AGG | 0.419931 | 5_3:+45517102 | Msa0813950:CDS |
| AATGGTCCCTTCTTCGTGTA+TGG | 0.420502 | 5_3:+45516941 | None:intergenic |
| ATGTGCATCCTTTGCTGTCA+CGG | 0.423858 | 5_3:+45518319 | Msa0813950:CDS |
| CAACTGGCTAGTACTAATAT+TGG | 0.425336 | 5_3:+45518584 | Msa0813950:CDS |
| GCAGTGGCGGAGGGGCTATA+GGG | 0.426584 | 5_3:+45517112 | Msa0813950:CDS |
| TTGTGAACATCCTCAATCTT+GGG | 0.437650 | 5_3:-45518894 | None:intergenic |
| AGGCTCCAAAACCATTTGAA+TGG | 0.441764 | 5_3:-45518666 | None:intergenic |
| AGAGGAAACAACAAATGTTA+TGG | 0.441798 | 5_3:+45518775 | Msa0813950:CDS |
| CCCACAAATCTCCACACCTT+TGG | 0.444313 | 5_3:-45518020 | None:intergenic |
| GAACCACTGAATTTCCATCT+TGG | 0.449916 | 5_3:-45518544 | None:intergenic |
| CCAAAGGTGTGGAGATTTGT+GGG | 0.449986 | 5_3:+45518020 | Msa0813950:CDS |
| GTTCTAGCCTTAACTTCCTA+TGG | 0.451637 | 5_3:+45516994 | Msa0813950:CDS |
| AAATTCAAAGTCCATTCAAA+TGG | 0.453874 | 5_3:+45518655 | Msa0813950:CDS |
| CAACGCGTCAAACATGAAGT+TGG | 0.460762 | 5_3:-45518729 | None:intergenic |
| GCCGCCACCATAGGAAGTTA+AGG | 0.463647 | 5_3:-45517001 | None:intergenic |
| CCACTGCACATAGGCGAGTA+AGG | 0.467746 | 5_3:-45517096 | None:intergenic |
| CTAGTACTAATATTGGTAGT+AGG | 0.477743 | 5_3:+45518591 | Msa0813950:CDS |
| GAAATGAGACTCCATGCATC+TGG | 0.481164 | 5_3:-45518296 | None:intergenic |
| TCCTCCAAAGAGATAGTTGA+AGG | 0.485636 | 5_3:-45518090 | None:intergenic |
| ACACTCACAATCGGTGATAG+AGG | 0.488023 | 5_3:+45518703 | Msa0813950:CDS |
| CAAATAGAAGGTGGTGGTGG+TGG | 0.489273 | 5_3:-45517057 | None:intergenic |
| GAACGTTTGGCAAGCAAGCT+AGG | 0.493830 | 5_3:-45516975 | None:intergenic |
| CCGCCTAAAAGACAAATAGA+AGG | 0.493954 | 5_3:-45517069 | None:intergenic |
| AACGCGTCAAACATGAAGTT+GGG | 0.499337 | 5_3:-45518728 | None:intergenic |
| GCCTTAACTTCCTATGGTGG+CGG | 0.500496 | 5_3:+45517000 | Msa0813950:CDS |
| GGTGGTGGTTGCGGTTGTGG+TGG | 0.505805 | 5_3:-45517042 | None:intergenic |
| TCAACTATCTCTTTGGAGGA+TGG | 0.506399 | 5_3:+45518093 | Msa0813950:CDS |
| AATGAAACCATACACGAAGA+AGG | 0.513623 | 5_3:-45516948 | None:intergenic |
| TAACATTTGTTGTTTCCTCT+AGG | 0.514503 | 5_3:-45518772 | None:intergenic |
| TACTAATATTGGTAGTAGGT+TGG | 0.517377 | 5_3:+45518595 | Msa0813950:CDS |
| AAAACTTAAACACTCACAAT+CGG | 0.520932 | 5_3:+45518694 | Msa0813950:CDS |
| GGCAACACTCAAGAAGTCAT+TGG | 0.523682 | 5_3:+45518192 | Msa0813950:CDS |
| TCTAGCATCTATTGAAGGAA+AGG | 0.524621 | 5_3:-45518498 | None:intergenic |
| TGCATAATACGCCAGATGCA+TGG | 0.531259 | 5_3:+45518285 | Msa0813950:CDS |
| ATGAAACCATACACGAAGAA+GGG | 0.544734 | 5_3:-45516947 | None:intergenic |
| GGTTGTGGTGGTGGTGTGAG+GGG | 0.551380 | 5_3:-45517030 | None:intergenic |
| GGGAGTTAAGCCGCCACCAT+AGG | 0.551710 | 5_3:-45517010 | None:intergenic |
| GCCTATGTGCAGTGGCGGAG+GGG | 0.558807 | 5_3:+45517104 | Msa0813950:CDS |
| CAGTGCTCTGAATTCCAAGA+TGG | 0.561368 | 5_3:+45518530 | Msa0813950:CDS |
| AGACAAATAGAAGGTGGTGG+TGG | 0.565305 | 5_3:-45517060 | None:intergenic |
| GCCAAAGGTGTGGAGATTTG+TGG | 0.566628 | 5_3:+45518019 | Msa0813950:intron |
| GTTACCGAAGCCCAAGATTG+AGG | 0.573696 | 5_3:+45518884 | Msa0813950:intron |
| TACTCGCCTATGTGCAGTGG+CGG | 0.578295 | 5_3:+45517099 | Msa0813950:CDS |
| GCGGAGGGGCTATAGGGCCA+AGG | 0.597766 | 5_3:+45517118 | Msa0813950:CDS |
| TCACGGCGCTTAGTTTGTCA+AGG | 0.598752 | 5_3:+45518336 | Msa0813950:CDS |
| CTAGCCTTAACTTCCTATGG+TGG | 0.599665 | 5_3:+45516997 | Msa0813950:CDS |
| ACTAAGCGCCGTGACAGCAA+AGG | 0.610060 | 5_3:-45518327 | None:intergenic |
| AGGATGTTCACAATATGCCA+TGG | 0.611605 | 5_3:+45518904 | Msa0813950:CDS |
| CGTGTGAAGGCACTCGAGCA+CGG | 0.617949 | 5_3:+45518632 | Msa0813950:CDS |
| TGTTCACAATATGCCATGGA+AGG | 0.619723 | 5_3:+45518908 | Msa0813950:CDS |
| TCGTCATCAAGATCCTTCCA+TGG | 0.620665 | 5_3:-45518921 | None:intergenic |
| GCTCGCGATAAAATCAGTAG+TGG | 0.624074 | 5_3:-45518981 | None:intergenic |
| ATTCCAAGATGGAAATTCAG+TGG | 0.625640 | 5_3:+45518541 | Msa0813950:CDS |
| AAAACTCGAGACTCGTGTGA+AGG | 0.633334 | 5_3:+45518619 | Msa0813950:CDS |
| AAAAGACAAATAGAAGGTGG+TGG | 0.635673 | 5_3:-45517063 | None:intergenic |
| CTATTGAAGGAAAGGATGAA+CGG | 0.640738 | 5_3:-45518490 | None:intergenic |
