Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0736870 | XP_003616278.1 | 92.661 | 327 | 17 | 3 | 1 | 327 | 1 | 320 | 0.0 | 561 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0736870 | sp|Q9C7U7|MYB20_ARATH | 57.333 | 300 | 93 | 5 | 1 | 291 | 1 | 274 | 2.97e-102 | 304 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0736870 | G7K1N8 | 92.661 | 327 | 17 | 3 | 1 | 327 | 1 | 320 | 0.0 | 561 |
Gene ID | Type | Classification |
---|---|---|
Msa0736870 | TF | MYB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0106620 | Msa0736870 | 0.807700 | 4.447739e-50 | -8.615850e-47 |
Msa0106710 | Msa0736870 | 0.811471 | 6.886715e-51 | -8.615850e-47 |
Msa0664090 | Msa0736870 | 0.800304 | 1.534601e-48 | -8.615850e-47 |
Msa0220730 | Msa0736870 | 0.804032 | 2.624837e-49 | -8.615850e-47 |
Msa0556010 | Msa0736870 | 0.812260 | 4.635355e-51 | -8.615850e-47 |
Msa0582480 | Msa0736870 | 0.810076 | 1.379919e-50 | -8.615850e-47 |
Msa0586220 | Msa0736870 | 0.814840 | 1.255419e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0736870 | MtrunA17_Chr5g0434571 | 93.884 | 327 | 13 | 3 | 1 | 327 | 37 | 356 | 0.0 | 561 |
Msa0736870 | MtrunA17_Chr3g0110351 | 64.688 | 337 | 83 | 7 | 1 | 327 | 1 | 311 | 2.78e-131 | 376 |
Msa0736870 | MtrunA17_Chr4g0057031 | 79.470 | 151 | 30 | 1 | 1 | 150 | 1 | 151 | 4.79e-84 | 254 |
Msa0736870 | MtrunA17_Chr7g0228891 | 79.845 | 129 | 26 | 0 | 1 | 129 | 1 | 129 | 2.08e-75 | 233 |
Msa0736870 | MtrunA17_Chr4g0039971 | 72.656 | 128 | 35 | 0 | 1 | 128 | 2 | 129 | 6.08e-67 | 214 |
Msa0736870 | MtrunA17_Chr6g0453471 | 55.330 | 197 | 78 | 3 | 1 | 190 | 1 | 194 | 8.16e-67 | 213 |
Msa0736870 | MtrunA17_Chr7g0217741 | 71.094 | 128 | 37 | 0 | 1 | 128 | 1 | 128 | 1.01e-65 | 209 |
Msa0736870 | MtrunA17_Chr8g0349261 | 72.593 | 135 | 35 | 2 | 1 | 133 | 1 | 135 | 1.53e-65 | 208 |
Msa0736870 | MtrunA17_Chr3g0115821 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 5.38e-65 | 208 |
Msa0736870 | MtrunA17_Chr4g0042671 | 72.656 | 128 | 35 | 0 | 1 | 128 | 1 | 128 | 2.01e-64 | 209 |
Msa0736870 | MtrunA17_Chr5g0410961 | 69.531 | 128 | 39 | 0 | 1 | 128 | 1 | 128 | 3.65e-63 | 204 |
Msa0736870 | MtrunA17_Chr4g0037141 | 55.556 | 171 | 64 | 2 | 1 | 170 | 1 | 160 | 1.75e-62 | 200 |
Msa0736870 | MtrunA17_Chr2g0281071 | 69.767 | 129 | 38 | 1 | 1 | 128 | 1 | 129 | 3.91e-62 | 201 |
Msa0736870 | MtrunA17_Chr2g0323411 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 5.34e-62 | 200 |
Msa0736870 | MtrunA17_Chr4g0048511 | 68.992 | 129 | 39 | 1 | 1 | 128 | 1 | 129 | 1.72e-61 | 200 |
Msa0736870 | MtrunA17_Chr1g0193371 | 66.923 | 130 | 43 | 0 | 1 | 130 | 1 | 130 | 9.45e-61 | 198 |
Msa0736870 | MtrunA17_Chr3g0131121 | 65.891 | 129 | 44 | 0 | 1 | 129 | 1 | 129 | 1.05e-59 | 193 |
Msa0736870 | MtrunA17_Chr5g0395281 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.94e-59 | 193 |
Msa0736870 | MtrunA17_Chr7g0270891 | 60.690 | 145 | 57 | 0 | 1 | 145 | 1 | 145 | 2.32e-59 | 194 |
Msa0736870 | MtrunA17_Chr8g0385321 | 65.116 | 129 | 45 | 0 | 1 | 129 | 1 | 129 | 2.97e-59 | 192 |
Msa0736870 | MtrunA17_Chr3g0117091 | 65.891 | 129 | 44 | 0 | 1 | 129 | 1 | 129 | 1.15e-58 | 192 |
Msa0736870 | MtrunA17_Chr1g0193801 | 64.615 | 130 | 46 | 0 | 1 | 130 | 1 | 130 | 1.93e-58 | 192 |
Msa0736870 | MtrunA17_Chr3g0103281 | 59.184 | 147 | 60 | 0 | 1 | 147 | 1 | 147 | 3.04e-58 | 190 |
Msa0736870 | MtrunA17_Chr1g0211161 | 55.758 | 165 | 72 | 1 | 3 | 167 | 4 | 167 | 3.38e-58 | 187 |
Msa0736870 | MtrunA17_Chr4g0058631 | 66.154 | 130 | 44 | 0 | 1 | 130 | 1 | 130 | 4.18e-58 | 191 |
Msa0736870 | MtrunA17_Chr5g0435101 | 63.200 | 125 | 46 | 0 | 3 | 127 | 2 | 126 | 4.68e-57 | 184 |
Msa0736870 | MtrunA17_Chr7g0261281 | 70.690 | 116 | 34 | 0 | 1 | 116 | 1 | 116 | 1.38e-56 | 184 |
Msa0736870 | MtrunA17_Chr3g0121241 | 55.000 | 160 | 70 | 1 | 5 | 162 | 35 | 194 | 1.81e-56 | 185 |
Msa0736870 | MtrunA17_Chr7g0271241 | 66.176 | 136 | 46 | 0 | 1 | 136 | 1 | 136 | 2.30e-56 | 187 |
Msa0736870 | MtrunA17_Chr6g0452271 | 60.769 | 130 | 51 | 0 | 1 | 130 | 1 | 130 | 3.29e-55 | 183 |
Msa0736870 | MtrunA17_Chr1g0187761 | 38.380 | 284 | 139 | 5 | 1 | 283 | 1 | 249 | 5.14e-54 | 177 |
Msa0736870 | MtrunA17_Chr1g0194951 | 42.353 | 255 | 127 | 6 | 1 | 249 | 1 | 241 | 7.86e-54 | 180 |
Msa0736870 | MtrunA17_Chr2g0309911 | 61.654 | 133 | 50 | 1 | 1 | 133 | 1 | 132 | 1.24e-53 | 178 |
Msa0736870 | MtrunA17_Chr4g0068061 | 65.517 | 116 | 40 | 0 | 1 | 116 | 1 | 116 | 1.54e-53 | 179 |
Msa0736870 | MtrunA17_Chr7g0274581 | 63.559 | 118 | 43 | 0 | 1 | 118 | 1 | 118 | 1.64e-53 | 174 |
Msa0736870 | MtrunA17_Chr7g0275911 | 64.103 | 117 | 42 | 0 | 1 | 117 | 1 | 117 | 5.73e-53 | 174 |
Msa0736870 | MtrunA17_Chr1g0203411 | 61.864 | 118 | 45 | 0 | 1 | 118 | 1 | 118 | 1.49e-52 | 175 |
Msa0736870 | MtrunA17_Chr3g0092401 | 63.866 | 119 | 43 | 0 | 1 | 119 | 2 | 120 | 1.50e-52 | 175 |
Msa0736870 | MtrunA17_Chr7g0217221 | 67.797 | 118 | 38 | 0 | 1 | 118 | 1 | 118 | 1.71e-52 | 174 |
Msa0736870 | MtrunA17_Chr4g0060721 | 62.712 | 118 | 44 | 0 | 1 | 118 | 2 | 119 | 3.29e-52 | 175 |
Msa0736870 | MtrunA17_Chr8g0346561 | 62.712 | 118 | 44 | 0 | 1 | 118 | 1 | 118 | 6.31e-52 | 173 |
Msa0736870 | MtrunA17_Chr4g0044421 | 64.000 | 125 | 44 | 1 | 3 | 126 | 2 | 126 | 6.45e-52 | 170 |
Msa0736870 | MtrunA17_Chr8g0342521 | 62.602 | 123 | 46 | 0 | 1 | 123 | 1 | 123 | 6.46e-52 | 174 |
Msa0736870 | MtrunA17_Chr1g0167691 | 65.517 | 116 | 40 | 0 | 1 | 116 | 1 | 116 | 1.32e-51 | 171 |
Msa0736870 | MtrunA17_Chr1g0167661 | 66.379 | 116 | 39 | 0 | 1 | 116 | 1 | 116 | 1.37e-51 | 171 |
Msa0736870 | MtrunA17_Chr2g0330041 | 61.600 | 125 | 48 | 0 | 1 | 125 | 1 | 125 | 1.44e-51 | 175 |
Msa0736870 | MtrunA17_Chr8g0342541 | 61.789 | 123 | 47 | 0 | 1 | 123 | 1 | 123 | 8.04e-51 | 172 |
Msa0736870 | MtrunA17_Chr7g0254411 | 62.400 | 125 | 45 | 1 | 1 | 123 | 1 | 125 | 1.17e-50 | 171 |
Msa0736870 | MtrunA17_Chr8g0387421 | 61.864 | 118 | 45 | 0 | 1 | 118 | 1 | 118 | 2.69e-50 | 169 |
Msa0736870 | MtrunA17_Chr7g0269831 | 68.103 | 116 | 37 | 0 | 1 | 116 | 1 | 116 | 4.60e-50 | 170 |
Msa0736870 | MtrunA17_Chr8g0342481 | 64.103 | 117 | 41 | 1 | 1 | 116 | 1 | 117 | 5.89e-50 | 171 |
Msa0736870 | MtrunA17_Chr4g0070611 | 63.025 | 119 | 44 | 0 | 1 | 119 | 1 | 119 | 2.35e-49 | 167 |
Msa0736870 | MtrunA17_Chr4g0022901 | 62.069 | 116 | 43 | 1 | 1 | 115 | 1 | 116 | 5.52e-49 | 165 |
Msa0736870 | MtrunA17_Chr2g0311221 | 67.273 | 110 | 36 | 0 | 2 | 111 | 4 | 113 | 6.73e-49 | 166 |
Msa0736870 | MtrunA17_Chr4g0022911 | 60.345 | 116 | 45 | 1 | 1 | 115 | 1 | 116 | 8.04e-49 | 165 |
Msa0736870 | MtrunA17_Chr4g0022931 | 58.400 | 125 | 51 | 1 | 1 | 124 | 1 | 125 | 8.46e-49 | 164 |
Msa0736870 | MtrunA17_Chr2g0323351 | 63.559 | 118 | 43 | 0 | 1 | 118 | 1 | 118 | 8.99e-49 | 163 |
Msa0736870 | MtrunA17_Chr4g0070641 | 63.025 | 119 | 44 | 0 | 1 | 119 | 1 | 119 | 1.18e-48 | 160 |
Msa0736870 | MtrunA17_Chr5g0417821 | 62.185 | 119 | 45 | 0 | 10 | 128 | 5 | 123 | 3.54e-48 | 163 |
