AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0556010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556010 MtrunA17_Chr4g0043121 97.170 424 12 0 1 424 1 424 0.0 851
Msa0556010 MtrunA17_Chr3g0115931 54.485 602 248 10 26 611 99 690 0.0 673
Msa0556010 MtrunA17_Chr5g0426281 52.181 619 260 10 12 611 71 672 0.0 664
Msa0556010 MtrunA17_Chr4g0043131 98.378 185 3 0 427 611 1 185 3.20e-132 384
Msa0556010 MtrunA17_Chr1g0187601 35.130 538 297 11 84 598 89 597 1.81e-103 326
Msa0556010 MtrunA17_Chr1g0167381 34.915 527 292 9 84 587 90 588 3.01e-103 326
Msa0556010 MtrunA17_Chr1g0183721 32.646 582 341 12 52 606 25 582 3.41e-103 325
Msa0556010 MtrunA17_Chr8g0388881 32.275 567 319 16 73 608 87 619 5.17e-99 315
Msa0556010 MtrunA17_Chr3g0112341 34.539 553 302 15 84 610 151 669 1.07e-98 315
Msa0556010 MtrunA17_Chr1g0171781 33.713 614 346 19 22 608 23 602 3.44e-97 309
Msa0556010 MtrunA17_Chr7g0246681 32.437 558 322 10 75 610 64 588 2.73e-96 306
Msa0556010 MtrunA17_Chr4g0055031 31.774 620 355 16 24 608 16 602 1.43e-94 303
Msa0556010 MtrunA17_Chr8g0369481 33.519 540 310 13 89 606 73 585 1.88e-94 302
Msa0556010 MtrunA17_Chr8g0361791 32.616 558 327 11 72 608 70 599 2.11e-94 302
Msa0556010 MtrunA17_Chr1g0203741 33.704 540 302 15 89 600 95 606 2.61e-92 297
Msa0556010 MtrunA17_Chr8g0350391 32.911 553 315 15 85 608 104 629 2.64e-92 297
Msa0556010 MtrunA17_Chr5g0435751 33.394 554 287 14 81 607 120 618 3.85e-92 296
Msa0556010 MtrunA17_Chr5g0416991 31.598 557 333 13 72 608 70 598 1.34e-91 295
Msa0556010 MtrunA17_Chr1g0159741 33.087 541 302 16 95 608 151 658 1.44e-91 296
Msa0556010 MtrunA17_Chr3g0092501 32.768 531 308 13 84 596 83 582 4.97e-91 293
Msa0556010 MtrunA17_Chr7g0246701 33.152 552 308 15 88 608 103 624 8.94e-91 293
Msa0556010 MtrunA17_Chr8g0350351 31.720 558 326 11 73 608 75 599 4.35e-90 290
Msa0556010 MtrunA17_Chr7g0214551 32.130 554 315 14 82 603 39 563 1.15e-89 288
Msa0556010 MtrunA17_Chr6g0472571 32.216 537 310 13 89 600 108 615 1.45e-89 290
Msa0556010 MtrunA17_Chr5g0409411 32.321 560 328 12 71 606 55 587 1.17e-87 284
Msa0556010 MtrunA17_Chr3g0125511 31.876 549 301 17 96 610 234 743 1.10e-79 267
Msa0556010 MtrunA17_Chr5g0437501 29.472 587 329 18 54 590 41 592 8.97e-78 258
Msa0556010 MtrunA17_Chr3g0113981 31.610 503 283 18 128 610 208 669 1.27e-77 259
Msa0556010 MtrunA17_Chr3g0130381 33.704 540 291 20 95 604 268 770 3.89e-77 261
Msa0556010 MtrunA17_Chr8g0384431 32.061 524 292 18 95 588 298 787 2.16e-75 256
Msa0556010 MtrunA17_Chr1g0155141 31.099 537 304 19 91 606 205 696 4.92e-73 248
Msa0556010 MtrunA17_Chr8g0372471 31.169 539 305 17 95 606 387 886 4.58e-71 246
Msa0556010 MtrunA17_Chr5g0404761 32.394 284 146 8 338 596 1 263 5.13e-39 144
Msa0556010 MtrunA17_Chr5g0404771 32.301 226 136 5 95 315 329 542 3.57e-32 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556010 AT2G03480.1 67.537 613 190 5 1 611 1 606 0.0 863
Msa0556010 AT2G03480.2 67.210 613 181 5 1 611 1 595 0.0 863
Msa0556010 AT1G13860.4 66.775 614 182 6 8 611 2 603 0.0 858
Msa0556010 AT1G13860.3 66.775 614 182 6 8 611 2 603 0.0 858
Msa0556010 AT1G13860.1 66.775 614 182 6 8 611 2 603 0.0 858
Msa0556010 AT1G13860.5 66.775 614 182 6 8 611 2 603 0.0 858
Msa0556010 AT1G13860.2 71.652 448 117 4 173 611 1 447 0.0 689
Msa0556010 AT1G78240.1 55.323 573 234 9 55 611 115 681 0.0 658
Msa0556010 AT1G78240.2 55.323 573 234 9 55 611 115 681 0.0 658
Msa0556010 AT2G03480.3 65.375 413 139 4 1 411 1 411 0.0 559
Msa0556010 AT3G23300.2 33.977 621 360 14 14 609 7 602 2.75e-107 336
Msa0556010 AT3G23300.1 33.977 621 360 14 14 609 7 602 2.75e-107 336
Msa0556010 AT5G14430.1 34.167 600 330 15 17 587 13 576 7.84e-105 330
Msa0556010 AT2G39750.1 34.712 556 311 14 77 610 168 693 3.98e-104 330
Msa0556010 AT5G14430.2 33.833 600 332 15 17 587 13 576 1.16e-103 327
Msa0556010 AT5G04060.1 35.145 552 309 16 77 608 74 596 1.44e-103 326
Msa0556010 AT5G06050.1 35.368 557 302 16 77 608 140 663 5.00e-103 327
Msa0556010 AT4G14360.1 34.087 531 299 10 80 587 70 572 1.97e-101 321
Msa0556010 AT4G14360.2 34.087 531 299 10 80 587 70 572 1.97e-101 321
Msa0556010 AT3G10200.1 34.489 548 312 16 81 608 67 587 4.81e-100 317
Msa0556010 AT1G77260.1 33.392 572 317 15 62 606 119 653 3.71e-99 316
Msa0556010 AT1G31850.1 32.973 555 311 14 81 606 71 593 1.47e-98 313
Msa0556010 AT1G31850.2 32.973 555 311 14 81 606 71 593 1.47e-98 313
Msa0556010 AT1G31850.4 32.973 555 311 14 81 606 71 593 1.47e-98 313
Msa0556010 AT1G31850.3 32.973 555 311 14 81 606 71 593 1.47e-98 313
Msa0556010 AT4G19120.1 33.452 562 315 13 69 606 61 587 2.77e-98 312
Msa0556010 AT4G19120.2 33.452 562 315 13 69 606 61 587 2.77e-98 312
Msa0556010 AT1G04430.1 33.521 534 314 9 84 599 82 592 7.23e-98 312
Msa0556010 AT1G04430.3 33.521 534 314 9 84 599 82 592 7.23e-98 312
Msa0556010 AT1G04430.2 33.521 534 314 9 84 599 82 592 7.23e-98 312
Msa0556010 AT2G43200.2 35.393 534 288 16 88 595 93 595 7.30e-95 303
Msa0556010 AT2G43200.1 35.393 534 288 16 88 595 93 595 7.30e-95 303
Msa0556010 AT4G10440.1 30.671 626 364 16 22 608 21 615 1.45e-94 303
Msa0556010 AT1G33170.1 32.609 552 309 15 89 608 113 633 4.38e-92 297
Msa0556010 AT3G10200.2 34.104 519 294 16 61 562 51 538 1.72e-91 295
Msa0556010 AT4G00740.1 30.918 621 357 15 20 610 16 594 9.39e-91 293
Msa0556010 AT4G00740.2 30.918 621 357 15 20 610 16 594 9.39e-91 293
Msa0556010 AT1G26850.2 32.021 559 325 11 77 608 77 607 2.87e-90 292
Msa0556010 AT1G26850.1 32.021 559 325 11 77 608 77 607 2.87e-90 292
Msa0556010 AT2G45750.1 33.026 542 306 14 89 600 90 604 3.83e-89 289
Msa0556010 AT4G00750.1 31.884 552 316 13 89 611 99 619 4.62e-88 286
Msa0556010 AT4G18030.1 29.032 620 370 15 23 608 19 602 2.73e-83 273
Msa0556010 AT3G56080.1 31.561 583 344 16 28 590 48 595 7.65e-83 272
Msa0556010 AT2G40280.1 30.528 606 350 20 33 610 20 582 5.53e-82 269
Msa0556010 AT2G34300.2 32.821 521 285 16 114 606 271 754 1.95e-81 272
Msa0556010 AT2G34300.3 32.821 521 285 16 114 606 271 754 1.95e-81 272
Msa0556010 AT2G34300.1 32.821 521 285 16 114 606 271 754 1.95e-81 272
Msa0556010 AT1G29470.1 32.472 542 299 18 95 606 250 754 2.86e-80 269
Msa0556010 AT1G29470.2 32.472 542 299 18 95 606 250 754 2.86e-80 269
Msa0556010 AT1G19430.1 31.793 541 308 19 88 609 223 721 6.89e-76 256
Msa0556010 AT1G19430.3 31.793 541 308 19 88 609 223 721 6.89e-76 256
Msa0556010 AT5G64030.1 31.499 527 297 16 95 591 308 800 7.10e-74 253
Msa0556010 AT3G51070.1 30.403 546 314 15 95 610 381 890 1.74e-72 250
Msa0556010 AT3G56080.2 31.599 538 313 16 28 545 48 550 7.73e-71 239
Msa0556010 AT4G19120.3 31.290 473 268 11 69 518 61 499 2.04e-70 236
Msa0556010 AT3G51070.2 31.237 477 265 13 95 541 381 824 3.42e-63 223
Msa0556010 AT1G26850.3 29.306 447 265 8 77 499 77 496 1.01e-54 194
Msa0556010 AT1G19430.2 28.431 408 238 15 88 477 223 594 1.02e-36 145

Find 217 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGCGTGATTAGTATTT+TGG 0.127843 4_1:-54012560 Msa0556010:CDS
TCGAAGGAATTGGGAGAATT+AGG 0.154357 4_1:+54012902 None:intergenic
AATATTAACCAGTTCAATTT+TGG 0.173409 4_1:+54012580 None:intergenic
TTTATGAAGACATGCATTTC+TGG 0.194109 4_1:-54009447 Msa0556010:CDS
CAGTGGCGAATTCACGATTT+TGG 0.204937 4_1:-54012653 Msa0556010:five_prime_UTR
CAGGGAACGGATTGTTTAAT+TGG 0.219789 4_1:-54007485 Msa0556010:three_prime_UTR
TTTCTCTAAGTGCTTTAATT+AGG 0.236415 4_1:-54007158 Msa0556010:three_prime_UTR
GCGTGTAGCTGTTGATTATT+TGG 0.241569 4_1:-54012437 Msa0556010:CDS
TCTTCATCTCCAGGTCTCTT+TGG 0.249505 4_1:+54009367 None:intergenic
TTGGCTTTCATTACATTGTT+TGG 0.251762 4_1:-54012541 Msa0556010:CDS
AATTGGGAGAATTAGGGTTT+TGG 0.262755 4_1:+54012909 None:intergenic
GGGTTTGAATGCTGCATTGC+TGG 0.274702 4_1:-54009287 Msa0556010:CDS
CGAAGGAATTGGGAGAATTA+GGG 0.285769 4_1:+54012903 None:intergenic
