AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742640 MtrunA17_Chr2g0277631 98.667 225 3 0 1 225 229 453 1.40e-161 454
Msa0742640 MtrunA17_Chr5g0444531 98.222 225 4 0 1 225 231 455 2.22e-161 454
Msa0742640 MtrunA17_Chr1g0197901 35.065 231 135 5 2 223 401 625 1.51e-32 124
Msa0742640 MtrunA17_Chr8g0343061 33.772 228 144 3 1 223 318 543 2.91e-28 111
Msa0742640 MtrunA17_Chr4g0067561 31.604 212 138 4 20 225 309 519 1.09e-23 98.6
Msa0742640 MtrunA17_Chr1g0210021 33.684 190 119 4 39 223 283 470 2.07e-21 91.7
Msa0742640 MtrunA17_Chr1g0200441 31.847 157 101 3 69 221 301 455 1.47e-18 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742640 AT4G26910.3 85.778 225 32 0 1 225 141 365 8.45e-145 409
Msa0742640 AT4G26910.2 85.778 225 32 0 1 225 239 463 5.60e-144 410
Msa0742640 AT4G26910.1 85.778 225 32 0 1 225 240 464 6.04e-144 410
Msa0742640 AT5G55070.1 85.778 225 32 0 1 225 240 464 9.57e-143 407
Msa0742640 AT5G55070.2 85.778 225 32 0 1 225 240 464 9.57e-143 407
Msa0742640 AT3G52200.1 37.391 230 131 5 2 223 413 637 8.00e-35 130
Msa0742640 AT3G52200.2 37.391 230 131 5 2 223 489 713 1.03e-34 130
Msa0742640 AT1G54220.1 33.333 228 143 5 2 223 315 539 2.06e-28 112
Msa0742640 AT1G54220.2 33.333 228 143 5 2 223 315 539 2.06e-28 112
Msa0742640 AT3G13930.1 34.783 230 137 6 2 223 315 539 6.98e-28 110
Msa0742640 AT3G06850.1 28.571 203 141 3 26 225 281 482 6.43e-23 96.7
Msa0742640 AT3G06850.2 28.571 203 141 3 26 225 281 482 6.43e-23 96.7
Msa0742640 AT3G25860.1 33.684 190 119 4 39 223 293 480 3.78e-20 88.6
Msa0742640 AT1G34430.1 32.484 157 100 3 69 221 309 463 1.55e-18 84.0

Find 116 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTACGATGCATATTA+TGG 0.197684 5_1:+62605462 Msa0742640:three_prime_UTR
ATATCAAATGGTGGTGTTTA+TGG 0.206829 5_1:+62604581 Msa0742640:CDS
CCTCCGGCTCACTAGCCTTT+GGG 0.238417 5_1:-62598896 None:intergenic
CTTTGTGGAGCAGGTGCTTT+AGG 0.246900 5_1:-62598957 None:intergenic
ACCTGAGGTGGGTTGATAAT+AGG 0.248348 5_1:-62604620 None:intergenic
TCTGTTGTAGTTTCAACTTT+AGG 0.270428 5_1:-62598930 None:intergenic
TGAAAAGCATGGAGTCAAAT+TGG 0.271200 5_1:+62603835 Msa0742640:CDS
TCAGCATAGCAAATGTGTTT+TGG 0.289140 5_1:-62599157 None:intergenic
GATTCTTCCTGAAGTAATAA+TGG 0.308449 5_1:+62605485 Msa0742640:three_prime_UTR
CCTGAGGTGGGTTGATAATA+GGG 0.311518 5_1:-62604619 None:intergenic
CTAGCCTTTGGGGCTGGCTT+AGG 0.329554 5_1:-62598885 None:intergenic
CTCTTCCATCAATGATTCTA+TGG 0.339946 5_1:-62605141 None:intergenic
TTAAATCCCATTATTACTTC+AGG 0.342126 5_1:-62605492 None:intergenic
GTCAAATTGGGACTTATGTC+TGG 0.343056 5_1:+62603848 Msa0742640:CDS
TGAGTCATATCTGATGATTC+AGG 0.344543 5_1:-62605576 None:intergenic