Msa0736870 | MtrunA17_Chr1g0151941 | 39.056 | 233 | 128 | 6 | 1 | 220 | 1 | 232 | 9.19e-48 | 161 |
Msa0736870 | MtrunA17_Chr4g0032401 | 64.865 | 111 | 39 | 0 | 12 | 122 | 17 | 127 | 2.34e-47 | 162 |
Msa0736870 | MtrunA17_Chr6g0453211 | 63.964 | 111 | 40 | 0 | 1 | 111 | 1 | 111 | 4.03e-47 | 161 |
Msa0736870 | MtrunA17_Chr5g0397231 | 61.818 | 110 | 42 | 0 | 1 | 110 | 1 | 110 | 4.97e-47 | 162 |
Msa0736870 | MtrunA17_Chr2g0328771 | 64.815 | 108 | 38 | 0 | 12 | 119 | 20 | 127 | 1.45e-46 | 160 |
Msa0736870 | MtrunA17_Chr5g0400821 | 59.829 | 117 | 46 | 1 | 1 | 116 | 1 | 117 | 8.20e-45 | 155 |
Msa0736870 | MtrunA17_Chr4g0028311 | 53.906 | 128 | 58 | 1 | 1 | 127 | 1 | 128 | 1.12e-44 | 155 |
Msa0736870 | MtrunA17_Chr7g0247131 | 76.136 | 88 | 21 | 0 | 43 | 130 | 9 | 96 | 1.50e-44 | 153 |
Msa0736870 | MtrunA17_Chr1g0152011 | 59.829 | 117 | 46 | 1 | 1 | 116 | 1 | 117 | 1.91e-44 | 155 |
Msa0736870 | MtrunA17_Chr3g0088461 | 61.818 | 110 | 42 | 0 | 8 | 117 | 18 | 127 | 2.52e-44 | 154 |
Msa0736870 | MtrunA17_Chr7g0264641 | 57.500 | 120 | 50 | 1 | 1 | 119 | 1 | 120 | 2.83e-44 | 152 |
Msa0736870 | MtrunA17_Chr6g0470971 | 52.113 | 142 | 65 | 2 | 1 | 140 | 1 | 141 | 7.77e-44 | 152 |
Msa0736870 | MtrunA17_Chr4g0022881 | 57.895 | 114 | 48 | 0 | 1 | 114 | 1 | 114 | 1.12e-43 | 150 |
Msa0736870 | MtrunA17_Chr1g0168661 | 63.810 | 105 | 38 | 0 | 13 | 117 | 22 | 126 | 1.26e-43 | 150 |
Msa0736870 | MtrunA17_Chr4g0022891 | 49.324 | 148 | 71 | 1 | 1 | 144 | 1 | 148 | 2.60e-43 | 149 |
Msa0736870 | MtrunA17_Chr1g0203441 | 58.824 | 119 | 48 | 1 | 1 | 118 | 1 | 119 | 3.13e-43 | 150 |
Msa0736870 | MtrunA17_Chr7g0228231 | 60.748 | 107 | 42 | 0 | 12 | 118 | 14 | 120 | 4.94e-43 | 147 |
Msa0736870 | MtrunA17_Chr8g0354661 | 61.321 | 106 | 41 | 0 | 10 | 115 | 35 | 140 | 7.90e-43 | 155 |
Msa0736870 | MtrunA17_Chr1g0186061 | 61.905 | 105 | 40 | 0 | 13 | 117 | 21 | 125 | 1.38e-42 | 147 |
Msa0736870 | MtrunA17_Chr6g0450101 | 55.372 | 121 | 52 | 1 | 1 | 119 | 1 | 121 | 1.77e-42 | 146 |
Msa0736870 | MtrunA17_Chr3g0135311 | 57.265 | 117 | 49 | 1 | 1 | 116 | 1 | 117 | 2.12e-42 | 150 |
Msa0736870 | MtrunA17_Chr2g0327351 | 58.559 | 111 | 45 | 1 | 1 | 110 | 1 | 111 | 4.05e-42 | 148 |
Msa0736870 | MtrunA17_Chr1g0209661 | 55.856 | 111 | 49 | 0 | 12 | 122 | 27 | 137 | 1.41e-41 | 147 |
Msa0736870 | MtrunA17_Chr1g0194291 | 54.783 | 115 | 52 | 0 | 8 | 122 | 17 | 131 | 1.60e-41 | 145 |
Msa0736870 | MtrunA17_Chr4g0072751 | 58.559 | 111 | 45 | 1 | 1 | 110 | 1 | 111 | 2.49e-41 | 147 |
Msa0736870 | MtrunA17_Chr4g0054391 | 59.091 | 110 | 44 | 1 | 1 | 109 | 1 | 110 | 5.53e-41 | 144 |
Msa0736870 | MtrunA17_Chr3g0099131 | 58.879 | 107 | 44 | 0 | 12 | 118 | 41 | 147 | 5.67e-41 | 150 |
Msa0736870 | MtrunA17_Chr1g0194301 | 52.174 | 115 | 55 | 0 | 8 | 122 | 29 | 143 | 6.15e-40 | 141 |
Msa0736870 | MtrunA17_Chr3g0080861 | 55.556 | 108 | 48 | 0 | 10 | 117 | 35 | 142 | 9.83e-40 | 146 |
Msa0736870 | MtrunA17_Chr2g0327821 | 55.660 | 106 | 47 | 0 | 12 | 117 | 6 | 111 | 2.40e-39 | 139 |
Msa0736870 | MtrunA17_Chr6g0487491 | 52.419 | 124 | 50 | 2 | 1 | 115 | 1 | 124 | 5.56e-39 | 138 |
Msa0736870 | MtrunA17_Chr1g0180391 | 52.632 | 114 | 54 | 0 | 4 | 117 | 11 | 124 | 3.87e-38 | 135 |
Msa0736870 | MtrunA17_Chr4g0055981 | 55.556 | 117 | 52 | 0 | 9 | 125 | 52 | 168 | 6.97e-38 | 134 |
Msa0736870 | MtrunA17_Chr1g0154031 | 44.512 | 164 | 82 | 3 | 12 | 172 | 76 | 233 | 7.28e-38 | 139 |
Msa0736870 | MtrunA17_Chr2g0293911 | 53.043 | 115 | 54 | 0 | 8 | 122 | 20 | 134 | 1.91e-37 | 136 |
Msa0736870 | MtrunA17_Chr2g0294811 | 67.045 | 88 | 29 | 0 | 1 | 88 | 1 | 88 | 1.91e-37 | 130 |
Msa0736870 | MtrunA17_Chr4g0030881 | 55.455 | 110 | 42 | 1 | 13 | 115 | 8 | 117 | 2.46e-37 | 134 |
Msa0736870 | MtrunA17_Chr8g0343831 | 57.944 | 107 | 45 | 0 | 12 | 118 | 8 | 114 | 2.76e-37 | 134 |
Msa0736870 | MtrunA17_Chr4g0068921 | 53.043 | 115 | 54 | 0 | 8 | 122 | 20 | 134 | 3.65e-37 | 132 |
Msa0736870 | MtrunA17_Chr2g0322521 | 57.798 | 109 | 46 | 0 | 9 | 117 | 26 | 134 | 7.96e-37 | 136 |
Msa0736870 | MtrunA17_Chr4g0042611 | 67.045 | 88 | 29 | 0 | 1 | 88 | 1 | 88 | 3.28e-36 | 125 |
Msa0736870 | MtrunA17_Chr7g0240821 | 35.714 | 224 | 126 | 4 | 16 | 238 | 5 | 211 | 1.37e-35 | 129 |
Msa0736870 | MtrunA17_Chr8g0342461 | 61.111 | 90 | 34 | 1 | 1 | 89 | 1 | 90 | 8.79e-34 | 121 |
Msa0736870 | MtrunA17_Chr5g0434931 | 54.717 | 106 | 48 | 0 | 11 | 116 | 34 | 139 | 9.36e-34 | 125 |
Msa0736870 | MtrunA17_Chr8g0342511 | 60.920 | 87 | 34 | 0 | 1 | 87 | 1 | 87 | 1.11e-33 | 119 |
Msa0736870 | MtrunA17_Chr5g0434911 | 52.727 | 110 | 52 | 0 | 7 | 116 | 16 | 125 | 1.15e-33 | 125 |
Msa0736870 | MtrunA17_Chr8g0342471 | 61.111 | 90 | 34 | 1 | 1 | 89 | 1 | 90 | 2.14e-33 | 120 |
Msa0736870 | MtrunA17_Chr5g0440781 | 44.286 | 140 | 74 | 3 | 13 | 149 | 13 | 151 | 3.73e-33 | 121 |
Msa0736870 | MtrunA17_Chr8g0342531 | 59.551 | 89 | 36 | 0 | 1 | 89 | 1 | 89 | 4.49e-33 | 120 |
Msa0736870 | MtrunA17_Chr7g0220341 | 54.128 | 109 | 48 | 1 | 10 | 116 | 23 | 131 | 6.87e-33 | 122 |
Msa0736870 | MtrunA17_Chr5g0440761 | 44.286 | 140 | 74 | 3 | 13 | 149 | 13 | 151 | 1.57e-32 | 121 |
Msa0736870 | MtrunA17_Chr5g0441141 | 44.286 | 140 | 74 | 3 | 13 | 149 | 13 | 151 | 1.72e-32 | 122 |
Msa0736870 | MtrunA17_Chr5g0434831 | 54.717 | 106 | 48 | 0 | 11 | 116 | 6 | 111 | 3.57e-32 | 118 |
Msa0736870 | MtrunA17_Chr7g0228991 | 53.774 | 106 | 49 | 0 | 11 | 116 | 28 | 133 | 2.12e-31 | 119 |
Msa0736870 | MtrunA17_Chr1g0192411 | 49.091 | 110 | 56 | 0 | 8 | 117 | 8 | 117 | 3.40e-31 | 121 |
Msa0736870 | MtrunA17_Chr8g0360111 | 53.922 | 102 | 47 | 0 | 11 | 112 | 24 | 125 | 7.79e-31 | 117 |
Msa0736870 | MtrunA17_Chr5g0434841 | 52.830 | 106 | 50 | 0 | 11 | 116 | 19 | 124 | 1.74e-30 | 117 |
Msa0736870 | MtrunA17_Chr5g0395221 | 59.524 | 84 | 34 | 0 | 5 | 88 | 5 | 88 | 1.75e-30 | 110 |
Msa0736870 | MtrunA17_Chr3g0099141 | 55.172 | 87 | 39 | 0 | 8 | 94 | 36 | 122 | 2.04e-30 | 112 |
Msa0736870 | MtrunA17_Chr2g0323321 | 57.609 | 92 | 38 | 1 | 1 | 92 | 1 | 91 | 2.64e-30 | 111 |
Msa0736870 | MtrunA17_Chr3g0093811 | 54.545 | 88 | 40 | 0 | 43 | 130 | 13 | 100 | 2.68e-29 | 113 |
Msa0736870 | MtrunA17_Chr5g0429661 | 51.429 | 105 | 48 | 2 | 12 | 115 | 120 | 222 | 1.27e-28 | 113 |
Msa0736870 | MtrunA17_Chr5g0441131 | 48.276 | 116 | 58 | 2 | 10 | 124 | 7 | 121 | 2.14e-28 | 108 |
Msa0736870 | MtrunA17_Chr8g0334881 | 48.148 | 108 | 55 | 1 | 8 | 114 | 6 | 113 | 2.94e-28 | 111 |
Msa0736870 | MtrunA17_Chr4g0013361 | 49.038 | 104 | 52 | 1 | 12 | 114 | 10 | 113 | 3.77e-28 | 110 |
Msa0736870 | MtrunA17_Chr3g0133601 | 47.222 | 108 | 54 | 2 | 14 | 120 | 37 | 142 | 2.06e-26 | 104 |
Msa0736870 | MtrunA17_Chr3g0117511 | 44.144 | 111 | 59 | 2 | 9 | 118 | 178 | 286 | 1.22e-25 | 106 |
Msa0736870 | MtrunA17_Chr6g0480581 | 39.456 | 147 | 80 | 4 | 14 | 155 | 4 | 146 | 1.93e-25 | 102 |
Msa0736870 | MtrunA17_Chr6g0454921 | 39.286 | 140 | 77 | 3 | 14 | 152 | 15 | 147 | 2.87e-25 | 100 |
Msa0736870 | MtrunA17_Chr4g0058991 | 45.045 | 111 | 58 | 2 | 9 | 118 | 204 | 312 | 4.13e-25 | 105 |