GCCCTATCATCTCCGCAATT+TGG 0.286356 4_1:+54011803 None:intergenic
ACAACTGAATCGCAATGATT+TGG 0.290713 4_1:+54012798 None:intergenic
ATGGACATGAGTTCTAATTA+TGG 0.292273 4_1:-54009310 Msa0556010:CDS
CAGCATGATAGACTTATTCT+TGG 0.317399 4_1:-54008375 Msa0556010:CDS
GGTTTGAAGCAGAAGGAGTT+AGG 0.318276 4_1:-54012391 Msa0556010:CDS
TGTGAATGGCCACGAAATTC+AGG 0.321344 4_1:-54007212 Msa0556010:three_prime_UTR
TTTGTTGTCACTTAAAATAA+TGG 0.323120 4_1:-54011494 Msa0556010:CDS
AATTGTGGGTTTGGTAGCTT+TGG 0.324928 4_1:-54011523 Msa0556010:CDS
GATCAGCTGTAGATAATTAT+TGG 0.329962 4_1:-54009423 Msa0556010:CDS
ACATTCCGGATCATGTTATA+TGG 0.330347 4_1:+54009334 None:intergenic
AGACGAAAGAAATTGATCTT+TGG 0.330539 4_1:+54012156 None:intergenic
TTCAAATCCAGACAACAAAT+TGG 0.335570 4_1:+54012318 None:intergenic
AAAGATCAATTTCTTTCGTC+TGG 0.336418 4_1:-54012154 Msa0556010:CDS
ACTTCAATCTTTACCACAAT+AGG 0.339398 4_1:-54007433 Msa0556010:three_prime_UTR
TGCTGGGTATGCTCTTCCAT+TGG 0.347288 4_1:+54010021 None:intergenic
AAGGATAATCTTCATCTTGC+TGG 0.349161 4_1:-54007129 Msa0556010:three_prime_UTR
GTGCTCAATGTGGCATCATT+TGG 0.350445 4_1:-54011336 Msa0556010:CDS
TGCTTTAATTAGGTTGGTTA+AGG 0.353806 4_1:-54007148 Msa0556010:three_prime_UTR
TTGAAGATTGAGAAAGGAAA+TGG 0.358150 4_1:+54012941 None:intergenic
CCGGTTGGGTCCAAACTGTT+TGG 0.361560 4_1:+54012991 None:intergenic
TCATATGATAATGATGGATA+TGG 0.362326 4_1:+54011370 None:intergenic
ATATAAAAGTCTCATCTTGC+TGG 0.378566 4_1:+54009977 None:intergenic
CGCCAAATTGCGGAGATGAT+AGG 0.378623 4_1:-54011805 Msa0556010:CDS
TTGAGCAATGTCGATCGATT+AGG 0.381554 4_1:+54012829 None:intergenic
CAGGATGGTTTGATCTTTGA+CGG 0.384835 4_1:-54011844 Msa0556010:CDS
TGGACATGAGTTCTAATTAT+GGG 0.384989 4_1:-54009309 Msa0556010:CDS
CAACTGAATCGCAATGATTT+GGG 0.385544 4_1:+54012799 None:intergenic
ACGAATCGGATCGAAGGAAT+TGG 0.385584 4_1:+54012892 None:intergenic
CAACAACAATCCAAACAGTT+TGG 0.386384 4_1:-54013001 Msa0556010:five_prime_UTR
GCTGGGTATGCTCTTCCATT+GGG 0.388868 4_1:+54010022 None:intergenic
GGACGGAGGTAGTATATATA+AGG 0.389279 4_1:-54013065 Msa0556010:intron
GGAGCGTCCAACAGAGTTGC+TGG 0.390872 4_1:+54010004 None:intergenic
GTAACTGCCAATTTGTTGTC+TGG 0.393469 4_1:-54012325 Msa0556010:CDS
ATCTCGAACGCTAAGATTCA+TGG 0.394359 4_1:-54012772 Msa0556010:five_prime_UTR
CTGGACATTAATTGTGGGTT+TGG 0.405139 4_1:-54011532 Msa0556010:CDS
CAGAAGGAGTTAGGGCTTTG+TGG 0.406998 4_1:-54012382 Msa0556010:CDS
TAACATGATCCGGAATGTTA+TGG 0.408722 4_1:-54009329 Msa0556010:CDS
TGGCATCATTTGGGATGAAA+AGG 0.417107 4_1:-54011326 Msa0556010:CDS
TCATGAATGTTGTTCCTGCC+AGG 0.420013 4_1:-54009243 Msa0556010:CDS
CTCAAGTACGTTGGGAAGCC+AGG 0.421484 4_1:-54008005 Msa0556010:CDS
AACTCATGTCCATAACATTC+CGG 0.426140 4_1:+54009320 None:intergenic
GTGAAGAAGAGCGCTAATTC+CGG 0.426628 4_1:+54012972 None:intergenic
CATCTCCAGGTCTCTTTGGA+TGG 0.427344 4_1:+54009371 None:intergenic
TGTTCATCTGTCATGGTGAT+TGG 0.432532 4_1:+54007893 None:intergenic
TTTATTTCTTTATTGTTCAT+CGG 0.437362 4_1:-54007280 Msa0556010:three_prime_UTR
AAATTCCGTTACGTTGGCCT+AGG 0.440632 4_1:-54012216 Msa0556010:CDS
TGAAGATTGAGAAAGGAAAT+GGG 0.441466 4_1:+54012942 None:intergenic
GGCAGTGGATCTTCATCTCC+AGG 0.442838 4_1:+54009358 None:intergenic
TATGATCTGCTTCATGCAAA+TGG 0.446445 4_1:-54008428 Msa0556010:CDS
TAGGGCTTTGTGGAAAAGAA+AGG 0.449648 4_1:-54012372 Msa0556010:CDS
TCTAAGTGCTTTAATTAGGT+TGG 0.450217 4_1:-54007154 Msa0556010:three_prime_UTR
GCCCTAAACCAAAATTGAAC+TGG 0.452625 4_1:-54012588 Msa0556010:CDS
AGAGGCCTTCCTGCTATGAT+TGG 0.454300 4_1:-54011415 Msa0556010:CDS
ACGAAATTCAGGAATGAACT+TGG 0.454309 4_1:-54007201 Msa0556010:three_prime_UTR
AATGAAAACACGAAACGAAT+CGG 0.458168 4_1:+54012878 None:intergenic
TGATTCTTCGCCTAGGAGAC+AGG 0.459410 4_1:-54012497 Msa0556010:CDS
TGCTCAATGTGGCATCATTT+GGG 0.461662 4_1:-54011335 Msa0556010:CDS
TGGTCATGAGAAGCTCTTTG+TGG 0.464411 4_1:-54012633 Msa0556010:exon
ATGTCTTCATAAAACTCTTC+AGG 0.464893 4_1:+54009457 None:intergenic
AAGTTCATTCCTGAATTTCG+TGG 0.465781 4_1:+54007203 None:intergenic
TTGCTGGTGTTATGCATGAC+TGG 0.467884 4_1:-54009183 Msa0556010:intron
GCTATTCAACTATGTAAAGA+TGG 0.468832 4_1:-54009726 Msa0556010:CDS
ATCACCTACGAGCAAGCTAC+AGG 0.468915 4_1:-54010079 Msa0556010:CDS
TCAATATCTTGAACCTATTG+TGG 0.471294 4_1:+54007420 None:intergenic
ATGGCAGAAGACTGCTGACC+TGG 0.472019 4_1:-54009956 Msa0556010:CDS
TGCCTCCATATAACATGATC+CGG 0.474515 4_1:-54009339 Msa0556010:CDS
CGAATCGGATCGAAGGAATT+GGG 0.475512 4_1:+54012893 None:intergenic
ATTTGAACAAGGGGAGGAGC+TGG 0.476097 4_1:-54012302 Msa0556010:CDS
AAGTCTCATCTTGCTGGGCT+AGG 0.477504 4_1:+54009983 None:intergenic
GCCAAATTGCGGAGATGATA+GGG 0.478531 4_1:-54011804 Msa0556010:CDS
GCTGGATTGCAATACAAAAC+AGG 0.478590 4_1:-54009641 Msa0556010:CDS
GTTACGTTGGCCTAGGGGTA+GGG 0.480364 4_1:-54012209 Msa0556010:CDS
GTGTTTGGTTCGTCCTCCTA+AGG 0.480788 4_1:-54012245 Msa0556010:CDS
GGATGGTCAGAGAAAATTAG+TGG 0.482184 4_1:+54009388 None:intergenic
CTATTCAACTATGTAAAGAT+GGG 0.483883 4_1:-54009725 Msa0556010:CDS
CTGAAATCTGTTTCCAGCGG+TGG 0.483902 4_1:-54012412 Msa0556010:CDS
AAGGGAAGGAGATCGGTGTT+TGG 0.483912 4_1:-54012260 Msa0556010:CDS
AGGGCTTTGTGGAAAAGAAA+GGG 0.485039 4_1:-54012371 Msa0556010:CDS
CTAGGGGTAGGGATATTATA+TGG 0.485149 4_1:-54012198 Msa0556010:CDS
ACTTATTCTTGGAGATGGAC+AGG 0.485529 4_1:-54008364 Msa0556010:CDS
CTTCCTCTCATACTCGATAG+AGG 0.487965 4_1:-54009208 Msa0556010:CDS
GTTTGAAGCAGAAGGAGTTA+GGG 0.490196 4_1:-54012390 Msa0556010:CDS
ATAAGCGAAGCCTGTCTCCT+AGG 0.490669 4_1:+54012487 None:intergenic
CCACTTGTACCATGTATAAG+TGG 0.492254 4_1:-54009678 Msa0556010:CDS
CGTTACGTTGGCCTAGGGGT+AGG 0.493314 4_1:-54012210 Msa0556010:CDS
CTATGCTGGACATTAATTGT+GGG 0.497181 4_1:-54011537 Msa0556010:CDS
CCAAACAGTTTGGACCCAAC+CGG 0.500408 4_1:-54012991 Msa0556010:five_prime_UTR
ATCATATGTCCGTGGGTAGG+TGG 0.501666 4_1:+54008445 None:intergenic
CGTCTGGAAGTATGACCAAA+AGG 0.505305 4_1:-54012138 Msa0556010:intron
GGTTTGTGTAGCGGCATATG+AGG 0.505589 4_1:-54011470 Msa0556010:CDS
ATGGTACTACGATAGGTTCA+TGG 0.506764 4_1:-54012753 Msa0556010:five_prime_UTR
CATGAATGTTGTTCCTGCCA+GGG 0.508876 4_1:-54009242 Msa0556010:CDS
GTGAGATTGAAGATTGAGAA+AGG 0.511578 4_1:+54012935 None:intergenic
ACTTGCAACTCAAGTACGTT+GGG 0.511754 4_1:-54008013 Msa0556010:CDS
CAGCGGTGGTTTGAAGCAGA+AGG 0.512739 4_1:-54012398 Msa0556010:CDS
CTCAATCGTTCCCACTGTAT+CGG 0.516495 4_1:+54008047 None:intergenic
GATAGACTTATTCTTGGAGA+TGG 0.517219 4_1:-54008369 Msa0556010:CDS
GATCTCCTTCCCTTGACACT+TGG 0.518861 4_1:+54012269 None:intergenic
CAAACCATCCTGTGAGTGAA+AGG 0.520104 4_1:+54011855 None:intergenic
TCAAATTGCCTTTCACTCAC+AGG 0.521415 4_1:-54011863 Msa0556010:CDS
AATTCCGTTACGTTGGCCTA+GGG 0.522095 4_1:-54012215 Msa0556010:CDS
GTTGACCGTGTTCTTAAACC+TGG 0.522848 4_1:-54010120 Msa0556010:CDS
ATAACAGGTTCGAACTATGC+TGG 0.522963 4_1:-54011551 Msa0556010:intron
GCTCTTTGTGGAACAAATTG+TGG 0.523628 4_1:-54012621 Msa0556010:CDS
TCATATGTCCGTGGGTAGGT+GGG 0.527301 4_1:+54008446 None:intergenic
AGCATACCCAGCAACTCTGT+TGG 0.527719 4_1:-54010011 Msa0556010:CDS
AATATAAAATTCCGTTACGT+TGG 0.527837 4_1:-54012222 Msa0556010:CDS
GTCCGTGGGTAGGTGGGGAA+AGG 0.530884 4_1:+54008452 None:intergenic
ATGAAGTTGCCAATCATAGC+AGG 0.530957 4_1:+54011406 None:intergenic
AAGAAACTGTAGATTGTGAA+AGG 0.532454 4_1:-54007398 Msa0556010:three_prime_UTR
ATTCTGAAGATCAATTATCC+TGG 0.533193 4_1:+54007987 None:intergenic
AACAAGGGGAGGAGCTGGAT+CGG 0.533252 4_1:-54012297 Msa0556010:CDS
GAAGAGCGCTAATTCCGGTT+GGG 0.534003 4_1:+54012977 None:intergenic
GTAGCGGCATATGAGGCAAC+TGG 0.534791 4_1:-54011463 Msa0556010:CDS
GTTAAAACAAAATATCCTCC+AGG 0.535765 4_1:+54010102 None:intergenic
ACTATGCTGGACATTAATTG+TGG 0.536421 4_1:-54011538 Msa0556010:CDS
CGAAATTCAGGAATGAACTT+GGG 0.536683 4_1:-54007200 Msa0556010:three_prime_UTR
TTCATCTTGCTGGAATGCCA+CGG 0.539993 4_1:-54007119 Msa0556010:three_prime_UTR