TCCTCCGGCTCACTAGCCTT+TGG 0.345311 5_1:-62598897 None:intergenic
GGCTTAGGAGCAGGTTTCTC+AGG 0.352013 5_1:-62598870 None:intergenic
TTAGAATTCTAATATCATAA+TGG 0.357718 5_1:+62605271 Msa0742640:three_prime_UTR
ATTCTTCCTGAAGTAATAAT+GGG 0.381796 5_1:+62605486 Msa0742640:three_prime_UTR
TATGACAAGGCTTCGGAAAC+GGG 0.382455 5_1:+62599112 Msa0742640:exon
GGCTCACTAGCCTTTGGGGC+TGG 0.385354 5_1:-62598891 None:intergenic
GTTGGAGAGCTTTGTGGAGC+AGG 0.388293 5_1:-62598966 None:intergenic
GGCTCAGTTGGAGAGCTTTG+TGG 0.393131 5_1:-62598972 None:intergenic
TTACATATCAACTTCATTGA+AGG 0.400847 5_1:-62599183 None:intergenic
GTGAGCCGTCCCGCGGTTGT+TGG 0.403007 5_1:+62605070 Msa0742640:CDS
TTTGGGGCTGGCTTAGGAGC+AGG 0.406888 5_1:-62598879 None:intergenic
ACTCGTCTTTCTCTTTCCTT+AGG 0.413435 5_1:-62599005 None:intergenic
CGTTTCCGAAGCCTTGTCAT+AGG 0.415332 5_1:-62599110 None:intergenic
TATGACCATAGAATCATTGA+TGG 0.416138 5_1:+62605136 Msa0742640:CDS
CTATGACAAGGCTTCGGAAA+CGG 0.424020 5_1:+62599111 Msa0742640:exon
GGGTGTTGTTTAAACATGTT+GGG 0.427216 5_1:-62605555 None:intergenic
TAGAATTCTAATATCATAAT+GGG 0.431216 5_1:+62605272 Msa0742640:three_prime_UTR
CTTTATTGAGCAAAGCTCTT+GGG 0.434895 5_1:+62605338 Msa0742640:three_prime_UTR
ATTGTCAATGCAGTCATTGA+TGG 0.439850 5_1:+62604001 Msa0742640:CDS
GCAATGTACATCAGTGGCCT+TGG 0.441430 5_1:-62605106 None:intergenic
CATCAGATATGACTCATGTA+AGG 0.442887 5_1:+62605583 Msa0742640:three_prime_UTR
AAATTCAAGGCCCAAACAAA+AGG 0.444465 5_1:-62605298 None:intergenic
GAAAAGCATGGAGTCAAATT+GGG 0.444613 5_1:+62603836 Msa0742640:CDS
TTAGGAGCTTTCTTCTCCTC+CGG 0.446856 5_1:-62598912 None:intergenic
TTGTTTGGGCCTTGAATTTG+CGG 0.453235 5_1:+62605302 Msa0742640:three_prime_UTR
CCCTATTATCAACCCACCTC+AGG 0.456935 5_1:+62604619 Msa0742640:CDS
CTCCGGCTCACTAGCCTTTG+GGG 0.458282 5_1:-62598895 None:intergenic
TCTTTATTGAGCAAAGCTCT+TGG 0.458566 5_1:+62605337 Msa0742640:three_prime_UTR
AGGGTGTTGTTTAAACATGT+TGG 0.462098 5_1:-62605556 None:intergenic
TAAATCACACCGCAAATTCA+AGG 0.466222 5_1:-62605311 None:intergenic
TCAATGACTGCATTGACAAT+TGG 0.470669 5_1:-62603998 None:intergenic
AGCCGTCCCGCGGTTGTTGG+AGG 0.472187 5_1:+62605073 Msa0742640:CDS
CGCAACAGTATCCCCTTCAT+TGG 0.474947 5_1:-62598775 None:intergenic
ACAACTACGATGCATATTAT+GGG 0.475936 5_1:+62605463 Msa0742640:three_prime_UTR
GTTGTTTCATACAATTTATG+AGG 0.479445 5_1:-62605445 None:intergenic
ATCACACCTGACTCAGGACT+TGG 0.485461 5_1:-62598623 None:intergenic
AGCCCCAAAGGCTAGTGAGC+CGG 0.486831 5_1:+62598893 Msa0742640:five_prime_UTR
TGCGGATAAAATGAACTTTG+CGG 0.492760 5_1:+62604472 Msa0742640:CDS
GGAGGAAGCTGTGGCTCAGT+TGG 0.493329 5_1:-62598984 None:intergenic