| CCTTACTCGCCTATGTGCAG+TGG | 0.645542 | 5_3:+45517096 | Msa0813950:CDS |
| CTTTGGAGGATGGACCATGT+TGG | 0.645605 | 5_3:+45518103 | Msa0813950:CDS |
| GGATGATGCAGCCAAAGGTG+TGG | 0.649228 | 5_3:+45518009 | Msa0813950:intron |
| GCCCCTCCGCCACTGCACAT+AGG | 0.651836 | 5_3:-45517105 | None:intergenic |
| CCTAAAAGACAAATAGAAGG+TGG | 0.659251 | 5_3:-45517066 | None:intergenic |
| TGAGTGTTGCCATATCCTTG+TGG | 0.692047 | 5_3:-45518180 | None:intergenic |
| AGAAACCATCAAAGACCTAG+AGG | 0.695509 | 5_3:+45518757 | Msa0813950:CDS |
| TCAAGGAACGAAACTCAATG+CGG | 0.732487 | 5_3:+45518353 | Msa0813950:CDS |
| GTAAAGAGTTATCACCAACA+TGG | 0.757087 | 5_3:-45518117 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATACAATTTAATTTTTTGA+TGG | + | chr5_3:45517251-45517270 | Msa0813950:intron | 10.0% |
| !!! | TATATTATAGTTTATTTTTG+TGG | + | chr5_3:45517317-45517336 | Msa0813950:intron | 10.0% |
| !!! | TATACAATTTAATTTTTTGA+TGG | + | chr5_3:45517251-45517270 | Msa0813950:intron | 10.0% |
| !!! | TATATTATAGTTTATTTTTG+TGG | + | chr5_3:45517317-45517336 | Msa0813950:intron | 10.0% |
| !!! | AAAATTATGATTTTTTTGGT+CGG | - | chr5_3:45517159-45517178 | None:intergenic | 15.0% |
| !! | CAATATAACAAATGTAATAT+TGG | - | chr5_3:45517502-45517521 | None:intergenic | 15.0% |
| !!! | TATTACATTTGTTATATTGT+TGG | + | chr5_3:45517503-45517522 | Msa0813950:intron | 15.0% |
| !!! | AAAATTATGATTTTTTTGGT+CGG | - | chr5_3:45517159-45517178 | None:intergenic | 15.0% |
| !! | CAATATAACAAATGTAATAT+TGG | - | chr5_3:45517502-45517521 | None:intergenic | 15.0% |
| !!! | TATTACATTTGTTATATTGT+TGG | + | chr5_3:45517503-45517522 | Msa0813950:intron | 15.0% |
| !!! | AAATTATGATTTTTTTGGTC+GGG | - | chr5_3:45517158-45517177 | None:intergenic | 20.0% |
| !! | TAAAAATTAACTCAACACAT+AGG | - | chr5_3:45517228-45517247 | None:intergenic | 20.0% |
| !!! | ATGTGTTGAGTTAATTTTTA+AGG | + | chr5_3:45517228-45517247 | Msa0813950:intron | 20.0% |
| !!! | TTATTTTTTGTCTTTAGGAT+GGG | + | chr5_3:45517447-45517466 | Msa0813950:intron | 20.0% |
| !!! | GCATTGAAATTATTCATTTT+TGG | + | chr5_3:45518437-45518456 | Msa0813950:CDS | 20.0% |
| !!! | AAATTATGATTTTTTTGGTC+GGG | - | chr5_3:45517158-45517177 | None:intergenic | 20.0% |
| !! | TAAAAATTAACTCAACACAT+AGG | - | chr5_3:45517228-45517247 | None:intergenic | 20.0% |
| !!! | ATGTGTTGAGTTAATTTTTA+AGG | + | chr5_3:45517228-45517247 | Msa0813950:intron | 20.0% |
| !!! | TTATTTTTTGTCTTTAGGAT+GGG | + | chr5_3:45517447-45517466 | Msa0813950:intron | 20.0% |
| !!! | GCATTGAAATTATTCATTTT+TGG | + | chr5_3:45518437-45518456 | Msa0813950:CDS | 20.0% |
| ! | ACAGAAAAAATTGTTTGGAT+GGG | - | chr5_3:45517343-45517362 | None:intergenic | 25.0% |
| !!! | TGTCCTTATTTTTTGTCTTT+AGG | + | chr5_3:45517442-45517461 | Msa0813950:intron | 25.0% |
| ! | CATCCTAAAGACAAAAAATA+AGG | - | chr5_3:45517448-45517467 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGTCTTTAGGA+TGG | + | chr5_3:45517446-45517465 | Msa0813950:intron | 25.0% |
| !!! | TATTTTTTGTCTTTAGGATG+GGG | + | chr5_3:45517448-45517467 | Msa0813950:intron | 25.0% |
| ! | TATATACTAGAATGAACAAG+TGG | + | chr5_3:45517767-45517786 | Msa0813950:intron | 25.0% |
| !! | CTATTTGAATCGAAATTTTG+AGG | - | chr5_3:45517840-45517859 | None:intergenic | 25.0% |
| !! | TATCTCTACTCTTTTACTTA+GGG | - | chr5_3:45517878-45517897 | None:intergenic | 25.0% |
| ! | CACATATTCTATTCCAAATT+TGG | + | chr5_3:45517982-45518001 | Msa0813950:intron | 25.0% |
| !!! | TCATACAACATTTGTTGTAT+TGG | + | chr5_3:45518223-45518242 | Msa0813950:CDS | 25.0% |
| !! | GATCTTCTATATTTTCTTCT+TGG | + | chr5_3:45518386-45518405 | Msa0813950:CDS | 25.0% |
| ! | AAATTCAGTGGTTCTTAATA+TGG | + | chr5_3:45518553-45518572 | Msa0813950:CDS | 25.0% |
| ! | AAATTCAAAGTCCATTCAAA+TGG | + | chr5_3:45518655-45518674 | Msa0813950:CDS | 25.0% |
| ! | AAAACTTAAACACTCACAAT+CGG | + | chr5_3:45518694-45518713 | Msa0813950:CDS | 25.0% |
| !!! | TTGATGACGATATTGAAAAA+TGG | + | chr5_3:45518934-45518953 | Msa0813950:CDS | 25.0% |
| ! | ACAGAAAAAATTGTTTGGAT+GGG | - | chr5_3:45517343-45517362 | None:intergenic | 25.0% |
| !!! | TGTCCTTATTTTTTGTCTTT+AGG | + | chr5_3:45517442-45517461 | Msa0813950:intron | 25.0% |