TGTACTCAATTCAGAATCAA+AGG 0.544658 4_1:+54009617 None:intergenic
TATAAAAGTCTCATCTTGCT+GGG 0.545662 4_1:+54009978 None:intergenic
TCTCAAGAGACAATTGAACT+TGG 0.546341 4_1:+54011437 None:intergenic
GGACATGAGTTCTAATTATG+GGG 0.548684 4_1:-54009308 Msa0556010:CDS
TTGTTGTCTGGATTTGAACA+AGG 0.549133 4_1:-54012313 Msa0556010:CDS
ACCTGGACTGTTATGCATCT+CGG 0.551387 4_1:-54009939 Msa0556010:intron
GTGGGACGTCTAGCAAGCGC+TGG 0.552130 4_1:-54009659 Msa0556010:CDS
CTAGACGTCCCACTTATACA+TGG 0.553190 4_1:+54009669 None:intergenic
ATCGGCACTGCCAAGTGTCA+AGG 0.555573 4_1:-54012279 Msa0556010:CDS
ACCGAGATGCATAACAGTCC+AGG 0.555849 4_1:+54009938 None:intergenic
AGGAAGTGCATTATAAGCCC+TGG 0.557714 4_1:+54009225 None:intergenic
TGTGGTAAAGATTGAAGTCA+AGG 0.557946 4_1:+54007438 None:intergenic
CACGAAACGAATCGGATCGA+AGG 0.558810 4_1:+54012886 None:intergenic
CTTCTGCTTCAAACCACCGC+TGG 0.559201 4_1:+54012399 None:intergenic
CATATGTCCGTGGGTAGGTG+GGG 0.559461 4_1:+54008447 None:intergenic
TCATCTTGCTGGAATGCCAC+GGG 0.559838 4_1:-54007118 Msa0556010:three_prime_UTR
GGTAGGGATATTATATGGAG+TGG 0.560775 4_1:-54012193 Msa0556010:CDS
ATCATGTTATATGGAGGCAG+TGG 0.561709 4_1:+54009343 None:intergenic
CAAGCTACAGGGTTCATCGC+GGG 0.562738 4_1:-54010067 Msa0556010:CDS
ATTGCGGAGATGATAGGGCT+AGG 0.563796 4_1:-54011799 Msa0556010:CDS
AAAGCACTTAGAGAAAGTAA+AGG 0.563904 4_1:+54007165 None:intergenic
AGGCGAAGAATCAATCGCAT+TGG 0.564383 4_1:+54012507 None:intergenic
GGCATCATTTGGGATGAAAA+GGG 0.564906 4_1:-54011325 Msa0556010:intron
TACACCAGCTTGAGGAAGCT+CGG 0.564927 4_1:+54011768 None:intergenic
AAGTATCACGTTGAACCCAA+TGG 0.567548 4_1:-54010037 Msa0556010:CDS
AAGATTCATGGTACTACGAT+AGG 0.568604 4_1:-54012760 Msa0556010:five_prime_UTR
AAGTGTCAAGGGAAGGAGAT+CGG 0.570175 4_1:-54012267 Msa0556010:CDS
CACTTGCAACTCAAGTACGT+TGG 0.574089 4_1:-54008014 Msa0556010:CDS
AGGATAATTGATCTTCAGAA+TGG 0.576325 4_1:-54007985 Msa0556010:CDS
ATTGAGAAAGGAAATGGGAA+TGG 0.579924 4_1:+54012947 None:intergenic
GATACCGAGCTTCCTCAAGC+TGG 0.584097 4_1:-54011772 Msa0556010:CDS
AACCTTTCCCCACCTACCCA+CGG 0.584376 4_1:-54008454 Msa0556010:CDS
TGTTGTCTGGATTTGAACAA+GGG 0.584953 4_1:-54012312 Msa0556010:CDS
AATAATGGCGGTTTGTGTAG+CGG 0.585041 4_1:-54011479 Msa0556010:CDS
GTAGGGATATTATATGGAGT+GGG 0.586026 4_1:-54012192 Msa0556010:CDS
CACTGCCAAGTGTCAAGGGA+AGG 0.586851 4_1:-54012274 Msa0556010:CDS
AAAATTGTGTTCATCTGTCA+TGG 0.586965 4_1:+54007886 None:intergenic
TCTTAATTCGTCAAATTCAG+TGG 0.590787 4_1:-54012670 Msa0556010:five_prime_UTR
ATGCGATTGATTCTTCGCCT+AGG 0.593349 4_1:-54012504 Msa0556010:CDS
AGAAGAGCGCTAATTCCGGT+TGG 0.594110 4_1:+54012976 None:intergenic
ATTGCCTTTCACTCACAGGA+TGG 0.595160 4_1:-54011859 Msa0556010:CDS
TCTGACCATCCAAAGAGACC+TGG 0.597424 4_1:-54009376 Msa0556010:CDS
GAGCGTCCAACAGAGTTGCT+GGG 0.597757 4_1:+54010005 None:intergenic
GTTCAATTGTCTCTTGAGAG+AGG 0.597892 4_1:-54011433 Msa0556010:CDS
TCGGCACTGCCAAGTGTCAA+GGG 0.598276 4_1:-54012278 Msa0556010:CDS
AGATTACTCTCGCCAAATTG+CGG 0.598637 4_1:-54011815 Msa0556010:CDS
GTCTGGATTTGAACAAGGGG+AGG 0.599371 4_1:-54012308 Msa0556010:CDS
TTATTTATACAAATTACAGA+AGG 0.601455 4_1:-54012468 Msa0556010:CDS
TTTCATTCAATCAATTCCGC+CGG 0.602867 4_1:-54012862 Msa0556010:five_prime_UTR
GTTGTCACTTAAAATAATGG+CGG 0.607184 4_1:-54011491 Msa0556010:CDS
ATCCTCCAGGTTTAAGAACA+CGG 0.611539 4_1:+54010115 None:intergenic
GACATGAGTTCTAATTATGG+GGG 0.612104 4_1:-54009307 Msa0556010:CDS
ACCATGTCATATGATAATGA+TGG 0.612723 4_1:+54011364 None:intergenic
GAACACGGTCAACTTCTATG+AGG 0.612831 4_1:+54010130 None:intergenic
CACTTGTACCATGTATAAGT+GGG 0.613526 4_1:-54009677 Msa0556010:CDS
AGTGCATTATAAGCCCTGGC+AGG 0.615051 4_1:+54009229 None:intergenic
TGAAGCAGATCATATGTCCG+TGG 0.620399 4_1:+54008437 None:intergenic
CCACTTATACATGGTACAAG+TGG 0.623728 4_1:+54009678 None:intergenic
AAACCTCTATCGAGTATGAG+AGG 0.624690 4_1:+54009205 None:intergenic
CATATAATATCCCTACCCCT+AGG 0.626144 4_1:+54012199 None:intergenic
GTTGTCTGGATTTGAACAAG+GGG 0.627393 4_1:-54012311 Msa0556010:CDS
GAAATTCAGGAATGAACTTG+GGG 0.628975 4_1:-54007199 Msa0556010:three_prime_UTR
TCTGGCAAACAAGTAACCGC+TGG 0.630480 4_1:+54007956 None:intergenic
GAAGCAGATCATATGTCCGT+GGG 0.637899 4_1:+54008438 None:intergenic
GAGAAAGGAAATGGGAATGG+TGG 0.638271 4_1:+54012950 None:intergenic
CAGATCATATGTCCGTGGGT+AGG 0.645203 4_1:+54008442 None:intergenic
TCGATTAGGATTCAGATCGC+CGG 0.647415 4_1:+54012843 None:intergenic
GAGCTGAAATCTGTTTCCAG+CGG 0.647557 4_1:-54012415 Msa0556010:CDS
TACAGTGGGAACGATTGAGA+TGG 0.647875 4_1:-54008043 Msa0556010:CDS
TTTGAATGCTGCATTGCTGG+AGG 0.649123 4_1:-54009284 Msa0556010:CDS
ATTCCGTTACGTTGGCCTAG+GGG 0.651302 4_1:-54012214 Msa0556010:CDS
TTCCGGATCATGTTATATGG+AGG 0.654047 4_1:+54009337 None:intergenic
TTCAGAATGGCAGTGACCAG+CGG 0.655775 4_1:-54007972 Msa0556010:CDS
GGAAGACTTACACCAGCTTG+AGG 0.658019 4_1:+54011760 None:intergenic
TATTCAACTATGTAAAGATG+GGG 0.658313 4_1:-54009724 Msa0556010:CDS
GAACCCTGTAGCTTGCTCGT+AGG 0.661400 4_1:+54010075 None:intergenic
TCACCTACGAGCAAGCTACA+GGG 0.664233 4_1:-54010078 Msa0556010:CDS
TCCATCATTATCATATGACA+TGG 0.664798 4_1:-54011365 Msa0556010:CDS
GACCGTGTTCTTAAACCTGG+AGG 0.671928 4_1:-54010117 Msa0556010:CDS
CTACCCCTAGGCCAACGTAA+CGG 0.672375 4_1:+54012211 None:intergenic
ATTAGGATTCAGATCGCCGG+CGG 0.678477 4_1:+54012846 None:intergenic
AGTTGCCAATCATAGCAGGA+AGG 0.692650 4_1:+54011410 None:intergenic
TTGGCAGTTACATTGTGACA+AGG 0.692917 4_1:+54012337 None:intergenic
GCAAGCTACAGGGTTCATCG+CGG 0.701719 4_1:-54010068 Msa0556010:CDS
GGACAGGATACTACGACCAG+AGG 0.704211 4_1:-54008348 Msa0556010:intron
ATGGTTCACTGTGCTCAATG+TGG 0.736335 4_1:-54011346 Msa0556010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTATAATAAATA+GGG - chr4_1:54007283-54007302 Msa0556010:three_prime_UTR 10.0%
!!! TTTGATTTTTGAATTTTTTT+TGG - chr4_1:54007756-54007775 Msa0556010:intron 10.0%
!! TAATAATATTGAACTATTAA+TGG - chr4_1:54009823-54009842 Msa0556010:intron 10.0%
!!! TATGTTTATTTATCTTTTAT+AGG - chr4_1:54009924-54009943 Msa0556010:intron 10.0%
!! CTTGAATTAAAAAAAAAAAA+AGG + chr4_1:54011649-54011668 None:intergenic 10.0%
!!! CTTTTTTTTTTTTTAATTCA+AGG - chr4_1:54011647-54011666 Msa0556010:intron 10.0%
!!! TCATTGTTAATTTTTTTTTA+AGG - chr4_1:54012189-54012208 Msa0556010:CDS 10.0%
!! ATGTTGAAAACATAAAATTA+GGG + chr4_1:54007242-54007261 None:intergenic 15.0%
!! GAAAAAGATGTATAATAAAT+AGG - chr4_1:54007282-54007301 Msa0556010:three_prime_UTR 15.0%
!! AAAAGATGTATAATAAATAG+GGG - chr4_1:54007284-54007303 Msa0556010:three_prime_UTR 15.0%
!! TTATTTATACAAATTACAGA+AGG - chr4_1:54007998-54008017 Msa0556010:CDS 15.0%
!!! AAAAGTAATGTAGTTTTTAT+TGG - chr4_1:54008489-54008508 Msa0556010:intron 15.0%
!!! TATTTTGTTCATAATATAAC+AGG - chr4_1:54008900-54008919 Msa0556010:intron 15.0%
!!! AAAAGGGTAATTTTTTTATT+AGG - chr4_1:54009157-54009176 Msa0556010:intron 15.0%
!!! CTTTTGTATATATTTTGTAA+CGG - chr4_1:54009449-54009468 Msa0556010:CDS 15.0%
!! TTATATCATCTAAATATGTT+TGG - chr4_1:54010074-54010093 Msa0556010:CDS 15.0%
!!! GATTATTTTATTGCTTAAAA+TGG - chr4_1:54011519-54011538 Msa0556010:CDS 15.0%
!!! ATATTTTGACATTTAATTCA+AGG - chr4_1:54011604-54011623 Msa0556010:intron 15.0%
!!! ATTTTTTCAAAAATAGTTTC+TGG + chr4_1:54012531-54012550 None:intergenic 15.0%
!!! TTTATTTCTTTATTGTTCAT+CGG - chr4_1:54013186-54013205 Msa0556010:intron 15.0%
!!! TTCCCGTTATTTTTTTAAAA+AGG + chr4_1:54007158-54007177 None:intergenic 20.0%
!! CATGTTGAAAACATAAAATT+AGG + chr4_1:54007243-54007262 None:intergenic 20.0%
!! GACAAAAAAAATTCTCAAAA+GGG - chr4_1:54007366-54007385 Msa0556010:three_prime_UTR 20.0%
!!! AATATTAACCAGTTCAATTT+TGG + chr4_1:54007889-54007908 None:intergenic 20.0%
!!! TTTGTTGTCACTTAAAATAA+TGG - chr4_1:54008972-54008991 Msa0556010:intron 20.0%
!! ATCTAGTAAAACTGTATAAA+CGG + chr4_1:54009728-54009747 None:intergenic 20.0%