Msa0736870 | MtrunA17_Chr4g0008551 | 42.623 | 122 | 63 | 3 | 14 | 134 | 38 | 153 | 4.31e-25 | 103 |
Msa0736870 | MtrunA17_Chr4g0053431 | 47.170 | 106 | 47 | 2 | 14 | 115 | 5 | 105 | 7.99e-25 | 101 |
Msa0736870 | MtrunA17_Chr5g0401731 | 43.333 | 120 | 65 | 2 | 14 | 132 | 15 | 132 | 1.95e-24 | 101 |
Msa0736870 | MtrunA17_Chr7g0238631 | 49.057 | 106 | 51 | 2 | 12 | 116 | 111 | 214 | 2.00e-24 | 103 |
Msa0736870 | MtrunA17_Chr7g0238631 | 33.019 | 106 | 69 | 2 | 14 | 118 | 61 | 165 | 5.38e-11 | 63.5 |
Msa0736870 | MtrunA17_Chr3g0139671 | 44.340 | 106 | 56 | 2 | 12 | 116 | 83 | 186 | 9.18e-23 | 99.4 |
Msa0736870 | MtrunA17_Chr6g0453751 | 50.000 | 92 | 37 | 2 | 11 | 93 | 19 | 110 | 1.53e-22 | 91.3 |
Msa0736870 | MtrunA17_Chr7g0229101 | 57.746 | 71 | 30 | 0 | 43 | 113 | 3 | 73 | 4.82e-22 | 92.4 |
Msa0736870 | MtrunA17_Chr7g0228531 | 44.762 | 105 | 56 | 2 | 14 | 118 | 220 | 322 | 1.70e-21 | 94.4 |
Msa0736870 | MtrunA17_Chr1g0157731 | 44.340 | 106 | 56 | 2 | 12 | 116 | 89 | 192 | 2.60e-21 | 95.1 |
Msa0736870 | MtrunA17_Chr6g0460661 | 41.739 | 115 | 63 | 3 | 14 | 127 | 16 | 127 | 3.85e-21 | 88.6 |
Msa0736870 | MtrunA17_Chr7g0229131 | 52.703 | 74 | 35 | 0 | 43 | 116 | 3 | 76 | 3.91e-21 | 89.0 |
Msa0736870 | MtrunA17_Chr5g0437321 | 43.396 | 106 | 54 | 3 | 8 | 112 | 16 | 116 | 5.90e-21 | 90.9 |
Msa0736870 | MtrunA17_Chr5g0425591 | 49.412 | 85 | 42 | 1 | 10 | 93 | 7 | 91 | 6.42e-21 | 85.9 |
Msa0736870 | MtrunA17_Chr7g0233061 | 43.925 | 107 | 50 | 4 | 14 | 117 | 180 | 279 | 2.60e-20 | 90.5 |
Msa0736870 | MtrunA17_Chr5g0434901 | 56.061 | 66 | 29 | 0 | 48 | 113 | 9 | 74 | 3.45e-20 | 84.7 |
Msa0736870 | MtrunA17_Chr5g0417621 | 41.509 | 106 | 59 | 2 | 14 | 118 | 134 | 237 | 1.55e-19 | 89.0 |
Msa0736870 | MtrunA17_Chr4g0042501 | 41.509 | 106 | 59 | 2 | 14 | 118 | 105 | 208 | 1.73e-19 | 88.6 |
Msa0736870 | MtrunA17_Chr5g0397841 | 45.455 | 99 | 51 | 2 | 12 | 109 | 108 | 204 | 3.10e-18 | 85.1 |
Msa0736870 | MtrunA17_Chr1g0177901 | 37.008 | 127 | 70 | 3 | 25 | 143 | 5 | 129 | 3.95e-18 | 81.6 |
Msa0736870 | MtrunA17_Chr5g0395231 | 64.706 | 51 | 18 | 0 | 78 | 128 | 5 | 55 | 9.00e-18 | 81.3 |
Msa0736870 | MtrunA17_Chr7g0228481 | 40.909 | 110 | 60 | 3 | 14 | 120 | 220 | 327 | 1.81e-17 | 82.8 |
Msa0736870 | MtrunA17_Chr7g0228401 | 34.711 | 121 | 48 | 2 | 17 | 110 | 258 | 374 | 2.24e-17 | 82.8 |
Msa0736870 | MtrunA17_Chr6g0460671 | 39.252 | 107 | 62 | 2 | 14 | 119 | 99 | 203 | 2.91e-17 | 81.6 |
Msa0736870 | MtrunA17_Chr3g0125801 | 41.905 | 105 | 58 | 2 | 14 | 117 | 16 | 118 | 9.74e-17 | 79.3 |
Msa0736870 | MtrunA17_Chr7g0238651 | 37.931 | 116 | 64 | 2 | 17 | 124 | 10 | 125 | 1.45e-16 | 79.7 |
Msa0736870 | MtrunA17_Chr7g0254261 | 37.500 | 128 | 73 | 3 | 9 | 131 | 80 | 205 | 2.92e-16 | 78.6 |
Msa0736870 | MtrunA17_Chr7g0247141 | 62.500 | 48 | 17 | 1 | 1 | 47 | 1 | 48 | 4.90e-16 | 71.6 |
Msa0736870 | MtrunA17_Chr4g0042621 | 75.000 | 40 | 10 | 0 | 89 | 128 | 15 | 54 | 3.05e-14 | 72.4 |
Msa0736870 | MtrunA17_Chr5g0416341 | 37.624 | 101 | 62 | 1 | 17 | 117 | 29 | 128 | 8.21e-13 | 68.9 |
Msa0736870 | MtrunA17_Chr3g0145551 | 65.909 | 44 | 15 | 0 | 92 | 135 | 2 | 45 | 1.11e-12 | 63.2 |
Msa0736870 | MtrunA17_Chr5g0434871 | 58.140 | 43 | 18 | 0 | 74 | 116 | 2 | 44 | 6.18e-12 | 60.5 |
Msa0736870 | MtrunA17_Chr1g0193901 | 45.238 | 84 | 44 | 2 | 12 | 93 | 11 | 94 | 6.52e-12 | 61.6 |
Msa0736870 | MtrunA17_Chr1g0193891 | 45.238 | 84 | 44 | 2 | 12 | 93 | 11 | 94 | 6.52e-12 | 61.6 |
Msa0736870 | MtrunA17_Chr1g0193871 | 45.238 | 84 | 44 | 2 | 12 | 93 | 11 | 94 | 6.52e-12 | 61.6 |
Msa0736870 | MtrunA17_Chr1g0193881 | 45.238 | 84 | 44 | 2 | 12 | 93 | 11 | 94 | 6.52e-12 | 61.6 |
Msa0736870 | MtrunA17_Chr3g0104491 | 40.299 | 67 | 36 | 1 | 53 | 115 | 1 | 67 | 3.65e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0736870 | AT1G66230.1 | 57.333 | 300 | 93 | 5 | 1 | 291 | 1 | 274 | 3.02e-103 | 304 |
Msa0736870 | AT5G16600.1 | 46.196 | 368 | 116 | 5 | 1 | 327 | 1 | 327 | 5.35e-102 | 303 |
Msa0736870 | AT4G22680.1 | 86.822 | 129 | 17 | 0 | 1 | 129 | 1 | 129 | 1.45e-81 | 248 |
Msa0736870 | AT4G12350.1 | 86.047 | 129 | 18 | 0 | 1 | 129 | 1 | 129 | 9.57e-80 | 244 |
Msa0736870 | AT5G14340.1 | 75.194 | 129 | 32 | 0 | 1 | 129 | 13 | 141 | 9.17e-71 | 221 |
Msa0736870 | AT5G62320.1 | 72.180 | 133 | 30 | 1 | 2 | 127 | 3 | 135 | 5.88e-67 | 210 |
Msa0736870 | AT3G02940.2 | 71.875 | 128 | 36 | 0 | 1 | 128 | 1 | 128 | 1.80e-66 | 211 |
Msa0736870 | AT3G02940.1 | 71.875 | 128 | 36 | 0 | 1 | 128 | 1 | 128 | 3.98e-66 | 211 |
Msa0736870 | AT3G02940.3 | 71.875 | 128 | 36 | 0 | 1 | 128 | 1 | 128 | 3.98e-66 | 211 |
Msa0736870 | AT3G61250.1 | 57.738 | 168 | 64 | 1 | 1 | 168 | 1 | 161 | 6.28e-66 | 209 |
Msa0736870 | AT5G15310.1 | 71.094 | 128 | 37 | 0 | 1 | 128 | 1 | 128 | 2.77e-65 | 209 |
Msa0736870 | AT5G15310.2 | 71.094 | 128 | 37 | 0 | 1 | 128 | 1 | 128 | 3.35e-65 | 208 |
Msa0736870 | AT5G15310.4 | 71.094 | 128 | 37 | 0 | 1 | 128 | 1 | 128 | 4.40e-65 | 206 |
Msa0736870 | AT4G28110.1 | 69.531 | 128 | 39 | 0 | 1 | 128 | 1 | 128 | 1.01e-64 | 206 |
Msa0736870 | AT5G16770.4 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 1.38e-64 | 207 |
Msa0736870 | AT5G16770.3 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 1.38e-64 | 207 |
Msa0736870 | AT3G01140.2 | 66.197 | 142 | 46 | 1 | 1 | 140 | 1 | 142 | 1.86e-64 | 207 |
Msa0736870 | AT5G16770.1 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 3.76e-64 | 206 |
Msa0736870 | AT5G16770.2 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 3.76e-64 | 206 |
Msa0736870 | AT1G34670.1 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 1.76e-63 | 205 |
Msa0736870 | AT5G65230.1 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 4.58e-63 | 202 |
Msa0736870 | AT4G21440.1 | 52.406 | 187 | 79 | 1 | 1 | 177 | 1 | 187 | 5.42e-63 | 204 |
Msa0736870 | AT5G10280.1 | 56.805 | 169 | 67 | 2 | 1 | 168 | 1 | 164 | 7.38e-63 | 203 |
Msa0736870 | AT4G38620.1 | 48.341 | 211 | 98 | 3 | 1 | 211 | 1 | 200 | 9.15e-63 | 201 |
Msa0736870 | AT4G05100.1 | 68.992 | 129 | 39 | 1 | 1 | 128 | 1 | 129 | 1.45e-61 | 199 |
Msa0736870 | AT5G26660.1 | 68.217 | 129 | 41 | 0 | 1 | 129 | 1 | 129 | 1.75e-61 | 200 |
Msa0736870 | AT3G01140.1 | 65.942 | 138 | 45 | 1 | 5 | 140 | 48 | 185 | 3.18e-61 | 200 |
Msa0736870 | AT5G61420.2 | 62.411 | 141 | 53 | 0 | 1 | 141 | 1 | 141 | 5.29e-61 | 199 |
Msa0736870 | AT4G17785.2 | 68.217 | 129 | 40 | 1 | 1 | 128 | 1 | 129 | 1.01e-60 | 198 |
Msa0736870 | AT4G17785.1 | 68.217 | 129 | 40 | 1 | 1 | 128 | 1 | 129 | 1.39e-60 | 198 |
Msa0736870 | AT1G57560.1 | 67.692 | 130 | 42 | 0 | 1 | 130 | 1 | 130 | 1.83e-60 | 196 |
Msa0736870 | AT1G57560.2 | 67.692 | 130 | 42 | 0 | 1 | 130 | 1 | 130 | 3.18e-60 | 194 |
Msa0736870 | AT1G18570.1 | 60.959 | 146 | 54 | 2 | 1 | 145 | 1 | 144 | 1.04e-59 | 195 |
Msa0736870 | AT1G09540.1 | 67.692 | 130 | 42 | 0 | 1 | 130 | 1 | 130 | 2.52e-59 | 195 |
Msa0736870 | AT4G09460.1 | 63.566 | 129 | 47 | 0 | 1 | 129 | 1 | 129 | 7.77e-59 | 189 |
