Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664090 | KEH28582.1 | 96.626 | 326 | 8 | 2 | 1 | 325 | 1 | 324 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664090 | sp|Q94AN4|AP2L1_ARATH | 59.816 | 326 | 125 | 3 | 3 | 324 | 20 | 343 | 2.56e-112 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664090 | A0A072UFX2 | 96.626 | 326 | 8 | 2 | 1 | 325 | 1 | 324 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0664090 | TF | AP2/ERF-AP2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0664090 | 0.834126 | 3.589025e-56 | -8.615850e-47 |
| Msa0035120 | Msa0664090 | 0.831396 | 1.709137e-55 | -8.615850e-47 |
| Msa0036890 | Msa0664090 | 0.804115 | 2.521543e-49 | -8.615850e-47 |
| Msa0048510 | Msa0664090 | 0.810712 | 1.005994e-50 | -8.615850e-47 |
| Msa0075450 | Msa0664090 | 0.835509 | 1.609647e-56 | -8.615850e-47 |
| Msa0077340 | Msa0664090 | 0.807427 | 5.082457e-50 | -8.615850e-47 |
| Msa0077560 | Msa0664090 | 0.829200 | 5.879791e-55 | -8.615850e-47 |
| Msa0081520 | Msa0664090 | 0.823526 | 1.320998e-53 | -8.615850e-47 |
| Msa0083730 | Msa0664090 | 0.816168 | 6.354511e-52 | -8.615850e-47 |
| Msa0083750 | Msa0664090 | 0.800722 | 1.261029e-48 | -8.615850e-47 |
| Msa0083810 | Msa0664090 | 0.818609 | 1.792544e-52 | -8.615850e-47 |
| Msa0084970 | Msa0664090 | 0.804662 | 1.939466e-49 | -8.615850e-47 |
| Msa0089980 | Msa0664090 | 0.828280 | 9.812546e-55 | -8.615850e-47 |
| Msa0090010 | Msa0664090 | 0.828362 | 9.376531e-55 | -8.615850e-47 |
| Msa0093850 | Msa0664090 | 0.823421 | 1.398048e-53 | -8.615850e-47 |
| Msa0094780 | Msa0664090 | 0.847054 | 1.474293e-59 | -8.615850e-47 |
| Msa0106620 | Msa0664090 | 0.830012 | 3.730737e-55 | -8.615850e-47 |
| Msa0106710 | Msa0664090 | 0.809808 | 1.575281e-50 | -8.615850e-47 |
| Msa0611210 | Msa0664090 | 0.803882 | 2.819221e-49 | -8.615850e-47 |
| Msa0614000 | Msa0664090 | 0.825481 | 4.578293e-54 | -8.615850e-47 |
| Msa0624900 | Msa0664090 | 0.858919 | 5.916725e-63 | -8.615850e-47 |
| Msa0624940 | Msa0664090 | 0.802181 | 6.337687e-49 | -8.615850e-47 |
| Msa0626270 | Msa0664090 | 0.849633 | 2.852482e-60 | -8.615850e-47 |
| Msa0626450 | Msa0664090 | 0.847306 | 1.256911e-59 | -8.615850e-47 |
| Msa0626460 | Msa0664090 | 0.846569 | 2.000352e-59 | -8.615850e-47 |
| Msa0626490 | Msa0664090 | 0.845210 | 4.680941e-59 | -8.615850e-47 |
| Msa0630940 | Msa0664090 | 0.825561 | 4.382718e-54 | -8.615850e-47 |
| Msa0638480 | Msa0664090 | 0.847962 | 8.294611e-60 | -8.615850e-47 |
| Msa0652000 | Msa0664090 | 0.820503 | 6.628319e-53 | -8.615850e-47 |
| Msa0652770 | Msa0664090 | 0.816170 | 6.346783e-52 | -8.615850e-47 |
| Msa0658590 | Msa0664090 | 0.801435 | 9.018256e-49 | -8.615850e-47 |
| Msa0658640 | Msa0664090 | 0.827721 | 1.337790e-54 | -8.615850e-47 |
| Msa0663270 | Msa0664090 | 0.896013 | 5.540065e-76 | -8.615850e-47 |
| Msa0664090 | Msa0664150 | 0.915294 | 6.979792e-85 | -8.615850e-47 |
| Msa0664090 | Msa0664540 | 0.858831 | 6.289863e-63 | -8.615850e-47 |
| Msa0664090 | Msa0664600 | 0.850290 | 1.868567e-60 | -8.615850e-47 |
| Msa0664090 | Msa0669180 | 0.823909 | 1.074736e-53 | -8.615850e-47 |
| Msa0664090 | Msa0692880 | 0.825151 | 5.481254e-54 | -8.615850e-47 |
| Msa0664090 | Msa0693330 | 0.807551 | 4.781973e-50 | -8.615850e-47 |
| Msa0664090 | Msa0695270 | 0.810618 | 1.053786e-50 | -8.615850e-47 |
| Msa0664090 | Msa0698100 | 0.817762 | 2.786713e-52 | -8.615850e-47 |
| Msa0664090 | Msa0698910 | 0.815042 | 1.131813e-51 | -8.615850e-47 |
| Msa0664090 | Msa0701360 | 0.803945 | 2.735820e-49 | -8.615850e-47 |
| Msa0664090 | Msa0702720 | 0.817332 | 3.483628e-52 | -8.615850e-47 |
| Msa0664090 | Msa0703600 | 0.813658 | 2.289232e-51 | -8.615850e-47 |
| Msa0664090 | Msa0706760 | 0.805883 | 1.076711e-49 | -8.615850e-47 |
| Msa0664090 | Msa0709200 | 0.813636 | 2.315904e-51 | -8.615850e-47 |
| Msa0664090 | Msa0709440 | 0.807267 | 5.495054e-50 | -8.615850e-47 |
| Msa0664090 | Msa0711400 | 0.811341 | 7.347115e-51 | -8.615850e-47 |
| Msa0664090 | Msa0713680 | 0.822619 | 2.150318e-53 | -8.615850e-47 |
| Msa0664090 | Msa0715060 | 0.806684 | 7.299456e-50 | -8.615850e-47 |
| Msa0664090 | Msa0721020 | 0.825944 | 3.554945e-54 | -8.615850e-47 |
| Msa0664090 | Msa0721080 | 0.837597 | 4.733251e-57 | -8.615850e-47 |
| Msa0664090 | Msa0735780 | 0.823306 | 1.487083e-53 | -8.615850e-47 |
| Msa0664090 | Msa0736870 | 0.800304 | 1.534601e-48 | -8.615850e-47 |
| Msa0664090 | Msa0768990 | 0.805032 | 1.623776e-49 | -8.615850e-47 |
| Msa0664090 | Msa0772710 | 0.801782 | 7.654726e-49 | -8.615850e-47 |
| Msa0664090 | Msa0795870 | 0.854519 | 1.166321e-61 | -8.615850e-47 |
| Msa0664090 | Msa0804250 | 0.817104 | 3.919744e-52 | -8.615850e-47 |
| Msa0664090 | Msa0824450 | 0.808432 | 3.106624e-50 | -8.615850e-47 |
| Msa0664090 | Msa0830460 | 0.803660 | 3.135569e-49 | -8.615850e-47 |
| Msa0664090 | Msa0833530 | 0.814584 | 1.430339e-51 | -8.615850e-47 |
| Msa0664090 | Msa0833650 | 0.852670 | 3.963550e-61 | -8.615850e-47 |
| Msa0664090 | Msa0860620 | 0.805385 | 1.369711e-49 | -8.615850e-47 |
| Msa0664090 | Msa0861510 | 0.805649 | 1.205422e-49 | -8.615850e-47 |
| Msa0664090 | Msa0861600 | 0.808231 | 3.427887e-50 | -8.615850e-47 |
| Msa0664090 | Msa0871720 | 0.822585 | 2.189042e-53 | -8.615850e-47 |
| Msa0664090 | Msa0876930 | 0.823859 | 1.104077e-53 | -8.615850e-47 |
| Msa0664090 | Msa0878280 | 0.825077 | 5.705369e-54 | -8.615850e-47 |
| Msa0664090 | Msa0881090 | 0.848865 | 4.667005e-60 | -8.615850e-47 |
| Msa0664090 | Msa0903070 | 0.816628 | 5.014911e-52 | -8.615850e-47 |
| Msa0664090 | Msa0933760 | 0.805189 | 1.504898e-49 | -8.615850e-47 |
| Msa0664090 | Msa0934140 | 0.818545 | 1.854096e-52 | -8.615850e-47 |
| Msa0664090 | Msa0937020 | 0.812819 | 3.498983e-51 | -8.615850e-47 |
| Msa0664090 | Msa0945190 | 0.818740 | 1.674195e-52 | -8.615850e-47 |
| Msa0664090 | Msa0971650 | 0.808244 | 3.405880e-50 | -8.615850e-47 |
| Msa0664090 | Msa0979180 | 0.842038 | 3.300463e-58 | -8.615850e-47 |
| Msa0664090 | Msa0984690 | 0.801767 | 7.708708e-49 | -8.615850e-47 |
| Msa0664090 | Msa0997920 | 0.800695 | 1.277404e-48 | -8.615850e-47 |
| Msa0664090 | Msa1002350 | 0.808777 | 2.620960e-50 | -8.615850e-47 |
| Msa0664090 | Msa1006810 | 0.808133 | 3.597913e-50 | -8.615850e-47 |
| Msa0664090 | Msa1012800 | 0.808163 | 3.544196e-50 | -8.615850e-47 |
| Msa0664090 | Msa1027990 | 0.812317 | 4.505512e-51 | -8.615850e-47 |
| Msa0664090 | Msa1028280 | 0.829615 | 4.663071e-55 | -8.615850e-47 |
| Msa0664090 | Msa1034500 | 0.801912 | 7.196204e-49 | -8.615850e-47 |
| Msa0664090 | Msa1043330 | 0.800840 | 1.193494e-48 | -8.615850e-47 |
| Msa0664090 | Msa1044470 | 0.928944 | 1.408884e-92 | -8.615850e-47 |
| Msa0664090 | Msa1072940 | 0.841569 | 4.389915e-58 | -8.615850e-47 |
| Msa0664090 | Msa1074220 | 0.805749 | 1.148456e-49 | -8.615850e-47 |
| Msa0664090 | Msa1084530 | 0.801531 | 8.617327e-49 | -8.615850e-47 |
| Msa0664090 | Msa1085330 | 0.817458 | 3.264392e-52 | -8.615850e-47 |
| Msa0664090 | Msa1089450 | 0.818113 | 2.321855e-52 | -8.615850e-47 |
| Msa0664090 | Msa1111380 | 0.814012 | 1.913721e-51 | -8.615850e-47 |
| Msa0664090 | Msa1112380 | 0.804148 | 2.482302e-49 | -8.615850e-47 |
| Msa0664090 | Msa1113340 | 0.814282 | 1.667545e-51 | -8.615850e-47 |
| Msa0664090 | Msa1127590 | 0.807545 | 4.796020e-50 | -8.615850e-47 |
| Msa0664090 | Msa1132840 | 0.852061 | 5.908044e-61 | -8.615850e-47 |
| Msa0664090 | Msa1145580 | 0.817613 | 3.010619e-52 | -8.615850e-47 |
| Msa0664090 | Msa1145810 | 0.833135 | 6.345421e-56 | -8.615850e-47 |
| Msa0664090 | Msa1155170 | -0.816740 | 4.731664e-52 | -8.615850e-47 |
| Msa0664090 | Msa1160920 | 0.856902 | 2.350171e-62 | -8.615850e-47 |
| Msa0664090 | Msa1162770 | 0.805780 | 1.131607e-49 | -8.615850e-47 |
| Msa0664090 | Msa1165090 | 0.809532 | 1.806370e-50 | -8.615850e-47 |
| Msa0664090 | Msa1171290 | 0.809923 | 1.488645e-50 | -8.615850e-47 |
| Msa0664090 | Msa1186020 | 0.825928 | 3.586991e-54 | -8.615850e-47 |
| Msa0664090 | Msa1192570 | 0.833639 | 4.750856e-56 | -8.615850e-47 |
| Msa0664090 | Msa1200890 | 0.828439 | 8.986785e-55 | -8.615850e-47 |