!! TTAATAAATACATAGACTAC+TGG + chr4_1:54010046-54010065 None:intergenic 20.0%
!! ACCAATCAAATGAATTAATT+AGG - chr4_1:54010140-54010159 Msa0556010:CDS 20.0%
!! TCCTAATTAATTCATTTGAT+TGG + chr4_1:54010144-54010163 None:intergenic 20.0%
!!! AAGGATATTTTTATTAGTGT+AGG - chr4_1:54010551-54010570 Msa0556010:intron 20.0%
!! ATAAAGAGAAATTCATGAAA+AGG + chr4_1:54010973-54010992 None:intergenic 20.0%
!! TCTATAATTTATAAACTGAC+TGG - chr4_1:54011342-54011361 Msa0556010:CDS 20.0%
!! TATTGCTTAAAATGGTTTAA+TGG - chr4_1:54011527-54011546 Msa0556010:CDS 20.0%
!!! TGCTTTTTAAAGGAAATTAT+TGG + chr4_1:54011694-54011713 None:intergenic 20.0%
!! ATAGTACATATAGTCATATA+CGG - chr4_1:54011720-54011739 Msa0556010:intron 20.0%
!! GAAAAAACAAACTGAATTTA+TGG + chr4_1:54011762-54011781 None:intergenic 20.0%
!! AAACAAAATTAAGAAGCTAA+GGG + chr4_1:54011797-54011816 None:intergenic 20.0%
!! TTTCAAATTCATTCTCAAAA+GGG + chr4_1:54011820-54011839 None:intergenic 20.0%
!!! AATTTTTTTTTAAGGTGTAG+TGG - chr4_1:54012197-54012216 Msa0556010:CDS 20.0%
!! ATAATTGTTTATAAGCAAGT+TGG - chr4_1:54012289-54012308 Msa0556010:CDS 20.0%
!! ACGATGTGTATTAAAAAATT+AGG + chr4_1:54012372-54012391 None:intergenic 20.0%
!!! TTTTCTTGATTTGGTAAAAA+TGG - chr4_1:54012656-54012675 Msa0556010:five_prime_UTR 20.0%
!!! TTTCTTGATTTGGTAAAAAT+GGG - chr4_1:54012657-54012676 Msa0556010:five_prime_UTR 20.0%
!!! TTAGTTAGTTTAAAACATCA+TGG - chr4_1:54012687-54012706 Msa0556010:five_prime_UTR 20.0%
!!! CAATTCATTTTTTTTTGTCA+AGG - chr4_1:54013110-54013129 Msa0556010:intron 20.0%
!! AAAAAATGCTAACAAGATAT+TGG + chr4_1:54013158-54013177 None:intergenic 20.0%
! TTAAAAAGGCCCTATAATTA+GGG + chr4_1:54007144-54007163 None:intergenic 25.0%
! TTTAAAAAGGCCCTATAATT+AGG + chr4_1:54007145-54007164 None:intergenic 25.0%
!!! GGGCCTTTTTAAAAAAATAA+CGG - chr4_1:54007152-54007171 Msa0556010:three_prime_UTR 25.0%
!!! GGCCTTTTTAAAAAAATAAC+GGG - chr4_1:54007153-54007172 Msa0556010:three_prime_UTR 25.0%
! ATGTAGTTGAAAATAGCAAA+AGG - chr4_1:54007329-54007348 Msa0556010:three_prime_UTR 25.0%
! TGTAGTTGAAAATAGCAAAA+GGG - chr4_1:54007330-54007349 Msa0556010:three_prime_UTR 25.0%
! GGACAAAAAAAATTCTCAAA+AGG - chr4_1:54007365-54007384 Msa0556010:three_prime_UTR 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG - chr4_1:54007380-54007399 Msa0556010:three_prime_UTR 25.0%
!! AACAAATTGTGGATGATTTT+CGG - chr4_1:54007856-54007875 Msa0556010:intron 25.0%
!! ATTAAGCGTGATTAGTATTT+TGG - chr4_1:54007906-54007925 Msa0556010:three_prime_UTR 25.0%
!! AACGGAATTTTATATTCCTT+AGG + chr4_1:54008240-54008259 None:intergenic 25.0%
! AATATAAAATTCCGTTACGT+TGG - chr4_1:54008244-54008263 Msa0556010:intron 25.0%
!!! GATTCAATGGTTTTTAAGTT+TGG - chr4_1:54008447-54008466 Msa0556010:CDS 25.0%
!! TAGTTTTTATTGGATCTTTG+TGG - chr4_1:54008499-54008518 Msa0556010:intron 25.0%
!! AGTTTTTATTGGATCTTTGT+GGG - chr4_1:54008500-54008519 Msa0556010:intron 25.0%
!!! AATCACCAGTTTTTGTTTTT+TGG - chr4_1:54008738-54008757 Msa0556010:intron 25.0%
!!! ATCACCAGTTTTTGTTTTTT+GGG - chr4_1:54008739-54008758 Msa0556010:intron 25.0%
! CATTAATGACAATTTAGAAG+AGG + chr4_1:54008845-54008864 None:intergenic 25.0%
!!! TCATATGATAATGATGGATA+TGG + chr4_1:54009099-54009118 None:intergenic 25.0%
!! TTTTGCGTATATTTTGTAAC+CGG + chr4_1:54009361-54009380 None:intergenic 25.0%
! TCAAAGAAAGTTGTTGTATT+TGG - chr4_1:54009386-54009405 Msa0556010:CDS 25.0%
!!! GATGTATTTGGTTCAAATTT+TGG + chr4_1:54009413-54009432 None:intergenic 25.0%
!! ACCAAATACATCAATTTTGT+TGG - chr4_1:54009421-54009440 Msa0556010:CDS 25.0%
! TCCAACAAAATTGATGTATT+TGG + chr4_1:54009425-54009444 None:intergenic 25.0%
!! TTGTATATATTTTGTAACGG+AGG - chr4_1:54009452-54009471 Msa0556010:CDS 25.0%
!!! TGTATATATTTTGTAACGGA+GGG - chr4_1:54009453-54009472 Msa0556010:CDS 25.0%
!! ATTTTATATCTCTAACACAC+AGG + chr4_1:54009591-54009610 None:intergenic 25.0%
!! ATCCAACAATTCAAGTTTAT+GGG - chr4_1:54009625-54009644 Msa0556010:CDS 25.0%
! TTAAAAGTAATAACGTGTCA+AGG + chr4_1:54009660-54009679 None:intergenic 25.0%
! TAGATTTCAGAACTAAATAG+TGG - chr4_1:54009743-54009762 Msa0556010:intron 25.0%
! AGATTTCAGAACTAAATAGT+GGG - chr4_1:54009744-54009763 Msa0556010:intron 25.0%
! GTTTGGATTTATTAAATCAC+AGG - chr4_1:54010091-54010110 Msa0556010:CDS 25.0%
! GAAGAAAAAGAAAGATAATG+GGG + chr4_1:54010171-54010190 None:intergenic 25.0%
! GGAAGAAAAAGAAAGATAAT+GGG + chr4_1:54010172-54010191 None:intergenic 25.0%
! TGGAAGAAAAAGAAAGATAA+TGG + chr4_1:54010173-54010192 None:intergenic 25.0%
! CTTATGTTATAGAAAAGTCA+TGG + chr4_1:54010241-54010260 None:intergenic 25.0%
!! CATGACTTTTCTATAACATA+AGG - chr4_1:54010239-54010258 Msa0556010:intron 25.0%
! CTATTCAACTATGTAAAGAT+GGG - chr4_1:54010741-54010760 Msa0556010:intron 25.0%
! TATTCAACTATGTAAAGATG+GGG - chr4_1:54010742-54010761 Msa0556010:intron 25.0%
! GAATTTCTCTTTATTATTGC+AGG - chr4_1:54010979-54010998 Msa0556010:intron 25.0%
! TAGTACATATAGTCATATAC+GGG - chr4_1:54011721-54011740 Msa0556010:intron 25.0%
! GAAACAAAATTAAGAAGCTA+AGG + chr4_1:54011798-54011817 None:intergenic 25.0%
! CTTTCAAATTCATTCTCAAA+AGG + chr4_1:54011821-54011840 None:intergenic 25.0%
! CAAAGCTCTTTGTAAAATAA+TGG - chr4_1:54011927-54011946 Msa0556010:intron 25.0%
! AAATGTTGATATTGATCTTC+AGG - chr4_1:54011985-54012004 Msa0556010:intron 25.0%
! TTCATTTCACTATTCAAACT+GGG - chr4_1:54012629-54012648 Msa0556010:CDS 25.0%
!! TTTTGATCTGACAATATTAC+AGG + chr4_1:54012835-54012854 None:intergenic 25.0%
! TCACTATTTATACGATTTCA+GGG - chr4_1:54012963-54012982 Msa0556010:five_prime_UTR 25.0%
!!! TTTTTGAGAAAGAATGTGAA+TGG - chr4_1:54013240-54013259 Msa0556010:intron 25.0%
! TTTCTCTAAGTGCTTTAATT+AGG - chr4_1:54013308-54013327 Msa0556010:intron 25.0%
! AATAACGGGAATTAAGATAG+TGG - chr4_1:54007167-54007186 Msa0556010:three_prime_UTR 30.0%
! AGCAAAAGGGTCTTATAAAA+AGG - chr4_1:54007343-54007362 Msa0556010:three_prime_UTR 30.0%
! GCAAAAGGGTCTTATAAAAA+GGG - chr4_1:54007344-54007363 Msa0556010:three_prime_UTR 30.0%
! CTCAAAAGGGTCTTATAATT+AGG - chr4_1:54007379-54007398 Msa0556010:three_prime_UTR 30.0%
TGAAGATTGAGAAAGGAAAT+GGG + chr4_1:54007527-54007546 None:intergenic 30.0%
TTGAAGATTGAGAAAGGAAA+TGG + chr4_1:54007528-54007547 None:intergenic 30.0%
AATGAAAACACGAAACGAAT+CGG + chr4_1:54007591-54007610 None:intergenic 30.0%
TCTTAATTCGTCAAATTCAG+TGG - chr4_1:54007796-54007815 Msa0556010:intron 30.0%
!!! ACCAGTTCAATTTTGGTTTA+GGG + chr4_1:54007882-54007901 None:intergenic 30.0%
!!! AACCAGTTCAATTTTGGTTT+AGG + chr4_1:54007883-54007902 None:intergenic 30.0%
! TTGGCTTTCATTACATTGTT+TGG - chr4_1:54007925-54007944 Msa0556010:exon 30.0%
TTCAAATCCAGACAACAAAT+TGG + chr4_1:54008151-54008170 None:intergenic 30.0%
! GGAATTTTATATTCCTTAGG+AGG + chr4_1:54008237-54008256 None:intergenic 30.0%
AGACGAAAGAAATTGATCTT+TGG + chr4_1:54008313-54008332 None:intergenic 30.0%
AAAGATCAATTTCTTTCGTC+TGG - chr4_1:54008312-54008331 Msa0556010:intron 30.0%
TAGTTACAGACAACTTACAA+GGG + chr4_1:54008421-54008440 None:intergenic 30.0%
! GTAACTACTGATTGATTCAA+TGG - chr4_1:54008434-54008453 Msa0556010:CDS 30.0%
!!! TGGTTTTTAAGTTTGGATGA+TGG - chr4_1:54008454-54008473 Msa0556010:CDS 30.0%
!!! TCACCAGTTTTTGTTTTTTG+GGG - chr4_1:54008740-54008759 Msa0556010:intron 30.0%
GACAATTTAGAAGAGGATAT+AGG + chr4_1:54008838-54008857 None:intergenic 30.0%
! GTTGTCACTTAAAATAATGG+CGG - chr4_1:54008975-54008994 Msa0556010:intron 30.0%
TCCATCATTATCATATGACA+TGG - chr4_1:54009101-54009120 Msa0556010:intron 30.0%
! ACCATGTCATATGATAATGA+TGG + chr4_1:54009105-54009124 None:intergenic 30.0%
! TTTGCGTATATTTTGTAACC+GGG + chr4_1:54009360-54009379 None:intergenic 30.0%
! CTGAAACCAATTATTGATTG+AGG - chr4_1:54009523-54009542 Msa0556010:intron 30.0%
ACCAATCTGTATCATTTCAA+GGG + chr4_1:54009558-54009577 None:intergenic 30.0%
! AAATGATACAGATTGGTCAA+CGG - chr4_1:54009561-54009580 Msa0556010:intron 30.0%