| ! | CATCCTAAAGACAAAAAATA+AGG | - | chr5_3:45517448-45517467 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGTCTTTAGGA+TGG | + | chr5_3:45517446-45517465 | Msa0813950:intron | 25.0% |
| !!! | TATTTTTTGTCTTTAGGATG+GGG | + | chr5_3:45517448-45517467 | Msa0813950:intron | 25.0% |
| ! | TATATACTAGAATGAACAAG+TGG | + | chr5_3:45517767-45517786 | Msa0813950:intron | 25.0% |
| !! | CTATTTGAATCGAAATTTTG+AGG | - | chr5_3:45517840-45517859 | None:intergenic | 25.0% |
| !! | TATCTCTACTCTTTTACTTA+GGG | - | chr5_3:45517878-45517897 | None:intergenic | 25.0% |
| ! | CACATATTCTATTCCAAATT+TGG | + | chr5_3:45517982-45518001 | Msa0813950:intron | 25.0% |
| !!! | TCATACAACATTTGTTGTAT+TGG | + | chr5_3:45518223-45518242 | Msa0813950:CDS | 25.0% |
| !! | GATCTTCTATATTTTCTTCT+TGG | + | chr5_3:45518386-45518405 | Msa0813950:CDS | 25.0% |
| ! | AAATTCAGTGGTTCTTAATA+TGG | + | chr5_3:45518553-45518572 | Msa0813950:CDS | 25.0% |
| ! | AAATTCAAAGTCCATTCAAA+TGG | + | chr5_3:45518655-45518674 | Msa0813950:CDS | 25.0% |
| ! | AAAACTTAAACACTCACAAT+CGG | + | chr5_3:45518694-45518713 | Msa0813950:CDS | 25.0% |
| !!! | TTGATGACGATATTGAAAAA+TGG | + | chr5_3:45518934-45518953 | Msa0813950:CDS | 25.0% |
| GACAGAAAAAATTGTTTGGA+TGG | - | chr5_3:45517344-45517363 | None:intergenic | 30.0% | |
| TCATAACAGGTCACTAAAAT+TGG | - | chr5_3:45517383-45517402 | None:intergenic | 30.0% | |
| GACAAAAAATAAGGACAACA+TGG | - | chr5_3:45517439-45517458 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTCTTTAGGATGG+GGG | + | chr5_3:45517449-45517468 | Msa0813950:intron | 30.0% |
| ! | CTATCTCTACTCTTTTACTT+AGG | - | chr5_3:45517879-45517898 | None:intergenic | 30.0% |
| TTCTATTCCAAATTTGGAGA+TGG | + | chr5_3:45517988-45518007 | Msa0813950:intron | 30.0% | |
| !!! | TGTTAGTTTTATTTGCCACA+AGG | + | chr5_3:45518165-45518184 | Msa0813950:CDS | 30.0% |
| !! | TTTTATTTGCCACAAGGATA+TGG | + | chr5_3:45518171-45518190 | Msa0813950:CDS | 30.0% |
| ! | TTTTCTCTAGCATCTATTGA+AGG | - | chr5_3:45518506-45518525 | None:intergenic | 30.0% |
| TAATATGGATTCTCTACAAC+TGG | + | chr5_3:45518568-45518587 | Msa0813950:CDS | 30.0% | |
| ! | CTAGTACTAATATTGGTAGT+AGG | + | chr5_3:45518591-45518610 | Msa0813950:CDS | 30.0% |
| ! | TACTAATATTGGTAGTAGGT+TGG | + | chr5_3:45518595-45518614 | Msa0813950:CDS | 30.0% |
| ! | AAAGTCCATTCAAATGGTTT+TGG | + | chr5_3:45518661-45518680 | Msa0813950:CDS | 30.0% |
| !! | GAGTGTTTAAGTTTTCTTAC+AGG | - | chr5_3:45518689-45518708 | None:intergenic | 30.0% |
| !! | TAACATTTGTTGTTTCCTCT+AGG | - | chr5_3:45518775-45518794 | None:intergenic | 30.0% |
| AGAGGAAACAACAAATGTTA+TGG | + | chr5_3:45518775-45518794 | Msa0813950:CDS | 30.0% | |
| AAACAACAAATGTTATGGTG+AGG | + | chr5_3:45518780-45518799 | Msa0813950:intron | 30.0% | |
| AACAACAAATGTTATGGTGA+GGG | + | chr5_3:45518781-45518800 | Msa0813950:intron | 30.0% | |
| GAAAAAATTGTTCTCAAACC+CGG | - | chr5_3:45518807-45518826 | None:intergenic | 30.0% | |
| ATGTGTACAACAATAATCGT+AGG | + | chr5_3:45518828-45518847 | Msa0813950:intron | 30.0% | |
| ! | AAGAGTGCGTATATGATATT+CGG | + | chr5_3:45518861-45518880 | Msa0813950:intron | 30.0% |
| GACAGAAAAAATTGTTTGGA+TGG | - | chr5_3:45517344-45517363 | None:intergenic | 30.0% | |
| TCATAACAGGTCACTAAAAT+TGG | - | chr5_3:45517383-45517402 | None:intergenic | 30.0% | |
| GACAAAAAATAAGGACAACA+TGG | - | chr5_3:45517439-45517458 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTCTTTAGGATGG+GGG | + | chr5_3:45517449-45517468 | Msa0813950:intron | 30.0% |
| ! | CTATCTCTACTCTTTTACTT+AGG | - | chr5_3:45517879-45517898 | None:intergenic | 30.0% |
| TTCTATTCCAAATTTGGAGA+TGG | + | chr5_3:45517988-45518007 | Msa0813950:intron | 30.0% | |
| !!! | TGTTAGTTTTATTTGCCACA+AGG | + | chr5_3:45518165-45518184 | Msa0813950:CDS | 30.0% |
| !! | TTTTATTTGCCACAAGGATA+TGG | + | chr5_3:45518171-45518190 | Msa0813950:CDS | 30.0% |
| ! | TTTTCTCTAGCATCTATTGA+AGG | - | chr5_3:45518506-45518525 | None:intergenic | 30.0% |
| TAATATGGATTCTCTACAAC+TGG | + | chr5_3:45518568-45518587 | Msa0813950:CDS | 30.0% | |
| ! | CTAGTACTAATATTGGTAGT+AGG | + | chr5_3:45518591-45518610 | Msa0813950:CDS | 30.0% |
