AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0193010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193010 MtrunA17_Chr2g0283671 93.450 229 14 1 108 336 1 228 5.27e-152 426
Msa0193010 MtrunA17_Chr4g0060251 52.941 340 153 5 1 335 7 344 2.14e-122 355
Msa0193010 MtrunA17_Chr5g0405751 52.647 340 150 6 3 335 8 343 7.58e-122 354
Msa0193010 MtrunA17_Chr4g0041061 54.769 325 139 6 16 335 23 344 2.41e-121 353
Msa0193010 MtrunA17_Chr4g0040881 54.769 325 139 6 16 335 23 344 1.04e-120 351
Msa0193010 MtrunA17_Chr4g0041081 53.846 325 142 6 16 335 23 344 1.28e-120 351
Msa0193010 MtrunA17_Chr4g0024411 53.086 324 145 5 16 335 22 342 1.01e-115 338
Msa0193010 MtrunA17_Chr2g0315491 49.560 341 156 5 1 335 10 340 1.24e-109 323
Msa0193010 MtrunA17_Chr4g0041471 47.321 336 171 6 3 334 7 340 7.62e-109 321
Msa0193010 MtrunA17_Chr4g0041521 49.844 321 151 6 19 335 25 339 3.65e-104 309
Msa0193010 MtrunA17_Chr4g0041481 48.910 321 154 6 19 335 25 339 2.20e-103 307
Msa0193010 MtrunA17_Chr2g0311381 48.045 358 157 13 1 336 1 351 3.68e-101 301
Msa0193010 MtrunA17_Chr1g0208261 48.734 316 153 6 25 334 82 394 8.62e-97 296
Msa0193010 MtrunA17_Chr2g0283661 82.278 158 28 0 1 158 1 158 3.62e-96 286
Msa0193010 MtrunA17_Chr2g0283661 54.839 155 65 1 187 336 118 272 3.61e-53 176
Msa0193010 MtrunA17_Chr2g0311471 46.974 347 166 9 1 333 1 343 9.56e-96 288
Msa0193010 MtrunA17_Chr3g0134231 45.646 333 171 7 10 334 30 360 1.47e-95 291
Msa0193010 MtrunA17_Chr4g0040851 46.562 320 153 7 26 336 50 360 3.91e-95 286
Msa0193010 MtrunA17_Chr7g0248391 46.474 312 154 4 28 336 37 338 3.17e-94 283
Msa0193010 MtrunA17_Chr2g0325121 44.023 343 175 9 1 334 1 335 3.83e-94 283
Msa0193010 MtrunA17_Chr2g0319991 44.479 317 168 4 27 336 29 344 5.57e-94 283
Msa0193010 MtrunA17_Chr3g0144281 45.860 314 162 6 25 335 39 347 4.41e-93 281
Msa0193010 MtrunA17_Chr3g0116551 42.687 335 185 6 5 334 11 343 3.80e-92 279
Msa0193010 MtrunA17_Chr4g0053311 44.937 316 166 6 25 334 27 340 4.25e-92 279
Msa0193010 MtrunA17_Chr2g0311391 43.799 379 161 14 1 335 1 371 8.14e-92 278
Msa0193010 MtrunA17_Chr3g0142071 46.405 306 159 4 34 335 51 355 1.65e-91 280
Msa0193010 MtrunA17_Chr4g0058081 44.048 336 178 8 5 334 11 342 1.87e-90 275
Msa0193010 MtrunA17_Chr7g0248811 43.114 334 173 7 9 336 14 336 8.96e-89 270
Msa0193010 MtrunA17_Chr1g0153011 42.553 329 167 7 10 334 31 341 5.71e-83 258
Msa0193010 MtrunA17_Chr2g0283901 41.231 325 175 7 20 335 38 355 1.61e-74 238
Msa0193010 MtrunA17_Chr1g0156161 48.954 239 115 6 99 333 26 261 6.40e-72 224
Msa0193010 MtrunA17_Chr2g0283741 37.538 325 190 7 18 334 38 357 1.60e-68 219
Msa0193010 MtrunA17_Chr0c27g0493921 40.673 327 169 12 20 336 38 349 9.94e-67 213
Msa0193010 MtrunA17_Chr8g0379151 39.093 353 190 12 1 335 27 372 1.85e-66 213
Msa0193010 MtrunA17_Chr4g0070441 40.984 305 159 10 20 314 38 331 4.33e-63 204
Msa0193010 MtrunA17_Chr4g0035551 38.438 320 169 9 18 316 29 341 5.50e-63 204
Msa0193010 MtrunA17_Chr1g0155781 39.661 295 155 8 39 316 57 345 1.52e-62 203
Msa0193010 MtrunA17_Chr1g0199131 39.297 313 164 11 36 329 59 364 4.38e-61 199
Msa0193010 MtrunA17_Chr2g0311091 50.543 184 78 2 1 171 1 184 5.67e-58 185
Msa0193010 MtrunA17_Chr4g0036731 34.323 303 165 9 18 316 33 305 3.67e-46 159
Msa0193010 MtrunA17_Chr4g0036281 32.573 307 169 9 18 316 33 309 1.41e-43 152
Msa0193010 MtrunA17_Chr4g0037291 32.573 307 169 9 18 316 74 350 4.61e-43 152
Msa0193010 MtrunA17_Chr2g0283751 34.252 254 154 7 18 264 38 285 2.35e-39 140
Msa0193010 MtrunA17_Chr7g0248421 47.059 153 76 2 145 295 57 206 5.59e-39 137
Msa0193010 MtrunA17_Chr7g0248371 53.608 97 45 0 238 334 34 130 4.41e-31 115
Msa0193010 MtrunA17_Chr1g0156771 45.528 123 63 3 99 217 32 154 2.38e-28 107
Msa0193010 MtrunA17_Chr7g0271041 29.180 305 179 13 50 327 36 330 4.68e-27 109
Msa0193010 MtrunA17_Chr1g0167291 53.061 98 42 2 1 94 1 98 7.54e-27 102
Msa0193010 MtrunA17_Chr7g0271031 27.301 326 191 12 38 329 67 380 3.14e-26 107
Msa0193010 MtrunA17_Chr7g0248661 55.405 74 33 0 261 334 2 75 2.80e-23 91.7
Msa0193010 MtrunA17_Chr1g0147901 50.000 90 40 3 5 90 6 94 8.42e-20 84.3