AAACTTGAATTGTTGGATGA+AGG + chr4_1:54009623-54009642 None:intergenic 30.0%
! CATCCAACAATTCAAGTTTA+TGG - chr4_1:54009624-54009643 Msa0556010:CDS 30.0%
ATCCCATAAACTTGAATTGT+TGG + chr4_1:54009630-54009649 None:intergenic 30.0%
AGTAAAACTGTATAAACGGA+GGG + chr4_1:54009724-54009743 None:intergenic 30.0%
TAGTAAAACTGTATAAACGG+AGG + chr4_1:54009725-54009744 None:intergenic 30.0%
CTTAATGGAAAAGCTCTTTA+AGG + chr4_1:54009795-54009814 None:intergenic 30.0%
! TAAAGAGCTTTTCCATTAAG+AGG - chr4_1:54009795-54009814 Msa0556010:intron 30.0%
ATTATTAGCATGCCTCTTAA+TGG + chr4_1:54009810-54009829 None:intergenic 30.0%
TATGAGTATCTGCAATTAGA+AGG + chr4_1:54009852-54009871 None:intergenic 30.0%
! TAGGCTGATTTAAAATACCT+CGG - chr4_1:54009943-54009962 Msa0556010:CDS 30.0%
AATCATAAATGTTCCCTTCT+AGG + chr4_1:54009975-54009994 None:intergenic 30.0%
TGTTATAGAAAAGTCATGGA+AGG + chr4_1:54010237-54010256 None:intergenic 30.0%
ATAGCATTTCATACATAAGC+TGG + chr4_1:54010273-54010292 None:intergenic 30.0%
GTTAAAACAAAATATCCTCC+AGG + chr4_1:54010367-54010386 None:intergenic 30.0%
TATAAAAGTCTCATCTTGCT+GGG + chr4_1:54010491-54010510 None:intergenic 30.0%
ATATAAAAGTCTCATCTTGC+TGG + chr4_1:54010492-54010511 None:intergenic 30.0%
! AGCAAGATGAGACTTTTATA+TGG - chr4_1:54010491-54010510 Msa0556010:intron 30.0%
TTATCGTAGTAAGTGATCAA+CGG + chr4_1:54010665-54010684 None:intergenic 30.0%
GCTATTCAACTATGTAAAGA+TGG - chr4_1:54010740-54010759 Msa0556010:intron 30.0%
TGTACTCAATTCAGAATCAA+AGG + chr4_1:54010852-54010871 None:intergenic 30.0%
AAGGAAAAGCAGAACAAAAT+GGG + chr4_1:54010954-54010973 None:intergenic 30.0%
AAAGGAAAAGCAGAACAAAA+TGG + chr4_1:54010955-54010974 None:intergenic 30.0%
ATGTCTTCATAAAACTCTTC+AGG + chr4_1:54011012-54011031 None:intergenic 30.0%
TTTATGAAGACATGCATTTC+TGG - chr4_1:54011019-54011038 Msa0556010:intron 30.0%
GATCAGCTGTAGATAATTAT+TGG - chr4_1:54011043-54011062 Msa0556010:intron 30.0%
! ATGGACATGAGTTCTAATTA+TGG - chr4_1:54011156-54011175 Msa0556010:intron 30.0%
! TGGACATGAGTTCTAATTAT+GGG - chr4_1:54011157-54011176 Msa0556010:intron 30.0%
! ATACATTTATCAGGCTTTAG+TGG + chr4_1:54011406-54011425 None:intergenic 30.0%
GTAAGAGACATACATTTATC+AGG + chr4_1:54011415-54011434 None:intergenic 30.0%
TACCAAATAAGAAGTTGCTA+GGG + chr4_1:54011580-54011599 None:intergenic 30.0%
TTACCAAATAAGAAGTTGCT+AGG + chr4_1:54011581-54011600 None:intergenic 30.0%
AAAAAAAAAAAAGGGCAACC+CGG + chr4_1:54011640-54011659 None:intergenic 30.0%
!! CTATGTAGCATGCTTTTTAA+AGG + chr4_1:54011704-54011723 None:intergenic 30.0%
AGTACATATAGTCATATACG+GGG - chr4_1:54011722-54011741 Msa0556010:intron 30.0%
! GTAAAATAATGGTAATGCGT+AGG - chr4_1:54011938-54011957 Msa0556010:intron 30.0%
!!! ATACACATCGTTATTTTTGC+AGG - chr4_1:54012381-54012400 Msa0556010:CDS 30.0%
!!! TACACATCGTTATTTTTGCA+GGG - chr4_1:54012382-54012401 Msa0556010:CDS 30.0%
!!! ATCATTTTTTCCGATACAGT+GGG - chr4_1:54012409-54012428 Msa0556010:CDS 30.0%
! ATTCTGAAGATCAATTATCC+TGG + chr4_1:54012482-54012501 None:intergenic 30.0%
AGGATAATTGATCTTCAGAA+TGG - chr4_1:54012481-54012500 Msa0556010:CDS 30.0%
AAAATTGTGTTCATCTGTCA+TGG + chr4_1:54012583-54012602 None:intergenic 30.0%
!!! TGAACACAATTTTTTTGCTC+TGG - chr4_1:54012590-54012609 Msa0556010:CDS 30.0%
CTTCATTTCACTATTCAAAC+TGG - chr4_1:54012628-54012647 Msa0556010:CDS 30.0%
! CTGGGTAAATTTTCTTGATT+TGG - chr4_1:54012647-54012666 Msa0556010:exon 30.0%
AAAACAAGATCCATATCTGA+AGG + chr4_1:54012775-54012794 None:intergenic 30.0%
!! TTCAGATATGGATCTTGTTT+TGG - chr4_1:54012774-54012793 Msa0556010:five_prime_UTR 30.0%
AAACTCTGCAATTCAGAAAA+TGG - chr4_1:54012883-54012902 Msa0556010:five_prime_UTR 30.0%
GTCACTATTTATACGATTTC+AGG - chr4_1:54012962-54012981 Msa0556010:five_prime_UTR 30.0%
ATTTATACGATTTCAGGGAA+CGG - chr4_1:54012968-54012987 Msa0556010:five_prime_UTR 30.0%
ACTTCAATCTTTACCACAAT+AGG - chr4_1:54013033-54013052 Msa0556010:five_prime_UTR 30.0%
TCAATATCTTGAACCTATTG+TGG + chr4_1:54013049-54013068 None:intergenic 30.0%
AAGAAACTGTAGATTGTGAA+AGG - chr4_1:54013068-54013087 Msa0556010:intron 30.0%
TCACATTCTTTCTCAAAAAC+TGG + chr4_1:54013239-54013258 None:intergenic 30.0%
! AAAGCACTTAGAGAAAGTAA+AGG + chr4_1:54013304-54013323 None:intergenic 30.0%
TCTAAGTGCTTTAATTAGGT+TGG - chr4_1:54013312-54013331 Msa0556010:intron 30.0%
!! TGCTTTAATTAGGTTGGTTA+AGG - chr4_1:54013318-54013337 Msa0556010:intron 30.0%
! AAGGGTCTTATAATTAGGGA+CGG - chr4_1:54007384-54007403 Msa0556010:three_prime_UTR 35.0%
CAACAACAATCCAAACAGTT+TGG - chr4_1:54007465-54007484 Msa0556010:three_prime_UTR 35.0%
ATTGAGAAAGGAAATGGGAA+TGG + chr4_1:54007522-54007541 None:intergenic 35.0%
GTGAGATTGAAGATTGAGAA+AGG + chr4_1:54007534-54007553 None:intergenic 35.0%
! AATTGGGAGAATTAGGGTTT+TGG + chr4_1:54007560-54007579 None:intergenic 35.0%
TTTCATTCAATCAATTCCGC+CGG - chr4_1:54007604-54007623 Msa0556010:intron 35.0%
CAACTGAATCGCAATGATTT+GGG + chr4_1:54007670-54007689 None:intergenic 35.0%
ACAACTGAATCGCAATGATT+TGG + chr4_1:54007671-54007690 None:intergenic 35.0%
AAGATTCATGGTACTACGAT+AGG - chr4_1:54007706-54007725 Msa0556010:intron 35.0%
TTGTTGTCTGGATTTGAACA+AGG - chr4_1:54008153-54008172 Msa0556010:intron 35.0%
TGTTGTCTGGATTTGAACAA+GGG - chr4_1:54008154-54008173 Msa0556010:intron 35.0%
GTAGGGATATTATATGGAGT+GGG - chr4_1:54008274-54008293 Msa0556010:intron 35.0%
! CTTACAAGGGTTTGAAATTG+CGG + chr4_1:54008408-54008427 None:intergenic 35.0%
GTAGTTACAGACAACTTACA+AGG + chr4_1:54008422-54008441 None:intergenic 35.0%
! AGAAATCATCGCGACAATTT+TGG + chr4_1:54008558-54008577 None:intergenic 35.0%
GTTCCCCAAAAAACAAAAAC+TGG + chr4_1:54008746-54008765 None:intergenic 35.0%
!!! GACTGGTTTTGTACATAACA+TGG - chr4_1:54008782-54008801 Msa0556010:intron 35.0%
GTACATAACATGGTTCAGTA+CGG - chr4_1:54008792-54008811 Msa0556010:intron 35.0%
ACTATGCTGGACATTAATTG+TGG - chr4_1:54008928-54008947 Msa0556010:intron 35.0%
CTATGCTGGACATTAATTGT+GGG - chr4_1:54008929-54008948 Msa0556010:intron 35.0%
TCTCAAGAGACAATTGAACT+TGG + chr4_1:54009032-54009051 None:intergenic 35.0%
CTCTTTCATTCTTAGCTGAA+TGG - chr4_1:54009187-54009206 Msa0556010:CDS 35.0%
! GGTGCTTTATTAAGTCTGTA+AGG + chr4_1:54009217-54009236 None:intergenic 35.0%
ACTATACTGACAAAGATGGT+TGG + chr4_1:54009238-54009257 None:intergenic 35.0%
AGAGACTATACTGACAAAGA+TGG + chr4_1:54009242-54009261 None:intergenic 35.0%
! TTGCGTATATTTTGTAACCG+GGG + chr4_1:54009359-54009378 None:intergenic 35.0%
AGTAAGAGAGAAAACTGTGT+AGG - chr4_1:54009476-54009495 Msa0556010:intron 35.0%
GTAAGAGAGAAAACTGTGTA+GGG - chr4_1:54009477-54009496 Msa0556010:intron 35.0%
CTGATGCCTCAATCAATAAT+TGG + chr4_1:54009532-54009551 None:intergenic 35.0%
GACCAATCTGTATCATTTCA+AGG + chr4_1:54009559-54009578 None:intergenic 35.0%
! AGGCTGATTTAAAATACCTC+GGG - chr4_1:54009944-54009963 Msa0556010:CDS 35.0%
! TCTAGATCTAAGTCACTTTC+TGG - chr4_1:54009999-54010018 Msa0556010:CDS 35.0%
TGGAAAGAGCAAAAAGGAAA+AGG + chr4_1:54010213-54010232 None:intergenic 35.0%
ATAGAAAAGTCATGGAAGGA+TGG + chr4_1:54010233-54010252 None:intergenic 35.0%
CACTTGTACCATGTATAAGT+GGG - chr4_1:54010789-54010808 Msa0556010:intron 35.0%
AGAAATTTCAGAGAAGGAAG+AGG + chr4_1:54010929-54010948 None:intergenic 35.0%
TGGGAAAGAAATTTCAGAGA+AGG + chr4_1:54010935-54010954 None:intergenic 35.0%
ACATTCCGGATCATGTTATA+TGG + chr4_1:54011135-54011154 None:intergenic 35.0%
TAACATGATCCGGAATGTTA+TGG - chr4_1:54011137-54011156 Msa0556010:intron 35.0%
AACTCATGTCCATAACATTC+CGG + chr4_1:54011149-54011168 None:intergenic 35.0%
! GGACATGAGTTCTAATTATG+GGG - chr4_1:54011158-54011177 Msa0556010:intron 35.0%
! GACATGAGTTCTAATTATGG+GGG - chr4_1:54011159-54011178 Msa0556010:intron 35.0%
ATTGCTGGAGGAGAAAAAAT+CGG - chr4_1:54011194-54011213 Msa0556010:intron 35.0%
!! GAGTTAAGACTTTTGGTTGA+GGG - chr4_1:54011364-54011383 Msa0556010:CDS 35.0%
TTCCCTAGCAACTTCTTATT+TGG - chr4_1:54011575-54011594 Msa0556010:intron 35.0%