| ! | TACTAATATTGGTAGTAGGT+TGG | + | chr5_3:45518595-45518614 | Msa0813950:CDS | 30.0% |
| ! | AAAGTCCATTCAAATGGTTT+TGG | + | chr5_3:45518661-45518680 | Msa0813950:CDS | 30.0% |
| !! | GAGTGTTTAAGTTTTCTTAC+AGG | - | chr5_3:45518689-45518708 | None:intergenic | 30.0% |
| !! | TAACATTTGTTGTTTCCTCT+AGG | - | chr5_3:45518775-45518794 | None:intergenic | 30.0% |
| AGAGGAAACAACAAATGTTA+TGG | + | chr5_3:45518775-45518794 | Msa0813950:CDS | 30.0% | |
| AAACAACAAATGTTATGGTG+AGG | + | chr5_3:45518780-45518799 | Msa0813950:intron | 30.0% | |
| AACAACAAATGTTATGGTGA+GGG | + | chr5_3:45518781-45518800 | Msa0813950:intron | 30.0% | |
| GAAAAAATTGTTCTCAAACC+CGG | - | chr5_3:45518807-45518826 | None:intergenic | 30.0% | |
| ATGTGTACAACAATAATCGT+AGG | + | chr5_3:45518828-45518847 | Msa0813950:intron | 30.0% | |
| ! | AAGAGTGCGTATATGATATT+CGG | + | chr5_3:45518861-45518880 | Msa0813950:intron | 30.0% |
| ATGAAACCATACACGAAGAA+GGG | - | chr5_3:45516950-45516969 | None:intergenic | 35.0% | |
| AATGAAACCATACACGAAGA+AGG | - | chr5_3:45516951-45516970 | None:intergenic | 35.0% | |
| AAAAGACAAATAGAAGGTGG+TGG | - | chr5_3:45517066-45517085 | None:intergenic | 35.0% | |
| CCTAAAAGACAAATAGAAGG+TGG | - | chr5_3:45517069-45517088 | None:intergenic | 35.0% | |
| ! | CCACCTTCTATTTGTCTTTT+AGG | + | chr5_3:45517066-45517085 | Msa0813950:CDS | 35.0% |
| ! | CCTTCTATTTGTCTTTTAGG+CGG | + | chr5_3:45517069-45517088 | Msa0813950:CDS | 35.0% |
| !!! | TATGATTTTTTTGGTCGGGT+GGG | - | chr5_3:45517154-45517173 | None:intergenic | 35.0% |
| !!! | TTATGATTTTTTTGGTCGGG+TGG | - | chr5_3:45517155-45517174 | None:intergenic | 35.0% |
| CGGAGACAGAAAAAATTGTT+TGG | - | chr5_3:45517348-45517367 | None:intergenic | 35.0% | |
| AAAATTGGCATAGGCAATGA+CGG | - | chr5_3:45517368-45517387 | None:intergenic | 35.0% | |
| ATGTCATGTGCATGACATAT+GGG | - | chr5_3:45517413-45517432 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTCTTTAGGATGGG+GGG | + | chr5_3:45517450-45517469 | Msa0813950:intron | 35.0% |
| AATATTGGACCATCAAAGAG+AGG | - | chr5_3:45517487-45517506 | None:intergenic | 35.0% | |
| ! | ATTTTCCACGAAAATACGTG+TGG | + | chr5_3:45517807-45517826 | Msa0813950:intron | 35.0% |
| TCTTCCTTCAACTATCTCTT+TGG | + | chr5_3:45518086-45518105 | Msa0813950:CDS | 35.0% | |
| GTAAAGAGTTATCACCAACA+TGG | - | chr5_3:45518120-45518139 | None:intergenic | 35.0% | |
| CTATTGAAGGAAAGGATGAA+CGG | - | chr5_3:45518493-45518512 | None:intergenic | 35.0% | |
| TCTAGCATCTATTGAAGGAA+AGG | - | chr5_3:45518501-45518520 | None:intergenic | 35.0% | |
| ATTCCAAGATGGAAATTCAG+TGG | + | chr5_3:45518541-45518560 | Msa0813950:CDS | 35.0% | |
| CAACTGGCTAGTACTAATAT+TGG | + | chr5_3:45518584-45518603 | Msa0813950:CDS | 35.0% | |
| AGAGTGCGTATATGATATTC+GGG | + | chr5_3:45518862-45518881 | Msa0813950:intron | 35.0% | |
| TTGTGAACATCCTCAATCTT+GGG | - | chr5_3:45518897-45518916 | None:intergenic | 35.0% | |
| ATTGTGAACATCCTCAATCT+TGG | - | chr5_3:45518898-45518917 | None:intergenic | 35.0% | |
| ATGAAACCATACACGAAGAA+GGG | - | chr5_3:45516950-45516969 | None:intergenic | 35.0% | |
| AATGAAACCATACACGAAGA+AGG | - | chr5_3:45516951-45516970 | None:intergenic | 35.0% | |
| AAAAGACAAATAGAAGGTGG+TGG | - | chr5_3:45517066-45517085 | None:intergenic | 35.0% | |
| CCTAAAAGACAAATAGAAGG+TGG | - | chr5_3:45517069-45517088 | None:intergenic | 35.0% | |
| ! | CCACCTTCTATTTGTCTTTT+AGG | + | chr5_3:45517066-45517085 | Msa0813950:CDS | 35.0% |
| ! | CCTTCTATTTGTCTTTTAGG+CGG | + | chr5_3:45517069-45517088 | Msa0813950:CDS | 35.0% |
| !!! | TATGATTTTTTTGGTCGGGT+GGG | - | chr5_3:45517154-45517173 | None:intergenic | 35.0% |
| !!! | TTATGATTTTTTTGGTCGGG+TGG | - | chr5_3:45517155-45517174 | None:intergenic | 35.0% |
| CGGAGACAGAAAAAATTGTT+TGG | - | chr5_3:45517348-45517367 | None:intergenic | 35.0% | |
| AAAATTGGCATAGGCAATGA+CGG | - | chr5_3:45517368-45517387 | None:intergenic | 35.0% | |
| ATGTCATGTGCATGACATAT+GGG | - | chr5_3:45517413-45517432 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTCTTTAGGATGGG+GGG | + | chr5_3:45517450-45517469 | Msa0813950:intron | 35.0% |