| Msa0664090 | Msa1208430 | 0.801523 | 8.649598e-49 | -8.615850e-47 |
| Msa0664090 | Msa1208950 | 0.845142 | 4.884295e-59 | -8.615850e-47 |
| Msa0664090 | Msa1217210 | 0.845055 | 5.153649e-59 | -8.615850e-47 |
| Msa0664090 | Msa1219000 | 0.825120 | 5.574772e-54 | -8.615850e-47 |
| Msa0664090 | Msa1222350 | 0.843834 | 1.097829e-58 | -8.615850e-47 |
| Msa0664090 | Msa1225860 | -0.829931 | 3.904741e-55 | -8.615850e-47 |
| Msa0664090 | Msa1226520 | 0.817809 | 2.719802e-52 | -8.615850e-47 |
| Msa0664090 | Msa1237740 | 0.804571 | 2.026248e-49 | -8.615850e-47 |
| Msa0664090 | Msa1264710 | 0.806879 | 6.637002e-50 | -8.615850e-47 |
| Msa0664090 | Msa1268240 | 0.800405 | 1.463386e-48 | -8.615850e-47 |
| Msa0664090 | Msa1277150 | 0.812405 | 4.310080e-51 | -8.615850e-47 |
| Msa0664090 | Msa1298370 | 0.802817 | 4.686635e-49 | -8.615850e-47 |
| Msa0664090 | Msa1307630 | 0.824162 | 9.371711e-54 | -8.615850e-47 |
| Msa0664090 | Msa1318170 | 0.819189 | 1.323282e-52 | -8.615850e-47 |
| Msa0664090 | Msa1320670 | 0.839770 | 1.299156e-57 | -8.615850e-47 |
| Msa0664090 | Msa1332760 | 0.803729 | 3.033901e-49 | -8.615850e-47 |
| Msa0664090 | Msa1341840 | 0.833125 | 6.382445e-56 | -8.615850e-47 |
| Msa0664090 | Msa1348090 | 0.825865 | 3.712491e-54 | -8.615850e-47 |
| Msa0664090 | Msa1356830 | 0.805324 | 1.410546e-49 | -8.615850e-47 |
| Msa0664090 | Msa1369150 | 0.800992 | 1.111010e-48 | -8.615850e-47 |
| Msa0664090 | Msa1369690 | 0.801404 | 9.151190e-49 | -8.615850e-47 |
| Msa0664090 | Msa1371520 | 0.803111 | 4.073129e-49 | -8.615850e-47 |
| Msa0664090 | Msa1371910 | 0.818857 | 1.574673e-52 | -8.615850e-47 |
| Msa0664090 | Msa1382710 | 0.801270 | 9.746145e-49 | -8.615850e-47 |
| Msa0664090 | Msa1388600 | 0.807117 | 5.911137e-50 | -8.615850e-47 |
| Msa0664090 | Msa1392580 | 0.836047 | 1.176383e-56 | -8.615850e-47 |
| Msa0664090 | Msa1393820 | 0.818218 | 2.197912e-52 | -8.615850e-47 |
| Msa0664090 | Msa1397400 | 0.832073 | 1.163805e-55 | -8.615850e-47 |
| Msa0664090 | Msa1403710 | 0.812654 | 3.802926e-51 | -8.615850e-47 |
| Msa0664090 | Msa1412000 | 0.821864 | 3.218674e-53 | -8.615850e-47 |
| Msa0664090 | Msa1418240 | 0.835328 | 1.789308e-56 | -8.615850e-47 |
| Msa0664090 | Msa1420950 | 0.833640 | 4.748716e-56 | -8.615850e-47 |
| Msa0664090 | Msa1427110 | 0.833665 | 4.681282e-56 | -8.615850e-47 |
| Msa0664090 | Msa1427200 | 0.831952 | 1.246904e-55 | -8.615850e-47 |
| Msa0664090 | Msa1440880 | 0.811572 | 6.547738e-51 | -8.615850e-47 |
| Msa0664090 | Msa1440960 | 0.841745 | 3.944304e-58 | -8.615850e-47 |
| Msa0664090 | Msa1446810 | 0.800894 | 1.163273e-48 | -8.615850e-47 |
| Msa0664090 | Msa1459460 | 0.804151 | 2.478532e-49 | -8.615850e-47 |
| Msa0664090 | Msa1461370 | 0.819140 | 1.357717e-52 | -8.615850e-47 |
| Msa0664090 | Msa1461540 | 0.821676 | 3.558017e-53 | -8.615850e-47 |
| Msa0130110 | Msa0664090 | 0.800658 | 1.300103e-48 | -8.615850e-47 |
| Msa0133280 | Msa0664090 | 0.814542 | 1.461190e-51 | -8.615850e-47 |
| Msa0138360 | Msa0664090 | 0.802511 | 5.418251e-49 | -8.615850e-47 |
| Msa0141400 | Msa0664090 | 0.814331 | 1.626610e-51 | -8.615850e-47 |
| Msa0144360 | Msa0664090 | 0.800705 | 1.271368e-48 | -8.615850e-47 |
| Msa0173890 | Msa0664090 | 0.814696 | 1.351128e-51 | -8.615850e-47 |
| Msa0174450 | Msa0664090 | 0.833889 | 4.115104e-56 | -8.615850e-47 |
| Msa0175930 | Msa0664090 | 0.832763 | 7.850329e-56 | -8.615850e-47 |
| Msa0176150 | Msa0664090 | 0.823480 | 1.354301e-53 | -8.615850e-47 |
| Msa0176170 | Msa0664090 | 0.821707 | 3.499542e-53 | -8.615850e-47 |
| Msa0176180 | Msa0664090 | 0.808695 | 2.729731e-50 | -8.615850e-47 |
| Msa0182190 | Msa0664090 | 0.805038 | 1.618698e-49 | -8.615850e-47 |
| Msa0189900 | Msa0664090 | 0.811564 | 6.574495e-51 | -8.615850e-47 |
| Msa0221000 | Msa0664090 | 0.831010 | 2.126363e-55 | -8.615850e-47 |
| Msa0223210 | Msa0664090 | 0.817929 | 2.555223e-52 | -8.615850e-47 |
| Msa0225480 | Msa0664090 | 0.842956 | 1.883682e-58 | -8.615850e-47 |
| Msa0225680 | Msa0664090 | 0.807810 | 4.213923e-50 | -8.615850e-47 |
| Msa0225860 | Msa0664090 | 0.862627 | 4.430970e-64 | -8.615850e-47 |
| Msa0237210 | Msa0664090 | 0.814402 | 1.568834e-51 | -8.615850e-47 |
| Msa0369790 | Msa0664090 | 0.831309 | 1.796036e-55 | -8.615850e-47 |
| Msa0375640 | Msa0664090 | 0.815436 | 9.253723e-52 | -8.615850e-47 |
| Msa0378720 | Msa0664090 | 0.829298 | 5.566916e-55 | -8.615850e-47 |
| Msa0424160 | Msa0664090 | 0.831294 | 1.811006e-55 | -8.615850e-47 |
| Msa0427700 | Msa0664090 | 0.815487 | 9.016976e-52 | -8.615850e-47 |
| Msa0428370 | Msa0664090 | 0.840526 | 8.245734e-58 | -8.615850e-47 |
| Msa0430300 | Msa0664090 | 0.800701 | 1.273651e-48 | -8.615850e-47 |
| Msa0435420 | Msa0664090 | 0.818670 | 1.736386e-52 | -8.615850e-47 |
| Msa0435570 | Msa0664090 | 0.817850 | 2.661868e-52 | -8.615850e-47 |
| Msa0450400 | Msa0664090 | -0.814442 | 1.537728e-51 | -8.615850e-47 |
| Msa0464000 | Msa0664090 | 0.830301 | 3.172682e-55 | -8.615850e-47 |
| Msa0474730 | Msa0664090 | 0.841679 | 4.106230e-58 | -8.615850e-47 |
| Msa0481890 | Msa0664090 | 0.804384 | 2.216501e-49 | -8.615850e-47 |
| Msa0240900 | Msa0664090 | 0.810422 | 1.161874e-50 | -8.615850e-47 |
| Msa0242590 | Msa0664090 | 0.800996 | 1.108844e-48 | -8.615850e-47 |
| Msa0260510 | Msa0664090 | 0.842685 | 2.224078e-58 | -8.615850e-47 |
| Msa0261170 | Msa0664090 | 0.808439 | 3.094956e-50 | -8.615850e-47 |
| Msa0267110 | Msa0664090 | 0.805709 | 1.171167e-49 | -8.615850e-47 |
| Msa0269210 | Msa0664090 | 0.804986 | 1.660017e-49 | -8.615850e-47 |
| Msa0274980 | Msa0664090 | 0.807898 | 4.035857e-50 | -8.615850e-47 |
| Msa0279850 | Msa0664090 | 0.834346 | 3.160633e-56 | -8.615850e-47 |
| Msa0298470 | Msa0664090 | 0.831427 | 1.679418e-55 | -8.615850e-47 |
| Msa0300270 | Msa0664090 | 0.812998 | 3.196349e-51 | -8.615850e-47 |
| Msa0300320 | Msa0664090 | 0.833383 | 5.504104e-56 | -8.615850e-47 |
| Msa0302290 | Msa0664090 | 0.802503 | 5.439606e-49 | -8.615850e-47 |
| Msa0304570 | Msa0664090 | 0.807046 | 6.121153e-50 | -8.615850e-47 |
| Msa0304680 | Msa0664090 | 0.801549 | 8.544879e-49 | -8.615850e-47 |
| Msa0307270 | Msa0664090 | 0.858441 | 8.220256e-63 | -8.615850e-47 |
| Msa0315690 | Msa0664090 | 0.811962 | 5.385559e-51 | -8.615850e-47 |
| Msa0317970 | Msa0664090 | 0.814550 | 1.455059e-51 | -8.615850e-47 |
| Msa0322900 | Msa0664090 | 0.841641 | 4.200013e-58 | -8.615850e-47 |
| Msa0328730 | Msa0664090 | 0.807966 | 3.903119e-50 | -8.615850e-47 |
| Msa0330380 | Msa0664090 | 0.800413 | 1.458279e-48 | -8.615850e-47 |
| Msa0337700 | Msa0664090 | 0.830920 | 2.237708e-55 | -8.615850e-47 |
| Msa0339650 | Msa0664090 | 0.831258 | 1.848506e-55 | -8.615850e-47 |
| Msa0340500 | Msa0664090 | 0.841567 | 4.393835e-58 | -8.615850e-47 |
| Msa0341690 | Msa0664090 | 0.827834 | 1.256966e-54 | -8.615850e-47 |
| Msa0361910 | Msa0664090 | 0.838774 | 2.354991e-57 | -8.615850e-47 |
| Msa0483100 | Msa0664090 | 0.839850 | 1.237882e-57 | -8.615850e-47 |
| Msa0484380 | Msa0664090 | 0.801738 | 7.813859e-49 | -8.615850e-47 |
| Msa0485240 | Msa0664090 | 0.829984 | 3.789669e-55 | -8.615850e-47 |
| Msa0509550 | Msa0664090 | 0.833437 | 5.336034e-56 | -8.615850e-47 |
| Msa0515800 | Msa0664090 | 0.818970 | 1.484654e-52 | -8.615850e-47 |
| Msa0518030 | Msa0664090 | 0.823222 | 1.556179e-53 | -8.615850e-47 |
| Msa0519760 | Msa0664090 | 0.828754 | 7.539300e-55 | -8.615850e-47 |
| Msa0519810 | Msa0664090 | 0.818267 | 2.142662e-52 | -8.615850e-47 |
| Msa0519840 | Msa0664090 | 0.828198 | 1.027220e-54 | -8.615850e-47 |
| Msa0526730 | Msa0664090 | 0.817304 | 3.534665e-52 | -8.615850e-47 |
| Msa0527190 | Msa0664090 | 0.808361 | 3.216886e-50 | -8.615850e-47 |
| Msa0527820 | Msa0664090 | 0.965824 | 4.156865e-125 | -8.615850e-47 |
| Msa0528570 | Msa0664090 | 0.806285 | 8.860420e-50 | -8.615850e-47 |
| Msa0534400 | Msa0664090 | 0.817443 | 3.289864e-52 | -8.615850e-47 |
| Msa0534720 | Msa0664090 | 0.819381 | 1.196866e-52 | -8.615850e-47 |
| Msa0549360 | Msa0664090 | 0.800924 | 1.146931e-48 | -8.615850e-47 |
| Msa0556010 | Msa0664090 | 0.812110 | 4.998878e-51 | -8.615850e-47 |