CGTCTTTCTCTTTCCTTAGG+AGG 0.498109 5_1:-62599002 None:intergenic
TTGTCAATGCAGTCATTGAT+GGG 0.499810 5_1:+62604002 Msa0742640:CDS
TGATATTGTAAGAGTGCCTC+CGG 0.502549 5_1:-62604564 None:intergenic
AGGTTCCTATGACAAGGCTT+CGG 0.505128 5_1:+62599105 Msa0742640:intron
TTTGCAAAGAAGGCTAATGC+TGG 0.505721 5_1:+62604518 Msa0742640:CDS
AACTTTATCAATTGATGAGA+TGG 0.507014 5_1:+62604541 Msa0742640:CDS
GGCACTCTTACAATATCAAA+TGG 0.507367 5_1:+62604569 Msa0742640:CDS
TTCTCAGGTGCAGTCTCAGA+TGG 0.513900 5_1:-62598855 None:intergenic
ACAAGATAGCAATCATTTCA+AGG 0.513907 5_1:+62598805 Msa0742640:five_prime_UTR
ATTGATATCAGCATAGCTGT+TGG 0.518591 5_1:+62604049 Msa0742640:CDS
GAAGCTCCGTGCTGATCATA+AGG 0.519265 5_1:+62603802 Msa0742640:CDS
TGAGCCACAGCTTCCTCCTA+AGG 0.520051 5_1:+62598989 Msa0742640:five_prime_UTR
GTGCAGCTTCTAGCCAATGA+AGG 0.523506 5_1:+62598762 Msa0742640:intron
TTATCCGCATTTCGGATGAC+AGG 0.524831 5_1:-62604458 None:intergenic
ACGGGTTGCTCAACGGTTGA+AGG 0.526760 5_1:+62599130 Msa0742640:CDS
TCAAATTGGGACTTATGTCT+GGG 0.531187 5_1:+62603849 Msa0742640:CDS
CAGAACATGCAAACCTGAGG+TGG 0.531376 5_1:-62604632 None:intergenic
GATGTTCCAAGTCCTGAGTC+AGG 0.534338 5_1:+62598617 Msa0742640:five_prime_UTR
GAAGGGGATACTGTTGCGCC+AGG 0.534623 5_1:+62598780 Msa0742640:five_prime_UTR
GAGTCATATCTGATGATTCA+GGG 0.535333 5_1:-62605575 None:intergenic
TTGGAGGAAATGTTGTTCCA+AGG 0.547451 5_1:+62605089 Msa0742640:CDS
TTATCAATTGATGAGATGGC+CGG 0.550379 5_1:+62604545 Msa0742640:CDS
TGCTCCTAAGCCAGCCCCAA+AGG 0.557645 5_1:+62598881 Msa0742640:five_prime_UTR
TTCAGGATCACACCTGACTC+AGG 0.562746 5_1:-62598629 None:intergenic
AATTCAAGGCCCAAACAAAA+GGG 0.563782 5_1:-62605297 None:intergenic
TGCAGCTTCTAGCCAATGAA+GGG 0.566756 5_1:+62598763 Msa0742640:intron
CCCAAAGGCTAGTGAGCCGG+AGG 0.568181 5_1:+62598896 Msa0742640:five_prime_UTR
ATGATTGCTATCTTGTTACC+TGG 0.569069 5_1:-62598798 None:intergenic
CTTTCCTTAGGAGGAAGCTG+TGG 0.571886 5_1:-62598993 None:intergenic
TTCGGAAACGGGTTGCTCAA+CGG 0.579901 5_1:+62599123 Msa0742640:CDS
ATCAGATATGACTCATGTAA+GGG 0.580858 5_1:+62605584 Msa0742640:three_prime_UTR
TTCAATTGTGAGCCGTCCCG+CGG 0.584894 5_1:+62605063 Msa0742640:CDS
ACCTATCCCTCTAAAACTAG+AGG 0.587473 5_1:+62605409 Msa0742640:three_prime_UTR
CATAGCTGTTGGAACTCCGA+AGG 0.588524 5_1:+62604060 Msa0742640:CDS
ATACCGTGGAGGACCCTCGC+AGG 0.593381 5_1:+62605194 Msa0742640:CDS
TTCCTCCAACAACCGCGGGA+CGG 0.594469 5_1:-62605075 None:intergenic
GATGCTTTCGTTGAAAAGCA+TGG 0.597642 5_1:+62603824 Msa0742640:CDS
AATGTAACGAAACCATGGCA+TGG 0.600925 5_1:+62605612 Msa0742640:three_prime_UTR
AACATTTCCTCCAACAACCG+CGG 0.602311 5_1:-62605080 None:intergenic