Msa0193010 MtrunA17_Chr4g0011011 52.778 72 30 2 4 71 3 74 3.38e-17 75.5
Msa0193010 MtrunA17_Chr1g0156701 38.614 101 48 2 6 93 7 106 3.87e-17 76.6
Msa0193010 MtrunA17_Chr1g0156691 38.462 91 42 2 7 84 8 97 7.25e-16 72.4
Msa0193010 MtrunA17_Chr8g0379671 34.646 127 76 3 162 287 23 143 1.02e-15 73.9
Msa0193010 MtrunA17_Chr3g0120601 27.143 210 126 9 125 314 4 206 4.49e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193010 AT2G34080.1 51.754 342 153 6 3 334 4 343 3.96e-121 352
Msa0193010 AT2G27420.1 52.795 322 142 5 23 334 25 346 1.39e-114 336
Msa0193010 AT3G49340.1 50.296 338 153 5 10 334 4 339 9.11e-114 333
Msa0193010 AT1G29090.1 52.188 320 144 6 23 335 37 354 2.60e-110 325
Msa0193010 AT1G29080.1 52.063 315 143 5 27 335 33 345 2.96e-110 325
Msa0193010 AT5G45890.1 46.939 343 173 6 1 336 6 346 5.91e-109 322
Msa0193010 AT3G19390.1 44.606 343 170 6 3 335 13 345 1.01e-96 294
Msa0193010 AT1G29110.1 48.137 322 144 9 23 336 28 334 1.53e-96 290
Msa0193010 AT1G20850.1 47.452 314 159 6 25 335 43 353 6.97e-96 288
Msa0193010 AT5G43060.1 47.468 316 155 6 25 334 42 352 7.93e-96 292
Msa0193010 AT3G48340.1 45.133 339 176 8 3 334 7 342 1.26e-94 285
Msa0193010 AT4G35350.1 44.638 345 174 8 3 335 13 352 1.59e-94 285
Msa0193010 AT5G50260.1 44.767 344 177 8 1 334 1 341 3.69e-94 284
Msa0193010 AT4G23520.1 45.609 353 168 9 1 334 1 348 5.54e-94 284
Msa0193010 AT1G09850.1 46.429 308 160 4 29 334 28 332 4.58e-92 281
Msa0193010 AT1G47128.1 44.164 317 163 8 25 334 42 351 1.21e-90 279
Msa0193010 AT4G36880.1 43.598 328 173 7 18 334 34 360 4.75e-90 274
Msa0193010 AT4G11310.1 41.176 357 172 9 3 334 8 351 8.92e-90 273
Msa0193010 AT3G19400.1 45.426 317 163 6 25 335 36 348 9.45e-90 273
Msa0193010 AT4G11320.2 43.810 315 150 7 34 334 57 358 1.27e-88 270
Msa0193010 AT4G11320.1 43.810 315 150 7 34 334 57 358 1.27e-88 270
Msa0193010 AT3G48350.1 42.609 345 186 8 1 335 1 343 2.77e-86 264
Msa0193010 AT1G06260.1 44.109 331 168 8 15 334 17 341 4.67e-82 253
Msa0193010 AT3G43960.1 43.849 317 167 8 25 334 33 345 5.82e-80 248
Msa0193010 AT5G60360.1 42.593 324 167 11 20 336 46 357 2.98e-70 223
Msa0193010 AT5G60360.2 41.975 324 168 10 20 336 46 356 1.24e-68 219
Msa0193010 AT5G60360.3 42.384 302 159 9 20 314 46 339 6.27e-66 212
Msa0193010 AT4G35350.2 46.694 242 121 5 29 266 47 284 4.47e-65 207
Msa0193010 AT4G39090.1 38.644 295 158 8 39 316 57 345 2.31e-64 208
Msa0193010 AT3G45310.1 40.432 324 170 11 22 336 48 357 5.50e-63 204
Msa0193010 AT3G45310.2 39.815 324 171 10 22 336 48 356 2.70e-61 200
Msa0193010 AT2G21430.1 37.500 312 169 10 25 316 37 342 5.66e-61 199
Msa0193010 AT3G19400.2 43.089 246 131 5 25 264 36 278 2.35e-59 192
Msa0193010 AT3G54940.2 40.066 302 152 12 36 316 54 347 1.72e-58 193
Msa0193010 AT4G16190.1 38.889 306 162 8 39 327 61 358 3.19e-58 192
Msa0193010 AT3G48350.2 42.449 245 134 6 25 264 30 272 2.62e-54 180
Msa0193010 AT3G54940.3 38.428 229 123 7 36 252 54 276 1.98e-42 149
Msa0193010 AT4G01610.1 28.378 296 171 11 62 327 46 330 3.42e-28 112
Msa0193010 AT1G02305.1 27.609 297 180 9 62 329 49 339 5.42e-28 112
Msa0193010 AT4G01610.2 27.703 296 173 11 62 327 46 330 2.95e-26 107
Msa0193010 AT1G02300.1 30.476 210 119 7 140 327 146 350 3.06e-20 90.9
Msa0193010 AT2G22160.1 40.625 96 46 4 49 140 10 98 5.41e-13 65.1

Find 73 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCATTTGATCATTTAAT+TGG 0.195265 2_1:-8822262 None:intergenic
AAGCAAAGAGCTTCATTAAA+AGG 0.271345 2_1:-8822697 Msa0193020:CDS
TTGTTGGAATATCATCATTC+AGG 0.284103 2_1:-8821210 None:intergenic
AAATTCTGCCTACATATAAA+TGG 0.286686 2_1:+8822747 Msa0193010:three_prime_UTR
TACATGGGAGATGTTTATTC+AGG 0.305565 2_1:+8822404 Msa0193010:CDS
ATTGGTTGATTAAGAATTCT+TGG 0.312011 2_1:+8822498 Msa0193010:CDS
TTAAATCAGAGTATGGATTT+AGG 0.312768 2_1:-8821096 None:intergenic
CAGCAATGGATGATAAAATA+TGG 0.313356 2_1:+8820962 Msa0193010:CDS
TCACTAGTTAAATCAGAGTA+TGG 0.325666 2_1:-8821103 None:intergenic
GAGTTTATTGCTTCACATAC+TGG 0.326687 2_1:+8821127 Msa0193010:CDS
AGAATTCTTGGGGTAAAGAT+TGG 0.334902 2_1:+8822510 Msa0193010:CDS
GTCTGACTACCTTCTTGATA+TGG 0.336745 2_1:-8822236 None:intergenic