CAAAGAAGAGAATTCAGTGA+TGG + chr4_1:54011896-54011915 None:intergenic 35.0%
CATCACTGAATTCTCTTCTT+TGG - chr4_1:54011894-54011913 Msa0556010:intron 35.0%
TATGATCTGCTTCATGCAAA+TGG - chr4_1:54012038-54012057 Msa0556010:intron 35.0%
CAGCATGATAGACTTATTCT+TGG - chr4_1:54012091-54012110 Msa0556010:intron 35.0%
GATAGACTTATTCTTGGAGA+TGG - chr4_1:54012097-54012116 Msa0556010:intron 35.0%
ATAGACCTTCACATTACACT+GGG + chr4_1:54012345-54012364 None:intergenic 35.0%
!!! GATCATTTTTTCCGATACAG+TGG - chr4_1:54012408-54012427 Msa0556010:CDS 35.0%
!!! TCTTGTTTTGGCTCTAACAT+AGG - chr4_1:54012786-54012805 Msa0556010:five_prime_UTR 35.0%
!!! CTTGTTTTGGCTCTAACATA+GGG - chr4_1:54012787-54012806 Msa0556010:five_prime_UTR 35.0%
AATATTACAGGATGACACAC+GGG + chr4_1:54012823-54012842 None:intergenic 35.0%
CAATATTACAGGATGACACA+CGG + chr4_1:54012824-54012843 None:intergenic 35.0%
TAGGAGGACTTTAGTTATCA+AGG + chr4_1:54012862-54012881 None:intergenic 35.0%
TTCTGAATTGCAGAGTTTCT+AGG + chr4_1:54012881-54012900 None:intergenic 35.0%
TTCAGATGTATGCTATAGCT+AGG + chr4_1:54012935-54012954 None:intergenic 35.0%
TGTGGTAAAGATTGAAGTCA+AGG + chr4_1:54013031-54013050 None:intergenic 35.0%
AAGTTCATTCCTGAATTTCG+TGG + chr4_1:54013266-54013285 None:intergenic 35.0%
ACGAAATTCAGGAATGAACT+TGG - chr4_1:54013265-54013284 Msa0556010:intron 35.0%
CGAAATTCAGGAATGAACTT+GGG - chr4_1:54013266-54013285 Msa0556010:intron 35.0%
GAAATTCAGGAATGAACTTG+GGG - chr4_1:54013267-54013286 Msa0556010:intron 35.0%
AAGGATAATCTTCATCTTGC+TGG - chr4_1:54013337-54013356 Msa0556010:intron 35.0%
TACCTCCGTCCCTAATTATA+GGG - chr4_1:54007132-54007151 Msa0556010:three_prime_UTR 40.0%
AAAGGCCCTATAATTAGGGA+CGG + chr4_1:54007140-54007159 None:intergenic 40.0%
GGACGGAGGTAGTATATATA+AGG - chr4_1:54007401-54007420 Msa0556010:three_prime_UTR 40.0%
CGAAGGAATTGGGAGAATTA+GGG + chr4_1:54007566-54007585 None:intergenic 40.0%
TCGAAGGAATTGGGAGAATT+AGG + chr4_1:54007567-54007586 None:intergenic 40.0%
TTGAGCAATGTCGATCGATT+AGG + chr4_1:54007640-54007659 None:intergenic 40.0%
ATCTCGAACGCTAAGATTCA+TGG - chr4_1:54007694-54007713 Msa0556010:intron 40.0%
ATGGTACTACGATAGGTTCA+TGG - chr4_1:54007713-54007732 Msa0556010:intron 40.0%
GCTCTTTGTGGAACAAATTG+TGG - chr4_1:54007845-54007864 Msa0556010:intron 40.0%
GCCCTAAACCAAAATTGAAC+TGG - chr4_1:54007878-54007897 Msa0556010:three_prime_UTR 40.0%
! GCGTGTAGCTGTTGATTATT+TGG - chr4_1:54008029-54008048 Msa0556010:CDS 40.0%
! GTTTGAAGCAGAAGGAGTTA+GGG - chr4_1:54008076-54008095 Msa0556010:intron 40.0%
! TAGGGCTTTGTGGAAAAGAA+AGG - chr4_1:54008094-54008113 Msa0556010:intron 40.0%
! AGGGCTTTGTGGAAAAGAAA+GGG - chr4_1:54008095-54008114 Msa0556010:intron 40.0%
TTGGCAGTTACATTGTGACA+AGG + chr4_1:54008132-54008151 None:intergenic 40.0%
!! GTAACTGCCAATTTGTTGTC+TGG - chr4_1:54008141-54008160 Msa0556010:intron 40.0%
GTTGTCTGGATTTGAACAAG+GGG - chr4_1:54008155-54008174 Msa0556010:intron 40.0%
CATATAATATCCCTACCCCT+AGG + chr4_1:54008270-54008289 None:intergenic 40.0%
CTAGGGGTAGGGATATTATA+TGG - chr4_1:54008268-54008287 Msa0556010:intron 40.0%
GGTAGGGATATTATATGGAG+TGG - chr4_1:54008273-54008292 Msa0556010:intron 40.0%
!! GTATGACCAAAAGGTACTCT+CGG - chr4_1:54008337-54008356 Msa0556010:intron 40.0%
!!! CTAATACCGAGAGTACCTTT+TGG + chr4_1:54008346-54008365 None:intergenic 40.0%
!! GCGACAATTTTGGTAAGTGA+CGG + chr4_1:54008548-54008567 None:intergenic 40.0%
ATTGTCGCGATGATTTCTCT+AGG - chr4_1:54008560-54008579 Msa0556010:intron 40.0%
TCAAATTGCCTTTCACTCAC+AGG - chr4_1:54008603-54008622 Msa0556010:intron 40.0%
CAGGATGGTTTGATCTTTGA+CGG - chr4_1:54008622-54008641 Msa0556010:intron 40.0%
AGATTACTCTCGCCAAATTG+CGG - chr4_1:54008651-54008670 Msa0556010:intron 40.0%
AAACTGGTGATTATGACGAG+TGG + chr4_1:54008730-54008749 None:intergenic 40.0%
ATAACAGGTTCGAACTATGC+TGG - chr4_1:54008915-54008934 Msa0556010:intron 40.0%
CTGGACATTAATTGTGGGTT+TGG - chr4_1:54008934-54008953 Msa0556010:intron 40.0%
! AATTGTGGGTTTGGTAGCTT+TGG - chr4_1:54008943-54008962 Msa0556010:intron 40.0%
AATAATGGCGGTTTGTGTAG+CGG - chr4_1:54008987-54009006 Msa0556010:intron 40.0%
GTTCAATTGTCTCTTGAGAG+AGG - chr4_1:54009033-54009052 Msa0556010:intron 40.0%
ATGAAGTTGCCAATCATAGC+AGG + chr4_1:54009063-54009082 None:intergenic 40.0%
TGCTCAATGTGGCATCATTT+GGG - chr4_1:54009131-54009150 Msa0556010:intron 40.0%
! TGGCATCATTTGGGATGAAA+AGG - chr4_1:54009140-54009159 Msa0556010:intron 40.0%
! GGCATCATTTGGGATGAAAA+GGG - chr4_1:54009141-54009160 Msa0556010:intron 40.0%
TTTGATGAGAAATACTCCCC+CGG - chr4_1:54009339-54009358 Msa0556010:CDS 40.0%
! TGCGTATATTTTGTAACCGG+GGG + chr4_1:54009358-54009377 None:intergenic 40.0%
TGTGTAGGGTGTACAGTATT+TGG - chr4_1:54009491-54009510 Msa0556010:intron 40.0%
GCCCTTGAAATGATACAGAT+TGG - chr4_1:54009554-54009573 Msa0556010:intron 40.0%
AAGAGTCGATAGAGATGCTA+TGG + chr4_1:54009896-54009915 None:intergenic 40.0%
AGGCAATGAGATCAAGAGAA+TGG + chr4_1:54010193-54010212 None:intergenic 40.0%
GAAGGATGGAAAGAGCAAAA+AGG + chr4_1:54010219-54010238 None:intergenic 40.0%
AGGTCATTGTTAGAGCTCAA+AGG + chr4_1:54010296-54010315 None:intergenic 40.0%
AACATTCCATCTGCATGATG+AGG + chr4_1:54010316-54010335 None:intergenic 40.0%
ATCCTCCAGGTTTAAGAACA+CGG + chr4_1:54010354-54010373 None:intergenic 40.0%
AAGTATCACGTTGAACCCAA+TGG - chr4_1:54010429-54010448 Msa0556010:intron 40.0%
! TTACTAGCAGTAGTTGATGC+AGG + chr4_1:54010627-54010646 None:intergenic 40.0%
CCACTTATACATGGTACAAG+TGG + chr4_1:54010791-54010810 None:intergenic 40.0%
CCACTTGTACCATGTATAAG+TGG - chr4_1:54010788-54010807 Msa0556010:intron 40.0%
GCTGGATTGCAATACAAAAC+AGG - chr4_1:54010825-54010844 Msa0556010:intron 40.0%
ACAGCTGAGCTTGAAATTCA+TGG - chr4_1:54010869-54010888 Msa0556010:intron 40.0%
GGATGGTCAGAGAAAATTAG+TGG + chr4_1:54011081-54011100 None:intergenic 40.0%
ATCATGTTATATGGAGGCAG+TGG + chr4_1:54011126-54011145 None:intergenic 40.0%
TGCCTCCATATAACATGATC+CGG - chr4_1:54011127-54011146 Msa0556010:intron 40.0%
TTCCGGATCATGTTATATGG+AGG + chr4_1:54011132-54011151 None:intergenic 40.0%
AAACCTCTATCGAGTATGAG+AGG + chr4_1:54011264-54011283 None:intergenic 40.0%
! ATACTCGATAGAGGTTTTGC+TGG - chr4_1:54011267-54011286 Msa0556010:intron 40.0%
! CTGACTGGAGTTAAGACTTT+TGG - chr4_1:54011357-54011376 Msa0556010:CDS 40.0%
!! GGAGTTAAGACTTTTGGTTG+AGG - chr4_1:54011363-54011382 Msa0556010:CDS 40.0%
TATGTCTCTTACACTCTCAC+TGG - chr4_1:54011423-54011442 Msa0556010:CDS 40.0%
!! TTAAGAAGCTAAGGGTGTCT+TGG + chr4_1:54011789-54011808 None:intergenic 40.0%
GCATGGTGTTCCTTAGAATT+GGG + chr4_1:54011859-54011878 None:intergenic 40.0%
TGGAACTACAAAACAACGCA+TGG + chr4_1:54011876-54011895 None:intergenic 40.0%
ACTTATTCTTGGAGATGGAC+AGG - chr4_1:54012102-54012121 Msa0556010:intron 40.0%
AAACACCAAGATCATACCTC+TGG + chr4_1:54012137-54012156 None:intergenic 40.0%
GTGTACTTTCCATCCTCTTT+GGG - chr4_1:54012230-54012249 Msa0556010:CDS 40.0%
GATGAGATCATCCTTTCTGA+AGG + chr4_1:54012261-54012280 None:intergenic 40.0%
CATAGACCTTCACATTACAC+TGG + chr4_1:54012346-54012365 None:intergenic 40.0%
!!! CATCGTTATTTTTGCAGGGA+TGG - chr4_1:54012386-54012405 Msa0556010:CDS 40.0%
ACTTGCAACTCAAGTACGTT+GGG - chr4_1:54012453-54012472 Msa0556010:CDS 40.0%
TGTTCATCTGTCATGGTGAT+TGG + chr4_1:54012576-54012595 None:intergenic 40.0%
GATACAGACTCCTTCAGATA+TGG - chr4_1:54012762-54012781 Msa0556010:five_prime_UTR 40.0%
! TGAATTGCAGAGTTTCTAGG+AGG + chr4_1:54012878-54012897 None:intergenic 40.0%
!! CAGGGAACGGATTGTTTAAT+TGG - chr4_1:54012981-54013000 Msa0556010:five_prime_UTR 40.0%
CTACCTCCGTCCCTAATTAT+AGG - chr4_1:54007131-54007150 Msa0556010:three_prime_UTR 45.0%
! GGTCTTATAATTAGGGACGG+AGG - chr4_1:54007387-54007406 Msa0556010:three_prime_UTR 45.0%
!! GTGAAGAAGAGCGCTAATTC+CGG + chr4_1:54007497-54007516 None:intergenic 45.0%
GAGAAAGGAAATGGGAATGG+TGG + chr4_1:54007519-54007538 None:intergenic 45.0%