| Msa0565090 | Msa0664090 | 0.808663 | 2.772371e-50 | -8.615850e-47 |
| Msa0567170 | Msa0664090 | 0.813140 | 2.975696e-51 | -8.615850e-47 |
| Msa0572750 | Msa0664090 | 0.809070 | 2.269098e-50 | -8.615850e-47 |
| Msa0573850 | Msa0664090 | 0.814108 | 1.822577e-51 | -8.615850e-47 |
| Msa0580370 | Msa0664090 | 0.849207 | 3.751001e-60 | -8.615850e-47 |
| Msa0582480 | Msa0664090 | 0.960073 | 3.793967e-118 | -8.615850e-47 |
| Msa0583360 | Msa0664090 | -0.827740 | 1.324013e-54 | -8.615850e-47 |
| Msa0586220 | Msa0664090 | 0.975741 | 1.636440e-140 | -8.615850e-47 |
| Msa0590640 | Msa0664090 | 0.824173 | 9.318931e-54 | -8.615850e-47 |
| Msa0597770 | Msa0664090 | 0.813165 | 2.937841e-51 | -8.615850e-47 |
| Msa0597790 | Msa0664090 | 0.809252 | 2.074633e-50 | -8.615850e-47 |
| Msa0601950 | Msa0664090 | 0.801971 | 6.998191e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664090 | MtrunA17_Chr4g0002011 | 95.745 | 329 | 8 | 3 | 1 | 325 | 1 | 327 | 0.0 | 641 |
| Msa0664090 | MtrunA17_Chr4g0073521 | 59.280 | 361 | 100 | 7 | 1 | 324 | 1 | 351 | 5.38e-138 | 395 |
| Msa0664090 | MtrunA17_Chr8g0355191 | 56.538 | 260 | 86 | 3 | 26 | 285 | 43 | 275 | 8.54e-98 | 295 |
| Msa0664090 | MtrunA17_Chr7g0216601 | 67.476 | 206 | 59 | 3 | 22 | 221 | 46 | 249 | 4.24e-95 | 287 |
| Msa0664090 | MtrunA17_Chr8g0355181 | 75.706 | 177 | 43 | 0 | 33 | 209 | 51 | 227 | 1.17e-91 | 278 |
| Msa0664090 | MtrunA17_Chr6g0452911 | 72.571 | 175 | 38 | 1 | 42 | 206 | 65 | 239 | 1.44e-90 | 275 |
| Msa0664090 | MtrunA17_Chr8g0362541 | 71.809 | 188 | 39 | 1 | 37 | 210 | 68 | 255 | 9.76e-87 | 266 |
| Msa0664090 | MtrunA17_Chr4g0072291 | 71.006 | 169 | 46 | 1 | 37 | 202 | 158 | 326 | 2.15e-85 | 266 |
| Msa0664090 | MtrunA17_Chr2g0328971 | 69.880 | 166 | 50 | 0 | 37 | 202 | 166 | 331 | 2.56e-83 | 261 |
| Msa0664090 | MtrunA17_Chr1g0152161 | 70.482 | 166 | 49 | 0 | 37 | 202 | 311 | 476 | 4.23e-82 | 261 |
| Msa0664090 | MtrunA17_Chr4g0032631 | 61.224 | 196 | 70 | 2 | 13 | 202 | 135 | 330 | 8.67e-82 | 258 |
| Msa0664090 | MtrunA17_Chr8g0343851 | 66.480 | 179 | 57 | 1 | 27 | 202 | 234 | 412 | 1.13e-81 | 258 |
| Msa0664090 | MtrunA17_Chr7g0249621 | 67.222 | 180 | 53 | 2 | 29 | 202 | 247 | 426 | 2.68e-81 | 260 |
| Msa0664090 | MtrunA17_Chr3g0135161 | 67.614 | 176 | 55 | 1 | 27 | 202 | 301 | 474 | 1.71e-80 | 257 |
| Msa0664090 | MtrunA17_Chr5g0400871 | 60.804 | 199 | 70 | 2 | 12 | 202 | 218 | 416 | 1.33e-79 | 252 |
| Msa0664090 | MtrunA17_Chr4g0054351 | 67.039 | 179 | 54 | 2 | 27 | 202 | 301 | 477 | 9.73e-79 | 253 |
| Msa0664090 | MtrunA17_Chr5g0412151 | 69.822 | 169 | 48 | 1 | 37 | 202 | 223 | 391 | 2.08e-70 | 227 |
| Msa0664090 | MtrunA17_Chr2g0305821 | 70.064 | 157 | 38 | 1 | 1 | 148 | 1 | 157 | 2.08e-66 | 206 |
| Msa0664090 | MtrunA17_Chr8g0367311 | 67.188 | 128 | 42 | 0 | 75 | 202 | 22 | 149 | 2.45e-56 | 183 |
| Msa0664090 | MtrunA17_Chr2g0305831 | 46.890 | 209 | 69 | 7 | 144 | 319 | 1 | 200 | 9.40e-49 | 162 |
| Msa0664090 | MtrunA17_Chr7g0257361 | 59.060 | 149 | 53 | 2 | 21 | 166 | 40 | 183 | 2.14e-46 | 162 |
| Msa0664090 | MtrunA17_Chr7g0263581 | 48.058 | 206 | 85 | 6 | 42 | 247 | 140 | 323 | 1.34e-42 | 153 |
| Msa0664090 | MtrunA17_Chr4g0053181 | 47.805 | 205 | 87 | 5 | 42 | 245 | 177 | 362 | 1.97e-41 | 150 |
| Msa0664090 | MtrunA17_Chr5g0401891 | 48.947 | 190 | 79 | 5 | 42 | 231 | 153 | 324 | 2.94e-40 | 147 |
| Msa0664090 | MtrunA17_Chr4g0030191 | 45.813 | 203 | 89 | 5 | 42 | 244 | 132 | 313 | 5.09e-39 | 143 |
| Msa0664090 | MtrunA17_Chr2g0325911 | 43.284 | 201 | 78 | 6 | 42 | 242 | 135 | 299 | 2.87e-31 | 122 |
| Msa0664090 | MtrunA17_Chr3g0126151 | 48.387 | 93 | 47 | 1 | 86 | 178 | 47 | 138 | 6.16e-23 | 92.8 |
| Msa0664090 | MtrunA17_Chr1g0170761 | 39.375 | 160 | 87 | 5 | 32 | 190 | 128 | 278 | 1.11e-15 | 77.0 |
| Msa0664090 | MtrunA17_Chr8g0367321 | 63.830 | 47 | 17 | 0 | 28 | 74 | 145 | 191 | 3.90e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664090 | AT1G16060.1 | 59.816 | 326 | 125 | 3 | 3 | 324 | 20 | 343 | 2.61e-113 | 332 |
| Msa0664090 | AT1G79700.2 | 63.934 | 305 | 77 | 8 | 24 | 324 | 35 | 310 | 2.47e-107 | 316 |
| Msa0664090 | AT1G79700.1 | 60.656 | 305 | 77 | 9 | 24 | 324 | 35 | 300 | 7.60e-96 | 286 |
| Msa0664090 | AT3G54320.3 | 72.222 | 198 | 43 | 3 | 24 | 209 | 39 | 236 | 5.66e-87 | 268 |
| Msa0664090 | AT3G54320.1 | 72.222 | 198 | 43 | 3 | 24 | 209 | 39 | 236 | 6.52e-87 | 268 |
| Msa0664090 | AT5G57390.2 | 65.957 | 188 | 50 | 2 | 37 | 210 | 81 | 268 | 6.02e-85 | 263 |
| Msa0664090 | AT5G57390.1 | 65.957 | 188 | 50 | 2 | 37 | 210 | 199 | 386 | 5.19e-84 | 264 |
| Msa0664090 | AT1G72570.1 | 65.385 | 182 | 57 | 2 | 27 | 202 | 206 | 387 | 1.65e-81 | 253 |
| Msa0664090 | AT1G51190.1 | 58.824 | 204 | 81 | 1 | 2 | 202 | 151 | 354 | 2.34e-81 | 257 |
| Msa0664090 | AT5G17430.2 | 69.231 | 169 | 49 | 1 | 37 | 202 | 144 | 312 | 5.74e-80 | 253 |
| Msa0664090 | AT5G17430.1 | 69.231 | 169 | 49 | 1 | 37 | 202 | 206 | 374 | 1.06e-79 | 253 |
| Msa0664090 | AT3G20840.1 | 59.694 | 196 | 73 | 2 | 13 | 202 | 150 | 345 | 2.68e-79 | 252 |
| Msa0664090 | AT4G37750.1 | 67.039 | 179 | 54 | 2 | 27 | 202 | 271 | 447 | 6.52e-78 | 248 |
| Msa0664090 | AT1G16060.3 | 59.109 | 247 | 98 | 2 | 75 | 320 | 25 | 269 | 4.14e-76 | 235 |
| Msa0664090 | AT1G79700.3 | 60.558 | 251 | 69 | 7 | 75 | 324 | 13 | 234 | 1.05e-73 | 227 |
| Msa0664090 | AT1G79700.4 | 60.558 | 251 | 69 | 7 | 75 | 324 | 7 | 228 | 1.24e-73 | 227 |
| Msa0664090 | AT5G65510.4 | 69.231 | 169 | 49 | 1 | 37 | 202 | 169 | 337 | 1.44e-71 | 228 |
| Msa0664090 | AT5G65510.2 | 69.231 | 169 | 49 | 1 | 37 | 202 | 227 | 395 | 3.03e-71 | 229 |
| Msa0664090 | AT5G65510.1 | 69.231 | 169 | 49 | 1 | 37 | 202 | 227 | 395 | 3.03e-71 | 229 |
| Msa0664090 | AT5G10510.2 | 68.675 | 166 | 52 | 0 | 37 | 202 | 226 | 391 | 3.34e-71 | 230 |
| Msa0664090 | AT5G10510.7 | 67.456 | 169 | 52 | 1 | 37 | 202 | 226 | 394 | 3.62e-69 | 225 |
| Msa0664090 | AT5G10510.5 | 67.456 | 169 | 52 | 1 | 37 | 202 | 226 | 394 | 3.62e-69 | 225 |
| Msa0664090 | AT5G10510.1 | 67.456 | 169 | 52 | 1 | 37 | 202 | 249 | 417 | 6.80e-69 | 225 |
| Msa0664090 | AT5G10510.6 | 67.456 | 169 | 52 | 1 | 37 | 202 | 264 | 432 | 7.76e-69 | 225 |
| Msa0664090 | AT5G10510.4 | 67.456 | 169 | 52 | 1 | 37 | 202 | 264 | 432 | 7.76e-69 | 225 |
| Msa0664090 | AT5G10510.3 | 59.788 | 189 | 53 | 1 | 37 | 202 | 264 | 452 | 1.58e-64 | 214 |
| Msa0664090 | AT5G65510.3 | 68.345 | 139 | 41 | 1 | 37 | 172 | 169 | 307 | 1.00e-63 | 204 |
| Msa0664090 | AT3G54320.4 | 79.259 | 135 | 28 | 0 | 75 | 209 | 36 | 170 | 3.40e-63 | 204 |
| Msa0664090 | AT3G54320.5 | 79.259 | 135 | 28 | 0 | 75 | 209 | 36 | 170 | 3.40e-63 | 204 |
| Msa0664090 | AT1G16060.2 | 55.450 | 211 | 91 | 2 | 115 | 324 | 1 | 209 | 2.17e-61 | 195 |
| Msa0664090 | AT1G16060.4 | 55.450 | 211 | 91 | 2 | 115 | 324 | 1 | 209 | 2.17e-61 | 195 |
| Msa0664090 | AT1G16060.6 | 55.450 | 211 | 91 | 2 | 115 | 324 | 1 | 209 | 2.17e-61 | 195 |
| Msa0664090 | AT1G16060.5 | 55.450 | 211 | 91 | 2 | 115 | 324 | 1 | 209 | 2.17e-61 | 195 |
| Msa0664090 | AT2G41710.1 | 50.000 | 188 | 82 | 3 | 21 | 205 | 50 | 228 | 2.57e-46 | 162 |
| Msa0664090 | AT2G41710.4 | 50.000 | 188 | 82 | 3 | 21 | 205 | 50 | 228 | 3.32e-46 | 162 |
| Msa0664090 | AT2G41710.2 | 48.705 | 193 | 82 | 4 | 21 | 205 | 50 | 233 | 7.31e-44 | 155 |
| Msa0664090 | AT3G54320.2 | 83.158 | 95 | 16 | 0 | 115 | 209 | 1 | 95 | 5.41e-43 | 150 |
| Msa0664090 | AT2G28550.3 | 42.083 | 240 | 115 | 5 | 42 | 279 | 154 | 371 | 7.75e-43 | 154 |
| Msa0664090 | AT4G36920.1 | 46.465 | 198 | 89 | 4 | 42 | 239 | 132 | 312 | 4.65e-40 | 145 |
| Msa0664090 | AT4G36920.2 | 46.465 | 198 | 89 | 4 | 42 | 239 | 132 | 312 | 4.65e-40 | 145 |
| Msa0664090 | AT2G41710.3 | 42.152 | 223 | 82 | 4 | 21 | 205 | 50 | 263 | 2.26e-39 | 144 |
| Msa0664090 | AT1G16060.7 | 47.849 | 186 | 94 | 2 | 140 | 324 | 4 | 187 | 2.52e-39 | 137 |
| Msa0664090 | AT5G67180.2 | 47.568 | 185 | 80 | 4 | 27 | 202 | 73 | 249 | 2.02e-38 | 138 |
| Msa0664090 | AT5G67180.3 | 47.568 | 185 | 80 | 4 | 27 | 202 | 73 | 249 | 2.44e-38 | 137 |