| AATATTGGACCATCAAAGAG+AGG | - | chr5_3:45517487-45517506 | None:intergenic | 35.0% | |
| ! | ATTTTCCACGAAAATACGTG+TGG | + | chr5_3:45517807-45517826 | Msa0813950:intron | 35.0% |
| TCTTCCTTCAACTATCTCTT+TGG | + | chr5_3:45518086-45518105 | Msa0813950:CDS | 35.0% | |
| GTAAAGAGTTATCACCAACA+TGG | - | chr5_3:45518120-45518139 | None:intergenic | 35.0% | |
| CTATTGAAGGAAAGGATGAA+CGG | - | chr5_3:45518493-45518512 | None:intergenic | 35.0% | |
| TCTAGCATCTATTGAAGGAA+AGG | - | chr5_3:45518501-45518520 | None:intergenic | 35.0% | |
| ATTCCAAGATGGAAATTCAG+TGG | + | chr5_3:45518541-45518560 | Msa0813950:CDS | 35.0% | |
| CAACTGGCTAGTACTAATAT+TGG | + | chr5_3:45518584-45518603 | Msa0813950:CDS | 35.0% | |
| AGAGTGCGTATATGATATTC+GGG | + | chr5_3:45518862-45518881 | Msa0813950:intron | 35.0% | |
| TTGTGAACATCCTCAATCTT+GGG | - | chr5_3:45518897-45518916 | None:intergenic | 35.0% | |
| ATTGTGAACATCCTCAATCT+TGG | - | chr5_3:45518898-45518917 | None:intergenic | 35.0% | |
| GAAGTTAAGGCTAGAACGTT+TGG | - | chr5_3:45516991-45517010 | None:intergenic | 40.0% | |
| !! | GTTCTAGCCTTAACTTCCTA+TGG | + | chr5_3:45516994-45517013 | Msa0813950:CDS | 40.0% |
| CCGCCTAAAAGACAAATAGA+AGG | - | chr5_3:45517072-45517091 | None:intergenic | 40.0% | |
| CAGGTCACTAAAATTGGCAT+AGG | - | chr5_3:45517377-45517396 | None:intergenic | 40.0% | |
| CATGTCATGTGCATGACATA+TGG | - | chr5_3:45517414-45517433 | None:intergenic | 40.0% | |
| ! | AGATTCCACACGTATTTTCG+TGG | - | chr5_3:45517815-45517834 | None:intergenic | 40.0% |
| GAGACTAAGCTCTTCTACTT+AGG | - | chr5_3:45517912-45517931 | None:intergenic | 40.0% | |
| GCATCATCCATCTCCAAATT+TGG | - | chr5_3:45517998-45518017 | None:intergenic | 40.0% | |
| TCCTTCAACTATCTCTTTGG+AGG | + | chr5_3:45518089-45518108 | Msa0813950:CDS | 40.0% | |
| TCCTCCAAAGAGATAGTTGA+AGG | - | chr5_3:45518093-45518112 | None:intergenic | 40.0% | |
| ! | TCAACTATCTCTTTGGAGGA+TGG | + | chr5_3:45518093-45518112 | Msa0813950:CDS | 40.0% |
| TCAAGGAACGAAACTCAATG+CGG | + | chr5_3:45518353-45518372 | Msa0813950:CDS | 40.0% | |
| GAACCACTGAATTTCCATCT+TGG | - | chr5_3:45518547-45518566 | None:intergenic | 40.0% | |
| AGGCTCCAAAACCATTTGAA+TGG | - | chr5_3:45518669-45518688 | None:intergenic | 40.0% | |
| AACGCGTCAAACATGAAGTT+GGG | - | chr5_3:45518731-45518750 | None:intergenic | 40.0% | |
| AGAAACCATCAAAGACCTAG+AGG | + | chr5_3:45518757-45518776 | Msa0813950:CDS | 40.0% | |
| TGTTTCCTCTAGGTCTTTGA+TGG | - | chr5_3:45518765-45518784 | None:intergenic | 40.0% | |
| AGGATGTTCACAATATGCCA+TGG | + | chr5_3:45518904-45518923 | Msa0813950:CDS | 40.0% | |
| TGTTCACAATATGCCATGGA+AGG | + | chr5_3:45518908-45518927 | Msa0813950:CDS | 40.0% | |
| CAGTAGTGGTTGAGAATCAT+TGG | - | chr5_3:45518970-45518989 | None:intergenic | 40.0% | |
| GAAGTTAAGGCTAGAACGTT+TGG | - | chr5_3:45516991-45517010 | None:intergenic | 40.0% | |
| !! | GTTCTAGCCTTAACTTCCTA+TGG | + | chr5_3:45516994-45517013 | Msa0813950:CDS | 40.0% |
| CCGCCTAAAAGACAAATAGA+AGG | - | chr5_3:45517072-45517091 | None:intergenic | 40.0% | |
| CAGGTCACTAAAATTGGCAT+AGG | - | chr5_3:45517377-45517396 | None:intergenic | 40.0% | |
| CATGTCATGTGCATGACATA+TGG | - | chr5_3:45517414-45517433 | None:intergenic | 40.0% | |
| ! | AGATTCCACACGTATTTTCG+TGG | - | chr5_3:45517815-45517834 | None:intergenic | 40.0% |
| GAGACTAAGCTCTTCTACTT+AGG | - | chr5_3:45517912-45517931 | None:intergenic | 40.0% | |
| GCATCATCCATCTCCAAATT+TGG | - | chr5_3:45517998-45518017 | None:intergenic | 40.0% | |
| TCCTTCAACTATCTCTTTGG+AGG | + | chr5_3:45518089-45518108 | Msa0813950:CDS | 40.0% | |
| TCCTCCAAAGAGATAGTTGA+AGG | - | chr5_3:45518093-45518112 | None:intergenic | 40.0% | |
| ! | TCAACTATCTCTTTGGAGGA+TGG | + | chr5_3:45518093-45518112 | Msa0813950:CDS | 40.0% |
| TCAAGGAACGAAACTCAATG+CGG | + | chr5_3:45518353-45518372 | Msa0813950:CDS | 40.0% | |
| GAACCACTGAATTTCCATCT+TGG | - | chr5_3:45518547-45518566 | None:intergenic | 40.0% | |
| AGGCTCCAAAACCATTTGAA+TGG | - | chr5_3:45518669-45518688 | None:intergenic | 40.0% | |
| AACGCGTCAAACATGAAGTT+GGG | - | chr5_3:45518731-45518750 | None:intergenic | 40.0% | |
| AGAAACCATCAAAGACCTAG+AGG | + | chr5_3:45518757-45518776 | Msa0813950:CDS | 40.0% | |