GACAGTGTTCTTGACATGAT+TGG 0.347406 2_1:-8820914 None:intergenic
TTGGTTGATTAAGAATTCTT+GGG 0.374775 2_1:+8822499 Msa0193010:CDS
GAATTCTTGGGGTAAAGATT+GGG 0.376941 2_1:+8822511 Msa0193010:CDS
CTCATTATCTGAGCAACAAT+TGG 0.401955 2_1:+8822112 Msa0193010:CDS
TGCTTACTATTGTGGATGTA+TGG 0.402458 2_1:+8822793 Msa0193010:three_prime_UTR
ACTGCAATGCCAACTGATAC+TGG 0.406208 2_1:-8822362 None:intergenic
TCAGTCGTGGCTGCTGTAGA+AGG 0.411115 2_1:+8822059 Msa0193010:CDS
TAGCAGTTGTTGTTCATCAT+TGG 0.413217 2_1:-8822321 None:intergenic
TGTTTGCATGATTATCTTGT+GGG 0.419752 2_1:+8820880 Msa0193010:CDS
TGCCTCCAATCAAAATTTGT+TGG 0.420797 2_1:-8821226 None:intergenic
TGGGTGTGATGGAGGTAATA+TGG 0.436333 2_1:+8822157 Msa0193010:CDS
TATTATATTGCTTACTATTG+TGG 0.446413 2_1:+8822785 Msa0193010:three_prime_UTR
GGTTTGTATTATATATTTGA+AGG 0.448659 2_1:-8822186 None:intergenic
ACAGTGTTCTTGACATGATT+GGG 0.450300 2_1:-8820913 None:intergenic
GGTAAAGATTGGGGTGAAGA+AGG 0.460104 2_1:+8822521 Msa0193010:CDS
TGATGAATTTCAACATTACA+TGG 0.464191 2_1:+8822388 Msa0193010:CDS
TGTCTCACTAACAATACCTT+GGG 0.465163 2_1:-8822207 None:intergenic
AATATCATCATTCAGGTTGA+AGG 0.470988 2_1:-8821203 None:intergenic
GCAGTTACTGCAGTTGGTTA+CGG 0.478465 2_1:+8822452 Msa0193010:CDS
TACTGCAACTGACCTCATCT+TGG 0.480728 2_1:-8821179 None:intergenic
CTGTCTCACTAACAATACCT+TGG 0.493668 2_1:-8822208 None:intergenic
AGTTGTTGTTCATCATTGGC+AGG 0.496843 2_1:-8822317 None:intergenic
AACCATGCAGTTACTGCAGT+TGG 0.506721 2_1:+8822446 Msa0193010:CDS
AGGTTACATGAAGTTGTTGA+GGG 0.508816 2_1:+8822541 Msa0193010:CDS
CTGTTTGCATGATTATCTTG+TGG 0.513337 2_1:+8820879 Msa0193010:CDS
GCAATGCCACATTGACCTCC+TGG 0.513337 2_1:-8822575 None:intergenic
ATAGAGAATTTCAACAATGC+TGG 0.520071 2_1:+8821052 Msa0193010:CDS
TTGAGGGAAAGTGGTGAACC+AGG 0.520538 2_1:+8822557 Msa0193010:CDS
AATTCTTGGGGTAAAGATTG+GGG 0.530447 2_1:+8822512 Msa0193010:CDS
GGTTACGGTGTAAGTGAAGA+TGG 0.532156 2_1:+8822467 Msa0193010:CDS
GTGAAGATGGAACTAAGTAT+TGG 0.533019 2_1:+8822480 Msa0193010:CDS
AAGACATACCACAACTGCCT+TGG 0.539526 2_1:-8821276 None:intergenic
ATGAAGTTGTTGAGGGAAAG+TGG 0.542145 2_1:+8822548 Msa0193010:CDS
TGCAACTGACCTCATCTTGG+AGG 0.547643 2_1:-8821176 None:intergenic
GTTAAAGACCAAGGCAGTTG+TGG 0.558254 2_1:+8821268 Msa0193010:CDS
TACGAATTTCAAAATATCAG+AGG 0.563458 2_1:+8822634 Msa0193010:three_prime_UTR
ACTGCCTTGGTCTTTAACAT+CGG 0.570004 2_1:-8821263 None:intergenic
GAACAGAACAATGGGTGTGA+TGG 0.572310 2_1:+8822146 Msa0193010:CDS
AAGGTTACATGAAGTTGTTG+AGG 0.582698 2_1:+8822540 Msa0193010:CDS
ACTGCGATGAACAGAACAAT+GGG 0.582764 2_1:+8822138 Msa0193010:CDS
ATATCATCATTCAGGTTGAA+GGG 0.586071 2_1:-8821202 None:intergenic
TGGTTGATTAAGAATTCTTG+GGG 0.586376 2_1:+8822500 Msa0193010:CDS
TTGTGGATGTATGGACTAAG+TGG 0.599059 2_1:+8822802 Msa0193010:three_prime_UTR
ACAGATTATCCATATCAAGA+AGG 0.601748 2_1:+8822227 Msa0193010:CDS
GATGTTTATTCAGGAACATG+TGG 0.602261 2_1:+8822413 Msa0193010:CDS
AACCAACTGCAGTAACTGCA+TGG 0.607601 2_1:-8822448 None:intergenic
GGTAACAAGAGTTACAAGCT+TGG 0.620609 2_1:+8821073 Msa0193010:CDS
GTATCAGTTGGCATTGCAGT+CGG 0.623362 2_1:+8822365 Msa0193010:CDS
GATGAATTTCAACATTACAT+GGG 0.623570 2_1:+8822389 Msa0193010:CDS
TTGTTGAAGCACATCAGCAA+TGG 0.625595 2_1:+8820948 Msa0193010:CDS
GACTTTCATCCTCCAAGATG+AGG 0.628604 2_1:+8821167 Msa0193010:CDS
GCACAACAACCAGTATCAGT+TGG 0.635741 2_1:+8822353 Msa0193010:CDS
GGTGCTGTGAAAATCAAGAC+TGG 0.639937 2_1:+8822080 Msa0193010:CDS
CAGAACAATGGGTGTGATGG+AGG 0.644692 2_1:+8822149 Msa0193010:CDS
AAATATATAATACAAACCCA+AGG 0.655643 2_1:+8822191 Msa0193010:CDS
TCATCTTGGAGGATGAAAGT+CGG 0.661178 2_1:-8821165 None:intergenic
GGTGAACCAGGAGGTCAATG+TGG 0.664219 2_1:+8822569 Msa0193010:CDS
GACTGCGATGAACAGAACAA+TGG 0.669619 2_1:+8822137 Msa0193010:CDS
GTTACCGATGTTAAAGACCA+AGG 0.675798 2_1:+8821259 Msa0193010:CDS
TGTGGATGTATGGACTAAGT+GGG 0.676007 2_1:+8822803 Msa0193010:three_prime_UTR
AGGGAAAGTGGTGAACCAGG+AGG 0.728920 2_1:+8822560 Msa0193010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTGATATAAAATAAAA+TGG - chr2_1:8821483-8821502 None:intergenic 10.0%