| Msa0664090 | AT5G67180.1 | 50.932 | 161 | 71 | 3 | 42 | 202 | 97 | 249 | 5.76e-38 | 138 |
| Msa0664090 | AT2G28550.1 | 39.167 | 240 | 107 | 6 | 42 | 279 | 154 | 356 | 1.46e-33 | 128 |
| Msa0664090 | AT2G28550.4 | 51.095 | 137 | 59 | 3 | 42 | 178 | 154 | 282 | 1.48e-31 | 121 |
| Msa0664090 | AT5G67180.4 | 45.625 | 160 | 70 | 4 | 31 | 181 | 77 | 228 | 3.31e-29 | 112 |
| Msa0664090 | AT2G28550.5 | 38.164 | 207 | 96 | 4 | 75 | 279 | 14 | 190 | 3.41e-26 | 105 |
| Msa0664090 | AT2G28550.2 | 51.220 | 123 | 52 | 3 | 42 | 164 | 154 | 268 | 1.09e-25 | 103 |
| Msa0664090 | AT2G28550.6 | 51.220 | 123 | 52 | 3 | 42 | 164 | 154 | 268 | 1.09e-25 | 103 |
| Msa0664090 | AT5G60120.6 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.37e-21 | 95.5 |
| Msa0664090 | AT5G60120.1 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.41e-21 | 95.5 |
| Msa0664090 | AT5G60120.4 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.58e-21 | 94.7 |
| Msa0664090 | AT5G60120.3 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.58e-21 | 94.7 |
| Msa0664090 | AT5G60120.5 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.58e-21 | 94.7 |
| Msa0664090 | AT5G60120.2 | 40.854 | 164 | 74 | 4 | 32 | 195 | 151 | 291 | 1.87e-21 | 95.1 |
| Msa0664090 | AT2G39250.2 | 44.554 | 101 | 49 | 2 | 42 | 142 | 109 | 202 | 1.94e-20 | 89.0 |
| Msa0664090 | AT2G39250.1 | 44.554 | 101 | 49 | 2 | 42 | 142 | 109 | 202 | 4.74e-20 | 89.4 |
| Msa0664090 | AT3G54990.2 | 46.154 | 104 | 49 | 2 | 42 | 145 | 123 | 219 | 7.22e-16 | 76.3 |
| Msa0664090 | AT3G54990.1 | 46.154 | 104 | 49 | 2 | 42 | 145 | 123 | 219 | 2.42e-15 | 76.3 |
Find 83 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATGTCTTCGAATTT+TGG | 0.115041 | 4_4:-3061501 | None:intergenic |
| CTTTGTGGAGGTGAGTTTCT+TGG | 0.219994 | 4_4:-3055271 | None:intergenic |
| TATTTATACCTTGGAACTTA+TGG | 0.227175 | 4_4:+3058544 | Msa0664090:CDS |
| CACAAAGAAGCTCAGTTTAT+AGG | 0.267290 | 4_4:+3055287 | Msa0664090:CDS |
| TCGTCGTTGTCTTGTGGTTT+AGG | 0.271322 | 4_4:-3061369 | None:intergenic |
| GGGCTTGATGCTTGATTAGA+AGG | 0.288151 | 4_4:+3061711 | Msa0664090:exon |
| AATGATGATGACAACATATT+TGG | 0.301779 | 4_4:+3061651 | Msa0664090:CDS |
| TTGATTAGAAGGAGAAATTA+TGG | 0.304800 | 4_4:+3061722 | Msa0664090:exon |
| TGAGTAAAAGCTTCCATTCA+TGG | 0.305096 | 4_4:+3055162 | Msa0664090:exon |
| AAAATTGTTTGAATATCTTC+TGG | 0.307325 | 4_4:-3061597 | None:intergenic |
| ACAAAGAAGCTCAGTTTATA+GGG | 0.307352 | 4_4:+3055288 | Msa0664090:CDS |
| TTAATAACTAAACCTTCTTA+AGG | 0.317560 | 4_4:-3056278 | None:intergenic |
| TGAGTTGAAAATAAAGTATA+TGG | 0.366672 | 4_4:-3061777 | None:intergenic |
| GCTCTTACGTGTCATCTTGT+TGG | 0.374034 | 4_4:-3061954 | None:intergenic |
| GCTCGAATTGGCAGGGTCTT+CGG | 0.404820 | 4_4:+3058514 | Msa0664090:CDS |
| ATTTGTGGGATAAGAATTGC+TGG | 0.413847 | 4_4:+3055441 | Msa0664090:CDS |
| GAGTAAACAATTTAGAGAAT+GGG | 0.413873 | 4_4:+3061855 | Msa0664090:three_prime_UTR |
| GGCAACAAATATTTATACCT+TGG | 0.417814 | 4_4:+3058535 | Msa0664090:CDS |
| AGAGTAAACAATTTAGAGAA+TGG | 0.423558 | 4_4:+3061854 | Msa0664090:three_prime_UTR |
| ACTTGGCAGCATTGAAGTAC+TGG | 0.425678 | 4_4:+3055990 | Msa0664090:CDS |
| CTTCAATGCTGCCAAGTCAT+AGG | 0.425738 | 4_4:-3055984 | None:intergenic |
| CTATAAACTGAGCTTCTTTG+TGG | 0.430666 | 4_4:-3055286 | None:intergenic |
| TGAGATTTCTTAGCCATGAA+TGG | 0.431590 | 4_4:-3055175 | None:intergenic |
| AATATATTGGATCCTTAAGA+AGG | 0.444800 | 4_4:+3056266 | Msa0664090:CDS |
| GATGGGAAGCTCGAATTGGC+AGG | 0.455003 | 4_4:+3058506 | Msa0664090:CDS |
| CAGTCAAAAGAAGAATATAT+TGG | 0.457176 | 4_4:+3056253 | Msa0664090:CDS |
| GTCGATATGAAGCTCATTTG+TGG | 0.458701 | 4_4:+3055426 | Msa0664090:CDS |
| CGTGGAATGGTTGATTTGAC+AGG | 0.483312 | 4_4:-3061564 | None:intergenic |
| AATGAATCACAAAGCAAGAA+AGG | 0.484111 | 4_4:+3055464 | Msa0664090:CDS |
| TTTCACCGCGGTGGTGGAAG+AGG | 0.486245 | 4_4:-3055230 | None:intergenic |
| ATTATCAAGAGGAGCTCAAA+GGG | 0.490116 | 4_4:+3056221 | Msa0664090:CDS |
| TCGATATGAAGCTCATTTGT+GGG | 0.492355 | 4_4:+3055427 | Msa0664090:CDS |
| GGAAGATGGGAAGCTCGAAT+TGG | 0.493895 | 4_4:+3058502 | Msa0664090:CDS |
| GACACCACCACAATGGAAGA+TGG | 0.496318 | 4_4:+3058488 | Msa0664090:intron |
| CTTGGCAGCATTGAAGTACT+GGG | 0.500070 | 4_4:+3055991 | Msa0664090:CDS |
| TGCTAGCAATAATCAAGAGC+TGG | 0.512163 | 4_4:+3061413 | Msa0664090:CDS |
| CTGGATCTTAATCAAGAACT+TGG | 0.515101 | 4_4:+3061432 | Msa0664090:CDS |
| TGCAGCACGTGCCTATGACT+TGG | 0.516501 | 4_4:+3055973 | Msa0664090:CDS |
| TTTACGTTTCACCGCGGTGG+TGG | 0.525503 | 4_4:-3055236 | None:intergenic |
| TCACAGTTGTAAGAAATGAT+TGG | 0.525560 | 4_4:-3061930 | None:intergenic |
| ATGGCAGCAATAGAGTATAG+AGG | 0.527216 | 4_4:+3061294 | Msa0664090:CDS |
| GAAAATTGAGAATTGTGTCT+TGG | 0.528761 | 4_4:-3056015 | None:intergenic |
| GTTAGAAAATTCATCGTCAT+CGG | 0.529129 | 4_4:+3061518 | Msa0664090:CDS |
| TTACTATCGTCGTTGTCTTG+TGG | 0.533843 | 4_4:-3061375 | None:intergenic |
| AGTAAACAATTTAGAGAATG+GGG | 0.534967 | 4_4:+3061856 | Msa0664090:three_prime_UTR |
| AATATTGTTATAGACATCGT+TGG | 0.541172 | 4_4:+3055399 | Msa0664090:intron |
| ATAAGATCAGTCGAAGATGC+TGG | 0.558029 | 4_4:-3061468 | None:intergenic |
| TGGAAATGTCCGACGTGGAA+TGG | 0.559065 | 4_4:-3061577 | None:intergenic |
| ATGGTTGATTTGACAGGCGG+TGG | 0.564133 | 4_4:-3061558 | None:intergenic |
| GATCTTAATCAAGAACTTGG+TGG | 0.566882 | 4_4:+3061435 | Msa0664090:CDS |
| TGTTATAGACATCGTTGGAC+CGG | 0.567027 | 4_4:+3055404 | Msa0664090:intron |
| CAAATGAGCTTCATATCGAC+CGG | 0.573235 | 4_4:-3055423 | None:intergenic |
| TCAAGAGGAGCTCAAAGGGA+TGG | 0.574531 | 4_4:+3056225 | Msa0664090:CDS |
| GAGGAGCTCAAAGGGATGGA+AGG | 0.577439 | 4_4:+3056229 | Msa0664090:CDS |
| CTTCCCATCTTCCATTGTGG+TGG | 0.578979 | 4_4:-3058492 | None:intergenic |
| ACACCACCACAATGGAAGAT+GGG | 0.584570 | 4_4:+3058489 | Msa0664090:CDS |
| AATTATCAAGAGGAGCTCAA+AGG | 0.585976 | 4_4:+3056220 | Msa0664090:CDS |
| TGCTGCCATGTCATAAGCTG+TGG | 0.586967 | 4_4:-3061280 | None:intergenic |
| TTAGGTATCAAATTATCAAG+AGG | 0.587787 | 4_4:+3056210 | Msa0664090:intron |
| GAGCTTCCCATCTTCCATTG+TGG | 0.592861 | 4_4:-3058495 | None:intergenic |
| CAGTTTATAGGGGTGTCACA+AGG | 0.604860 | 4_4:+3055299 | Msa0664090:CDS |
| ACGTTTACGTTTCACCGCGG+TGG | 0.605690 | 4_4:-3055239 | None:intergenic |
| TGGAAGTACCATAAGTTCCA+AGG | 0.606508 | 4_4:-3058552 | None:intergenic |
| TGGCAGCAATAGAGTATAGA+GGG | 0.606682 | 4_4:+3061295 | Msa0664090:CDS |
| CAAAGCAAGAAAGGAAGACA+AGG | 0.607141 | 4_4:+3055473 | Msa0664090:CDS |
| CTTAATCAAGAACTTGGTGG+TGG | 0.608278 | 4_4:+3061438 | Msa0664090:CDS |
| TAAACTGAGCTTCTTTGTGG+AGG | 0.608474 | 4_4:-3055283 | None:intergenic |
| ATCAGTCGAAGATGCTGGTG+TGG | 0.611842 | 4_4:-3061463 | None:intergenic |
| TCATTTAATAATAGATGACA+AGG | 0.613911 | 4_4:+3061800 | Msa0664090:three_prime_UTR |
| ACTAAGATCAAAGTTTGTAA+CGG | 0.614633 | 4_4:-3061325 | None:intergenic |
| CAAAATACAGAGGTGTAGCA+AGG | 0.618939 | 4_4:+3056550 | Msa0664090:CDS |
| CAAAGAAGCTCAGTTTATAG+GGG | 0.637455 | 4_4:+3055289 | Msa0664090:CDS |
| TTCTTCCTCTTCCACCACCG+CGG | 0.640893 | 4_4:+3055225 | Msa0664090:CDS |
| ATGGGAAGCTCGAATTGGCA+GGG | 0.643491 | 4_4:+3058507 | Msa0664090:CDS |
| AGCAGCCACAGCTTATGACA+TGG | 0.655956 | 4_4:+3061275 | Msa0664090:CDS |
| ATGTTTAGACACCACCACAA+TGG | 0.660446 | 4_4:+3058481 | Msa0664090:intron |
| GGAATGGTTGATTTGACAGG+CGG | 0.690559 | 4_4:-3061561 | None:intergenic |
| TCTTCTGGAAATGTCCGACG+TGG | 0.691543 | 4_4:-3061582 | None:intergenic |
| AGAGGAGTCTCAAAATACAG+AGG | 0.710309 | 4_4:+3056540 | Msa0664090:CDS |
| TTGGCAGCATTGAAGTACTG+GGG | 0.726529 | 4_4:+3055992 | Msa0664090:CDS |
| CATTTAATAATAGATGACAA+GGG | 0.729629 | 4_4:+3061801 | Msa0664090:three_prime_UTR |
| TCAAATCAACCATTCCACGT+CGG | 0.751359 | 4_4:+3061568 | Msa0664090:CDS |
| TTTACGTTTACGTTTCACCG+CGG | 0.779773 | 4_4:-3055242 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAATATTAAAATACTAT+AGG | + | chr4_4:3057701-3057720 | Msa0664090:intron | 10.0% |
| !! | AACTAAATAGTAAAAAATAA+AGG | + | chr4_4:3057980-3057999 | Msa0664090:intron | 10.0% |
| !! | ACTAAATAGTAAAAAATAAA+GGG | + | chr4_4:3057981-3058000 | Msa0664090:intron | 10.0% |