Msa0736870 | AT2G16720.1 | 61.029 | 136 | 53 | 0 | 1 | 136 | 1 | 136 | 9.31e-59 | 190 |
Msa0736870 | AT5G07700.1 | 63.910 | 133 | 48 | 0 | 1 | 133 | 1 | 133 | 2.70e-58 | 191 |
Msa0736870 | AT5G07700.2 | 63.910 | 133 | 48 | 0 | 1 | 133 | 1 | 133 | 2.70e-58 | 191 |
Msa0736870 | AT4G01680.3 | 58.333 | 156 | 56 | 2 | 1 | 155 | 1 | 148 | 4.76e-58 | 187 |
Msa0736870 | AT1G06180.1 | 71.552 | 116 | 33 | 0 | 1 | 116 | 1 | 116 | 6.16e-58 | 187 |
Msa0736870 | AT5G07690.1 | 37.651 | 332 | 179 | 7 | 1 | 312 | 1 | 324 | 1.06e-57 | 189 |
Msa0736870 | AT4G01680.1 | 58.333 | 156 | 56 | 2 | 1 | 155 | 1 | 148 | 1.58e-57 | 189 |
Msa0736870 | AT3G13540.1 | 55.844 | 154 | 56 | 1 | 5 | 158 | 16 | 157 | 2.18e-57 | 186 |
Msa0736870 | AT4G34990.1 | 63.566 | 129 | 47 | 0 | 1 | 129 | 1 | 129 | 3.88e-57 | 186 |
Msa0736870 | AT1G74080.1 | 55.828 | 163 | 70 | 1 | 1 | 161 | 1 | 163 | 3.95e-57 | 188 |
Msa0736870 | AT5G56110.1 | 63.846 | 130 | 47 | 0 | 1 | 130 | 1 | 130 | 7.85e-57 | 187 |
Msa0736870 | AT1G22640.1 | 62.992 | 127 | 47 | 0 | 1 | 127 | 1 | 127 | 9.76e-57 | 184 |
Msa0736870 | AT1G35515.1 | 50.867 | 173 | 73 | 2 | 1 | 173 | 1 | 161 | 1.32e-56 | 183 |
Msa0736870 | AT5G54230.1 | 66.406 | 128 | 43 | 0 | 1 | 128 | 1 | 128 | 1.94e-56 | 186 |
Msa0736870 | AT3G23250.1 | 57.823 | 147 | 50 | 1 | 1 | 135 | 1 | 147 | 5.25e-56 | 184 |
Msa0736870 | AT2G31180.1 | 67.797 | 118 | 38 | 0 | 1 | 118 | 1 | 118 | 1.05e-55 | 182 |
Msa0736870 | AT5G60890.1 | 58.741 | 143 | 56 | 1 | 1 | 143 | 1 | 140 | 2.52e-55 | 182 |
Msa0736870 | AT3G47600.1 | 67.227 | 119 | 39 | 0 | 1 | 119 | 1 | 119 | 7.47e-55 | 182 |
Msa0736870 | AT4G01680.2 | 54.167 | 168 | 56 | 3 | 1 | 155 | 1 | 160 | 4.28e-54 | 181 |
Msa0736870 | AT5G49330.1 | 66.379 | 116 | 39 | 0 | 1 | 116 | 1 | 116 | 9.48e-54 | 179 |
Msa0736870 | AT3G12720.1 | 40.873 | 252 | 123 | 5 | 1 | 230 | 12 | 259 | 2.17e-53 | 177 |
Msa0736870 | AT1G16490.1 | 67.826 | 115 | 37 | 0 | 2 | 116 | 4 | 118 | 2.33e-53 | 176 |
Msa0736870 | AT2G47460.1 | 67.241 | 116 | 38 | 0 | 1 | 116 | 1 | 116 | 7.28e-53 | 178 |
Msa0736870 | AT5G62470.2 | 64.706 | 119 | 42 | 0 | 1 | 119 | 1 | 119 | 7.66e-53 | 177 |
Msa0736870 | AT1G08810.1 | 63.934 | 122 | 44 | 0 | 1 | 122 | 1 | 122 | 1.30e-52 | 175 |
Msa0736870 | AT3G28910.1 | 65.574 | 122 | 42 | 0 | 1 | 122 | 1 | 122 | 2.37e-52 | 175 |
Msa0736870 | AT1G56160.1 | 67.826 | 115 | 37 | 0 | 2 | 116 | 4 | 118 | 3.54e-52 | 174 |
Msa0736870 | AT3G62610.1 | 65.517 | 116 | 40 | 0 | 1 | 116 | 1 | 116 | 3.61e-52 | 176 |
Msa0736870 | AT3G28470.1 | 62.308 | 130 | 49 | 0 | 1 | 130 | 1 | 130 | 6.56e-52 | 174 |
Msa0736870 | AT1G79180.1 | 65.812 | 117 | 40 | 0 | 2 | 118 | 4 | 120 | 7.98e-52 | 173 |
Msa0736870 | AT5G62470.1 | 64.706 | 119 | 41 | 1 | 1 | 119 | 1 | 118 | 2.32e-51 | 174 |
Msa0736870 | AT1G74650.1 | 64.706 | 119 | 42 | 0 | 1 | 119 | 1 | 119 | 4.10e-51 | 172 |
Msa0736870 | AT3G13890.2 | 53.165 | 158 | 72 | 1 | 1 | 158 | 1 | 156 | 7.11e-51 | 172 |
Msa0736870 | AT1G63910.1 | 59.375 | 128 | 52 | 0 | 1 | 128 | 1 | 128 | 9.41e-51 | 172 |
Msa0736870 | AT3G12820.1 | 65.517 | 116 | 40 | 0 | 3 | 118 | 5 | 120 | 2.13e-50 | 167 |
Msa0736870 | AT1G74430.1 | 60.156 | 128 | 51 | 0 | 1 | 128 | 1 | 128 | 1.28e-49 | 167 |
Msa0736870 | AT1G18710.1 | 57.364 | 129 | 55 | 0 | 1 | 129 | 1 | 129 | 4.92e-49 | 165 |
Msa0736870 | AT3G13890.1 | 50.299 | 167 | 72 | 2 | 1 | 158 | 1 | 165 | 9.43e-48 | 164 |
Msa0736870 | AT5G12870.1 | 67.593 | 108 | 35 | 0 | 12 | 119 | 18 | 125 | 3.07e-47 | 161 |
Msa0736870 | AT3G08500.1 | 64.545 | 110 | 39 | 0 | 8 | 117 | 26 | 135 | 3.63e-45 | 157 |
Msa0736870 | AT1G79180.2 | 51.333 | 150 | 40 | 1 | 2 | 118 | 4 | 153 | 5.09e-45 | 156 |
Msa0736870 | AT3G01530.1 | 52.632 | 133 | 61 | 1 | 12 | 144 | 25 | 155 | 1.34e-44 | 152 |
Msa0736870 | AT3G24310.1 | 64.486 | 107 | 38 | 0 | 11 | 117 | 17 | 123 | 1.70e-44 | 153 |
Msa0736870 | AT3G49690.1 | 59.829 | 117 | 46 | 1 | 1 | 116 | 1 | 117 | 2.29e-44 | 154 |
Msa0736870 | AT5G23000.1 | 58.974 | 117 | 47 | 1 | 1 | 116 | 1 | 117 | 2.38e-44 | 155 |
Msa0736870 | AT4G13480.1 | 65.714 | 105 | 36 | 0 | 13 | 117 | 7 | 111 | 2.41e-44 | 152 |
Msa0736870 | AT5G65790.1 | 58.974 | 117 | 47 | 1 | 1 | 116 | 1 | 117 | 3.63e-44 | 155 |
Msa0736870 | AT5G57620.1 | 58.974 | 117 | 47 | 1 | 1 | 116 | 1 | 117 | 3.82e-44 | 154 |
Msa0736870 | AT2G36890.1 | 54.135 | 133 | 59 | 2 | 1 | 132 | 1 | 132 | 7.32e-44 | 152 |
Msa0736870 | AT2G36890.2 | 54.135 | 133 | 59 | 2 | 1 | 132 | 42 | 173 | 1.16e-43 | 153 |
Msa0736870 | AT5G14750.1 | 39.806 | 206 | 104 | 5 | 13 | 217 | 17 | 203 | 4.72e-43 | 147 |
Msa0736870 | AT4G37780.1 | 56.410 | 117 | 50 | 1 | 1 | 116 | 1 | 117 | 9.86e-43 | 150 |
Msa0736870 | AT5G40350.1 | 59.633 | 109 | 44 | 0 | 12 | 120 | 17 | 125 | 2.51e-42 | 146 |
Msa0736870 | AT3G27810.1 | 59.813 | 107 | 43 | 0 | 12 | 118 | 20 | 126 | 4.00e-42 | 146 |
Msa0736870 | AT2G32460.2 | 57.265 | 117 | 49 | 1 | 11 | 127 | 5 | 120 | 4.55e-42 | 152 |
Msa0736870 | AT2G32460.1 | 57.265 | 117 | 49 | 1 | 11 | 127 | 17 | 132 | 5.26e-42 | 152 |
Msa0736870 | AT5G06100.1 | 56.364 | 110 | 48 | 0 | 8 | 117 | 28 | 137 | 9.87e-42 | 150 |
Msa0736870 | AT1G68320.1 | 56.757 | 111 | 48 | 0 | 12 | 122 | 19 | 129 | 1.51e-41 | 146 |
Msa0736870 | AT5G52260.1 | 57.600 | 125 | 47 | 2 | 13 | 131 | 13 | 137 | 2.52e-41 | 145 |
Msa0736870 | AT3G06490.1 | 57.391 | 115 | 49 | 0 | 8 | 122 | 15 | 129 | 3.01e-41 | 146 |
Msa0736870 | AT5G55020.1 | 59.633 | 109 | 44 | 0 | 10 | 118 | 24 | 132 | 4.21e-41 | 150 |
Msa0736870 | AT5G06100.5 | 56.364 | 110 | 48 | 0 | 8 | 117 | 28 | 137 | 4.53e-41 | 150 |
Msa0736870 | AT5G06100.2 | 56.364 | 110 | 48 | 0 | 8 | 117 | 28 | 137 | 4.53e-41 | 150 |
Msa0736870 | AT5G06100.3 | 56.364 | 110 | 48 | 0 | 8 | 117 | 28 | 137 | 4.53e-41 | 150 |
Msa0736870 | AT5G06100.4 | 56.364 | 110 | 48 | 0 | 8 | 117 | 28 | 137 | 4.53e-41 | 150 |
Msa0736870 | AT3G30210.1 | 46.012 | 163 | 85 | 2 | 11 | 172 | 26 | 186 | 1.01e-40 | 144 |
Msa0736870 | AT5G26660.2 | 74.118 | 85 | 22 | 0 | 45 | 129 | 14 | 98 | 1.06e-40 | 145 |
Msa0736870 | AT1G25340.1 | 52.101 | 119 | 57 | 0 | 13 | 131 | 19 | 137 | 1.45e-40 | 144 |
Msa0736870 | AT4G25560.1 | 60.377 | 106 | 42 | 0 | 13 | 118 | 11 | 116 | 2.07e-40 | 143 |
Msa0736870 | AT3G11440.2 | 56.604 | 106 | 46 | 0 | 12 | 117 | 41 | 146 | 2.29e-40 | 147 |
Msa0736870 | AT1G48000.1 | 53.982 | 113 | 52 | 0 | 10 | 122 | 30 | 142 | 7.15e-40 | 140 |
Msa0736870 | AT3G11440.3 | 56.604 | 106 | 46 | 0 | 12 | 117 | 41 | 146 | 8.10e-40 | 147 |
Msa0736870 | AT3G11440.4 | 56.604 | 106 | 46 | 0 | 12 | 117 | 41 | 146 | 8.10e-40 | 147 |
Msa0736870 | AT3G11440.1 | 56.604 | 106 | 46 | 0 | 12 | 117 | 41 | 146 | 8.10e-40 | 147 |
Msa0736870 | AT5G40330.1 | 36.620 | 213 | 121 | 4 | 13 | 224 | 13 | 212 | 1.02e-39 | 139 |
Msa0736870 | AT3G46130.1 | 57.391 | 115 | 47 | 1 | 11 | 123 | 8 | 122 | 1.09e-39 | 140 |
Msa0736870 | AT5G59780.3 | 59.434 | 106 | 43 | 0 | 12 | 117 | 8 | 113 | 1.41e-39 | 139 |