ACATATAAAGTGAATCTGAA+AGG 0.605495 5_1:+62605227 Msa0742640:exon
CAGTCTCAGATGGTGCAACG+TGG 0.608587 5_1:-62598845 None:intergenic
CCTATCCCTCTAAAACTAGA+GGG 0.617927 5_1:+62605410 Msa0742640:three_prime_UTR
TAGAATCATTGATGGAAGAG+AGG 0.619261 5_1:+62605144 Msa0742640:CDS
ACATTTCCTCCAACAACCGC+GGG 0.622555 5_1:-62605079 None:intergenic
CTGAGGTGGGTTGATAATAG+GGG 0.623105 5_1:-62604618 None:intergenic
TGAGTCAGGTGTGATCCTGA+AGG 0.632483 5_1:+62598631 Msa0742640:five_prime_UTR
TCAATTGATGAGATGGCCGG+AGG 0.637833 5_1:+62604548 Msa0742640:CDS
ATGTCGAGCAAAAGCCTGCG+AGG 0.639988 5_1:-62605208 None:intergenic
GTGTTAATGTAACGAAACCA+TGG 0.646250 5_1:+62605607 Msa0742640:three_prime_UTR
TCAGATATGACTCATGTAAG+GGG 0.652323 5_1:+62605585 Msa0742640:three_prime_UTR
GTTAGAGCAATGTACATCAG+TGG 0.653334 5_1:-62605112 None:intergenic
AGAACATGCAAACCTGAGGT+GGG 0.654926 5_1:-62604631 None:intergenic
TGTCGAGCAAAAGCCTGCGA+GGG 0.657173 5_1:-62605207 None:intergenic
AAGCCTGCGAGGGTCCTCCA+CGG 0.659181 5_1:-62605197 None:intergenic
ACTCTTACAATATCAAATGG+TGG 0.666602 5_1:+62604572 Msa0742640:CDS
AAGCATCCTTATGATCAGCA+CGG 0.679212 5_1:-62603808 None:intergenic
AGTCTCAGATGGTGCAACGT+GGG 0.682584 5_1:-62598844 None:intergenic
GAGACGGATCAAAGATACCG+TGG 0.687859 5_1:+62605180 Msa0742640:CDS
GCAGCTTCTAGCCAATGAAG+GGG 0.691382 5_1:+62598764 Msa0742640:intron
TGTGCCTGTCATCCGAAATG+CGG 0.724515 5_1:+62604454 Msa0742640:CDS
TGTCAATGCAGTCATTGATG+GGG 0.732167 5_1:+62604003 Msa0742640:CDS
ACGGATCAAAGATACCGTGG+AGG 0.738229 5_1:+62605183 Msa0742640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATGATAATAAACAAA+TGG - chr5_1:62603689-62603708 None:intergenic 10.0%
!! ATTTGTTTATTATCATTTAT+TGG + chr5_1:62603688-62603707 Msa0742640:intron 10.0%
!!! TAAGCAAAATTTAACATTTT+AGG - chr5_1:62599398-62599417 None:intergenic 15.0%
!!! TTATTTTATAGTACATTCTT+AGG + chr5_1:62604679-62604698 Msa0742640:intron 15.0%
!! TTATGGTAATATTTAATCAT+TGG + chr5_1:62604703-62604722 Msa0742640:intron 15.0%
!! TTAGAATTCTAATATCATAA+TGG + chr5_1:62605271-62605290 Msa0742640:three_prime_UTR 15.0%
!! TAGAATTCTAATATCATAAT+GGG + chr5_1:62605272-62605291 Msa0742640:three_prime_UTR 15.0%
!! TCTACTTTGAATTAGAATAT+CGG + chr5_1:62599455-62599474 Msa0742640:intron 20.0%
!! TTTCTGAACAACAAAAAATA+AGG - chr5_1:62599679-62599698 None:intergenic 20.0%
!! AGACAAAAAAACAAAATCAA+TGG - chr5_1:62599785-62599804 None:intergenic 20.0%
!!! ATTGATTTTGTTTTTTTGTC+TGG + chr5_1:62599784-62599803 Msa0742640:intron 20.0%
!!! TTGATTTTGTTTTTTTGTCT+GGG + chr5_1:62599785-62599804 Msa0742640:intron 20.0%
!! GTAATTATGTATTTAGTCAA+TGG - chr5_1:62599952-62599971 None:intergenic 20.0%