| !!! | TTTAACATATTATGTTTTTA+GGG | + | chr4_4:3058147-3058166 | Msa0664090:intron | 10.0% |
| !!! | TTTTTTTATGACAAAAAAAT+GGG | + | chr4_4:3058348-3058367 | Msa0664090:intron | 10.0% |
| !! | TTAATTAGATGAATTTAATA+CGG | - | chr4_4:3058743-3058762 | None:intergenic | 10.0% |
| !!! | AATATTTTATTAGAGTTTTT+TGG | - | chr4_4:3059057-3059076 | None:intergenic | 10.0% |
| !! | AACTAAAAGTAATATATATT+TGG | + | chr4_4:3059182-3059201 | Msa0664090:intron | 10.0% |
| !! | AATTAATTTACTTACTAATT+AGG | + | chr4_4:3060368-3060387 | Msa0664090:intron | 10.0% |
| !!! | AAAAAATGAATTTGTTAATT+TGG | + | chr4_4:3061895-3061914 | Msa0664090:three_prime_UTR | 10.0% |
| !!! | AAAAATGAATTTGTTAATTT+GGG | + | chr4_4:3061896-3061915 | Msa0664090:three_prime_UTR | 10.0% |
| !!! | TTGATTTTAAGAATTTTTTA+GGG | + | chr4_4:3061977-3061996 | Msa0664090:three_prime_UTR | 10.0% |
| !!! | TGTTTTAAAAATTGTTGATT+TGG | + | chr4_4:3055704-3055723 | Msa0664090:intron | 15.0% |
| !! | AAAAAAATGAAGATATATGA+AGG | - | chr4_4:3056057-3056076 | None:intergenic | 15.0% |
| !!! | TTCATATATCTTCATTTTTT+TGG | + | chr4_4:3056056-3056075 | Msa0664090:intron | 15.0% |
| !! | ATGCATATAAATTTCATATA+TGG | - | chr4_4:3056127-3056146 | None:intergenic | 15.0% |
| !! | AATCCTTATATTAAATCTAA+TGG | + | chr4_4:3056356-3056375 | Msa0664090:intron | 15.0% |
| !!! | ATATTGTTTGATTCATTTTA+AGG | - | chr4_4:3056648-3056667 | None:intergenic | 15.0% |
| !! | AAATGAATCAAACAATATAT+TGG | + | chr4_4:3056650-3056669 | Msa0664090:intron | 15.0% |
| !!! | TATTTTTGTTTTAAAATGTG+AGG | + | chr4_4:3056675-3056694 | Msa0664090:intron | 15.0% |
| !! | TAAAAATATCAATTTCTGTT+TGG | - | chr4_4:3056991-3057010 | None:intergenic | 15.0% |
| !! | AAATTACAAAGATATCAATA+TGG | + | chr4_4:3057065-3057084 | Msa0664090:intron | 15.0% |
| !! | AATTACAAAGATATCAATAT+GGG | + | chr4_4:3057066-3057085 | Msa0664090:intron | 15.0% |
| !!! | ACATTTATATTCTTTTTTGA+AGG | + | chr4_4:3057540-3057559 | Msa0664090:intron | 15.0% |
| !!! | ATTTCTAAAAACATAAATAC+AGG | - | chr4_4:3057603-3057622 | None:intergenic | 15.0% |
| !!! | AATTCAAGTTCAATAAATAT+TGG | + | chr4_4:3057655-3057674 | Msa0664090:intron | 15.0% |
| !!! | ATAAATATTGGAATTTTAGT+TGG | + | chr4_4:3057667-3057686 | Msa0664090:intron | 15.0% |
| !!! | CTTTAACATATTATGTTTTT+AGG | + | chr4_4:3058146-3058165 | Msa0664090:intron | 15.0% |
| !! | AATTCAACATGAAATTTATT+TGG | - | chr4_4:3058281-3058300 | None:intergenic | 15.0% |
| !!! | CATTTTTTTGTCATAAAAAA+AGG | - | chr4_4:3058349-3058368 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATGACAAAAAAA+TGG | + | chr4_4:3058347-3058366 | Msa0664090:intron | 15.0% |
| !! | ATTACCAAAACAAAAATATA+TGG | - | chr4_4:3058418-3058437 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTGGTAATTAAAT+TGG | + | chr4_4:3058423-3058442 | Msa0664090:intron | 15.0% |
| !! | TAATTAGATGAATTTAATAC+GGG | - | chr4_4:3058742-3058761 | None:intergenic | 15.0% |
| !!! | TGATTATGTATAATTGATTT+TGG | + | chr4_4:3059145-3059164 | Msa0664090:intron | 15.0% |
| !!! | CCTTAATTTTTTACTATATT+GGG | + | chr4_4:3059671-3059690 | Msa0664090:intron | 15.0% |
| !!! | TCTATCTGTTTTTATTTTAT+GGG | - | chr4_4:3059868-3059887 | None:intergenic | 15.0% |
| !!! | ATCTATCTGTTTTTATTTTA+TGG | - | chr4_4:3059869-3059888 | None:intergenic | 15.0% |
| !! | TAAAAACTTATGCTATAATT+GGG | - | chr4_4:3059913-3059932 | None:intergenic | 15.0% |
| !! | ATAAAAACTTATGCTATAAT+TGG | - | chr4_4:3059914-3059933 | None:intergenic | 15.0% |
| !! | ATATATAAAAAAGAAATGGA+CGG | + | chr4_4:3060428-3060447 | Msa0664090:intron | 15.0% |
| !! | GTTATAGTTTGAAAATAAAA+TGG | - | chr4_4:3060683-3060702 | None:intergenic | 15.0% |
| !! | AAGTATGTATTAATTTATCT+CGG | + | chr4_4:3061069-3061088 | Msa0664090:intron | 15.0% |
| !!! | CTTGATTTTAAGAATTTTTT+AGG | + | chr4_4:3061976-3061995 | Msa0664090:three_prime_UTR | 15.0% |
| !!! | TGATTTTAAGAATTTTTTAG+GGG | + | chr4_4:3061978-3061997 | Msa0664090:three_prime_UTR | 15.0% |
| !!! | TTTTGTTATGTTGTTTTTGT+TGG | + | chr4_4:3055599-3055618 | Msa0664090:intron | 20.0% |
| !!! | GATCAATAATTATTTTCGTT+AGG | - | chr4_4:3055809-3055828 | None:intergenic | 20.0% |
| !!! | TCAATTCTTAAAATGGATTT+TGG | - | chr4_4:3055867-3055886 | None:intergenic | 20.0% |
| !! | AGCAATATATCATCATTATT+TGG | + | chr4_4:3056079-3056098 | Msa0664090:intron | 20.0% |
| !! | TATCATCATTATTTGGTAAA+AGG | + | chr4_4:3056086-3056105 | Msa0664090:intron | 20.0% |
| !!! | TATATGTGTGTGTTTTATTT+TGG | + | chr4_4:3056185-3056204 | Msa0664090:intron | 20.0% |
| !! | TTAATAACTAAACCTTCTTA+AGG | - | chr4_4:3056281-3056300 | None:intergenic | 20.0% |
| !! | CAACCATTAGATTTAATATA+AGG | - | chr4_4:3056362-3056381 | None:intergenic | 20.0% |
| !! | CTTATATTAAATCTAATGGT+TGG | + | chr4_4:3056360-3056379 | Msa0664090:intron | 20.0% |
| !!! | ATACTGAATGACTTTTATTA+TGG | + | chr4_4:3056447-3056466 | Msa0664090:intron | 20.0% |
| !! | TTAAACAATCTATTTGTGAA+AGG | - | chr4_4:3056867-3056886 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTAGAAAAGAAAG+AGG | + | chr4_4:3057020-3057039 | Msa0664090:intron | 20.0% |
| !!! | ATACTAAAAGTGTAAATTAG+AGG | - | chr4_4:3057399-3057418 | None:intergenic | 20.0% |
| !! | TACATCACACTAATTTATTA+AGG | - | chr4_4:3057919-3057938 | None:intergenic | 20.0% |
| !!! | TTTTATAAACCACTTTTTGT+AGG | - | chr4_4:3057950-3057969 | None:intergenic | 20.0% |
| !!! | GTTTTTATAGGTACTTATAT+AGG | + | chr4_4:3058619-3058638 | Msa0664090:intron | 20.0% |
| !! | TAGAACAAAAAAAGATACTA+TGG | + | chr4_4:3058784-3058803 | Msa0664090:intron | 20.0% |
| !! | AGTATAATTAATTATGCCAT+TGG | - | chr4_4:3059304-3059323 | None:intergenic | 20.0% |
| !!! | TACATATATCACTACTTTTT+TGG | - | chr4_4:3059365-3059384 | None:intergenic | 20.0% |
| !!! | TTCATTTTCTCTTTTCTTAT+TGG | + | chr4_4:3059415-3059434 | Msa0664090:intron | 20.0% |
| !!! | GCCTTAATTTTTTACTATAT+TGG | + | chr4_4:3059670-3059689 | Msa0664090:intron | 20.0% |
| !! | CCCAATATAGTAAAAAATTA+AGG | - | chr4_4:3059674-3059693 | None:intergenic | 20.0% |
| !!! | AATGCAAAATTGCTTTTTTT+GGG | - | chr4_4:3059735-3059754 | None:intergenic | 20.0% |
| !!! | AAAAAAAGCAATTTTGCATT+GGG | + | chr4_4:3059735-3059754 | Msa0664090:intron | 20.0% |
| !!! | TACTATTTTGTTATCTTTGT+AGG | - | chr4_4:3060091-3060110 | None:intergenic | 20.0% |
| !! | AAAGATAACAAAATAGTAGT+AGG | + | chr4_4:3060093-3060112 | Msa0664090:intron | 20.0% |
| !! | AATTAATTAATCTCAACATG+CGG | - | chr4_4:3060356-3060375 | None:intergenic | 20.0% |
| !! | CATTCTCTTGTATATAAAAT+TGG | - | chr4_4:3060463-3060482 | None:intergenic | 20.0% |
| !! | TTATAAATTGTAATAGTGAC+GGG | - | chr4_4:3060717-3060736 | None:intergenic | 20.0% |
| !! | CTTATAAATTGTAATAGTGA+CGG | - | chr4_4:3060718-3060737 | None:intergenic | 20.0% |
| !! | CATTCAATTAATGATGTATA+AGG | - | chr4_4:3060797-3060816 | None:intergenic | 20.0% |
| !! | ATAGTACAATTCATATTTGT+TGG | + | chr4_4:3060863-3060882 | Msa0664090:intron | 20.0% |
| !!! | ACTTTTTTTTTGACAAACTT+AGG | + | chr4_4:3060920-3060939 | Msa0664090:intron | 20.0% |
| !!! | TAATCAATCAGTTATTTCTA+TGG | - | chr4_4:3061156-3061175 | None:intergenic | 20.0% |
| !! | AAAATTGTTTGAATATCTTC+TGG | - | chr4_4:3061600-3061619 | None:intergenic | 20.0% |
| !!! | TGAGTTGAAAATAAAGTATA+TGG | - | chr4_4:3061780-3061799 | None:intergenic | 20.0% |
| !! | TCATTTAATAATAGATGACA+AGG | + | chr4_4:3061800-3061819 | Msa0664090:three_prime_UTR | 20.0% |
| !! | CATTTAATAATAGATGACAA+GGG | + | chr4_4:3061801-3061820 | Msa0664090:three_prime_UTR | 20.0% |
| ! | AATATTGTTATAGACATCGT+TGG | + | chr4_4:3055399-3055418 | Msa0664090:intron | 25.0% |
| !!! | TCCATTTTAAGAATTGAAAG+TGG | + | chr4_4:3055870-3055889 | Msa0664090:intron | 25.0% |
| ! | TCCACTTTCAATTCTTAAAA+TGG | - | chr4_4:3055874-3055893 | None:intergenic | 25.0% |
| ! | ATATTTAATGACTGCAAAGT+TGG | + | chr4_4:3055914-3055933 | Msa0664090:intron | 25.0% |
| ! | TATTTAATGACTGCAAAGTT+GGG | + | chr4_4:3055915-3055934 | Msa0664090:intron | 25.0% |
| !!! | GTGTGTTTTATTTTGGTTTT+AGG | + | chr4_4:3056192-3056211 | Msa0664090:intron | 25.0% |
| ! | TTAGGTATCAAATTATCAAG+AGG | + | chr4_4:3056210-3056229 | Msa0664090:intron | 25.0% |