Msa0736870 | AT5G35550.1 | 59.813 | 107 | 43 | 0 | 12 | 118 | 14 | 120 | 2.66e-39 | 139 |
Msa0736870 | AT2G47190.1 | 54.054 | 111 | 51 | 0 | 12 | 122 | 20 | 130 | 4.15e-39 | 139 |
Msa0736870 | AT4G26930.1 | 48.889 | 135 | 65 | 3 | 10 | 144 | 17 | 147 | 2.01e-38 | 140 |
Msa0736870 | AT2G26960.1 | 57.522 | 113 | 47 | 1 | 9 | 121 | 17 | 128 | 2.50e-38 | 141 |
Msa0736870 | AT3G27920.1 | 55.769 | 104 | 46 | 0 | 13 | 116 | 15 | 118 | 1.60e-37 | 134 |
Msa0736870 | AT3G53200.1 | 56.731 | 104 | 45 | 0 | 12 | 115 | 9 | 112 | 1.22e-36 | 132 |
Msa0736870 | AT3G48920.1 | 54.808 | 104 | 47 | 0 | 13 | 116 | 19 | 122 | 1.25e-36 | 132 |
Msa0736870 | AT1G25340.2 | 49.580 | 119 | 55 | 1 | 13 | 131 | 19 | 132 | 2.61e-36 | 132 |
Msa0736870 | AT5G52600.1 | 48.819 | 127 | 56 | 1 | 12 | 129 | 12 | 138 | 3.20e-36 | 130 |
Msa0736870 | AT5G49620.1 | 51.304 | 115 | 56 | 0 | 8 | 122 | 22 | 136 | 4.49e-36 | 132 |
Msa0736870 | AT1G25340.3 | 49.580 | 119 | 55 | 1 | 13 | 131 | 19 | 132 | 4.94e-36 | 132 |
Msa0736870 | AT3G47600.2 | 49.650 | 143 | 52 | 4 | 24 | 153 | 22 | 157 | 1.54e-34 | 129 |
Msa0736870 | AT1G66370.1 | 54.783 | 115 | 48 | 1 | 1 | 115 | 1 | 111 | 6.10e-33 | 122 |
Msa0736870 | AT5G49620.2 | 45.736 | 129 | 56 | 1 | 8 | 122 | 22 | 150 | 1.79e-32 | 123 |
Msa0736870 | AT5G14750.3 | 38.172 | 186 | 90 | 6 | 38 | 217 | 3 | 169 | 3.93e-32 | 118 |
Msa0736870 | AT1G56650.1 | 53.435 | 131 | 52 | 2 | 11 | 133 | 7 | 136 | 7.74e-32 | 119 |
Msa0736870 | AT1G66380.1 | 58.095 | 105 | 44 | 0 | 11 | 115 | 7 | 111 | 5.19e-31 | 114 |
Msa0736870 | AT1G66390.1 | 43.671 | 158 | 67 | 1 | 11 | 146 | 7 | 164 | 6.34e-31 | 117 |
Msa0736870 | AT5G35550.2 | 63.750 | 80 | 29 | 0 | 39 | 118 | 44 | 123 | 1.02e-29 | 114 |
Msa0736870 | AT3G12820.2 | 69.444 | 72 | 22 | 0 | 47 | 118 | 1 | 72 | 1.88e-29 | 112 |
Msa0736870 | AT3G60460.1 | 50.962 | 104 | 50 | 1 | 12 | 114 | 11 | 114 | 2.03e-29 | 114 |
Msa0736870 | AT3G46130.3 | 63.415 | 82 | 28 | 1 | 44 | 123 | 9 | 90 | 2.12e-29 | 112 |
Msa0736870 | AT3G27810.2 | 64.865 | 74 | 26 | 0 | 45 | 118 | 4 | 77 | 2.27e-29 | 111 |
Msa0736870 | AT2G26950.1 | 47.788 | 113 | 58 | 1 | 9 | 121 | 13 | 124 | 4.37e-29 | 115 |
Msa0736870 | AT5G59780.2 | 67.123 | 73 | 24 | 0 | 45 | 117 | 20 | 92 | 5.36e-29 | 111 |
Msa0736870 | AT5G40350.2 | 64.474 | 76 | 27 | 0 | 45 | 120 | 5 | 80 | 5.55e-29 | 110 |
Msa0736870 | AT3G46130.4 | 64.198 | 81 | 27 | 1 | 45 | 123 | 20 | 100 | 5.58e-29 | 112 |
Msa0736870 | AT1G18960.1 | 45.299 | 117 | 61 | 2 | 14 | 130 | 10 | 123 | 1.64e-28 | 112 |
Msa0736870 | AT3G53200.2 | 67.606 | 71 | 23 | 0 | 45 | 115 | 9 | 79 | 5.58e-28 | 108 |
Msa0736870 | AT5G58850.1 | 49.074 | 108 | 52 | 2 | 12 | 118 | 103 | 208 | 1.13e-27 | 112 |
Msa0736870 | AT5G11050.1 | 47.573 | 103 | 51 | 2 | 14 | 115 | 105 | 205 | 2.42e-27 | 111 |
Msa0736870 | AT4G18770.1 | 47.748 | 111 | 55 | 2 | 9 | 118 | 212 | 320 | 5.60e-27 | 110 |
Msa0736870 | AT1G22640.3 | 66.667 | 69 | 23 | 0 | 59 | 127 | 2 | 70 | 3.74e-26 | 103 |
Msa0736870 | AT1G71030.2 | 46.729 | 107 | 50 | 2 | 51 | 157 | 5 | 104 | 3.76e-25 | 100 |
Msa0736870 | AT1G71030.1 | 46.729 | 107 | 50 | 2 | 51 | 157 | 19 | 118 | 6.68e-25 | 100 |
Msa0736870 | AT3G27785.1 | 42.963 | 135 | 67 | 4 | 9 | 140 | 184 | 311 | 6.93e-25 | 104 |
Msa0736870 | AT5G02320.3 | 47.170 | 106 | 53 | 2 | 12 | 116 | 65 | 168 | 2.48e-24 | 103 |
Msa0736870 | AT5G02320.1 | 47.170 | 106 | 53 | 2 | 12 | 116 | 125 | 228 | 2.67e-24 | 103 |
Msa0736870 | AT5G02320.2 | 47.170 | 106 | 53 | 2 | 12 | 116 | 125 | 228 | 2.67e-24 | 103 |
Msa0736870 | AT2G39880.1 | 49.057 | 106 | 45 | 2 | 14 | 115 | 50 | 150 | 2.98e-24 | 102 |
Msa0736870 | AT3G55730.1 | 42.177 | 147 | 67 | 5 | 14 | 148 | 56 | 196 | 7.15e-24 | 101 |
Msa0736870 | AT3G09370.2 | 46.667 | 105 | 53 | 2 | 12 | 115 | 133 | 235 | 1.21e-23 | 101 |
Msa0736870 | AT3G09370.1 | 46.667 | 105 | 53 | 2 | 12 | 115 | 128 | 230 | 1.28e-23 | 101 |
Msa0736870 | AT3G09370.3 | 46.667 | 105 | 53 | 2 | 12 | 115 | 141 | 243 | 1.80e-23 | 101 |
Msa0736870 | AT3G09230.1 | 45.794 | 107 | 49 | 2 | 14 | 116 | 55 | 156 | 2.80e-23 | 99.4 |
Msa0736870 | AT5G67300.1 | 45.631 | 103 | 53 | 2 | 14 | 115 | 6 | 106 | 3.28e-23 | 97.8 |
Msa0736870 | AT3G50060.1 | 45.631 | 103 | 53 | 2 | 14 | 115 | 6 | 106 | 5.51e-23 | 97.4 |
Msa0736870 | AT5G40360.1 | 40.741 | 108 | 62 | 2 | 12 | 119 | 156 | 261 | 1.81e-22 | 96.7 |
Msa0736870 | AT5G14750.4 | 36.250 | 160 | 82 | 5 | 59 | 217 | 2 | 142 | 2.57e-22 | 91.3 |
Msa0736870 | AT5G14750.2 | 36.250 | 160 | 82 | 5 | 59 | 217 | 2 | 142 | 2.57e-22 | 91.3 |
Msa0736870 | AT4G37260.1 | 45.631 | 103 | 53 | 2 | 14 | 115 | 13 | 113 | 3.40e-22 | 95.5 |
Msa0736870 | AT5G11510.3 | 44.340 | 106 | 56 | 2 | 12 | 116 | 79 | 182 | 3.76e-22 | 97.8 |
Msa0736870 | AT5G11510.1 | 44.340 | 106 | 56 | 2 | 12 | 116 | 79 | 182 | 3.76e-22 | 97.8 |
Msa0736870 | AT5G11510.4 | 44.340 | 106 | 56 | 2 | 12 | 116 | 79 | 182 | 3.76e-22 | 97.8 |
Msa0736870 | AT5G11510.5 | 44.340 | 106 | 56 | 2 | 12 | 116 | 79 | 182 | 6.05e-22 | 97.1 |
Msa0736870 | AT5G11510.2 | 44.340 | 106 | 56 | 2 | 12 | 116 | 79 | 182 | 6.19e-22 | 97.1 |
Msa0736870 | AT1G66380.3 | 57.143 | 77 | 33 | 0 | 39 | 115 | 2 | 78 | 1.20e-21 | 88.6 |
Msa0736870 | AT4G32730.5 | 43.396 | 106 | 57 | 2 | 12 | 116 | 85 | 188 | 2.05e-21 | 95.5 |
Msa0736870 | AT4G32730.4 | 43.396 | 106 | 57 | 2 | 12 | 116 | 85 | 188 | 2.05e-21 | 95.5 |
Msa0736870 | AT4G32730.3 | 43.396 | 106 | 57 | 2 | 12 | 116 | 85 | 188 | 2.05e-21 | 95.5 |
Msa0736870 | AT4G32730.2 | 43.396 | 106 | 57 | 2 | 12 | 116 | 85 | 188 | 2.05e-21 | 95.5 |
Msa0736870 | AT4G32730.1 | 43.396 | 106 | 57 | 2 | 12 | 116 | 85 | 188 | 2.20e-21 | 95.5 |
Msa0736870 | AT2G23290.1 | 48.077 | 104 | 49 | 4 | 14 | 115 | 13 | 113 | 3.30e-21 | 92.4 |
Msa0736870 | AT1G69560.1 | 40.541 | 111 | 63 | 2 | 9 | 118 | 102 | 210 | 3.74e-21 | 92.8 |
Msa0736870 | AT2G25230.1 | 41.176 | 119 | 65 | 3 | 9 | 124 | 21 | 137 | 4.00e-21 | 90.9 |
Msa0736870 | AT1G69560.2 | 40.541 | 111 | 63 | 2 | 9 | 118 | 118 | 226 | 4.63e-21 | 92.8 |
Msa0736870 | AT5G61420.1 | 65.574 | 61 | 21 | 0 | 81 | 141 | 2 | 62 | 1.78e-20 | 90.1 |
Msa0736870 | AT3G23250.2 | 49.438 | 89 | 33 | 1 | 59 | 135 | 2 | 90 | 2.53e-20 | 88.6 |
Msa0736870 | AT1G17950.1 | 43.396 | 106 | 57 | 2 | 14 | 118 | 5 | 108 | 4.46e-20 | 88.2 |
Msa0736870 | AT1G26780.2 | 41.667 | 108 | 60 | 2 | 12 | 118 | 96 | 201 | 1.18e-19 | 89.0 |
Msa0736870 | AT1G26780.1 | 41.667 | 108 | 60 | 2 | 12 | 118 | 96 | 201 | 1.29e-19 | 87.4 |
Msa0736870 | AT1G73410.1 | 43.396 | 106 | 57 | 2 | 14 | 118 | 6 | 109 | 1.64e-18 | 83.6 |
Msa0736870 | AT1G73410.2 | 43.396 | 106 | 57 | 2 | 14 | 118 | 6 | 109 | 5.09e-18 | 81.6 |
Msa0736870 | AT3G29020.1 | 36.792 | 106 | 64 | 2 | 14 | 118 | 65 | 168 | 1.12e-17 | 81.3 |
Msa0736870 | AT3G29020.2 | 36.792 | 106 | 64 | 2 | 14 | 118 | 67 | 170 | 1.21e-17 | 82.4 |
Msa0736870 | AT4G00540.2 | 40.179 | 112 | 61 | 3 | 12 | 119 | 101 | 210 | 2.32e-17 | 82.8 |
Msa0736870 | AT5G40430.1 | 35.714 | 112 | 70 | 1 | 9 | 120 | 49 | 158 | 3.27e-17 | 80.5 |