!!! AAAGTTACATTTTAATATTA+AGG + chr2_1:8821873-8821892 Msa0193010:intron 10.0%
!! ATTCGTATAAAAATATTATA+TGG - chr2_1:8822621-8822640 None:intergenic 10.0%
!!! TTTTGTGATATAAAATAAAA+TGG - chr2_1:8821483-8821502 None:intergenic 10.0%
!!! AAAGTTACATTTTAATATTA+AGG + chr2_1:8821873-8821892 Msa0193010:intron 10.0%
!! ATTCGTATAAAAATATTATA+TGG - chr2_1:8822621-8822640 None:intergenic 10.0%
!!! TAAAAAACTTCATTTTTTGA+GGG - chr2_1:8820856-8820875 None:intergenic 15.0%
!!! ATAAAAAACTTCATTTTTTG+AGG - chr2_1:8820857-8820876 None:intergenic 15.0%
!!! TATTTTTTAATTAGTCATCT+TGG + chr2_1:8821316-8821335 Msa0193010:intron 15.0%
!! TGATATAAAATAAAATGGAA+TGG - chr2_1:8821478-8821497 None:intergenic 15.0%
!!! TTTAGATTTTTCTTTTTTGA+TGG - chr2_1:8821706-8821725 None:intergenic 15.0%
!! AAATATCGAAAAGTTATTTA+AGG + chr2_1:8821762-8821781 Msa0193010:intron 15.0%
!! ATTTCATTTGATCATTTAAT+TGG - chr2_1:8822265-8822284 None:intergenic 15.0%
!! GTATAAAAATATTATATGGT+GGG - chr2_1:8822617-8822636 None:intergenic 15.0%
!!! TTATTTTTCCATTTATATGT+AGG - chr2_1:8822758-8822777 Msa0193020:intron 15.0%
!!! TAAAAAACTTCATTTTTTGA+GGG - chr2_1:8820856-8820875 None:intergenic 15.0%
!!! ATAAAAAACTTCATTTTTTG+AGG - chr2_1:8820857-8820876 None:intergenic 15.0%
!!! TATTTTTTAATTAGTCATCT+TGG + chr2_1:8821316-8821335 Msa0193010:intron 15.0%
!! TGATATAAAATAAAATGGAA+TGG - chr2_1:8821478-8821497 None:intergenic 15.0%
!!! TTTAGATTTTTCTTTTTTGA+TGG - chr2_1:8821706-8821725 None:intergenic 15.0%
!! AAATATCGAAAAGTTATTTA+AGG + chr2_1:8821762-8821781 Msa0193010:intron 15.0%
!! ATTTCATTTGATCATTTAAT+TGG - chr2_1:8822265-8822284 None:intergenic 15.0%
!! GTATAAAAATATTATATGGT+GGG - chr2_1:8822617-8822636 None:intergenic 15.0%
!!! TTATTTTTCCATTTATATGT+AGG - chr2_1:8822758-8822777 Msa0193020:intron 15.0%
!!! AAAAAACTTCATTTTTTGAG+GGG - chr2_1:8820855-8820874 None:intergenic 20.0%
!!! ATATTCCAACAAATTTTGAT+TGG + chr2_1:8821221-8821240 Msa0193010:CDS 20.0%
!!! AATAACTTTTCGATATTTGA+TGG - chr2_1:8821760-8821779 None:intergenic 20.0%
!!! TATCATTCAATATGTTTTGT+AGG + chr2_1:8822020-8822039 Msa0193010:intron 20.0%
!! GGTTTGTATTATATATTTGA+AGG - chr2_1:8822189-8822208 None:intergenic 20.0%
!! AAATATATAATACAAACCCA+AGG + chr2_1:8822191-8822210 Msa0193010:CDS 20.0%
!! CGTATAAAAATATTATATGG+TGG - chr2_1:8822618-8822637 None:intergenic 20.0%
!! TATTATATTGCTTACTATTG+TGG + chr2_1:8822785-8822804 Msa0193010:three_prime_UTR 20.0%
!!! AAAAAACTTCATTTTTTGAG+GGG - chr2_1:8820855-8820874 None:intergenic 20.0%
!!! ATATTCCAACAAATTTTGAT+TGG + chr2_1:8821221-8821240 Msa0193010:CDS 20.0%
!!! AATAACTTTTCGATATTTGA+TGG - chr2_1:8821760-8821779 None:intergenic 20.0%
!!! TATCATTCAATATGTTTTGT+AGG + chr2_1:8822020-8822039 Msa0193010:intron 20.0%
!! GGTTTGTATTATATATTTGA+AGG - chr2_1:8822189-8822208 None:intergenic 20.0%
!! AAATATATAATACAAACCCA+AGG + chr2_1:8822191-8822210 Msa0193010:CDS 20.0%
!! CGTATAAAAATATTATATGG+TGG - chr2_1:8822618-8822637 None:intergenic 20.0%
!! TATTATATTGCTTACTATTG+TGG + chr2_1:8822785-8822804 Msa0193010:three_prime_UTR 20.0%
!! AAGACAATGTTTTGTGAAAA+AGG - chr2_1:8820811-8820830 None:intergenic 25.0%
! TTAAATCAGAGTATGGATTT+AGG - chr2_1:8821099-8821118 None:intergenic 25.0%
! TATGCTTCATTAAAAGTTCT+CGG - chr2_1:8821518-8821537 None:intergenic 25.0%
! TGATGTGTTTATATGGTATT+TGG - chr2_1:8821550-8821569 None:intergenic 25.0%
! GCATTATTGATGTGTTTATA+TGG - chr2_1:8821557-8821576 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG + chr2_1:8821658-8821677 Msa0193010:intron 25.0%
!!! AGATTTTTCTTTTTTGATGG+TGG - chr2_1:8821703-8821722 None:intergenic 25.0%
! TGATGAATTTCAACATTACA+TGG + chr2_1:8822388-8822407 Msa0193010:CDS 25.0%
! GATGAATTTCAACATTACAT+GGG + chr2_1:8822389-8822408 Msa0193010:CDS 25.0%
! ATTGGTTGATTAAGAATTCT+TGG + chr2_1:8822498-8822517 Msa0193010:CDS 25.0%
! TTGGTTGATTAAGAATTCTT+GGG + chr2_1:8822499-8822518 Msa0193010:CDS 25.0%
! TACGAATTTCAAAATATCAG+AGG + chr2_1:8822634-8822653 Msa0193010:three_prime_UTR 25.0%
! AAATTCTGCCTACATATAAA+TGG + chr2_1:8822747-8822766 Msa0193010:three_prime_UTR 25.0%
!! AAGACAATGTTTTGTGAAAA+AGG - chr2_1:8820811-8820830 None:intergenic 25.0%