| !! | CAATATATTCTTCTTTTGAC+TGG | - | chr4_4:3056255-3056274 | None:intergenic | 25.0% |
| ! | CAGTCAAAAGAAGAATATAT+TGG | + | chr4_4:3056253-3056272 | Msa0664090:CDS | 25.0% |
| ! | AATATATTGGATCCTTAAGA+AGG | + | chr4_4:3056266-3056285 | Msa0664090:CDS | 25.0% |
| ! | GTGGAGAATCATATATTATA+AGG | - | chr4_4:3056307-3056326 | None:intergenic | 25.0% |
| ! | TAGAAAAATTGTAGAGTTTG+TGG | - | chr4_4:3056326-3056345 | None:intergenic | 25.0% |
| ! | AAGTTGTTGAATTAATCTAG+TGG | - | chr4_4:3056406-3056425 | None:intergenic | 25.0% |
| ! | GATTAATTCAACAACTTTGA+TGG | + | chr4_4:3056409-3056428 | Msa0664090:intron | 25.0% |
| !! | TCATTTTGCAATGAAAATAG+TGG | - | chr4_4:3056578-3056597 | None:intergenic | 25.0% |
| ! | ACGATATACTCTCTTTAATT+TGG | + | chr4_4:3056787-3056806 | Msa0664090:intron | 25.0% |
| ! | GTGAAAGGTAATATCAAAAA+GGG | - | chr4_4:3056852-3056871 | None:intergenic | 25.0% |
| ! | TGTGAAAGGTAATATCAAAA+AGG | - | chr4_4:3056853-3056872 | None:intergenic | 25.0% |
| ! | AATTTCTGTTTGGAAATTGA+GGG | - | chr4_4:3056981-3057000 | None:intergenic | 25.0% |
| ! | CTAGTAAAAAATAAGCTAGT+TGG | + | chr4_4:3057111-3057130 | Msa0664090:intron | 25.0% |
| !! | ATATGAGAGTGATTTTTCTT+TGG | - | chr4_4:3057156-3057175 | None:intergenic | 25.0% |
| !! | ATAATAATTGACTTCACGAT+AGG | + | chr4_4:3057201-3057220 | Msa0664090:intron | 25.0% |
| ! | TAGTAATATGTTTATGGTTG+TGG | - | chr4_4:3057281-3057300 | None:intergenic | 25.0% |
| ! | AAATTTGTAGTGTTTATGTG+TGG | - | chr4_4:3057335-3057354 | None:intergenic | 25.0% |
| ! | TGAATTTGATCCATAAAACT+CGG | - | chr4_4:3057641-3057660 | None:intergenic | 25.0% |
| !!! | CCTTCATACTTATTAGTTTT+AGG | - | chr4_4:3058188-3058207 | None:intergenic | 25.0% |
| ! | CCTAAAACTAATAAGTATGA+AGG | + | chr4_4:3058185-3058204 | Msa0664090:intron | 25.0% |
| ! | AGTTATAGTAGTAACTCATA+AGG | - | chr4_4:3058212-3058231 | None:intergenic | 25.0% |
| !! | TTTTAGCATTTCTCAATACA+AGG | + | chr4_4:3058299-3058318 | Msa0664090:intron | 25.0% |
| ! | AATGTAAATGTCAATAGGAA+TGG | - | chr4_4:3058390-3058409 | None:intergenic | 25.0% |
| ! | CCAAAACAAAAATATATGGA+GGG | - | chr4_4:3058414-3058433 | None:intergenic | 25.0% |
| ! | ACCAAAACAAAAATATATGG+AGG | - | chr4_4:3058415-3058434 | None:intergenic | 25.0% |
| !!! | TGTTTTGGTAATTAAATTGG+TGG | + | chr4_4:3058426-3058445 | Msa0664090:intron | 25.0% |
| ! | TATTTATACCTTGGAACTTA+TGG | + | chr4_4:3058544-3058563 | Msa0664090:CDS | 25.0% |
| ! | TGAAAATCATATATAGTGAG+TGG | - | chr4_4:3058575-3058594 | None:intergenic | 25.0% |
| ! | TATTAACACACCTTATTCTT+AGG | + | chr4_4:3058671-3058690 | Msa0664090:intron | 25.0% |
| !!! | ATGTCATTTTCATATGCATT+TGG | + | chr4_4:3058893-3058912 | Msa0664090:intron | 25.0% |
| !! | TTTTTCTTTCTCTATTGCTT+TGG | - | chr4_4:3059442-3059461 | None:intergenic | 25.0% |
| ! | AAAGCAATAGAGAAAGAAAA+AGG | + | chr4_4:3059441-3059460 | Msa0664090:intron | 25.0% |
| !!! | GGATTAGAATTGATTTTGAA+AGG | - | chr4_4:3059542-3059561 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTCTCTTTTAGA+TGG | - | chr4_4:3059563-3059582 | None:intergenic | 25.0% |
| !!! | CAATGCAAAATTGCTTTTTT+TGG | - | chr4_4:3059736-3059755 | None:intergenic | 25.0% |
| !! | CAAAAAAAGCAATTTTGCAT+TGG | + | chr4_4:3059734-3059753 | Msa0664090:intron | 25.0% |
| ! | AATATGCAATCAAATCTAGT+TGG | + | chr4_4:3060132-3060151 | Msa0664090:intron | 25.0% |
| ! | TTTATTAAGCAGTTGAAGTT+TGG | - | chr4_4:3060173-3060192 | None:intergenic | 25.0% |
| !!! | TCAAAAAAAAGCTTTGAGTA+AGG | + | chr4_4:3060328-3060347 | Msa0664090:intron | 25.0% |
| !! | TATTGTCACTTAATATTGCA+AGG | + | chr4_4:3060597-3060616 | Msa0664090:intron | 25.0% |
| !! | ACTCTCTTGTTATATAATTG+AGG | + | chr4_4:3061015-3061034 | Msa0664090:intron | 25.0% |
| !! | CTCTCTTGTTATATAATTGA+GGG | + | chr4_4:3061016-3061035 | Msa0664090:intron | 25.0% |
| !!! | TTTTTTGTGTGTAGTAAATC+CGG | - | chr4_4:3061044-3061063 | None:intergenic | 25.0% |
| ! | ATCCATTTATGTTTGTGTTA+TGG | + | chr4_4:3061234-3061253 | Msa0664090:intron | 25.0% |
| ! | ACTAAGATCAAAGTTTGTAA+CGG | - | chr4_4:3061328-3061347 | None:intergenic | 25.0% |
| !! | AATGATGATGACAACATATT+TGG | + | chr4_4:3061651-3061670 | Msa0664090:CDS | 25.0% |
| ! | TTGATTAGAAGGAGAAATTA+TGG | + | chr4_4:3061722-3061741 | Msa0664090:exon | 25.0% |
| ! | AGAGTAAACAATTTAGAGAA+TGG | + | chr4_4:3061854-3061873 | Msa0664090:three_prime_UTR | 25.0% |
| ! | GAGTAAACAATTTAGAGAAT+GGG | + | chr4_4:3061855-3061874 | Msa0664090:three_prime_UTR | 25.0% |
| ! | AGTAAACAATTTAGAGAATG+GGG | + | chr4_4:3061856-3061875 | Msa0664090:three_prime_UTR | 25.0% |
| ACAAAGAAGCTCAGTTTATA+GGG | + | chr4_4:3055288-3055307 | Msa0664090:CDS | 30.0% | |
| !!! | GTTTTTGTGTCCTCTAAAAT+TGG | + | chr4_4:3055366-3055385 | Msa0664090:intron | 30.0% |
| ! | ATGAATGCTACCAATTTTAG+AGG | - | chr4_4:3055379-3055398 | None:intergenic | 30.0% |
| AATGAATCACAAAGCAAGAA+AGG | + | chr4_4:3055464-3055483 | Msa0664090:CDS | 30.0% | |
| !!! | TATGTTGTTTTTGTTGGTGA+TGG | + | chr4_4:3055605-3055624 | Msa0664090:intron | 30.0% |
| GACACAAATTAATCATACCT+AGG | - | chr4_4:3055660-3055679 | None:intergenic | 30.0% | |
| !! | TGTCAAATGAGTTTTAGTGA+AGG | + | chr4_4:3055756-3055775 | Msa0664090:intron | 30.0% |
| !!! | AAAGTTGGGTTTGTTTTGTT+AGG | + | chr4_4:3055929-3055948 | Msa0664090:intron | 30.0% |
| !!! | AAGTTGGGTTTGTTTTGTTA+GGG | + | chr4_4:3055930-3055949 | Msa0664090:intron | 30.0% |
| GAAAATTGAGAATTGTGTCT+TGG | - | chr4_4:3056018-3056037 | None:intergenic | 30.0% | |
| CAATTTCTGTTTGGAAATTG+AGG | - | chr4_4:3056982-3057001 | None:intergenic | 30.0% | |
| ! | TGTAATTTCCTTCCTTTTCT+AGG | - | chr4_4:3057053-3057072 | None:intergenic | 30.0% |
| !!! | GCTTATTTTTTACTAGTGAC+CGG | - | chr4_4:3057107-3057126 | None:intergenic | 30.0% |
| ! | GATTCGTAAATTGTTGACTA+TGG | - | chr4_4:3057251-3057270 | None:intergenic | 30.0% |
| GGTGGTTAGTAATATGTTTA+TGG | - | chr4_4:3057287-3057306 | None:intergenic | 30.0% | |
| GTTGTGGGTAATTTATAATC+AGG | - | chr4_4:3057308-3057327 | None:intergenic | 30.0% | |
| GAATTTGATCCATAAAACTC+GGG | - | chr4_4:3057640-3057659 | None:intergenic | 30.0% | |
| TAGTCAAAATGTGCTTAAGT+AGG | + | chr4_4:3057733-3057752 | Msa0664090:intron | 30.0% | |
| AGTCTCATAGTAGATTTGAA+TGG | + | chr4_4:3057876-3057895 | Msa0664090:intron | 30.0% | |
| ATCAAAGATCCTACAAAAAG+TGG | + | chr4_4:3057938-3057957 | Msa0664090:intron | 30.0% | |
| ATTTCTCAATACAAGGTAGT+TGG | + | chr4_4:3058306-3058325 | Msa0664090:intron | 30.0% | |
| AAAATGGGTAACTACCTTTA+TGG | + | chr4_4:3058363-3058382 | Msa0664090:intron | 30.0% | |
| AGGGTAATGTAAATGTCAAT+AGG | - | chr4_4:3058395-3058414 | None:intergenic | 30.0% | |
| !! | CCCTCCATATATTTTTGTTT+TGG | + | chr4_4:3058411-3058430 | Msa0664090:intron | 30.0% |
| GGCAACAAATATTTATACCT+TGG | + | chr4_4:3058535-3058554 | Msa0664090:CDS | 30.0% | |
| GTGTGTTAATAGTAGTATGT+AGG | - | chr4_4:3058662-3058681 | None:intergenic | 30.0% | |
| TGACATGAAACCTAAGAATA+AGG | - | chr4_4:3058684-3058703 | None:intergenic | 30.0% | |
| !! | TTGGATTTGGAAGCATTTAT+AGG | + | chr4_4:3058966-3058985 | Msa0664090:intron | 30.0% |
| CACACAAGTTACTATACTAA+AGG | + | chr4_4:3059080-3059099 | Msa0664090:intron | 30.0% | |
| TTGGAAGTGGATAATTGATT+TGG | - | chr4_4:3059346-3059365 | None:intergenic | 30.0% | |
| !!! | TATCACTACTTTTTTGGAAG+TGG | - | chr4_4:3059359-3059378 | None:intergenic | 30.0% |
| GAGAGAAAGTTGTAATAAAG+TGG | + | chr4_4:3059497-3059516 | Msa0664090:intron | 30.0% | |
| GTTGTAATAAAGTGGTTGTA+CGG | + | chr4_4:3059505-3059524 | Msa0664090:intron | 30.0% | |
| !! | GTTGTTCTCTAAAGTTTGTT+GGG | - | chr4_4:3059648-3059667 | None:intergenic | 30.0% |
| !! | AGTTGTTCTCTAAAGTTTGT+TGG | - | chr4_4:3059649-3059668 | None:intergenic | 30.0% |
| AATAGATTCCCGAAATTTCA+GGG | - | chr4_4:3060007-3060026 | None:intergenic | 30.0% | |
| AAATAGATTCCCGAAATTTC+AGG | - | chr4_4:3060008-3060027 | None:intergenic | 30.0% | |
| AATTTCGGGAATCTATTTGA+CGG | + | chr4_4:3060010-3060029 | Msa0664090:intron | 30.0% | |
| !!! | CCATTTTGAAATGAAGTAGT+AGG | - | chr4_4:3060067-3060086 | None:intergenic | 30.0% |