CGAATCGGATCGAAGGAATT+GGG + chr4_1:54007576-54007595 None:intergenic 45.0%
ACGAATCGGATCGAAGGAAT+TGG + chr4_1:54007577-54007596 None:intergenic 45.0%
TCGATTAGGATTCAGATCGC+CGG + chr4_1:54007626-54007645 None:intergenic 45.0%
! CAGTGGCGAATTCACGATTT+TGG - chr4_1:54007813-54007832 Msa0556010:intron 45.0%
TGGTCATGAGAAGCTCTTTG+TGG - chr4_1:54007833-54007852 Msa0556010:intron 45.0%
AGGCGAAGAATCAATCGCAT+TGG + chr4_1:54007962-54007981 None:intergenic 45.0%
! ATGCGATTGATTCTTCGCCT+AGG - chr4_1:54007962-54007981 Msa0556010:CDS 45.0%
GAGCTGAAATCTGTTTCCAG+CGG - chr4_1:54008051-54008070 Msa0556010:CDS 45.0%
! GGTTTGAAGCAGAAGGAGTT+AGG - chr4_1:54008075-54008094 Msa0556010:intron 45.0%
AAGTGTCAAGGGAAGGAGAT+CGG - chr4_1:54008199-54008218 Msa0556010:intron 45.0%
! AAATTCCGTTACGTTGGCCT+AGG - chr4_1:54008250-54008269 Msa0556010:intron 45.0%
! AATTCCGTTACGTTGGCCTA+GGG - chr4_1:54008251-54008270 Msa0556010:intron 45.0%
! CGTCTGGAAGTATGACCAAA+AGG - chr4_1:54008328-54008347 Msa0556010:intron 45.0%
ATTGCCTTTCACTCACAGGA+TGG - chr4_1:54008607-54008626 Msa0556010:intron 45.0%
CAAACCATCCTGTGAGTGAA+AGG + chr4_1:54008614-54008633 None:intergenic 45.0%
GCCAAATTGCGGAGATGATA+GGG - chr4_1:54008662-54008681 Msa0556010:intron 45.0%
! TGGGGAACCATGATGTTTTG+TGG - chr4_1:54008758-54008777 Msa0556010:intron 45.0%
! GGGGAACCATGATGTTTTGT+GGG - chr4_1:54008759-54008778 Msa0556010:intron 45.0%
! GGGAACCATGATGTTTTGTG+GGG - chr4_1:54008760-54008779 Msa0556010:intron 45.0%
AGTTGCCAATCATAGCAGGA+AGG + chr4_1:54009059-54009078 None:intergenic 45.0%
ATGGTTCACTGTGCTCAATG+TGG - chr4_1:54009120-54009139 Msa0556010:intron 45.0%
GTGCTCAATGTGGCATCATT+TGG - chr4_1:54009130-54009149 Msa0556010:intron 45.0%
TAAACGGAGGGTGACAAGTA+TGG + chr4_1:54009712-54009731 None:intergenic 45.0%
!! GGTTTGCTTTTGCCTGTTTG+TGG - chr4_1:54010020-54010039 Msa0556010:CDS 45.0%
ATAGACTACTGGCCACAAAC+AGG + chr4_1:54010035-54010054 None:intergenic 45.0%
CAATGACCTCATCATGCAGA+TGG - chr4_1:54010307-54010326 Msa0556010:intron 45.0%
GAACACGGTCAACTTCTATG+AGG + chr4_1:54010339-54010358 None:intergenic 45.0%
GTTGACCGTGTTCTTAAACC+TGG - chr4_1:54010346-54010365 Msa0556010:intron 45.0%
ACCTGGACTGTTATGCATCT+CGG - chr4_1:54010527-54010546 Msa0556010:intron 45.0%
GACTGTTATGCATCTCGGTA+AGG - chr4_1:54010532-54010551 Msa0556010:intron 45.0%
CTAGACGTCCCACTTATACA+TGG + chr4_1:54010800-54010819 None:intergenic 45.0%
TTTGAATGCTGCATTGCTGG+AGG - chr4_1:54011182-54011201 Msa0556010:intron 45.0%
TGGAGGAGAAAAAATCGGTG+TGG - chr4_1:54011199-54011218 Msa0556010:intron 45.0%
GGAGGAGAAAAAATCGGTGT+GGG - chr4_1:54011200-54011219 Msa0556010:intron 45.0%
TCATGAATGTTGTTCCTGCC+AGG - chr4_1:54011223-54011242 Msa0556010:intron 45.0%
CATGAATGTTGTTCCTGCCA+GGG - chr4_1:54011224-54011243 Msa0556010:intron 45.0%
! AGGAAGTGCATTATAAGCCC+TGG + chr4_1:54011244-54011263 None:intergenic 45.0%
CTTCCTCTCATACTCGATAG+AGG - chr4_1:54011258-54011277 Msa0556010:intron 45.0%
!! TTGCTGGTGTTATGCATGAC+TGG - chr4_1:54011283-54011302 Msa0556010:intron 45.0%
CGCATGGTGTTCCTTAGAAT+TGG + chr4_1:54011860-54011879 None:intergenic 45.0%
GAAGCAGATCATATGTCCGT+GGG + chr4_1:54012031-54012050 None:intergenic 45.0%
TGAAGCAGATCATATGTCCG+TGG + chr4_1:54012032-54012051 None:intergenic 45.0%
! TACGACCAGAGGTATGATCT+TGG - chr4_1:54012129-54012148 Msa0556010:intron 45.0%
CGTGTACTTTCCATCCTCTT+TGG - chr4_1:54012229-54012248 Msa0556010:CDS 45.0%
TTTGGGAGCAACCTTCAGAA+AGG - chr4_1:54012247-54012266 Msa0556010:CDS 45.0%
TCGATCCCAGTGTAATGTGA+AGG - chr4_1:54012337-54012356 Msa0556010:CDS 45.0%
CTCAATCGTTCCCACTGTAT+CGG + chr4_1:54012422-54012441 None:intergenic 45.0%
TACAGTGGGAACGATTGAGA+TGG - chr4_1:54012423-54012442 Msa0556010:CDS 45.0%
CACTTGCAACTCAAGTACGT+TGG - chr4_1:54012452-54012471 Msa0556010:CDS 45.0%
AGACCTTGAGTCTCACATGA+CGG + chr4_1:54012731-54012750 None:intergenic 45.0%
GTGAGACTCAAGGTCTGAAT+TGG - chr4_1:54012735-54012754 Msa0556010:five_prime_UTR 45.0%
TGTGAATGGCCACGAAATTC+AGG - chr4_1:54013254-54013273 Msa0556010:intron 45.0%
TTCATCTTGCTGGAATGCCA+CGG - chr4_1:54013347-54013366 Msa0556010:intron 45.0%
!! TTGAATTAAAAAAAAAAAAA+GGG + chr4_1:54011648-54011667 None:intergenic 5.0%
CCAAACAGTTTGGACCCAAC+CGG - chr4_1:54007475-54007494 Msa0556010:three_prime_UTR 50.0%
!! GAAGAGCGCTAATTCCGGTT+GGG + chr4_1:54007492-54007511 None:intergenic 50.0%
!! AGAAGAGCGCTAATTCCGGT+TGG + chr4_1:54007493-54007512 None:intergenic 50.0%
CACGAAACGAATCGGATCGA+AGG + chr4_1:54007583-54007602 None:intergenic 50.0%
ATTAGGATTCAGATCGCCGG+CGG + chr4_1:54007623-54007642 None:intergenic 50.0%
TGATTCTTCGCCTAGGAGAC+AGG - chr4_1:54007969-54007988 Msa0556010:CDS 50.0%
ATAAGCGAAGCCTGTCTCCT+AGG + chr4_1:54007982-54008001 None:intergenic 50.0%
CTGAAATCTGTTTCCAGCGG+TGG - chr4_1:54008054-54008073 Msa0556010:CDS 50.0%
CAGAAGGAGTTAGGGCTTTG+TGG - chr4_1:54008084-54008103 Msa0556010:intron 50.0%
GTCTGGATTTGAACAAGGGG+AGG - chr4_1:54008158-54008177 Msa0556010:intron 50.0%
ATTTGAACAAGGGGAGGAGC+TGG - chr4_1:54008164-54008183 Msa0556010:intron 50.0%
GATCTCCTTCCCTTGACACT+TGG + chr4_1:54008200-54008219 None:intergenic 50.0%
! AAGGGAAGGAGATCGGTGTT+TGG - chr4_1:54008206-54008225 Msa0556010:intron 50.0%
! GTGTTTGGTTCGTCCTCCTA+AGG - chr4_1:54008221-54008240 Msa0556010:intron 50.0%
! ATTCCGTTACGTTGGCCTAG+GGG - chr4_1:54008252-54008271 Msa0556010:intron 50.0%
CGCCAAATTGCGGAGATGAT+AGG - chr4_1:54008661-54008680 Msa0556010:intron 50.0%
GCCCTATCATCTCCGCAATT+TGG + chr4_1:54008666-54008685 None:intergenic 50.0%
ATTGCGGAGATGATAGGGCT+AGG - chr4_1:54008667-54008686 Msa0556010:intron 50.0%
TACACCAGCTTGAGGAAGCT+CGG + chr4_1:54008701-54008720 None:intergenic 50.0%
GGAAGACTTACACCAGCTTG+AGG + chr4_1:54008709-54008728 None:intergenic 50.0%
CCAGTCCCCACAAAACATCA+TGG + chr4_1:54008768-54008787 None:intergenic 50.0%
! CCATGATGTTTTGTGGGGAC+TGG - chr4_1:54008765-54008784 Msa0556010:intron 50.0%
GGTTTGTGTAGCGGCATATG+AGG - chr4_1:54008996-54009015 Msa0556010:intron 50.0%
AGAGGCCTTCCTGCTATGAT+TGG - chr4_1:54009051-54009070 Msa0556010:intron 50.0%
TACCTCGGGAAAGACCTAGA+AGG - chr4_1:54009958-54009977 Msa0556010:CDS 50.0%
ACCTCGGGAAAGACCTAGAA+GGG - chr4_1:54009959-54009978 Msa0556010:CDS 50.0%
GACCGTGTTCTTAAACCTGG+AGG - chr4_1:54010349-54010368 Msa0556010:intron 50.0%
ATCACCTACGAGCAAGCTAC+AGG - chr4_1:54010387-54010406 Msa0556010:intron 50.0%
TCACCTACGAGCAAGCTACA+GGG - chr4_1:54010388-54010407 Msa0556010:intron 50.0%
GCTGGGTATGCTCTTCCATT+GGG + chr4_1:54010447-54010466 None:intergenic 50.0%
TGCTGGGTATGCTCTTCCAT+TGG + chr4_1:54010448-54010467 None:intergenic 50.0%
AGCATACCCAGCAACTCTGT+TGG - chr4_1:54010455-54010474 Msa0556010:intron 50.0%
AAGTCTCATCTTGCTGGGCT+AGG + chr4_1:54010486-54010505 None:intergenic 50.0%
ACCGAGATGCATAACAGTCC+AGG + chr4_1:54010531-54010550 None:intergenic 50.0%
GGGTTTGAATGCTGCATTGC+TGG - chr4_1:54011179-54011198 Msa0556010:intron 50.0%
AGTGCATTATAAGCCCTGGC+AGG + chr4_1:54011240-54011259 None:intergenic 50.0%
AATTCAAGGCTCCAGTGCAC+CGG - chr4_1:54011618-54011637 Msa0556010:intron 50.0%
GCAGCATGCACCCAATTCTA+AGG - chr4_1:54011846-54011865 Msa0556010:CDS 50.0%
TCATATGTCCGTGGGTAGGT+GGG + chr4_1:54012023-54012042 None:intergenic 50.0%
ATCATATGTCCGTGGGTAGG+TGG + chr4_1:54012024-54012043 None:intergenic 50.0%
CAGATCATATGTCCGTGGGT+AGG + chr4_1:54012027-54012046 None:intergenic 50.0%
! TTCCTTTTTCCTGATCGCGC+TGG - chr4_1:54012160-54012179 Msa0556010:CDS 50.0%
TTCCAGCGCGATCAGGAAAA+AGG + chr4_1:54012165-54012184 None:intergenic 50.0%
TGAAACTTTCCAGCGCGATC+AGG + chr4_1:54012172-54012191 None:intergenic 50.0%
AAGGTTGCTCCCAAAGAGGA+TGG + chr4_1:54012242-54012261 None:intergenic 50.0%
TCTGAAGGTTGCTCCCAAAG+AGG + chr4_1:54012246-54012265 None:intergenic 50.0%
TTCAGAATGGCAGTGACCAG+CGG - chr4_1:54012494-54012513 Msa0556010:CDS 50.0%