| TGTTTCCTCTAGGTCTTTGA+TGG | - | chr5_3:45518765-45518784 | None:intergenic | 40.0% | |
| AGGATGTTCACAATATGCCA+TGG | + | chr5_3:45518904-45518923 | Msa0813950:CDS | 40.0% | |
| TGTTCACAATATGCCATGGA+AGG | + | chr5_3:45518908-45518927 | Msa0813950:CDS | 40.0% | |
| CAGTAGTGGTTGAGAATCAT+TGG | - | chr5_3:45518970-45518989 | None:intergenic | 40.0% | |
| !! | CTAGCCTTAACTTCCTATGG+TGG | + | chr5_3:45516997-45517016 | Msa0813950:CDS | 45.0% |
| ! | AGACAAATAGAAGGTGGTGG+TGG | - | chr5_3:45517063-45517082 | None:intergenic | 45.0% |
| TATGGGAGAGGTCTCATAAC+AGG | - | chr5_3:45517396-45517415 | None:intergenic | 45.0% | |
| ATGTGCATGACATATGGGAG+AGG | - | chr5_3:45517408-45517427 | None:intergenic | 45.0% | |
| !! | TCTTTAGGATGGGGGGTATA+GGG | + | chr5_3:45517457-45517476 | Msa0813950:intron | 45.0% |
| TAGGGCTATCCTCTCTTTGA+TGG | + | chr5_3:45517475-45517494 | Msa0813950:intron | 45.0% | |
| ! | CCAAAGGTGTGGAGATTTGT+GGG | + | chr5_3:45518020-45518039 | Msa0813950:CDS | 45.0% |
| ! | TGAGTGTTGCCATATCCTTG+TGG | - | chr5_3:45518183-45518202 | None:intergenic | 45.0% |
| GGCAACACTCAAGAAGTCAT+TGG | + | chr5_3:45518192-45518211 | Msa0813950:CDS | 45.0% | |
| TGCATAATACGCCAGATGCA+TGG | + | chr5_3:45518285-45518304 | Msa0813950:CDS | 45.0% | |
| GAAATGAGACTCCATGCATC+TGG | - | chr5_3:45518299-45518318 | None:intergenic | 45.0% | |
| ! | ATGTGCATCCTTTGCTGTCA+CGG | + | chr5_3:45518319-45518338 | Msa0813950:CDS | 45.0% |
| ! | CAGTGCTCTGAATTCCAAGA+TGG | + | chr5_3:45518530-45518549 | Msa0813950:CDS | 45.0% |
| AAAACTCGAGACTCGTGTGA+AGG | + | chr5_3:45518619-45518638 | Msa0813950:CDS | 45.0% | |
| ACACTCACAATCGGTGATAG+AGG | + | chr5_3:45518703-45518722 | Msa0813950:CDS | 45.0% | |
| CAACGCGTCAAACATGAAGT+TGG | - | chr5_3:45518732-45518751 | None:intergenic | 45.0% | |
| ACAAATGTTATGGTGAGGGC+CGG | + | chr5_3:45518785-45518804 | Msa0813950:intron | 45.0% | |
| ACATCCTCAATCTTGGGCTT+CGG | - | chr5_3:45518891-45518910 | None:intergenic | 45.0% | |
| TCGTCATCAAGATCCTTCCA+TGG | - | chr5_3:45518924-45518943 | None:intergenic | 45.0% | |
| GCTCGCGATAAAATCAGTAG+TGG | - | chr5_3:45518984-45519003 | None:intergenic | 45.0% | |
| !! | CTAGCCTTAACTTCCTATGG+TGG | + | chr5_3:45516997-45517016 | Msa0813950:CDS | 45.0% |
| ! | AGACAAATAGAAGGTGGTGG+TGG | - | chr5_3:45517063-45517082 | None:intergenic | 45.0% |
| TATGGGAGAGGTCTCATAAC+AGG | - | chr5_3:45517396-45517415 | None:intergenic | 45.0% | |
| ATGTGCATGACATATGGGAG+AGG | - | chr5_3:45517408-45517427 | None:intergenic | 45.0% | |
| !! | TCTTTAGGATGGGGGGTATA+GGG | + | chr5_3:45517457-45517476 | Msa0813950:intron | 45.0% |
| TAGGGCTATCCTCTCTTTGA+TGG | + | chr5_3:45517475-45517494 | Msa0813950:intron | 45.0% | |
| ! | CCAAAGGTGTGGAGATTTGT+GGG | + | chr5_3:45518020-45518039 | Msa0813950:CDS | 45.0% |
| ! | TGAGTGTTGCCATATCCTTG+TGG | - | chr5_3:45518183-45518202 | None:intergenic | 45.0% |
| GGCAACACTCAAGAAGTCAT+TGG | + | chr5_3:45518192-45518211 | Msa0813950:CDS | 45.0% | |
| TGCATAATACGCCAGATGCA+TGG | + | chr5_3:45518285-45518304 | Msa0813950:CDS | 45.0% | |
| GAAATGAGACTCCATGCATC+TGG | - | chr5_3:45518299-45518318 | None:intergenic | 45.0% | |
| ! | ATGTGCATCCTTTGCTGTCA+CGG | + | chr5_3:45518319-45518338 | Msa0813950:CDS | 45.0% |
| ! | CAGTGCTCTGAATTCCAAGA+TGG | + | chr5_3:45518530-45518549 | Msa0813950:CDS | 45.0% |
| AAAACTCGAGACTCGTGTGA+AGG | + | chr5_3:45518619-45518638 | Msa0813950:CDS | 45.0% | |
| ACACTCACAATCGGTGATAG+AGG | + | chr5_3:45518703-45518722 | Msa0813950:CDS | 45.0% | |
| CAACGCGTCAAACATGAAGT+TGG | - | chr5_3:45518732-45518751 | None:intergenic | 45.0% | |
| ACAAATGTTATGGTGAGGGC+CGG | + | chr5_3:45518785-45518804 | Msa0813950:intron | 45.0% | |
| ACATCCTCAATCTTGGGCTT+CGG | - | chr5_3:45518891-45518910 | None:intergenic | 45.0% | |
| TCGTCATCAAGATCCTTCCA+TGG | - | chr5_3:45518924-45518943 | None:intergenic | 45.0% | |
| GCTCGCGATAAAATCAGTAG+TGG | - | chr5_3:45518984-45519003 | None:intergenic | 45.0% | |
| !!! | ATAAAAAATTATGATTTTTT+TGG | - | chr5_3:45517163-45517182 | None:intergenic | 5.0% |
| !!! | AAAAATCATAATTTTTTATA+TGG | + | chr5_3:45517164-45517183 | Msa0813950:intron | 5.0% |