Msa0736870 | AT4G00540.1 | 40.179 | 112 | 61 | 3 | 12 | 119 | 99 | 208 | 3.34e-17 | 82.4 |
Msa0736870 | AT4G28110.2 | 75.610 | 41 | 10 | 0 | 88 | 128 | 4 | 44 | 3.63e-17 | 79.0 |
Msa0736870 | AT5G15310.3 | 80.488 | 41 | 8 | 0 | 88 | 128 | 9 | 49 | 5.95e-17 | 79.3 |
Msa0736870 | AT1G66380.2 | 52.381 | 84 | 40 | 0 | 11 | 94 | 7 | 90 | 7.34e-17 | 75.9 |
Msa0736870 | AT5G14340.2 | 78.571 | 42 | 9 | 0 | 88 | 129 | 10 | 51 | 7.48e-17 | 77.8 |
Msa0736870 | AT5G17800.1 | 37.500 | 104 | 64 | 1 | 14 | 117 | 93 | 195 | 1.64e-16 | 79.3 |
Msa0736870 | AT4G33450.1 | 35.897 | 117 | 67 | 3 | 3 | 118 | 13 | 122 | 1.70e-16 | 78.2 |
Msa0736870 | AT5G59780.1 | 61.224 | 49 | 19 | 0 | 70 | 118 | 1 | 49 | 3.77e-15 | 72.8 |
Msa0736870 | AT3G46130.2 | 63.462 | 52 | 17 | 1 | 74 | 123 | 5 | 56 | 4.11e-15 | 73.2 |
Msa0736870 | AT2G37630.1 | 38.614 | 101 | 60 | 1 | 17 | 115 | 7 | 107 | 6.09e-15 | 75.1 |
Msa0736870 | AT3G28910.2 | 60.377 | 53 | 19 | 1 | 77 | 129 | 1 | 51 | 1.17e-13 | 70.1 |
Msa0736870 | AT2G02820.3 | 33.793 | 145 | 91 | 3 | 17 | 161 | 33 | 172 | 2.18e-13 | 70.5 |
Msa0736870 | AT5G39700.1 | 33.036 | 112 | 74 | 1 | 13 | 124 | 55 | 165 | 3.05e-13 | 67.8 |
Msa0736870 | AT2G02820.1 | 33.793 | 145 | 91 | 3 | 17 | 161 | 33 | 172 | 3.84e-13 | 70.1 |
Msa0736870 | AT1G22640.2 | 72.500 | 40 | 11 | 0 | 88 | 127 | 16 | 55 | 4.00e-13 | 67.4 |
Msa0736870 | AT1G74650.3 | 69.767 | 43 | 13 | 0 | 77 | 119 | 1 | 43 | 4.15e-13 | 68.6 |
Msa0736870 | AT2G02820.2 | 33.793 | 145 | 91 | 3 | 17 | 161 | 33 | 172 | 4.21e-13 | 70.1 |
Msa0736870 | AT4G25560.2 | 56.000 | 50 | 22 | 0 | 69 | 118 | 1 | 50 | 4.23e-13 | 68.2 |
Msa0736870 | AT1G74430.2 | 49.153 | 59 | 30 | 0 | 70 | 128 | 1 | 59 | 4.32e-13 | 67.8 |
Msa0736870 | AT1G14350.2 | 37.624 | 101 | 62 | 1 | 17 | 117 | 28 | 127 | 6.38e-13 | 69.7 |
Msa0736870 | AT1G14350.1 | 37.624 | 101 | 62 | 1 | 17 | 117 | 28 | 127 | 6.38e-13 | 69.7 |
Find 70 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAGGAGACCTGCCAATTT+AGG | 0.179748 | 5_1:-53531326 | None:intergenic |
TTTCTCTTTGATTTCAATTA+TGG | 0.194553 | 5_1:-53533336 | None:intergenic |
ATTTGATACAATGGAGTTAA+TGG | 0.202479 | 5_1:+53533382 | Msa0736870:CDS |
TAACTCCATTGTATCAAATA+AGG | 0.211281 | 5_1:-53533378 | None:intergenic |
GTTGTTGTTTAGGTAGATTT+TGG | 0.211426 | 5_1:-53533181 | None:intergenic |
TCTTCCTTGTTATTATTATT+AGG | 0.250376 | 5_1:-53533545 | None:intergenic |
ATGAAGATCTTCAAGGAAAT+TGG | 0.251000 | 5_1:-53533504 | None:intergenic |
ATCAGAATATGAAGAGAAAA+TGG | 0.260581 | 5_1:+53531849 | Msa0736870:CDS |
TAAGATTGCTTCTCATTTAC+CGG | 0.298461 | 5_1:+53533037 | Msa0736870:CDS |
TAAGAGGAGCATCAAGTTCT+TGG | 0.314041 | 5_1:-53533673 | None:intergenic |
TTATTAGGCCATTCAAAATC+AGG | 0.317311 | 5_1:-53533530 | None:intergenic |
ATAACAACAATATGGCCTTT+TGG | 0.321530 | 5_1:+53533573 | Msa0736870:CDS |
GGTGACTCAAAAGAAGTCTT+TGG | 0.330165 | 5_1:-53533311 | None:intergenic |
ATCAATTTCATCCTTACTAA+TGG | 0.334411 | 5_1:+53531281 | Msa0736870:CDS |
TTAGACACTATAATCTCATT+AGG | 0.357457 | 5_1:-53533440 | None:intergenic |
AAAGGAGACCTGCCAATTTA+GGG | 0.368352 | 5_1:-53531325 | None:intergenic |
CTGGAGAGCTGTCCCTAAAT+TGG | 0.368996 | 5_1:+53531313 | Msa0736870:CDS |
TTACTAATGGTCAATGTTGC+TGG | 0.374011 | 5_1:+53531294 | Msa0736870:CDS |
ATCTCATTAGGTTCTATCAT+TGG | 0.375201 | 5_1:-53533428 | None:intergenic |
GGTTGGTGTAGTTGTTGTTT+AGG | 0.382965 | 5_1:-53533191 | None:intergenic |
AAAAGTCCTCTCTTTAAATC+TGG | 0.383763 | 5_1:-53531826 | None:intergenic |
GGCCATGGATTTAGAATCTT+GGG | 0.394640 | 5_1:+53533712 | Msa0736870:CDS |
AGAATGCAATAACAACAATA+TGG | 0.412740 | 5_1:+53533565 | Msa0736870:CDS |
TTCATGCTCAACTTGGGAAC+AGG | 0.415682 | 5_1:+53531881 | Msa0736870:CDS |
TTGTGAATAGAGAGAGTTAA+GGG | 0.416471 | 5_1:-53531146 | None:intergenic |
AACTCCATTGTATCAAATAA+GGG | 0.417577 | 5_1:-53533377 | None:intergenic |
AAACCACTAGCACTCTCTAA+TGG | 0.418195 | 5_1:+53533146 | Msa0736870:CDS |
TGGCCATGGATTTAGAATCT+TGG | 0.423773 | 5_1:+53533711 | Msa0736870:CDS |
CTGTCTTCCTCTGCGGTCCA+TGG | 0.442065 | 5_1:-53531251 | None:intergenic |
GCTAGTGGTTTGTGTGTGAT+AGG | 0.449945 | 5_1:-53533134 | None:intergenic |
ATTGATCTTCATGCTCAACT+TGG | 0.457491 | 5_1:+53531874 | Msa0736870:CDS |
TTAAACATGCAGGGCTACTA+AGG | 0.460776 | 5_1:+53531761 | Msa0736870:intron |
AACTCTCTCTATTCACAACT+TGG | 0.461988 | 5_1:+53531151 | Msa0736870:five_prime_UTR |
GATGACAATGATGTTAATAA+TGG | 0.462436 | 5_1:+53533641 | Msa0736870:CDS |
ATTTCATTATCCGTTCTTCC+CGG | 0.474711 | 5_1:-53533056 | None:intergenic |
CATGGACCGCAGAGGAAGAC+AGG | 0.482495 | 5_1:+53531252 | Msa0736870:CDS |
TGTCAATTGTCAAAGGTTGT+TGG | 0.484587 | 5_1:-53533235 | None:intergenic |
TCTTTGATTTCAATTATGGT+TGG | 0.487313 | 5_1:-53533332 | None:intergenic |
AGCAACATTGACCATTAGTA+AGG | 0.496175 | 5_1:-53531292 | None:intergenic |
TATACACATAATGATAGCTT+AGG | 0.501883 | 5_1:-53531103 | None:intergenic |
AATAAAGTCATCATCCCAAA+AGG | 0.505829 | 5_1:-53533588 | None:intergenic |
CAGGGAGATGAAGATCTTCA+AGG | 0.511219 | 5_1:-53533511 | None:intergenic |
CCAACCATTAGAAAAGGAAC+AGG | 0.512623 | 5_1:+53533208 | Msa0736870:CDS |
ACTACACCAACCATTAGAAA+AGG | 0.512895 | 5_1:+53533202 | Msa0736870:CDS |
ATTCTTGAGTAGTTGCTAAG+AGG | 0.513656 | 5_1:-53533689 | None:intergenic |
GATACAATGGAGTTAATGGA+TGG | 0.515455 | 5_1:+53533386 | Msa0736870:CDS |
TATTAGGCCATTCAAAATCA+GGG | 0.525270 | 5_1:-53533529 | None:intergenic |
CAACCTTGTTGTGACAAAGT+AGG | 0.529067 | 5_1:+53531215 | Msa0736870:CDS |
TTCTCATTTACCGGGAAGAA+CGG | 0.532372 | 5_1:+53533046 | Msa0736870:CDS |
TGATGAAGAAGTGGATGAAG+AGG | 0.532773 | 5_1:-53533465 | None:intergenic |
AACACCCTTATTTGATACAA+TGG | 0.533111 | 5_1:+53533373 | Msa0736870:CDS |
GTTGTGAATAGAGAGAGTTA+AGG | 0.541062 | 5_1:-53531147 | None:intergenic |
CAACTACTCAAGAATGGCCA+TGG | 0.542456 | 5_1:+53533697 | Msa0736870:CDS |
TTGATCTTCATGCTCAACTT+GGG | 0.546382 | 5_1:+53531875 | Msa0736870:CDS |
TGCCCAAGATTCTAAATCCA+TGG | 0.550589 | 5_1:-53533714 | None:intergenic |
AGAGCTGTCCCTAAATTGGC+AGG | 0.553725 | 5_1:+53531317 | Msa0736870:CDS |
CTTCCATTAGAGAGTGCTAG+TGG | 0.558285 | 5_1:-53533149 | None:intergenic |
TCTTAGCAACTACTCAAGAA+TGG | 0.559850 | 5_1:+53533691 | Msa0736870:CDS |
TTGAGGCCAGATTTAAAGAG+AGG | 0.565291 | 5_1:+53531820 | Msa0736870:CDS |
AAGATTGCTTCTCATTTACC+GGG | 0.583628 | 5_1:+53533038 | Msa0736870:CDS |
TGGTCAATGTCAATTGTCAA+AGG | 0.584719 | 5_1:-53533242 | None:intergenic |
AATTGAGGAGCATAATAAAG+AGG | 0.587245 | 5_1:+53533280 | Msa0736870:CDS |
AGAGAGTTAAGGGAGTTGAG+AGG | 0.599787 | 5_1:-53531136 | None:intergenic |
TGATGAATATGATGAAGAAG+TGG | 0.612083 | 5_1:-53533474 | None:intergenic |
AATCCTACTTTGTCACAACA+AGG | 0.616257 | 5_1:-53531218 | None:intergenic |
TTAGATGGACAAATTACTTG+AGG | 0.624742 | 5_1:+53531803 | Msa0736870:CDS |
CATGCAGGGCTACTAAGGTG+TGG | 0.649256 | 5_1:+53531766 | Msa0736870:intron |
GAGCTTCCTGTCTTCCTCTG+CGG | 0.660503 | 5_1:-53531258 | None:intergenic |
ATGGCCTAATAATAATAACA+AGG | 0.688928 | 5_1:+53533541 | Msa0736870:CDS |