| CCTACTACTTCATTTCAAAA+TGG | + | chr4_4:3060064-3060083 | Msa0664090:intron | 30.0% | |
| ATAGTAGTAGGATAATCCAA+AGG | + | chr4_4:3060105-3060124 | Msa0664090:intron | 30.0% | |
| !!! | TGATTGCATATTTTGACCTT+TGG | - | chr4_4:3060124-3060143 | None:intergenic | 30.0% |
| TAGTTTGAATGAAAGACCTA+GGG | - | chr4_4:3060235-3060254 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAATGAAAGACCT+AGG | - | chr4_4:3060236-3060255 | None:intergenic | 30.0% |
| CATTCATTAAATGACGTATG+TGG | + | chr4_4:3060758-3060777 | Msa0664090:intron | 30.0% | |
| AAAGTCTAAGTAGACATGAA+AGG | - | chr4_4:3060905-3060924 | None:intergenic | 30.0% | |
| TGTTATATAATTGAGGGATC+CGG | + | chr4_4:3061022-3061041 | Msa0664090:intron | 30.0% | |
| CTCCATAACACAAACATAAA+TGG | - | chr4_4:3061239-3061258 | None:intergenic | 30.0% | |
| !!! | TATTGCTAGCATTTTGACTA+CGG | - | chr4_4:3061404-3061423 | None:intergenic | 30.0% |
| ! | TCTAACATGTCTTCGAATTT+TGG | - | chr4_4:3061504-3061523 | None:intergenic | 30.0% |
| GTTAGAAAATTCATCGTCAT+CGG | + | chr4_4:3061518-3061537 | Msa0664090:CDS | 30.0% | |
| ! | CTGCACCAATTTTTCATTAT+GGG | + | chr4_4:3061691-3061710 | Msa0664090:CDS | 30.0% |
| TCAAGCCCATAATGAAAAAT+TGG | - | chr4_4:3061699-3061718 | None:intergenic | 30.0% | |
| TCACAGTTGTAAGAAATGAT+TGG | - | chr4_4:3061933-3061952 | None:intergenic | 30.0% | |
| TGAGTAAAAGCTTCCATTCA+TGG | + | chr4_4:3055162-3055181 | Msa0664090:exon | 35.0% | |
| TGAGATTTCTTAGCCATGAA+TGG | - | chr4_4:3055178-3055197 | None:intergenic | 35.0% | |
| CTATAAACTGAGCTTCTTTG+TGG | - | chr4_4:3055289-3055308 | None:intergenic | 35.0% | |
| CACAAAGAAGCTCAGTTTAT+AGG | + | chr4_4:3055287-3055306 | Msa0664090:CDS | 35.0% | |
| CAAAGAAGCTCAGTTTATAG+GGG | + | chr4_4:3055289-3055308 | Msa0664090:CDS | 35.0% | |
| TCGATATGAAGCTCATTTGT+GGG | + | chr4_4:3055427-3055446 | Msa0664090:CDS | 35.0% | |
| ATTTGTGGGATAAGAATTGC+TGG | + | chr4_4:3055441-3055460 | Msa0664090:CDS | 35.0% | |
| ATTGGATATGCAGTATACCT+AGG | + | chr4_4:3055640-3055659 | Msa0664090:intron | 35.0% | |
| ! | TTTGGCATTGAGAAACCAAA+TGG | + | chr4_4:3055722-3055741 | Msa0664090:intron | 35.0% |
| !! | GTTTTAGTGAAGGTCGAATT+AGG | + | chr4_4:3055766-3055785 | Msa0664090:intron | 35.0% |
| ! | TTTTCGTTAGGACTCGAATT+TGG | - | chr4_4:3055797-3055816 | None:intergenic | 35.0% |
| !!! | AGTTGGGTTTGTTTTGTTAG+GGG | + | chr4_4:3055931-3055950 | Msa0664090:intron | 35.0% |
| AATTATCAAGAGGAGCTCAA+AGG | + | chr4_4:3056220-3056239 | Msa0664090:CDS | 35.0% | |
| ATTATCAAGAGGAGCTCAAA+GGG | + | chr4_4:3056221-3056240 | Msa0664090:CDS | 35.0% | |
| ATTCAACAACTTTGATGGAG+AGG | + | chr4_4:3056414-3056433 | Msa0664090:intron | 35.0% | |
| TCGATTTACAGAAAAAGCAG+TGG | + | chr4_4:3056510-3056529 | Msa0664090:intron | 35.0% | |
| !! | AAAAGCAGTGGATTTTCTAG+AGG | + | chr4_4:3056522-3056541 | Msa0664090:CDS | 35.0% |
| !!! | TTTTTTACTAGTGACCGGAT+GGG | - | chr4_4:3057102-3057121 | None:intergenic | 35.0% |
| !!! | ATTTTTTACTAGTGACCGGA+TGG | - | chr4_4:3057103-3057122 | None:intergenic | 35.0% |
| !!! | GATTTTTCTTTGGTTCTCTG+TGG | - | chr4_4:3057146-3057165 | None:intergenic | 35.0% |
| ! | ATTGTTGACTATGGATTGAG+AGG | - | chr4_4:3057242-3057261 | None:intergenic | 35.0% |
| GTGGGTAATTTATAATCAGG+TGG | - | chr4_4:3057305-3057324 | None:intergenic | 35.0% | |
| GTGTAAATTAGAGGATGTGA+TGG | - | chr4_4:3057390-3057409 | None:intergenic | 35.0% | |
| TCAATAGGAATGGACCATAA+AGG | - | chr4_4:3058380-3058399 | None:intergenic | 35.0% | |
| TAATACGGGTCTTAATCACA+TGG | - | chr4_4:3058728-3058747 | None:intergenic | 35.0% | |
| GCGAGCAAACACATTTAATT+TGG | + | chr4_4:3058836-3058855 | Msa0664090:intron | 35.0% | |
| TGGCTTCACATATTTGGATT+TGG | + | chr4_4:3058953-3058972 | Msa0664090:intron | 35.0% | |
| ! | ACCAAACTAGTCTAGTTCAA+TGG | + | chr4_4:3059956-3059975 | Msa0664090:intron | 35.0% |
| ! | TCCATTGAACTAGACTAGTT+TGG | - | chr4_4:3059960-3059979 | None:intergenic | 35.0% |
| TGTATCTACCCCTGAAATTT+CGG | + | chr4_4:3059995-3060014 | Msa0664090:intron | 35.0% | |
| ATAGATTCCCGAAATTTCAG+GGG | - | chr4_4:3060006-3060025 | None:intergenic | 35.0% | |
| TGATATCATTCTTTCACCCT+AGG | + | chr4_4:3060216-3060235 | Msa0664090:intron | 35.0% | |
| ATTAATACGTCGTCATAGGT+GGG | - | chr4_4:3060267-3060286 | None:intergenic | 35.0% | |
| AATTAATACGTCGTCATAGG+TGG | - | chr4_4:3060268-3060287 | None:intergenic | 35.0% | |
| GTCAATTAATACGTCGTCAT+AGG | - | chr4_4:3060271-3060290 | None:intergenic | 35.0% | |
| CTTATGCAAGCTTATGAGTA+AGG | + | chr4_4:3060300-3060319 | Msa0664090:intron | 35.0% | |
| GCAAGGTTAAATTCCTTTCA+CGG | + | chr4_4:3060614-3060633 | Msa0664090:intron | 35.0% | |
| CAAGGTTAAATTCCTTTCAC+GGG | + | chr4_4:3060615-3060634 | Msa0664090:intron | 35.0% | |
| AAGGTTAAATTCCTTTCACG+GGG | + | chr4_4:3060616-3060635 | Msa0664090:intron | 35.0% | |
| ! | AAATTGTAATAGTGACGGGA+GGG | - | chr4_4:3060713-3060732 | None:intergenic | 35.0% |
| ! | TAAATTGTAATAGTGACGGG+AGG | - | chr4_4:3060714-3060733 | None:intergenic | 35.0% |
| CTGGATCTTAATCAAGAACT+TGG | + | chr4_4:3061432-3061451 | Msa0664090:CDS | 35.0% | |
| GATCTTAATCAAGAACTTGG+TGG | + | chr4_4:3061435-3061454 | Msa0664090:CDS | 35.0% | |
| ! | GCTGCACCAATTTTTCATTA+TGG | + | chr4_4:3061690-3061709 | Msa0664090:CDS | 35.0% |
| TTTACGTTTACGTTTCACCG+CGG | - | chr4_4:3055245-3055264 | None:intergenic | 40.0% | |
| TAAACTGAGCTTCTTTGTGG+AGG | - | chr4_4:3055286-3055305 | None:intergenic | 40.0% | |
| TGTTATAGACATCGTTGGAC+CGG | + | chr4_4:3055404-3055423 | Msa0664090:intron | 40.0% | |
| CAAATGAGCTTCATATCGAC+CGG | - | chr4_4:3055426-3055445 | None:intergenic | 40.0% | |
| GTCGATATGAAGCTCATTTG+TGG | + | chr4_4:3055426-3055445 | Msa0664090:CDS | 40.0% | |
| CAAAGCAAGAAAGGAAGACA+AGG | + | chr4_4:3055473-3055492 | Msa0664090:CDS | 40.0% | |
| !!! | GTTTTTGTTGGTGATGGCAA+TGG | + | chr4_4:3055611-3055630 | Msa0664090:intron | 40.0% |
| TGATGGCAATGGAAATCGAT+TGG | + | chr4_4:3055622-3055641 | Msa0664090:intron | 40.0% | |
| GACATTTGAATCCAGCCATT+TGG | - | chr4_4:3055740-3055759 | None:intergenic | 40.0% | |
| TGAAAGTGGATAGTAGCTAG+TGG | + | chr4_4:3055884-3055903 | Msa0664090:intron | 40.0% | |
| GAAAGTGGATAGTAGCTAGT+GGG | + | chr4_4:3055885-3055904 | Msa0664090:intron | 40.0% | |
| AGAGGAGTCTCAAAATACAG+AGG | + | chr4_4:3056540-3056559 | Msa0664090:CDS | 40.0% | |
| ! | CAAAATACAGAGGTGTAGCA+AGG | + | chr4_4:3056550-3056569 | Msa0664090:CDS | 40.0% |
| ! | TTCCTTCCTTTTCTAGGCTT+AGG | - | chr4_4:3057047-3057066 | None:intergenic | 40.0% |
| TTTATGTGTGGCAGAGTTGT+GGG | - | chr4_4:3057323-3057342 | None:intergenic | 40.0% | |
| ! | GTATCTTTGCCCGAGTTTTA+TGG | + | chr4_4:3057628-3057647 | Msa0664090:intron | 40.0% |
| !! | ACAAGGTAGTTGGTGACAAA+TGG | + | chr4_4:3058316-3058335 | Msa0664090:intron | 40.0% |
| !! | CAAGGTAGTTGGTGACAAAT+GGG | + | chr4_4:3058317-3058336 | Msa0664090:intron | 40.0% |
| ATGTTTAGACACCACCACAA+TGG | + | chr4_4:3058481-3058500 | Msa0664090:intron | 40.0% | |
| !! | TGGAAGTACCATAAGTTCCA+AGG | - | chr4_4:3058555-3058574 | None:intergenic | 40.0% |
| ! | ATCATTTCTGCCCATTTTCG+TGG | + | chr4_4:3058919-3058938 | Msa0664090:intron | 40.0% |
| ACACCTTTGTCCACGAAAAT+GGG | - | chr4_4:3058932-3058951 | None:intergenic | 40.0% | |
| TACACCTTTGTCCACGAAAA+TGG | - | chr4_4:3058933-3058952 | None:intergenic | 40.0% | |
| !! | TTTTCGTGGACAAAGGTGTA+TGG | + | chr4_4:3058933-3058952 | Msa0664090:intron | 40.0% |
| GGTGTATGGCTTCACATATT+TGG | + | chr4_4:3058947-3058966 | Msa0664090:intron | 40.0% | |
| TACTCTTTCCATGTGTCATC+AGG | - | chr4_4:3059002-3059021 | None:intergenic | 40.0% | |
| !! | GAATTGCTTTTCCTCGTAGT+AGG | - | chr4_4:3059282-3059301 | None:intergenic | 40.0% |
| ACGAGGAAAAGCAATTCCAA+TGG | + | chr4_4:3059285-3059304 | Msa0664090:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr4_4:3059694-3059713 | Msa0664090:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr4_4:3059695-3059714 | Msa0664090:intron | 40.0% |
| TTCCTTAACATGTGCCCTTA+GGG | - | chr4_4:3059712-3059731 | None:intergenic | 40.0% | |
| TTCTTAACATGTGCCCTTGA+GGG | + | chr4_4:3059826-3059845 | Msa0664090:intron | 40.0% | |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | - | chr4_4:3059842-3059861 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | - | chr4_4:3059843-3059862 | None:intergenic | 40.0% |