| !!! | ATAAAAAATTATGATTTTTT+TGG | - | chr5_3:45517163-45517182 | None:intergenic | 5.0% |
| !!! | AAAAATCATAATTTTTTATA+TGG | + | chr5_3:45517164-45517183 | Msa0813950:intron | 5.0% |
| GAACGTTTGGCAAGCAAGCT+AGG | - | chr5_3:45516978-45516997 | None:intergenic | 50.0% | |
| GCCTTAACTTCCTATGGTGG+CGG | + | chr5_3:45517000-45517019 | Msa0813950:CDS | 50.0% | |
| !! | CAAATAGAAGGTGGTGGTGG+TGG | - | chr5_3:45517060-45517079 | None:intergenic | 50.0% |
| !! | GTCTTTAGGATGGGGGGTAT+AGG | + | chr5_3:45517456-45517475 | Msa0813950:intron | 50.0% |
| GAGATGGATGATGCAGCCAA+AGG | + | chr5_3:45518004-45518023 | Msa0813950:intron | 50.0% | |
| ! | GCCAAAGGTGTGGAGATTTG+TGG | + | chr5_3:45518019-45518038 | Msa0813950:intron | 50.0% |
| CCCACAAATCTCCACACCTT+TGG | - | chr5_3:45518023-45518042 | None:intergenic | 50.0% | |
| !! | GGATTTGCTGCTGTTGTTGC+TGG | + | chr5_3:45518041-45518060 | Msa0813950:CDS | 50.0% |
| ! | CTTTGGAGGATGGACCATGT+TGG | + | chr5_3:45518103-45518122 | Msa0813950:CDS | 50.0% |
| !! | TCACGGCGCTTAGTTTGTCA+AGG | + | chr5_3:45518336-45518355 | Msa0813950:CDS | 50.0% |
| CAAATGTTATGGTGAGGGCC+GGG | + | chr5_3:45518786-45518805 | Msa0813950:intron | 50.0% | |
| GTTACCGAAGCCCAAGATTG+AGG | + | chr5_3:45518884-45518903 | Msa0813950:intron | 50.0% | |
| GAACGTTTGGCAAGCAAGCT+AGG | - | chr5_3:45516978-45516997 | None:intergenic | 50.0% | |
| GCCTTAACTTCCTATGGTGG+CGG | + | chr5_3:45517000-45517019 | Msa0813950:CDS | 50.0% | |
| !! | CAAATAGAAGGTGGTGGTGG+TGG | - | chr5_3:45517060-45517079 | None:intergenic | 50.0% |
| !! | GTCTTTAGGATGGGGGGTAT+AGG | + | chr5_3:45517456-45517475 | Msa0813950:intron | 50.0% |
| GAGATGGATGATGCAGCCAA+AGG | + | chr5_3:45518004-45518023 | Msa0813950:intron | 50.0% | |
| ! | GCCAAAGGTGTGGAGATTTG+TGG | + | chr5_3:45518019-45518038 | Msa0813950:intron | 50.0% |
| CCCACAAATCTCCACACCTT+TGG | - | chr5_3:45518023-45518042 | None:intergenic | 50.0% | |
| !! | GGATTTGCTGCTGTTGTTGC+TGG | + | chr5_3:45518041-45518060 | Msa0813950:CDS | 50.0% |
| ! | CTTTGGAGGATGGACCATGT+TGG | + | chr5_3:45518103-45518122 | Msa0813950:CDS | 50.0% |
| !! | TCACGGCGCTTAGTTTGTCA+AGG | + | chr5_3:45518336-45518355 | Msa0813950:CDS | 50.0% |
| CAAATGTTATGGTGAGGGCC+GGG | + | chr5_3:45518786-45518805 | Msa0813950:intron | 50.0% | |
| GTTACCGAAGCCCAAGATTG+AGG | + | chr5_3:45518884-45518903 | Msa0813950:intron | 50.0% | |
| GCCGCCACCATAGGAAGTTA+AGG | - | chr5_3:45517004-45517023 | None:intergenic | 55.0% | |
| CCACTGCACATAGGCGAGTA+AGG | - | chr5_3:45517099-45517118 | None:intergenic | 55.0% | |
| CCTTACTCGCCTATGTGCAG+TGG | + | chr5_3:45517096-45517115 | Msa0813950:CDS | 55.0% | |
| TACTCGCCTATGTGCAGTGG+CGG | + | chr5_3:45517099-45517118 | Msa0813950:CDS | 55.0% | |
| !!! | TTTTTTGGTCGGGTGGGCCA+TGG | - | chr5_3:45517148-45517167 | None:intergenic | 55.0% |
| GGATGATGCAGCCAAAGGTG+TGG | + | chr5_3:45518009-45518028 | Msa0813950:intron | 55.0% | |
| ! | ACTAAGCGCCGTGACAGCAA+AGG | - | chr5_3:45518330-45518349 | None:intergenic | 55.0% |
| GCCGCCACCATAGGAAGTTA+AGG | - | chr5_3:45517004-45517023 | None:intergenic | 55.0% | |
| CCACTGCACATAGGCGAGTA+AGG | - | chr5_3:45517099-45517118 | None:intergenic | 55.0% | |
| CCTTACTCGCCTATGTGCAG+TGG | + | chr5_3:45517096-45517115 | Msa0813950:CDS | 55.0% | |
| TACTCGCCTATGTGCAGTGG+CGG | + | chr5_3:45517099-45517118 | Msa0813950:CDS | 55.0% | |
| !!! | TTTTTTGGTCGGGTGGGCCA+TGG | - | chr5_3:45517148-45517167 | None:intergenic | 55.0% |
| GGATGATGCAGCCAAAGGTG+TGG | + | chr5_3:45518009-45518028 | Msa0813950:intron | 55.0% | |
| ! | ACTAAGCGCCGTGACAGCAA+AGG | - | chr5_3:45518330-45518349 | None:intergenic | 55.0% |
| GGGAGTTAAGCCGCCACCAT+AGG | - | chr5_3:45517013-45517032 | None:intergenic | 60.0% | |
| !! | GGTTGTGGTGGTGGTGTGAG+GGG | - | chr5_3:45517033-45517052 | None:intergenic | 60.0% |
| !! | CGGTTGTGGTGGTGGTGTGA+GGG | - | chr5_3:45517034-45517053 | None:intergenic | 60.0% |
| !! | GAAGGTGGTGGTGGTGGTTG+CGG | - | chr5_3:45517054-45517073 | None:intergenic | 60.0% |
| AGGGGCTATAGGGCCAAGGT+GGG | + | chr5_3:45517122-45517141 | Msa0813950:intron | 60.0% | |