!!! CATAACATAAAAAACCTTTT+TGG + chr5_1:62601039-62601058 Msa0742640:intron 20.0%
!! AAAAATGTCACAAATTATTG+TGG - chr5_1:62602163-62602182 None:intergenic 20.0%
!! ATCTCAATTTCATAAGAAAT+TGG + chr5_1:62602719-62602738 Msa0742640:intron 20.0%
!! CATTGTTTATAAAGATTTGT+CGG - chr5_1:62602794-62602813 None:intergenic 20.0%
!! GTAATTATGTATTTAGTCAA+TGG - chr5_1:62599952-62599971 None:intergenic 20.0%
!! ATTGATCTGCAATTTATAAT+AGG + chr5_1:62603768-62603787 Msa0742640:intron 20.0%
!! TATTCAATGAATTCGAAAAT+TGG - chr5_1:62604152-62604171 None:intergenic 20.0%
!!! TTTTTTCTTATAATAGTGAC+CGG + chr5_1:62604236-62604255 Msa0742640:intron 20.0%
!! TCTTATTATGTAGAAAATCA+CGG + chr5_1:62604270-62604289 Msa0742640:intron 20.0%
!!! TTACTGGTTTGAAATTTTTA+AGG + chr5_1:62604366-62604385 Msa0742640:intron 20.0%
!!! TAACTTTAGAATTCATGTGA+TGG - chr5_1:62598696-62598715 None:intergenic 25.0%
! TTACATATCAACTTCATTGA+AGG - chr5_1:62599186-62599205 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG + chr5_1:62599334-62599353 Msa0742640:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5_1:62599373-62599392 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+TGG + chr5_1:62599408-62599427 Msa0742640:intron 25.0%
!!! TTTTTGTTGTTCAGAAAAAG+TGG + chr5_1:62599682-62599701 Msa0742640:intron 25.0%
!!! TTTTGTTGTTCAGAAAAAGT+GGG + chr5_1:62599683-62599702 Msa0742640:intron 25.0%
! AAACTTATTCTACTCAATCA+TGG + chr5_1:62599753-62599772 Msa0742640:intron 25.0%
! AACTTATTCTACTCAATCAT+GGG + chr5_1:62599754-62599773 Msa0742640:intron 25.0%
! TGTTAAACTCAGAGAAAATA+GGG + chr5_1:62599846-62599865 Msa0742640:intron 25.0%
! TACAATAATGTAGAATATGC+TGG + chr5_1:62599985-62600004 Msa0742640:intron 25.0%
!! AAGTTTAAAACAACACTACT+TGG - chr5_1:62600210-62600229 None:intergenic 25.0%
!!! TTTAGTTTGCAAACAGTATT+AGG + chr5_1:62600276-62600295 Msa0742640:intron 25.0%
! TAATGTAAACTTCTTCTTTG+AGG + chr5_1:62600325-62600344 Msa0742640:intron 25.0%
! AATATAAAGATTCGTTCAGA+TGG - chr5_1:62600537-62600556 None:intergenic 25.0%
! TATTCCTTCTTCATATAAAC+AGG - chr5_1:62600685-62600704 None:intergenic 25.0%
! TGTTTATATGAAGAAGGAAT+AGG + chr5_1:62600684-62600703 Msa0742640:intron 25.0%
!!! TTATTTCCAAATAGTTCTGA+AGG - chr5_1:62600906-62600925 None:intergenic 25.0%
! TCAGAACTATTTGGAAATAA+TGG + chr5_1:62600906-62600925 Msa0742640:intron 25.0%
! AAATAATGGCAAAACAGATT+TGG + chr5_1:62600920-62600939 Msa0742640:intron 25.0%
!! AACATAAAAAACCTTTTTGG+TGG + chr5_1:62601042-62601061 Msa0742640:intron 25.0%
!!! ACATAAAAAACCTTTTTGGT+GGG + chr5_1:62601043-62601062 Msa0742640:intron 25.0%
!! TCATTGTTTAAAACATGAGA+AGG + chr5_1:62601212-62601231 Msa0742640:intron 25.0%