| GTATCTACCCCTGAAATTTC+GGG | + | chr4_4:3059996-3060015 | Msa0664090:intron | 40.0% | |
| TCTTGATTGCATTTGAAGGC+AGG | - | chr4_4:3060038-3060057 | None:intergenic | 40.0% | |
| CCTCTCTTGATTGCATTTGA+AGG | - | chr4_4:3060042-3060061 | None:intergenic | 40.0% | |
| CCTTCAAATGCAATCAAGAG+AGG | + | chr4_4:3060039-3060058 | Msa0664090:intron | 40.0% | |
| GTCTAAGTAGACATGAAAGG+AGG | - | chr4_4:3060902-3060921 | None:intergenic | 40.0% | |
| ATGGCAGCAATAGAGTATAG+AGG | + | chr4_4:3061294-3061313 | Msa0664090:CDS | 40.0% | |
| TGGCAGCAATAGAGTATAGA+GGG | + | chr4_4:3061295-3061314 | Msa0664090:CDS | 40.0% | |
| TTACTATCGTCGTTGTCTTG+TGG | - | chr4_4:3061378-3061397 | None:intergenic | 40.0% | |
| TGCTAGCAATAATCAAGAGC+TGG | + | chr4_4:3061413-3061432 | Msa0664090:CDS | 40.0% | |
| ! | CTTAATCAAGAACTTGGTGG+TGG | + | chr4_4:3061438-3061457 | Msa0664090:CDS | 40.0% |
| ATAAGATCAGTCGAAGATGC+TGG | - | chr4_4:3061471-3061490 | None:intergenic | 40.0% | |
| TCAAATCAACCATTCCACGT+CGG | + | chr4_4:3061568-3061587 | Msa0664090:CDS | 40.0% | |
| CTTTGTGGAGGTGAGTTTCT+TGG | - | chr4_4:3055274-3055293 | None:intergenic | 45.0% | |
| !! | CAGTTTATAGGGGTGTCACA+AGG | + | chr4_4:3055299-3055318 | Msa0664090:CDS | 45.0% |
| GCATTGAGAAACCAAATGGC+TGG | + | chr4_4:3055726-3055745 | Msa0664090:intron | 45.0% | |
| CTTGTTTCGTAGTCGAACTG+AGG | + | chr4_4:3055837-3055856 | Msa0664090:intron | 45.0% | |
| CTTCAATGCTGCCAAGTCAT+AGG | - | chr4_4:3055987-3056006 | None:intergenic | 45.0% | |
| ! | ACTTGGCAGCATTGAAGTAC+TGG | + | chr4_4:3055990-3056009 | Msa0664090:CDS | 45.0% |
| ! | CTTGGCAGCATTGAAGTACT+GGG | + | chr4_4:3055991-3056010 | Msa0664090:CDS | 45.0% |
| !! | TTGGCAGCATTGAAGTACTG+GGG | + | chr4_4:3055992-3056011 | Msa0664090:CDS | 45.0% |
| AGAGGACCTAAGCCTAGAAA+AGG | + | chr4_4:3057038-3057057 | Msa0664090:intron | 45.0% | |
| GACCTAAGCCTAGAAAAGGA+AGG | + | chr4_4:3057042-3057061 | Msa0664090:intron | 45.0% | |
| GTTTATGTGTGGCAGAGTTG+TGG | - | chr4_4:3057324-3057343 | None:intergenic | 45.0% | |
| ! | TTAGAGGATGTGATGGTGAG+TGG | - | chr4_4:3057383-3057402 | None:intergenic | 45.0% |
| ATTAACCCATGATACCCACG+TGG | + | chr4_4:3057765-3057784 | Msa0664090:intron | 45.0% | |
| TTATCAGTAGCAGACCACGT+GGG | - | chr4_4:3057782-3057801 | None:intergenic | 45.0% | |
| TTTATCAGTAGCAGACCACG+TGG | - | chr4_4:3057783-3057802 | None:intergenic | 45.0% | |
| ACACCACCACAATGGAAGAT+GGG | + | chr4_4:3058489-3058508 | Msa0664090:CDS | 45.0% | |
| TCATGTGTCCTGATGACACA+TGG | + | chr4_4:3058991-3059010 | Msa0664090:intron | 45.0% | |
| AAGTTGCAAGTCCTACTACG+AGG | + | chr4_4:3059268-3059287 | Msa0664090:intron | 45.0% | |
| GTTCCTTAACATGTGCCCTT+AGG | - | chr4_4:3059713-3059732 | None:intergenic | 45.0% | |
| CTTCTTAACATGTGCCCTTG+AGG | + | chr4_4:3059825-3059844 | Msa0664090:intron | 45.0% | |
| TGAAATGCTAACCCCGTGAA+AGG | - | chr4_4:3060630-3060649 | None:intergenic | 45.0% | |
| TCGTCGTTGTCTTGTGGTTT+AGG | - | chr4_4:3061372-3061391 | None:intergenic | 45.0% | |
| !! | GGAATGGTTGATTTGACAGG+CGG | - | chr4_4:3061564-3061583 | None:intergenic | 45.0% |
| !! | CGTGGAATGGTTGATTTGAC+AGG | - | chr4_4:3061567-3061586 | None:intergenic | 45.0% |
| GGGCTTGATGCTTGATTAGA+AGG | + | chr4_4:3061711-3061730 | Msa0664090:exon | 45.0% | |
| GCTCTTACGTGTCATCTTGT+TGG | - | chr4_4:3061957-3061976 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTTTGTTTTTAT+AGG | + | chr4_4:3058607-3058626 | Msa0664090:intron | 5.0% |
| !! | ATTTATATATAAAAAAGAAA+TGG | + | chr4_4:3060424-3060443 | Msa0664090:intron | 5.0% |
| TCAAGAGGAGCTCAAAGGGA+TGG | + | chr4_4:3056225-3056244 | Msa0664090:CDS | 50.0% | |
| GACACCACCACAATGGAAGA+TGG | + | chr4_4:3058488-3058507 | Msa0664090:intron | 50.0% | |
| CTTCCCATCTTCCATTGTGG+TGG | - | chr4_4:3058495-3058514 | None:intergenic | 50.0% | |
| GAGCTTCCCATCTTCCATTG+TGG | - | chr4_4:3058498-3058517 | None:intergenic | 50.0% | |
| GGAAGATGGGAAGCTCGAAT+TGG | + | chr4_4:3058502-3058521 | Msa0664090:CDS | 50.0% | |
| ATGGGAAGCTCGAATTGGCA+GGG | + | chr4_4:3058507-3058526 | Msa0664090:CDS | 50.0% | |
| GTGTTTGCTCGCTCACTCTT+TGG | - | chr4_4:3058828-3058847 | None:intergenic | 50.0% | |
| ! | CTGCCCATTTTCGTGGACAA+AGG | + | chr4_4:3058926-3058945 | Msa0664090:intron | 50.0% |
| ! | TGCCCTAAGGGCACATGTTA+AGG | + | chr4_4:3059707-3059726 | Msa0664090:intron | 50.0% |
| ! | TACGTCGTCATAGGTGGGTT+TGG | - | chr4_4:3060262-3060281 | None:intergenic | 50.0% |
| AGCAGCCACAGCTTATGACA+TGG | + | chr4_4:3061275-3061294 | Msa0664090:CDS | 50.0% | |
| TGCTGCCATGTCATAAGCTG+TGG | - | chr4_4:3061283-3061302 | None:intergenic | 50.0% | |
| ATCAGTCGAAGATGCTGGTG+TGG | - | chr4_4:3061466-3061485 | None:intergenic | 50.0% | |
| !! | ATGGTTGATTTGACAGGCGG+TGG | - | chr4_4:3061561-3061580 | None:intergenic | 50.0% |
| TGGAAATGTCCGACGTGGAA+TGG | - | chr4_4:3061580-3061599 | None:intergenic | 50.0% | |
| ! | TCTTCTGGAAATGTCCGACG+TGG | - | chr4_4:3061585-3061604 | None:intergenic | 50.0% |
| TTCTTCCTCTTCCACCACCG+CGG | + | chr4_4:3055225-3055244 | Msa0664090:CDS | 55.0% | |
| TTTACGTTTCACCGCGGTGG+TGG | - | chr4_4:3055239-3055258 | None:intergenic | 55.0% | |
| ACGTTTACGTTTCACCGCGG+TGG | - | chr4_4:3055242-3055261 | None:intergenic | 55.0% | |
| TGCAGCACGTGCCTATGACT+TGG | + | chr4_4:3055973-3055992 | Msa0664090:CDS | 55.0% | |
| GAGGAGCTCAAAGGGATGGA+AGG | + | chr4_4:3056229-3056248 | Msa0664090:CDS | 55.0% | |
| TGGGAGAAGCAACTCCCATC+CGG | + | chr4_4:3057085-3057104 | Msa0664090:intron | 55.0% | |
| ! | GGATGTGATGGTGAGTGGCT+TGG | - | chr4_4:3057378-3057397 | None:intergenic | 55.0% |
| GCAGACCACGTGGGTATCAT+GGG | - | chr4_4:3057773-3057792 | None:intergenic | 55.0% | |
| AGCAGACCACGTGGGTATCA+TGG | - | chr4_4:3057774-3057793 | None:intergenic | 55.0% | |
| GATGGGAAGCTCGAATTGGC+AGG | + | chr4_4:3058506-3058525 | Msa0664090:CDS | 55.0% | |
| GCTCGAATTGGCAGGGTCTT+CGG | + | chr4_4:3058514-3058533 | Msa0664090:CDS | 55.0% | |
| !! | TTTCACCGCGGTGGTGGAAG+AGG | - | chr4_4:3055233-3055252 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 3055118 | 3062031 | 3055118 | ID=Msa0664090;Name=Msa0664090 |
| chr4_4 | mRNA | 3055118 | 3062031 | 3055118 | ID=Msa0664090-mRNA-1;Parent=Msa0664090;Name=Msa0664090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=63|1|1|1|1|1|7|306|325 |
| chr4_4 | exon | 3055118 | 3055320 | 3055118 | ID=Msa0664090-mRNA-1:exon:875;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3055412 | 3055494 | 3055412 | ID=Msa0664090-mRNA-1:exon:876;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3055951 | 3056039 | 3055951 | ID=Msa0664090-mRNA-1:exon:877;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3056214 | 3056287 | 3056214 | ID=Msa0664090-mRNA-1:exon:878;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3056521 | 3056571 | 3056521 | ID=Msa0664090-mRNA-1:exon:879;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3058489 | 3058565 | 3058489 | ID=Msa0664090-mRNA-1:exon:880;Parent=Msa0664090-mRNA-1 |
| chr4_4 | exon | 3061262 | 3062031 | 3061262 | ID=Msa0664090-mRNA-1:exon:881;Parent=Msa0664090-mRNA-1 |
| chr4_4 | five_prime_UTR | 3055118 | 3055180 | 3055118 | ID=Msa0664090-mRNA-1:five_prime_utr;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3055181 | 3055320 | 3055181 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3055412 | 3055494 | 3055412 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3055951 | 3056039 | 3055951 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3056214 | 3056287 | 3056214 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3056521 | 3056571 | 3056521 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3058489 | 3058565 | 3058489 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | CDS | 3061262 | 3061725 | 3061262 | ID=Msa0664090-mRNA-1:cds;Parent=Msa0664090-mRNA-1 |
| chr4_4 | three_prime_UTR | 3061726 | 3062031 | 3061726 | ID=Msa0664090-mRNA-1:three_prime_utr;Parent=Msa0664090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