| TATAGGGCCAAGGTGGGCCA+TGG | + | chr5_3:45517128-45517147 | Msa0813950:intron | 60.0% | |
| !! | CGTGTGAAGGCACTCGAGCA+CGG | + | chr5_3:45518632-45518651 | Msa0813950:CDS | 60.0% |
| GGGAGTTAAGCCGCCACCAT+AGG | - | chr5_3:45517013-45517032 | None:intergenic | 60.0% | |
| !! | GGTTGTGGTGGTGGTGTGAG+GGG | - | chr5_3:45517033-45517052 | None:intergenic | 60.0% |
| !! | CGGTTGTGGTGGTGGTGTGA+GGG | - | chr5_3:45517034-45517053 | None:intergenic | 60.0% |
| !! | GAAGGTGGTGGTGGTGGTTG+CGG | - | chr5_3:45517054-45517073 | None:intergenic | 60.0% |
| AGGGGCTATAGGGCCAAGGT+GGG | + | chr5_3:45517122-45517141 | Msa0813950:intron | 60.0% | |
| TATAGGGCCAAGGTGGGCCA+TGG | + | chr5_3:45517128-45517147 | Msa0813950:intron | 60.0% | |
| !! | CGTGTGAAGGCACTCGAGCA+CGG | + | chr5_3:45518632-45518651 | Msa0813950:CDS | 60.0% |
| !! | GCGGTTGTGGTGGTGGTGTG+AGG | - | chr5_3:45517035-45517054 | None:intergenic | 65.0% |
| GGTGGTTGCGGTTGTGGTGG+TGG | - | chr5_3:45517042-45517061 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTTGCGGTTGTGG+TGG | - | chr5_3:45517045-45517064 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTTGCGGTTG+TGG | - | chr5_3:45517048-45517067 | None:intergenic | 65.0% |
| TCGCCTATGTGCAGTGGCGG+AGG | + | chr5_3:45517102-45517121 | Msa0813950:CDS | 65.0% | |
| ! | CGCCTATGTGCAGTGGCGGA+GGG | + | chr5_3:45517103-45517122 | Msa0813950:CDS | 65.0% |
| ! | GCCTATGTGCAGTGGCGGAG+GGG | + | chr5_3:45517104-45517123 | Msa0813950:CDS | 65.0% |
| ! | TGCAGTGGCGGAGGGGCTAT+AGG | + | chr5_3:45517111-45517130 | Msa0813950:CDS | 65.0% |
| ! | GCAGTGGCGGAGGGGCTATA+GGG | + | chr5_3:45517112-45517131 | Msa0813950:CDS | 65.0% |
| GAGGGGCTATAGGGCCAAGG+TGG | + | chr5_3:45517121-45517140 | Msa0813950:intron | 65.0% | |
| !! | GCGGTTGTGGTGGTGGTGTG+AGG | - | chr5_3:45517035-45517054 | None:intergenic | 65.0% |
| GGTGGTTGCGGTTGTGGTGG+TGG | - | chr5_3:45517042-45517061 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTTGCGGTTGTGG+TGG | - | chr5_3:45517045-45517064 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTTGCGGTTG+TGG | - | chr5_3:45517048-45517067 | None:intergenic | 65.0% |
| TCGCCTATGTGCAGTGGCGG+AGG | + | chr5_3:45517102-45517121 | Msa0813950:CDS | 65.0% | |
| ! | CGCCTATGTGCAGTGGCGGA+GGG | + | chr5_3:45517103-45517122 | Msa0813950:CDS | 65.0% |
| ! | GCCTATGTGCAGTGGCGGAG+GGG | + | chr5_3:45517104-45517123 | Msa0813950:CDS | 65.0% |
| ! | TGCAGTGGCGGAGGGGCTAT+AGG | + | chr5_3:45517111-45517130 | Msa0813950:CDS | 65.0% |
| ! | GCAGTGGCGGAGGGGCTATA+GGG | + | chr5_3:45517112-45517131 | Msa0813950:CDS | 65.0% |
| GAGGGGCTATAGGGCCAAGG+TGG | + | chr5_3:45517121-45517140 | Msa0813950:intron | 65.0% | |
| GCCCCTCCGCCACTGCACAT+AGG | - | chr5_3:45517108-45517127 | None:intergenic | 70.0% | |
| GCGGAGGGGCTATAGGGCCA+AGG | + | chr5_3:45517118-45517137 | Msa0813950:CDS | 70.0% | |
| GCCCCTCCGCCACTGCACAT+AGG | - | chr5_3:45517108-45517127 | None:intergenic | 70.0% | |
| GCGGAGGGGCTATAGGGCCA+AGG | + | chr5_3:45517118-45517137 | Msa0813950:CDS | 70.0% | |
| GGGTGGGCCATGGCCCACCT+TGG | - | chr5_3:45517138-45517157 | None:intergenic | 75.0% | |
| GGGTGGGCCATGGCCCACCT+TGG | - | chr5_3:45517138-45517157 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 45516942 | 45519016 | 45516942 | ID=Msa0813950;Name=Msa0813950 |
| chr5_3 | mRNA | 45516942 | 45519016 | 45516942 | ID=Msa0813950-mRNA-1;Parent=Msa0813950;Name=Msa0813950-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.66|1|1|3|0|365 |
| chr5_3 | exon | 45516942 | 45517139 | 45516942 | ID=Msa0813950-mRNA-1:exon:13889;Parent=Msa0813950-mRNA-1 |
| chr5_3 | exon | 45518020 | 45518796 | 45518020 | ID=Msa0813950-mRNA-1:exon:13890;Parent=Msa0813950-mRNA-1 |
| chr5_3 | exon | 45518894 | 45519016 | 45518894 | ID=Msa0813950-mRNA-1:exon:13891;Parent=Msa0813950-mRNA-1 |
| chr5_3 | CDS | 45516942 | 45517139 | 45516942 | ID=Msa0813950-mRNA-1:cds;Parent=Msa0813950-mRNA-1 |
| chr5_3 | CDS | 45518020 | 45518796 | 45518020 | ID=Msa0813950-mRNA-1:cds;Parent=Msa0813950-mRNA-1 |
| chr5_3 | CDS | 45518894 | 45519016 | 45518894 | ID=Msa0813950-mRNA-1:cds;Parent=Msa0813950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