! TTAAATCAGAGTATGGATTT+AGG - chr2_1:8821099-8821118 None:intergenic 25.0%
! TATGCTTCATTAAAAGTTCT+CGG - chr2_1:8821518-8821537 None:intergenic 25.0%
! TGATGTGTTTATATGGTATT+TGG - chr2_1:8821550-8821569 None:intergenic 25.0%
! GCATTATTGATGTGTTTATA+TGG - chr2_1:8821557-8821576 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG + chr2_1:8821658-8821677 Msa0193010:intron 25.0%
!!! AGATTTTTCTTTTTTGATGG+TGG - chr2_1:8821703-8821722 None:intergenic 25.0%
! TGATGAATTTCAACATTACA+TGG + chr2_1:8822388-8822407 Msa0193010:CDS 25.0%
! GATGAATTTCAACATTACAT+GGG + chr2_1:8822389-8822408 Msa0193010:CDS 25.0%
! ATTGGTTGATTAAGAATTCT+TGG + chr2_1:8822498-8822517 Msa0193010:CDS 25.0%
! TTGGTTGATTAAGAATTCTT+GGG + chr2_1:8822499-8822518 Msa0193010:CDS 25.0%
! TACGAATTTCAAAATATCAG+AGG + chr2_1:8822634-8822653 Msa0193010:three_prime_UTR 25.0%
! AAATTCTGCCTACATATAAA+TGG + chr2_1:8822747-8822766 Msa0193010:three_prime_UTR 25.0%
TGTTTGCATGATTATCTTGT+GGG + chr2_1:8820880-8820899 Msa0193010:CDS 30.0%
CAGCAATGGATGATAAAATA+TGG + chr2_1:8820962-8820981 Msa0193010:CDS 30.0%
ATAGAGAATTTCAACAATGC+TGG + chr2_1:8821052-8821071 Msa0193010:CDS 30.0%
TCACTAGTTAAATCAGAGTA+TGG - chr2_1:8821106-8821125 None:intergenic 30.0%
!! ATATCATCATTCAGGTTGAA+GGG - chr2_1:8821205-8821224 None:intergenic 30.0%
!! AATATCATCATTCAGGTTGA+AGG - chr2_1:8821206-8821225 None:intergenic 30.0%
TTGTTGGAATATCATCATTC+AGG - chr2_1:8821213-8821232 None:intergenic 30.0%
!!! TTCCAACAAATTTTGATTGG+AGG + chr2_1:8821224-8821243 Msa0193010:CDS 30.0%
TATTGGAGACTTTGTTAGTT+TGG - chr2_1:8821375-8821394 None:intergenic 30.0%
AACAAAGTCTCCAATATGTT+TGG + chr2_1:8821379-8821398 Msa0193010:intron 30.0%
! CTCCAATATGTTTGGATTTT+CGG + chr2_1:8821387-8821406 Msa0193010:intron 30.0%
TACCGAAAATCCAAACATAT+TGG - chr2_1:8821392-8821411 None:intergenic 30.0%
! TGTTTGGATTTTCGGTATAA+AGG + chr2_1:8821395-8821414 Msa0193010:intron 30.0%
CATAAAAATATGCAAGGTCT+GGG + chr2_1:8821664-8821683 Msa0193010:intron 30.0%
ATAAAAATATGCAAGGTCTG+GGG + chr2_1:8821665-8821684 Msa0193010:intron 30.0%
!! TGTAATTTCTAGCCTTAGAT+AGG - chr2_1:8821904-8821923 None:intergenic 30.0%
! TATGTTTTGTAGGATGTTGT+TGG + chr2_1:8822030-8822049 Msa0193010:intron 30.0%
! ATGTTTTGTAGGATGTTGTT+GGG + chr2_1:8822031-8822050 Msa0193010:intron 30.0%
ACAGATTATCCATATCAAGA+AGG + chr2_1:8822227-8822246 Msa0193010:CDS 30.0%
TGGTTGATTAAGAATTCTTG+GGG + chr2_1:8822500-8822519 Msa0193010:CDS 30.0%
AAGCAAAGAGCTTCATTAAA+AGG - chr2_1:8822700-8822719 Msa0193020:CDS 30.0%
TGTTTGCATGATTATCTTGT+GGG + chr2_1:8820880-8820899 Msa0193010:CDS 30.0%
CAGCAATGGATGATAAAATA+TGG + chr2_1:8820962-8820981 Msa0193010:CDS 30.0%
ATAGAGAATTTCAACAATGC+TGG + chr2_1:8821052-8821071 Msa0193010:CDS 30.0%
TCACTAGTTAAATCAGAGTA+TGG - chr2_1:8821106-8821125 None:intergenic 30.0%
!! ATATCATCATTCAGGTTGAA+GGG - chr2_1:8821205-8821224 None:intergenic 30.0%
!! AATATCATCATTCAGGTTGA+AGG - chr2_1:8821206-8821225 None:intergenic 30.0%
TTGTTGGAATATCATCATTC+AGG - chr2_1:8821213-8821232 None:intergenic 30.0%
!!! TTCCAACAAATTTTGATTGG+AGG + chr2_1:8821224-8821243 Msa0193010:CDS 30.0%
TATTGGAGACTTTGTTAGTT+TGG - chr2_1:8821375-8821394 None:intergenic 30.0%
AACAAAGTCTCCAATATGTT+TGG + chr2_1:8821379-8821398 Msa0193010:intron 30.0%
! CTCCAATATGTTTGGATTTT+CGG + chr2_1:8821387-8821406 Msa0193010:intron 30.0%
TACCGAAAATCCAAACATAT+TGG - chr2_1:8821392-8821411 None:intergenic 30.0%
! TGTTTGGATTTTCGGTATAA+AGG + chr2_1:8821395-8821414 Msa0193010:intron 30.0%
CATAAAAATATGCAAGGTCT+GGG + chr2_1:8821664-8821683 Msa0193010:intron 30.0%
ATAAAAATATGCAAGGTCTG+GGG + chr2_1:8821665-8821684 Msa0193010:intron 30.0%
!! TGTAATTTCTAGCCTTAGAT+AGG - chr2_1:8821904-8821923 None:intergenic 30.0%
! TATGTTTTGTAGGATGTTGT+TGG + chr2_1:8822030-8822049 Msa0193010:intron 30.0%
! ATGTTTTGTAGGATGTTGTT+GGG + chr2_1:8822031-8822050 Msa0193010:intron 30.0%
ACAGATTATCCATATCAAGA+AGG + chr2_1:8822227-8822246 Msa0193010:CDS 30.0%
TGGTTGATTAAGAATTCTTG+GGG + chr2_1:8822500-8822519 Msa0193010:CDS 30.0%
AAGCAAAGAGCTTCATTAAA+AGG - chr2_1:8822700-8822719 Msa0193020:CDS 30.0%
CTGTTTGCATGATTATCTTG+TGG + chr2_1:8820879-8820898 Msa0193010:CDS 35.0%