AAAAGGGCCATGGACCGCAG+AGG | 0.709559 | 5_1:+53531244 | Msa0736870:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTATTTTAAATATAAAGAA+AGG | - | chr5_1:53532481-53532500 | None:intergenic | 10.0% |
!! | AAGTAATTAGTAAAATATTA+GGG | - | chr5_1:53532992-53533011 | None:intergenic | 10.0% |
!! | AAAGTAATTAGTAAAATATT+AGG | - | chr5_1:53532993-53533012 | None:intergenic | 10.0% |
!! | ATAATGAAATAAAAAATCAT+TGG | + | chr5_1:53533069-53533088 | Msa0736870:CDS | 10.0% |
!!! | TGTTTTGAAAAAAGAATAAT+GGG | + | chr5_1:53531188-53531207 | Msa0736870:exon | 15.0% |
!!! | TTAATCATTGTTTTAATTTG+TGG | + | chr5_1:53531448-53531467 | Msa0736870:intron | 15.0% |
!! | TCATAGATTACAAAAAATTA+CGG | + | chr5_1:53531471-53531490 | Msa0736870:intron | 15.0% |
!!! | TTCAAAAATATTTTGCATTA+TGG | + | chr5_1:53531625-53531644 | Msa0736870:intron | 15.0% |
!!! | ATTCATTGAAGAAATTATTT+TGG | - | chr5_1:53531715-53531734 | None:intergenic | 15.0% |
!! | CTTTAAATTCTAATCATAAA+TGG | - | chr5_1:53532248-53532267 | None:intergenic | 15.0% |
!!! | ATATTATGATGAAATCTTTT+AGG | + | chr5_1:53532449-53532468 | Msa0736870:intron | 15.0% |
!! | ATAATTTGAATAAAGTTATG+TGG | + | chr5_1:53532505-53532524 | Msa0736870:intron | 15.0% |
!! | TATTATCTATATAAAAGGAT+AGG | + | chr5_1:53532536-53532555 | Msa0736870:intron | 15.0% |
!! | ATTATCTATATAAAAGGATA+GGG | + | chr5_1:53532537-53532556 | Msa0736870:intron | 15.0% |
!! | ACAAAAAATAATGTAACTAT+TGG | - | chr5_1:53532954-53532973 | None:intergenic | 15.0% |
!!! | GTGTTTTGAAAAAAGAATAA+TGG | + | chr5_1:53531187-53531206 | Msa0736870:exon | 20.0% |
!! | TGTATAATTCAAATGCAATT+TGG | + | chr5_1:53531581-53531600 | Msa0736870:intron | 20.0% |
!!! | ATATTTTGCATTATGGTTAA+TGG | + | chr5_1:53531632-53531651 | Msa0736870:intron | 20.0% |
!!! | TATTTTGCATTATGGTTAAT+GGG | + | chr5_1:53531633-53531652 | Msa0736870:intron | 20.0% |
!! | AATTAAACATATGTAGAACT+GGG | - | chr5_1:53531932-53531951 | None:intergenic | 20.0% |
!! | AAATTAAACATATGTAGAAC+TGG | - | chr5_1:53531933-53531952 | None:intergenic | 20.0% |
!! | TGATTAATCATTAGTAAGAA+AGG | - | chr5_1:53531958-53531977 | None:intergenic | 20.0% |
!! | TAAACTAATTACAACTTGAA+GGG | - | chr5_1:53532107-53532126 | None:intergenic | 20.0% |
!! | ATAAACTAATTACAACTTGA+AGG | - | chr5_1:53532108-53532127 | None:intergenic | 20.0% |
!!! | CGTATGAAAATTTTATACTA+TGG | + | chr5_1:53532174-53532193 | Msa0736870:intron | 20.0% |
!!! | TTTTTTCTTTCTTTTGTAGA+TGG | + | chr5_1:53533012-53533031 | Msa0736870:intron | 20.0% |
!!! | CAATTTTTGTTTCAATTTTG+TGG | - | chr5_1:53533265-53533284 | None:intergenic | 20.0% |
!! | CAAAATTGAAACAAAAATTG+AGG | + | chr5_1:53533265-53533284 | Msa0736870:CDS | 20.0% |
!!! | TTTCTCTTTGATTTCAATTA+TGG | - | chr5_1:53533339-53533358 | None:intergenic | 20.0% |
!!! | TCTTCCTTGTTATTATTATT+AGG | - | chr5_1:53533548-53533567 | None:intergenic | 20.0% |
! | TATACACATAATGATAGCTT+AGG | - | chr5_1:53531106-53531125 | None:intergenic | 25.0% |
! | ACAAAGTAGGATTGAAAAAA+GGG | + | chr5_1:53531228-53531247 | Msa0736870:CDS | 25.0% |
! | ATCAATTTCATCCTTACTAA+TGG | + | chr5_1:53531281-53531300 | Msa0736870:CDS | 25.0% |
! | CAAAAAATTACGGTTAAATG+CGG | + | chr5_1:53531481-53531500 | Msa0736870:intron | 25.0% |
!! | ATGGTTAATGGGATTAATTT+TGG | + | chr5_1:53531644-53531663 | Msa0736870:intron | 25.0% |
! | ATCAGAATATGAAGAGAAAA+TGG | + | chr5_1:53531849-53531868 | Msa0736870:CDS | 25.0% |
! | TAACTGTGTTACATTTCAAT+TGG | - | chr5_1:53532759-53532778 | None:intergenic | 25.0% |
! | TGAAATGTAACACAGTTATT+TGG | + | chr5_1:53532761-53532780 | Msa0736870:intron | 25.0% |
! | AAAGAAAAAGCTCAAGAAAA+TGG | + | chr5_1:53533103-53533122 | Msa0736870:CDS | 25.0% |
! | AAGAAAAAGCTCAAGAAAAT+GGG | + | chr5_1:53533104-53533123 | Msa0736870:CDS | 25.0% |
!!! | TTGTTGTTTAGGTAGATTTT+GGG | - | chr5_1:53533183-53533202 | None:intergenic | 25.0% |
!! | TCTTTGATTTCAATTATGGT+TGG | - | chr5_1:53533335-53533354 | None:intergenic | 25.0% |
! | AACTCCATTGTATCAAATAA+GGG | - | chr5_1:53533380-53533399 | None:intergenic | 25.0% |
! | TAACTCCATTGTATCAAATA+AGG | - | chr5_1:53533381-53533400 | None:intergenic | 25.0% |
! | ATTTGATACAATGGAGTTAA+TGG | + | chr5_1:53533382-53533401 | Msa0736870:CDS | 25.0% |
! | TTAGACACTATAATCTCATT+AGG | - | chr5_1:53533443-53533462 | None:intergenic | 25.0% |
! | ATGGCCTAATAATAATAACA+AGG | + | chr5_1:53533541-53533560 | Msa0736870:CDS | 25.0% |
! | AGAATGCAATAACAACAATA+TGG | + | chr5_1:53533565-53533584 | Msa0736870:CDS | 25.0% |
! | GATGACAATGATGTTAATAA+TGG | + | chr5_1:53533641-53533660 | Msa0736870:CDS | 25.0% |
TTGTGAATAGAGAGAGTTAA+GGG | - | chr5_1:53531149-53531168 | None:intergenic | 30.0% | |
GACAAAGTAGGATTGAAAAA+AGG | + | chr5_1:53531227-53531246 | Msa0736870:CDS | 30.0% | |
AAAAAAGCAAGAGCAATGAA+AGG | - | chr5_1:53531346-53531365 | None:intergenic | 30.0% | |
TCAATTGTGATTAAACATGC+AGG | + | chr5_1:53531751-53531770 | Msa0736870:intron | 30.0% | |
CAATTGTGATTAAACATGCA+GGG | + | chr5_1:53531752-53531771 | Msa0736870:intron | 30.0% | |
GAAAAAGTTGTAGACTTAGA+TGG | + | chr5_1:53531788-53531807 | Msa0736870:CDS | 30.0% | |
TTAGATGGACAAATTACTTG+AGG | + | chr5_1:53531803-53531822 | Msa0736870:CDS | 30.0% | |
AAAAGTCCTCTCTTTAAATC+TGG | - | chr5_1:53531829-53531848 | None:intergenic | 30.0% | |
TGAAACACTAATGACAACAA+AGG | + | chr5_1:53532044-53532063 | Msa0736870:intron | 30.0% | |
GATTAGAAGTAAAAAGAACG+TGG | + | chr5_1:53532137-53532156 | Msa0736870:intron | 30.0% | |
!! | TTTCTTAACTTGCATGACAT+TGG | + | chr5_1:53532350-53532369 | Msa0736870:intron | 30.0% |
! | GATGAAACTTTTCTTTTCAG+TGG | + | chr5_1:53532375-53532394 | Msa0736870:intron | 30.0% |
TCAAATAACTCAACTTGAGA+CGG | - | chr5_1:53532802-53532821 | None:intergenic | 30.0% | |
TGAAACAAATGCAATACACT+CGG | + | chr5_1:53532819-53532838 | Msa0736870:intron | 30.0% | |
TAAGATTGCTTCTCATTTAC+CGG | + | chr5_1:53533037-53533056 | Msa0736870:CDS | 30.0% | |
!!! | GTTGTTGTTTAGGTAGATTT+TGG | - | chr5_1:53533184-53533203 | None:intergenic | 30.0% |
! | TTTTCCTGTTCCTTTTCTAA+TGG | - | chr5_1:53533215-53533234 | None:intergenic | 30.0% |
! | AATTGAGGAGCATAATAAAG+AGG | + | chr5_1:53533280-53533299 | Msa0736870:CDS | 30.0% |
! | AACACCCTTATTTGATACAA+TGG | + | chr5_1:53533373-53533392 | Msa0736870:CDS | 30.0% |
ATCTCATTAGGTTCTATCAT+TGG | - | chr5_1:53533431-53533450 | None:intergenic | 30.0% | |
TGATGAATATGATGAAGAAG+TGG | - | chr5_1:53533477-53533496 | None:intergenic | 30.0% | |
ATGAAGATCTTCAAGGAAAT+TGG | - | chr5_1:53533507-53533526 | None:intergenic | 30.0% | |
TATTAGGCCATTCAAAATCA+GGG | - | chr5_1:53533532-53533551 | None:intergenic | 30.0% | |
TTATTAGGCCATTCAAAATC+AGG | - | chr5_1:53533533-53533552 | None:intergenic | 30.0% | |
! | ATAACAACAATATGGCCTTT+TGG | + | chr5_1:53533573-53533592 | Msa0736870:CDS | 30.0% |
! | TAACAACAATATGGCCTTTT+GGG | + | chr5_1:53533574-53533593 | Msa0736870:CDS | 30.0% |
AATAAAGTCATCATCCCAAA+AGG | - | chr5_1:53533591-53533610 | None:intergenic | 30.0% | |