TCTGGCAAACAAGTAACCGC+TGG + chr4_1:54012513-54012532 None:intergenic 50.0%
GACCTTGAGTCTCACATGAC+GGG + chr4_1:54012730-54012749 None:intergenic 50.0%
TCATCTTGCTGGAATGCCAC+GGG - chr4_1:54013348-54013367 Msa0556010:intron 50.0%
GGCCCTATAATTAGGGACGG+AGG + chr4_1:54007137-54007156 None:intergenic 55.0%
CCGGTTGGGTCCAAACTGTT+TGG + chr4_1:54007478-54007497 None:intergenic 55.0%
CTTCTGCTTCAAACCACCGC+TGG + chr4_1:54008070-54008089 None:intergenic 55.0%
! CAGCGGTGGTTTGAAGCAGA+AGG - chr4_1:54008068-54008087 Msa0556010:intron 55.0%
AACAAGGGGAGGAGCTGGAT+CGG - chr4_1:54008169-54008188 Msa0556010:intron 55.0%
ATCGGCACTGCCAAGTGTCA+AGG - chr4_1:54008187-54008206 Msa0556010:intron 55.0%
TCGGCACTGCCAAGTGTCAA+GGG - chr4_1:54008188-54008207 Msa0556010:intron 55.0%
CACTGCCAAGTGTCAAGGGA+AGG - chr4_1:54008192-54008211 Msa0556010:intron 55.0%
CTACCCCTAGGCCAACGTAA+CGG + chr4_1:54008258-54008277 None:intergenic 55.0%
! GTTACGTTGGCCTAGGGGTA+GGG - chr4_1:54008257-54008276 Msa0556010:intron 55.0%
GATACCGAGCTTCCTCAAGC+TGG - chr4_1:54008694-54008713 Msa0556010:intron 55.0%
GTAGCGGCATATGAGGCAAC+TGG - chr4_1:54009003-54009022 Msa0556010:intron 55.0%
TCCCTTCTAGGTCTTTCCCG+AGG + chr4_1:54009963-54009982 None:intergenic 55.0%
!! GAACCCTGTAGCTTGCTCGT+AGG + chr4_1:54010394-54010413 None:intergenic 55.0%
GCAAGCTACAGGGTTCATCG+CGG - chr4_1:54010398-54010417 Msa0556010:intron 55.0%
CAAGCTACAGGGTTCATCGC+GGG - chr4_1:54010399-54010418 Msa0556010:intron 55.0%
GAGCGTCCAACAGAGTTGCT+GGG + chr4_1:54010464-54010483 None:intergenic 55.0%
ATGGCAGAAGACTGCTGACC+TGG - chr4_1:54010510-54010529 Msa0556010:intron 55.0%
GGCAGTGGATCTTCATCTCC+AGG + chr4_1:54011111-54011130 None:intergenic 55.0%
ATTCAAGGCTCCAGTGCACC+GGG - chr4_1:54011619-54011638 Msa0556010:intron 55.0%
AACCTTTCCCCACCTACCCA+CGG - chr4_1:54012012-54012031 Msa0556010:intron 55.0%
CATATGTCCGTGGGTAGGTG+GGG + chr4_1:54012022-54012041 None:intergenic 55.0%
GGACAGGATACTACGACCAG+AGG - chr4_1:54012118-54012137 Msa0556010:intron 55.0%
CTCAAGTACGTTGGGAAGCC+AGG - chr4_1:54012461-54012480 Msa0556010:CDS 55.0%
TGCCCGTCATGTGAGACTCA+AGG - chr4_1:54012725-54012744 Msa0556010:five_prime_UTR 55.0%
! GGCTCTAACATAGGGTCCCA+CGG - chr4_1:54012795-54012814 Msa0556010:five_prime_UTR 55.0%
GCTCTAACATAGGGTCCCAC+GGG - chr4_1:54012796-54012815 Msa0556010:five_prime_UTR 55.0%
! CGTTACGTTGGCCTAGGGGT+AGG - chr4_1:54008256-54008275 Msa0556010:intron 60.0%
! GGAGCGTCCAACAGAGTTGC+TGG + chr4_1:54010465-54010484 None:intergenic 60.0%
AAAAGGGCAACCCGGTGCAC+TGG + chr4_1:54011632-54011651 None:intergenic 60.0%
GTGGGACGTCTAGCAAGCGC+TGG - chr4_1:54010807-54010826 Msa0556010:intron 65.0%
GTCCGTGGGTAGGTGGGGAA+AGG + chr4_1:54012017-54012036 None:intergenic 65.0%
GGATGACACACGGGACCCGT+GGG + chr4_1:54012814-54012833 None:intergenic 65.0%
AGGATGACACACGGGACCCG+TGG + chr4_1:54012815-54012834 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 54007108 54013380 54007108 ID=Msa0556010;Name=Msa0556010
chr4_1 mRNA 54007108 54013380 54007108 ID=Msa0556010-mRNA-1;Parent=Msa0556010;Name=Msa0556010-mRNA-1;_AED=0.08;_eAED=0.08;_QI=438|0.88|0.9|1|0.77|0.6|10|456|611
chr4_1 exon 54007108 54007504 54007108 ID=Msa0556010-mRNA-1:exon:15853;Parent=Msa0556010-mRNA-1
chr4_1 exon 54007877 54008085 54007877 ID=Msa0556010-mRNA-1:exon:15852;Parent=Msa0556010-mRNA-1
chr4_1 exon 54008349 54008481 54008349 ID=Msa0556010-mRNA-1:exon:15851;Parent=Msa0556010-mRNA-1
chr4_1 exon 54009184 54009487 54009184 ID=Msa0556010-mRNA-1:exon:15850;Parent=Msa0556010-mRNA-1
chr4_1 exon 54009622 54009758 54009622 ID=Msa0556010-mRNA-1:exon:15849;Parent=Msa0556010-mRNA-1
chr4_1 exon 54009940 54010162 54009940 ID=Msa0556010-mRNA-1:exon:15848;Parent=Msa0556010-mRNA-1
chr4_1 exon 54011326 54011566 54011326 ID=Msa0556010-mRNA-1:exon:15847;Parent=Msa0556010-mRNA-1
chr4_1 exon 54011771 54011906 54011771 ID=Msa0556010-mRNA-1:exon:15846;Parent=Msa0556010-mRNA-1
chr4_1 exon 54012139 54013072 54012139 ID=Msa0556010-mRNA-1:exon:15845;Parent=Msa0556010-mRNA-1
chr4_1 exon 54013365 54013380 54013365 ID=Msa0556010-mRNA-1:exon:15844;Parent=Msa0556010-mRNA-1
chr4_1 five_prime_UTR 54013365 54013380 54013365 ID=Msa0556010-mRNA-1:five_prime_utr;Parent=Msa0556010-mRNA-1
chr4_1 five_prime_UTR 54012651 54013072 54012651 ID=Msa0556010-mRNA-1:five_prime_utr;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54012139 54012650 54012139 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54011771 54011906 54011771 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54011326 54011566 54011326 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54009940 54010162 54009940 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54009622 54009758 54009622 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54009184 54009487 54009184 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54008349 54008481 54008349 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 CDS 54007936 54008085 54007936 ID=Msa0556010-mRNA-1:cds;Parent=Msa0556010-mRNA-1
chr4_1 three_prime_UTR 54007877 54007935 54007877 ID=Msa0556010-mRNA-1:three_prime_utr;Parent=Msa0556010-mRNA-1
chr4_1 three_prime_UTR 54007108 54007504 54007108 ID=Msa0556010-mRNA-1:three_prime_utr;Parent=Msa0556010-mRNA-1
Gene Sequence

>Msa0556010

ATGAGAAGCTCTTTGTGGAACAAATTGTGGATGATTTTCGGCCCTAAACCAAAATTGAACTGGTTAATATTAAGCGTGATTAGTATTTTGGCTTTCATTACATTGTTTGGTTCGTCATCTTCCAATGCGATTGATTCTTCGCCTAGGAGACAGGCTTCGCTTATTTATACAAATTACAGAAGGATTAAAGAGCGTGTAGCTGTTGATTATTTGGAGCTGAAATCTGTTTCCAGCGGTGGTTTGAAGCAGAAGGAGTTAGGGCTTTGTGGAAAAGAAAGGGAGAATTTTGTGCCTTGTCACAATGTAACTGCCAATTTGTTGTCTGGATTTGAACAAGGGGAGGAGCTGGATCGGCACTGCCAAGTGTCAAGGGAAGGAGATCGGTGTTTGGTTCGTCCTCCTAAGGAATATAAAATTCCGTTACGTTGGCCTAGGGGTAGGGATATTATATGGAGTGGGAATGTGAAGATAACCAAAGATCAATTTCTTTCGTCTGGAAGTATGACCAAAAGGTTGATGCTACTAGAAGAGAATCAAATTGCCTTTCACTCACAGGATGGTTTGATCTTTGACGGTGTGAAAGATTACTCTCGCCAAATTGCGGAGATGATAGGGCTAGGAAGTGATACCGAGCTTCCTCAAGCTGGTGTTCGAACTATGCTGGACATTAATTGTGGGTTTGGTAGCTTTGGAGCTCATTTGTTGTCACTTAAAATAATGGCGGTTTGTGTAGCGGCATATGAGGCAACTGGCAGCCAAGTTCAATTGTCTCTTGAGAGAGGCCTTCCTGCTATGATTGGCAACTTCATTGCAAGACAGCTTCCATATCCATCATTATCATATGACATGGTTCACTGTGCTCAATGTGGCATCATTTGGGATGAAAAGGATGGAATGTTCCTCATAGAAGTTGACCGTGTTCTTAAACCTGGAGGATATTTTGTTTTAACATCACCTACGAGCAAGCTACAGGGTTCATCGCGGGAGAAAAAAAGTATCACGTTGAACCCAATGGAAGAGCATACCCAGCAACTCTGTTGGACGCTCCTAGCCCAGCAAGATGAGACTTTTATATGGCAGAAGACTGCTGACCTGGACTGTTATGCATCTCGCAAGCAGCGTGCTATTCAACTATGTAAAGATGGGGATGAAACTCAATCATATTATCAGCCACTTGTACCATGTATAAGTGGGACGTCTAGCAAGCGCTGGATTGCAATACAAAACAGGTCCTTTGATTCTGAATTGAGAGTTCAGCCTGAAGAGTTTTATGAAGACATGCATTTCTGGAGATCAGCTGTAGATAATTATTGGTCACTGCTTACGCCACTAATTTTCTCTGACCATCCAAAGAGACCTGGAGATGAAGATCCACTGCCTCCATATAACATGATCCGGAATGTTATGGACATGAGTTCTAATTATGGGGGTTTGAATGCTGCATTGCTGGAGGAGAAAAAATCGGTGTGGGTCATGAATGTTGTTCCTGCCAGGGCTTATAATGCACTTCCTCTCATACTCGATAGAGGTTTTGCTGGTGTTATGCATGACTGGTGTGAACCTTTCCCCACCTACCCACGGACATATGATCTGCTTCATGCAAATGGACTTCTGTCACAATTCATTTCAGAACGCTGCAGCATGATAGACTTATTCTTGGAGATGGACAGGATACTACGACCAGAGGGATGGATCATTTTTTCCGATACAGTGGGAACGATTGAGATGGCTCGCACACTTGCAACTCAAGTACGTTGGGAAGCCAGGATAATTGATCTTCAGAATGGCAGTGACCAGCGGTTACTTGTTTGCCAGAAACTATTTTTGAAAAAATGA
Protein sequence

>Msa0556010

MRSSLWNKLWMIFGPKPKLNWLILSVISILAFITLFGSSSSNAIDSSPRRQASLIYTNYRRIKERVAVDYLELKSVSSGGLKQKELGLCGKERENFVPCHNVTANLLSGFEQGEELDRHCQVSREGDRCLVRPPKEYKIPLRWPRGRDIIWSGNVKITKDQFLSSGSMTKRLMLLEENQIAFHSQDGLIFDGVKDYSRQIAEMIGLGSDTELPQAGVRTMLDINCGFGSFGAHLLSLKIMAVCVAAYEATGSQVQLSLERGLPAMIGNFIARQLPYPSLSYDMVHCAQCGIIWDEKDGMFLIEVDRVLKPGGYFVLTSPTSKLQGSSREKKSITLNPMEEHTQQLCWTLLAQQDETFIWQKTADLDCYASRKQRAIQLCKDGDETQSYYQPLVPCISGTSSKRWIAIQNRSFDSELRVQPEEFYEDMHFWRSAVDNYWSLLTPLIFSDHPKRPGDEDPLPPYNMIRNVMDMSSNYGGLNAALLEEKKSVWVMNVVPARAYNALPLILDRGFAGVMHDWCEPFPTYPRTYDLLHANGLLSQFISERCSMIDLFLEMDRILRPEGWIIFSDTVGTIEMARTLATQVRWEARIIDLQNGSDQRLLVCQKLFLKK*