ACAGTGTTCTTGACATGATT+GGG - chr2_1:8820916-8820935 None:intergenic 35.0%
! CTTTTTGCGTTTCTCTAACT+CGG - chr2_1:8821008-8821027 None:intergenic 35.0%
GAGTTTATTGCTTCACATAC+TGG + chr2_1:8821127-8821146 Msa0193010:CDS 35.0%
TGCCTCCAATCAAAATTTGT+TGG - chr2_1:8821229-8821248 None:intergenic 35.0%
!!! AATTTTGATTGGAGGCAACA+AGG + chr2_1:8821232-8821251 Msa0193010:CDS 35.0%
TAATTAGTCATCTTGGAGCA+TGG + chr2_1:8821323-8821342 Msa0193010:intron 35.0%
GGTATAAAGGTTGAATGACA+TGG + chr2_1:8821408-8821427 Msa0193010:intron 35.0%
AAAAGTTCTCGGAGGATATT+TGG - chr2_1:8821507-8821526 None:intergenic 35.0%
GCATAAAAATATGCAAGGTC+TGG + chr2_1:8821663-8821682 Msa0193010:intron 35.0%
!!! TTTTCTTTTTTGATGGTGGC+CGG - chr2_1:8821699-8821718 None:intergenic 35.0%
ATTAAGGAACCACCTATCTA+AGG + chr2_1:8821889-8821908 Msa0193010:intron 35.0%
!! AATTTCTAGCCTTAGATAGG+TGG - chr2_1:8821901-8821920 None:intergenic 35.0%
CTCATTATCTGAGCAACAAT+TGG + chr2_1:8822112-8822131 Msa0193010:CDS 35.0%
TGTCTCACTAACAATACCTT+GGG - chr2_1:8822210-8822229 None:intergenic 35.0%
! TAGCAGTTGTTGTTCATCAT+TGG - chr2_1:8822324-8822343 None:intergenic 35.0%
TACATGGGAGATGTTTATTC+AGG + chr2_1:8822404-8822423 Msa0193010:CDS 35.0%
GATGTTTATTCAGGAACATG+TGG + chr2_1:8822413-8822432 Msa0193010:CDS 35.0%
GTGAAGATGGAACTAAGTAT+TGG + chr2_1:8822480-8822499 Msa0193010:CDS 35.0%
AGAATTCTTGGGGTAAAGAT+TGG + chr2_1:8822510-8822529 Msa0193010:CDS 35.0%
GAATTCTTGGGGTAAAGATT+GGG + chr2_1:8822511-8822530 Msa0193010:CDS 35.0%
AATTCTTGGGGTAAAGATTG+GGG + chr2_1:8822512-8822531 Msa0193010:CDS 35.0%
AAGGTTACATGAAGTTGTTG+AGG + chr2_1:8822540-8822559 Msa0193010:CDS 35.0%
AGGTTACATGAAGTTGTTGA+GGG + chr2_1:8822541-8822560 Msa0193010:CDS 35.0%
TGCTTACTATTGTGGATGTA+TGG + chr2_1:8822793-8822812 Msa0193010:three_prime_UTR 35.0%
CTGTTTGCATGATTATCTTG+TGG + chr2_1:8820879-8820898 Msa0193010:CDS 35.0%
ACAGTGTTCTTGACATGATT+GGG - chr2_1:8820916-8820935 None:intergenic 35.0%
! CTTTTTGCGTTTCTCTAACT+CGG - chr2_1:8821008-8821027 None:intergenic 35.0%
GAGTTTATTGCTTCACATAC+TGG + chr2_1:8821127-8821146 Msa0193010:CDS 35.0%
TGCCTCCAATCAAAATTTGT+TGG - chr2_1:8821229-8821248 None:intergenic 35.0%
!!! AATTTTGATTGGAGGCAACA+AGG + chr2_1:8821232-8821251 Msa0193010:CDS 35.0%
TAATTAGTCATCTTGGAGCA+TGG + chr2_1:8821323-8821342 Msa0193010:intron 35.0%
GGTATAAAGGTTGAATGACA+TGG + chr2_1:8821408-8821427 Msa0193010:intron 35.0%
AAAAGTTCTCGGAGGATATT+TGG - chr2_1:8821507-8821526 None:intergenic 35.0%
GCATAAAAATATGCAAGGTC+TGG + chr2_1:8821663-8821682 Msa0193010:intron 35.0%
!!! TTTTCTTTTTTGATGGTGGC+CGG - chr2_1:8821699-8821718 None:intergenic 35.0%
ATTAAGGAACCACCTATCTA+AGG + chr2_1:8821889-8821908 Msa0193010:intron 35.0%
!! AATTTCTAGCCTTAGATAGG+TGG - chr2_1:8821901-8821920 None:intergenic 35.0%
CTCATTATCTGAGCAACAAT+TGG + chr2_1:8822112-8822131 Msa0193010:CDS 35.0%
TGTCTCACTAACAATACCTT+GGG - chr2_1:8822210-8822229 None:intergenic 35.0%
! TAGCAGTTGTTGTTCATCAT+TGG - chr2_1:8822324-8822343 None:intergenic 35.0%
TACATGGGAGATGTTTATTC+AGG + chr2_1:8822404-8822423 Msa0193010:CDS 35.0%
GATGTTTATTCAGGAACATG+TGG + chr2_1:8822413-8822432 Msa0193010:CDS 35.0%
GTGAAGATGGAACTAAGTAT+TGG + chr2_1:8822480-8822499 Msa0193010:CDS 35.0%
AGAATTCTTGGGGTAAAGAT+TGG + chr2_1:8822510-8822529 Msa0193010:CDS 35.0%
GAATTCTTGGGGTAAAGATT+GGG + chr2_1:8822511-8822530 Msa0193010:CDS 35.0%
AATTCTTGGGGTAAAGATTG+GGG + chr2_1:8822512-8822531 Msa0193010:CDS 35.0%
AAGGTTACATGAAGTTGTTG+AGG + chr2_1:8822540-8822559 Msa0193010:CDS 35.0%
AGGTTACATGAAGTTGTTGA+GGG + chr2_1:8822541-8822560 Msa0193010:CDS 35.0%
TGCTTACTATTGTGGATGTA+TGG + chr2_1:8822793-8822812 Msa0193010:three_prime_UTR 35.0%
GACAGTGTTCTTGACATGAT+TGG - chr2_1:8820917-8820936 None:intergenic 40.0%
TTGTTGAAGCACATCAGCAA+TGG + chr2_1:8820948-8820967 Msa0193010:CDS 40.0%
GGTAACAAGAGTTACAAGCT+TGG + chr2_1:8821073-8821092 Msa0193010:CDS 40.0%
TCATCTTGGAGGATGAAAGT+CGG - chr2_1:8821168-8821187 None:intergenic 40.0%
GTTACCGATGTTAAAGACCA+AGG + chr2_1:8821259-8821278 Msa0193010:CDS 40.0%
! ACTGCCTTGGTCTTTAACAT+CGG - chr2_1:8821266-8821285 None:intergenic 40.0%