GTTGTGAATAGAGAGAGTTA+AGG | - | chr5_1:53531150-53531169 | None:intergenic | 35.0% | |
AACTCTCTCTATTCACAACT+TGG | + | chr5_1:53531151-53531170 | Msa0736870:five_prime_UTR | 35.0% | |
AATCCTACTTTGTCACAACA+AGG | - | chr5_1:53531221-53531240 | None:intergenic | 35.0% | |
AGCAACATTGACCATTAGTA+AGG | - | chr5_1:53531295-53531314 | None:intergenic | 35.0% | |
TTACTAATGGTCAATGTTGC+TGG | + | chr5_1:53531294-53531313 | Msa0736870:CDS | 35.0% | |
! | GACGAGATTTTTGATGTTTC+TGG | - | chr5_1:53531526-53531545 | None:intergenic | 35.0% |
ATTGATCTTCATGCTCAACT+TGG | + | chr5_1:53531874-53531893 | Msa0736870:CDS | 35.0% | |
TTGATCTTCATGCTCAACTT+GGG | + | chr5_1:53531875-53531894 | Msa0736870:CDS | 35.0% | |
ATATGTAGAACTGGGTGAAA+TGG | - | chr5_1:53531924-53531943 | None:intergenic | 35.0% | |
TAATTACAACTTGAAGGGCA+TGG | - | chr5_1:53532102-53532121 | None:intergenic | 35.0% | |
! | TTTTCATACGCCTCTTTTCA+TGG | - | chr5_1:53532164-53532183 | None:intergenic | 35.0% |
CATTGAAACTCACACAAAAG+AGG | - | chr5_1:53532683-53532702 | None:intergenic | 35.0% | |
AAGATTGCTTCTCATTTACC+GGG | + | chr5_1:53533038-53533057 | Msa0736870:CDS | 35.0% | |
ATTTCATTATCCGTTCTTCC+CGG | - | chr5_1:53533059-53533078 | None:intergenic | 35.0% | |
ACTACACCAACCATTAGAAA+AGG | + | chr5_1:53533202-53533221 | Msa0736870:CDS | 35.0% | |
TGTCAATTGTCAAAGGTTGT+TGG | - | chr5_1:53533238-53533257 | None:intergenic | 35.0% | |
TGGTCAATGTCAATTGTCAA+AGG | - | chr5_1:53533245-53533264 | None:intergenic | 35.0% | |
GATACAATGGAGTTAATGGA+TGG | + | chr5_1:53533386-53533405 | Msa0736870:CDS | 35.0% | |
! | TTCATCTCCCTGATTTTGAA+TGG | + | chr5_1:53533522-53533541 | Msa0736870:CDS | 35.0% |
ATTCTTGAGTAGTTGCTAAG+AGG | - | chr5_1:53533692-53533711 | None:intergenic | 35.0% | |
TCTTAGCAACTACTCAAGAA+TGG | + | chr5_1:53533691-53533710 | Msa0736870:CDS | 35.0% | |
! | CAACCTTGTTGTGACAAAGT+AGG | + | chr5_1:53531215-53531234 | Msa0736870:CDS | 40.0% |
TAGGATTGAAAAAAGGGCCA+TGG | + | chr5_1:53531234-53531253 | Msa0736870:CDS | 40.0% | |
AAAGGAGACCTGCCAATTTA+GGG | - | chr5_1:53531328-53531347 | None:intergenic | 40.0% | |
TTAAACATGCAGGGCTACTA+AGG | + | chr5_1:53531761-53531780 | Msa0736870:intron | 40.0% | |
TTGAGGCCAGATTTAAAGAG+AGG | + | chr5_1:53531820-53531839 | Msa0736870:CDS | 40.0% | |
AGTGATGCAAGAATTACGCA+TGG | + | chr5_1:53532421-53532440 | Msa0736870:intron | 40.0% | |
GTGATGCAAGAATTACGCAT+GGG | + | chr5_1:53532422-53532441 | Msa0736870:intron | 40.0% | |
GTTATGCTAGACGTTGTAAC+CGG | + | chr5_1:53532637-53532656 | Msa0736870:intron | 40.0% | |
TTATGCTAGACGTTGTAACC+GGG | + | chr5_1:53532638-53532657 | Msa0736870:intron | 40.0% | |
GAAACTCACACAAAAGAGGT+TGG | - | chr5_1:53532679-53532698 | None:intergenic | 40.0% | |
!!! | ACTCGGATGTTTTAGAGCTT+TGG | + | chr5_1:53532836-53532855 | Msa0736870:intron | 40.0% |
TTCTCATTTACCGGGAAGAA+CGG | + | chr5_1:53533046-53533065 | Msa0736870:CDS | 40.0% | |
AAACCACTAGCACTCTCTAA+TGG | + | chr5_1:53533146-53533165 | Msa0736870:CDS | 40.0% | |
!! | GGTTGGTGTAGTTGTTGTTT+AGG | - | chr5_1:53533194-53533213 | None:intergenic | 40.0% |
! | CCTGTTCCTTTTCTAATGGT+TGG | - | chr5_1:53533211-53533230 | None:intergenic | 40.0% |
CCAACCATTAGAAAAGGAAC+AGG | + | chr5_1:53533208-53533227 | Msa0736870:CDS | 40.0% | |
GGTGACTCAAAAGAAGTCTT+TGG | - | chr5_1:53533314-53533333 | None:intergenic | 40.0% | |
TGATGAAGAAGTGGATGAAG+AGG | - | chr5_1:53533468-53533487 | None:intergenic | 40.0% | |
!! | TAAGAGGAGCATCAAGTTCT+TGG | - | chr5_1:53533676-53533695 | None:intergenic | 40.0% |
! | TGGCCATGGATTTAGAATCT+TGG | + | chr5_1:53533711-53533730 | Msa0736870:CDS | 40.0% |
! | GGCCATGGATTTAGAATCTT+GGG | + | chr5_1:53533712-53533731 | Msa0736870:CDS | 40.0% |
TGCCCAAGATTCTAAATCCA+TGG | - | chr5_1:53533717-53533736 | None:intergenic | 40.0% | |
AGAGAGTTAAGGGAGTTGAG+AGG | - | chr5_1:53531139-53531158 | None:intergenic | 45.0% | |
GAAAGGAGACCTGCCAATTT+AGG | - | chr5_1:53531329-53531348 | None:intergenic | 45.0% | |
TTCATGCTCAACTTGGGAAC+AGG | + | chr5_1:53531881-53531900 | Msa0736870:CDS | 45.0% | |
GTAGAACTGGGTGAAATGGT+TGG | - | chr5_1:53531920-53531939 | None:intergenic | 45.0% | |
AGAACGTGGTCCATGAAAAG+AGG | + | chr5_1:53532151-53532170 | Msa0736870:intron | 45.0% | |
ACACAAAAGAGGTTGGACTG+GGG | - | chr5_1:53532672-53532691 | None:intergenic | 45.0% | |
CACACAAAAGAGGTTGGACT+GGG | - | chr5_1:53532673-53532692 | None:intergenic | 45.0% | |
TCACACAAAAGAGGTTGGAC+TGG | - | chr5_1:53532674-53532693 | None:intergenic | 45.0% | |
! | GCTAGTGGTTTGTGTGTGAT+AGG | - | chr5_1:53533137-53533156 | None:intergenic | 45.0% |
!! | CTTCCATTAGAGAGTGCTAG+TGG | - | chr5_1:53533152-53533171 | None:intergenic | 45.0% |
CAGGGAGATGAAGATCTTCA+AGG | - | chr5_1:53533514-53533533 | None:intergenic | 45.0% | |
CAACTACTCAAGAATGGCCA+TGG | + | chr5_1:53533697-53533716 | Msa0736870:CDS | 45.0% | |
!! | TATTATATTATCTATATAAA+AGG | + | chr5_1:53532531-53532550 | Msa0736870:intron | 5.0% |
CTGGAGAGCTGTCCCTAAAT+TGG | + | chr5_1:53531313-53531332 | Msa0736870:CDS | 50.0% | |
AGAGCTGTCCCTAAATTGGC+AGG | + | chr5_1:53531317-53531336 | Msa0736870:CDS | 50.0% | |
!! | TGGGTGAAATGGTTGGTGAG+GGG | - | chr5_1:53531913-53531932 | None:intergenic | 50.0% |
!! | CTGGGTGAAATGGTTGGTGA+GGG | - | chr5_1:53531914-53531933 | None:intergenic | 50.0% |
! | ACTGGGTGAAATGGTTGGTG+AGG | - | chr5_1:53531915-53531934 | None:intergenic | 50.0% |
GAGCTTCCTGTCTTCCTCTG+CGG | - | chr5_1:53531261-53531280 | None:intergenic | 55.0% | |
CATGCAGGGCTACTAAGGTG+TGG | + | chr5_1:53531766-53531785 | Msa0736870:intron | 55.0% | |
! | TGGACTGGGGTTCAAACACC+CGG | - | chr5_1:53532659-53532678 | None:intergenic | 55.0% |
AAAAGGGCCATGGACCGCAG+AGG | + | chr5_1:53531244-53531263 | Msa0736870:CDS | 60.0% | |
CTGTCTTCCTCTGCGGTCCA+TGG | - | chr5_1:53531254-53531273 | None:intergenic | 60.0% | |
CATGGACCGCAGAGGAAGAC+AGG | + | chr5_1:53531252-53531271 | Msa0736870:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 53531101 | 53533751 | 53531101 | ID=Msa0736870;Name=Msa0736870 |
chr5_1 | mRNA | 53531101 | 53533751 | 53531101 | ID=Msa0736870-mRNA-1;Parent=Msa0736870;Name=Msa0736870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=105|1|0.66|1|1|1|3|0|327 |
chr5_1 | exon | 53531101 | 53531338 | 53531101 | ID=Msa0736870-mRNA-1:exon:15078;Parent=Msa0736870-mRNA-1 |
chr5_1 | exon | 53531773 | 53531902 | 53531773 | ID=Msa0736870-mRNA-1:exon:15079;Parent=Msa0736870-mRNA-1 |
chr5_1 | exon | 53533031 | 53533751 | 53533031 | ID=Msa0736870-mRNA-1:exon:15080;Parent=Msa0736870-mRNA-1 |
chr5_1 | five_prime_UTR | 53531101 | 53531205 | 53531101 | ID=Msa0736870-mRNA-1:five_prime_utr;Parent=Msa0736870-mRNA-1 |
chr5_1 | CDS | 53531206 | 53531338 | 53531206 | ID=Msa0736870-mRNA-1:cds;Parent=Msa0736870-mRNA-1 |
chr5_1 | CDS | 53531773 | 53531902 | 53531773 | ID=Msa0736870-mRNA-1:cds;Parent=Msa0736870-mRNA-1 |
chr5_1 | CDS | 53533031 | 53533751 | 53533031 | ID=Msa0736870-mRNA-1:cds;Parent=Msa0736870-mRNA-1 |
Gene Sequence |
Protein sequence |