! AAAATGGCATATTATCTCAA+AGG - chr5_1:62601391-62601410 None:intergenic 25.0%
! TTTATTTCAAGAATTCTTGC+AGG - chr5_1:62601414-62601433 None:intergenic 25.0%
!! AAATTTTACGTTCTGACAAT+GGG - chr5_1:62601454-62601473 None:intergenic 25.0%
!! AAAATTTTACGTTCTGACAA+TGG - chr5_1:62601455-62601474 None:intergenic 25.0%
! TATGATTCACAGTGATTTAT+GGG - chr5_1:62601642-62601661 None:intergenic 25.0%
! ATATGATTCACAGTGATTTA+TGG - chr5_1:62601643-62601662 None:intergenic 25.0%
! TTTACGTTTGATTGATGAAT+TGG + chr5_1:62601674-62601693 Msa0742640:intron 25.0%
! TTTGATTGATGAATTGGAAA+GGG + chr5_1:62601680-62601699 Msa0742640:intron 25.0%
! CTTCATGATTTAATAAAGTC+AGG - chr5_1:62601791-62601810 None:intergenic 25.0%
!! CAATTGTTAGTTTCCAATTA+TGG - chr5_1:62601847-62601866 None:intergenic 25.0%
! GCAGAATTACAAGAAATAAA+AGG + chr5_1:62601866-62601885 Msa0742640:intron 25.0%
! AAAGTTGAATTCTCAAATTC+TGG - chr5_1:62601995-62602014 None:intergenic 25.0%
!! AAATTGAGATCTGATTTTGA+GGG - chr5_1:62602709-62602728 None:intergenic 25.0%
! CAAATCTTTATAAACAATGC+CGG + chr5_1:62602795-62602814 Msa0742640:intron 25.0%
! TTCTCATTTCATGAATCTTT+GGG - chr5_1:62602830-62602849 None:intergenic 25.0%
! ATTCTCATTTCATGAATCTT+TGG - chr5_1:62602831-62602850 None:intergenic 25.0%
!!! TGAAATTTCAGTTTTTCAAC+AGG - chr5_1:62602878-62602897 None:intergenic 25.0%
!! TATTTTCTCTGAGTTTAACA+TGG - chr5_1:62599846-62599865 None:intergenic 25.0%
! ATGTTAAACTCAGAGAAAAT+AGG + chr5_1:62603393-62603412 Msa0742640:intron 25.0%
! TGTTAAACTCAGAGAAAATA+GGG + chr5_1:62599846-62599865 Msa0742640:intron 25.0%
! TACAATAATGTAGAATATGC+TGG + chr5_1:62599985-62600004 Msa0742640:intron 25.0%
!!! ATTATTCATTAGTGCTGATT+TGG - chr5_1:62603616-62603635 None:intergenic 25.0%
! TATAAATTGCAGATCAATCA+GGG - chr5_1:62603766-62603785 None:intergenic 25.0%
! TTATAAATTGCAGATCAATC+AGG - chr5_1:62603767-62603786 None:intergenic 25.0%
! CAAAGTATGTTCTCAAATTA+TGG + chr5_1:62603877-62603896 Msa0742640:intron 25.0%
!! TGTACTTACTTTGATCTTTT+TGG + chr5_1:62603945-62603964 Msa0742640:intron 25.0%
!! TTTTTGCTAATTATAGTGAC+CGG - chr5_1:62604128-62604147 None:intergenic 25.0%
! TACATATAAACCAGATACAT+CGG - chr5_1:62604176-62604195 None:intergenic 25.0%
! GTAAATCAATGACATATGTA+TGG - chr5_1:62604329-62604348 None:intergenic 25.0%
!!! TGGTTTGAAATTTTTAAGGT+TGG + chr5_1:62604370-62604389 Msa0742640:intron 25.0%
!!! AATTTTTAAGGTTGGATTGA+AGG + chr5_1:62604378-62604397 Msa0742640:intron 25.0%
! AACTTTATCAATTGATGAGA+TGG + chr5_1:62604541-62604560 Msa0742640:CDS 25.0%
! ATAGTACATTCTTAGGTTTA+TGG + chr5_1:62604686-62604705 Msa0742640:intron 25.0%