GCTTCATTAAAAGTTCTCGG+AGG - chr2_1:8821515-8821534 None:intergenic 40.0%
!!! TTTCTTTTTTGATGGTGGCC+GGG - chr2_1:8821698-8821717 None:intergenic 40.0%
GCACAAACACTGATCGAATT+AGG - chr2_1:8821816-8821835 None:intergenic 40.0%
ACTGCGATGAACAGAACAAT+GGG + chr2_1:8822138-8822157 Msa0193010:CDS 40.0%
CTGTCTCACTAACAATACCT+TGG - chr2_1:8822211-8822230 None:intergenic 40.0%
GTCTGACTACCTTCTTGATA+TGG - chr2_1:8822239-8822258 None:intergenic 40.0%
! AGTTGTTGTTCATCATTGGC+AGG - chr2_1:8822320-8822339 None:intergenic 40.0%
ATGAAGTTGTTGAGGGAAAG+TGG + chr2_1:8822548-8822567 Msa0193010:CDS 40.0%
! TTGTGGATGTATGGACTAAG+TGG + chr2_1:8822802-8822821 Msa0193010:three_prime_UTR 40.0%
! TGTGGATGTATGGACTAAGT+GGG + chr2_1:8822803-8822822 Msa0193010:three_prime_UTR 40.0%
GACAGTGTTCTTGACATGAT+TGG - chr2_1:8820917-8820936 None:intergenic 40.0%
TTGTTGAAGCACATCAGCAA+TGG + chr2_1:8820948-8820967 Msa0193010:CDS 40.0%
GGTAACAAGAGTTACAAGCT+TGG + chr2_1:8821073-8821092 Msa0193010:CDS 40.0%
TCATCTTGGAGGATGAAAGT+CGG - chr2_1:8821168-8821187 None:intergenic 40.0%
GTTACCGATGTTAAAGACCA+AGG + chr2_1:8821259-8821278 Msa0193010:CDS 40.0%
! ACTGCCTTGGTCTTTAACAT+CGG - chr2_1:8821266-8821285 None:intergenic 40.0%
GCTTCATTAAAAGTTCTCGG+AGG - chr2_1:8821515-8821534 None:intergenic 40.0%
!!! TTTCTTTTTTGATGGTGGCC+GGG - chr2_1:8821698-8821717 None:intergenic 40.0%
GCACAAACACTGATCGAATT+AGG - chr2_1:8821816-8821835 None:intergenic 40.0%
ACTGCGATGAACAGAACAAT+GGG + chr2_1:8822138-8822157 Msa0193010:CDS 40.0%
CTGTCTCACTAACAATACCT+TGG - chr2_1:8822211-8822230 None:intergenic 40.0%
GTCTGACTACCTTCTTGATA+TGG - chr2_1:8822239-8822258 None:intergenic 40.0%
! AGTTGTTGTTCATCATTGGC+AGG - chr2_1:8822320-8822339 None:intergenic 40.0%
ATGAAGTTGTTGAGGGAAAG+TGG + chr2_1:8822548-8822567 Msa0193010:CDS 40.0%
! TTGTGGATGTATGGACTAAG+TGG + chr2_1:8822802-8822821 Msa0193010:three_prime_UTR 40.0%
! TGTGGATGTATGGACTAAGT+GGG + chr2_1:8822803-8822822 Msa0193010:three_prime_UTR 40.0%
GACTTTCATCCTCCAAGATG+AGG + chr2_1:8821167-8821186 Msa0193010:CDS 45.0%
TACTGCAACTGACCTCATCT+TGG - chr2_1:8821182-8821201 None:intergenic 45.0%
GTTAAAGACCAAGGCAGTTG+TGG + chr2_1:8821268-8821287 Msa0193010:CDS 45.0%
AAGACATACCACAACTGCCT+TGG - chr2_1:8821279-8821298 None:intergenic 45.0%
!!! TTCTTTTTTGATGGTGGCCG+GGG - chr2_1:8821697-8821716 None:intergenic 45.0%
! TTGTTGGGCATTTTCAGTCG+TGG + chr2_1:8822046-8822065 Msa0193010:CDS 45.0%
! GGTGCTGTGAAAATCAAGAC+TGG + chr2_1:8822080-8822099 Msa0193010:CDS 45.0%
GACTGCGATGAACAGAACAA+TGG + chr2_1:8822137-8822156 Msa0193010:CDS 45.0%
GAACAGAACAATGGGTGTGA+TGG + chr2_1:8822146-8822165 Msa0193010:CDS 45.0%
! TGGGTGTGATGGAGGTAATA+TGG + chr2_1:8822157-8822176 Msa0193010:CDS 45.0%
GCACAACAACCAGTATCAGT+TGG + chr2_1:8822353-8822372 Msa0193010:CDS 45.0%
ACTGCAATGCCAACTGATAC+TGG - chr2_1:8822365-8822384 None:intergenic 45.0%
GTATCAGTTGGCATTGCAGT+CGG + chr2_1:8822365-8822384 Msa0193010:CDS 45.0%
AACCATGCAGTTACTGCAGT+TGG + chr2_1:8822446-8822465 Msa0193010:CDS 45.0%
AACCAACTGCAGTAACTGCA+TGG - chr2_1:8822451-8822470 None:intergenic 45.0%
GCAGTTACTGCAGTTGGTTA+CGG + chr2_1:8822452-8822471 Msa0193010:CDS 45.0%
GGTTACGGTGTAAGTGAAGA+TGG + chr2_1:8822467-8822486 Msa0193010:CDS 45.0%
GGTAAAGATTGGGGTGAAGA+AGG + chr2_1:8822521-8822540 Msa0193010:CDS 45.0%
GACTTTCATCCTCCAAGATG+AGG + chr2_1:8821167-8821186 Msa0193010:CDS 45.0%
TACTGCAACTGACCTCATCT+TGG - chr2_1:8821182-8821201 None:intergenic 45.0%
GTTAAAGACCAAGGCAGTTG+TGG + chr2_1:8821268-8821287 Msa0193010:CDS 45.0%
AAGACATACCACAACTGCCT+TGG - chr2_1:8821279-8821298 None:intergenic 45.0%
!!! TTCTTTTTTGATGGTGGCCG+GGG - chr2_1:8821697-8821716 None:intergenic 45.0%
! TTGTTGGGCATTTTCAGTCG+TGG + chr2_1:8822046-8822065 Msa0193010:CDS 45.0%
! GGTGCTGTGAAAATCAAGAC+TGG + chr2_1:8822080-8822099 Msa0193010:CDS 45.0%
GACTGCGATGAACAGAACAA+TGG + chr2_1:8822137-8822156 Msa0193010:CDS 45.0%
GAACAGAACAATGGGTGTGA+TGG + chr2_1:8822146-8822165 Msa0193010:CDS 45.0%
! TGGGTGTGATGGAGGTAATA+TGG + chr2_1:8822157-8822176 Msa0193010:CDS 45.0%
GCACAACAACCAGTATCAGT+TGG + chr2_1:8822353-8822372 Msa0193010:CDS 45.0%
ACTGCAATGCCAACTGATAC+TGG - chr2_1:8822365-8822384 None:intergenic 45.0%
GTATCAGTTGGCATTGCAGT+CGG + chr2_1:8822365-8822384 Msa0193010:CDS 45.0%
AACCATGCAGTTACTGCAGT+TGG + chr2_1:8822446-8822465 Msa0193010:CDS 45.0%
AACCAACTGCAGTAACTGCA+TGG - chr2_1:8822451-8822470 None:intergenic 45.0%
GCAGTTACTGCAGTTGGTTA+CGG + chr2_1:8822452-8822471 Msa0193010:CDS 45.0%
GGTTACGGTGTAAGTGAAGA+TGG + chr2_1:8822467-8822486 Msa0193010:CDS 45.0%
GGTAAAGATTGGGGTGAAGA+AGG + chr2_1:8822521-8822540 Msa0193010:CDS 45.0%
!! AATAATAAATATAAACATAA+TGG + chr2_1:8821635-8821654 Msa0193010:intron 5.0%
!! AATAATAAATATAAACATAA+TGG + chr2_1:8821635-8821654 Msa0193010:intron 5.0%
TGCAACTGACCTCATCTTGG+AGG - chr2_1:8821179-8821198 None:intergenic 50.0%
CAGAACAATGGGTGTGATGG+AGG + chr2_1:8822149-8822168 Msa0193010:CDS 50.0%
TTGAGGGAAAGTGGTGAACC+AGG + chr2_1:8822557-8822576 Msa0193010:CDS 50.0%
TGCAACTGACCTCATCTTGG+AGG - chr2_1:8821179-8821198 None:intergenic 50.0%
CAGAACAATGGGTGTGATGG+AGG + chr2_1:8822149-8822168 Msa0193010:CDS 50.0%
TTGAGGGAAAGTGGTGAACC+AGG + chr2_1:8822557-8822576 Msa0193010:CDS 50.0%
TCAGTCGTGGCTGCTGTAGA+AGG + chr2_1:8822059-8822078 Msa0193010:CDS 55.0%
AGGGAAAGTGGTGAACCAGG+AGG + chr2_1:8822560-8822579 Msa0193010:CDS 55.0%
GGTGAACCAGGAGGTCAATG+TGG + chr2_1:8822569-8822588 Msa0193010:CDS 55.0%
GCAATGCCACATTGACCTCC+TGG - chr2_1:8822578-8822597 None:intergenic 55.0%
TCAGTCGTGGCTGCTGTAGA+AGG + chr2_1:8822059-8822078 Msa0193010:CDS 55.0%
AGGGAAAGTGGTGAACCAGG+AGG + chr2_1:8822560-8822579 Msa0193010:CDS 55.0%
GGTGAACCAGGAGGTCAATG+TGG + chr2_1:8822569-8822588 Msa0193010:CDS 55.0%
GCAATGCCACATTGACCTCC+TGG - chr2_1:8822578-8822597 None:intergenic 55.0%
! AAGGTCTGGGGTTCGAACCC+CGG + chr2_1:8821677-8821696 Msa0193010:intron 60.0%
! AAGGTCTGGGGTTCGAACCC+CGG + chr2_1:8821677-8821696 Msa0193010:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 8820804 8822827 8820804 ID=Msa0193010;Name=Msa0193010
chr2_1 mRNA 8820804 8822827 8820804 ID=Msa0193010-mRNA-1;Parent=Msa0193010;Name=Msa0193010-mRNA-1;_AED=0.01;_eAED=0.01;_QI=59|1|1|1|1|1|2|202|336
chr2_1 exon 8820804 8821289 8820804 ID=Msa0193010-mRNA-1:exon:4033;Parent=Msa0193010-mRNA-1
chr2_1 exon 8822042 8822827 8822042 ID=Msa0193010-mRNA-1:exon:4034;Parent=Msa0193010-mRNA-1
chr2_1 five_prime_UTR 8820804 8820862 8820804 ID=Msa0193010-mRNA-1:five_prime_utr;Parent=Msa0193010-mRNA-1
chr2_1 CDS 8820863 8821289 8820863 ID=Msa0193010-mRNA-1:cds;Parent=Msa0193010-mRNA-1
chr2_1 CDS 8822042 8822625 8822042 ID=Msa0193010-mRNA-1:cds;Parent=Msa0193010-mRNA-1
chr2_1 three_prime_UTR 8822626 8822827 8822626 ID=Msa0193010-mRNA-1:three_prime_utr;Parent=Msa0193010-mRNA-1
Gene Sequence

>Msa0193010

ATGAAGTTTTTTATTGCTGTTTGCATGATTATCTTGTGGGCATGTGCATACCCAATCATGTCAAGAACACTGTCTGAATCATCTGTTGTTGAAGCACATCAGCAATGGATGATAAAATATGGACGCACATACACAAATAGTTCCGAGTTAGAGAAACGCAAAAAGATATTTAAAGAGAATTTAGAATACATAGAGAATTTCAACAATGCTGGTAACAAGAGTTACAAGCTTGGCCTAAATCCATACTCTGATTTAACTAGTGAAGAGTTTATTGCTTCACATACTGGACTCAAAGTTTCTGACCGACTTTCATCCTCCAAGATGAGGTCAGTTGCAGTACCCTTCAACCTGAATGATGATATTCCAACAAATTTTGATTGGAGGCAACAAGGAGCTGTTACCGATGTTAAAGACCAAGGCAGTTGTGGATGTTGTTGGGCATTTTCAGTCGTGGCTGCTGTAGAAGGTGCTGTGAAAATCAAGACTGGTGAGTTGATCTCATTATCTGAGCAACAATTGGTTGACTGCGATGAACAGAACAATGGGTGTGATGGAGGTAATATGGATATTGCCTTCAAATATATAATACAAACCCAAGGTATTGTTAGTGAGACAGATTATCCATATCAAGAAGGTAGTCAGACATGCCAATTAAATGATCAAATGAAATTCGCAGCTCAAATAACAAATTTTGTAGACGTACCTGCCAATGATGAACAACAACTGCTACAAGCTGTAGCACAACAACCAGTATCAGTTGGCATTGCAGTCGGTGATGAATTTCAACATTACATGGGAGATGTTTATTCAGGAACATGTGGACAATCAATGAACCATGCAGTTACTGCAGTTGGTTACGGTGTAAGTGAAGATGGAACTAAGTATTGGTTGATTAAGAATTCTTGGGGTAAAGATTGGGGTGAAGAAGGTTACATGAAGTTGTTGAGGGAAAGTGGTGAACCAGGAGGTCAATGTGGCATTGCTGCACATGCTTCTTATCCCACCATATAA
Protein sequence

>Msa0193010

MKFFIAVCMIILWACAYPIMSRTLSESSVVEAHQQWMIKYGRTYTNSSELEKRKKIFKENLEYIENFNNAGNKSYKLGLNPYSDLTSEEFIASHTGLKVSDRLSSSKMRSVAVPFNLNDDIPTNFDWRQQGAVTDVKDQGSCGCCWAFSVVAAVEGAVKIKTGELISLSEQQLVDCDEQNNGCDGGNMDIAFKYIIQTQGIVSETDYPYQEGSQTCQLNDQMKFAAQITNFVDVPANDEQQLLQAVAQQPVSVGIAVGDEFQHYMGDVYSGTCGQSMNHAVTAVGYGVSEDGTKYWLIKNSWGKDWGEEGYMKLLRESGEPGGQCGIAAHASYPTI*