! TGTCATCAAACATATTTCAT+GGG - chr5_1:62604751-62604770 None:intergenic 25.0%
! TTGTCATCAAACATATTTCA+TGG - chr5_1:62604752-62604771 None:intergenic 25.0%
!!! TCATTTTGATAAGTTACTAG+TGG - chr5_1:62604838-62604857 None:intergenic 25.0%
! AATTATCCAAATCTTACTAC+TGG - chr5_1:62604929-62604948 None:intergenic 25.0%
! ACATATAAAGTGAATCTGAA+AGG + chr5_1:62605227-62605246 Msa0742640:exon 25.0%
!! GTTGTTTCATACAATTTATG+AGG - chr5_1:62605448-62605467 None:intergenic 25.0%
! ATTCTTCCTGAAGTAATAAT+GGG + chr5_1:62605486-62605505 Msa0742640:three_prime_UTR 25.0%
! TTAAATCCCATTATTACTTC+AGG - chr5_1:62605495-62605514 None:intergenic 25.0%
ATCTATTAAACAGTACCTTC+AGG - chr5_1:62598649-62598668 None:intergenic 30.0%
ACAAGATAGCAATCATTTCA+AGG + chr5_1:62598805-62598824 Msa0742640:five_prime_UTR 30.0%
TCTGTTGTAGTTTCAACTTT+AGG - chr5_1:62598933-62598952 None:intergenic 30.0%
ATGAAAATCCCTAAATCTTG+AGG - chr5_1:62599251-62599270 None:intergenic 30.0%
AATTAGAATATCGGAAACTG+TGG + chr5_1:62599464-62599483 Msa0742640:intron 30.0%
ATTAGAATATCGGAAACTGT+GGG + chr5_1:62599465-62599484 Msa0742640:intron 30.0%
!! TTTGTTGTTCAGAAAAAGTG+GGG + chr5_1:62599684-62599703 Msa0742640:intron 30.0%
CTGTTAAACTCAGAGAAAAT+AGG + chr5_1:62599845-62599864 Msa0742640:intron 30.0%
ATGAAAACATTCCAGCAAAA+GGG - chr5_1:62599885-62599904 None:intergenic 30.0%
TATGAAAACATTCCAGCAAA+AGG - chr5_1:62599886-62599905 None:intergenic 30.0%
! TGTGATACTTCTTGTTTATG+TGG - chr5_1:62600124-62600143 None:intergenic 30.0%
! AAACTAAAGCGTTCTTTGTA+TGG - chr5_1:62600264-62600283 None:intergenic 30.0%
CAAACAGTATTAGGTAATGA+GGG + chr5_1:62600285-62600304 Msa0742640:intron 30.0%
GTTTACATTAAACTTCCTAC+TGG - chr5_1:62600315-62600334 None:intergenic 30.0%
AACACAAATTTACTACCAAG+AGG + chr5_1:62600558-62600577 Msa0742640:intron 30.0%
TTCTTCATATAAACAGGCTA+TGG - chr5_1:62600679-62600698 None:intergenic 30.0%
ATAGCCTGTTTATATGAAGA+AGG + chr5_1:62600678-62600697 Msa0742640:intron 30.0%
AAAGTTGCTGTCAAAGATAA+AGG + chr5_1:62600717-62600736 Msa0742640:intron 30.0%
TTAGAATAACCATACTTCTC+TGG + chr5_1:62600741-62600760 Msa0742640:intron 30.0%
AAAACAGATTTGGACATAGA+AGG + chr5_1:62600930-62600949 Msa0742640:intron 30.0%
ACATAGAAGGATGATTATCT+TGG + chr5_1:62600943-62600962 Msa0742640:intron 30.0%
! TCTGTTAAATGTGCTTTTCT+TGG - chr5_1:62601077-62601096 None:intergenic 30.0%
AACATAACAAACACAACCAA+AGG + chr5_1:62601136-62601155 Msa0742640:intron 30.0%
ACGAGTCTAACATTAAAGTA+CGG + chr5_1:62601297-62601316 Msa0742640:intron 30.0%
! AATTTTACGTTCTGACAATG+GGG - chr5_1:62601453-62601472 None:intergenic 30.0%
GAAGAATTTAAAAGCAGTGA+AGG + chr5_1:62601511-62601530 Msa0742640:intron 30.0%
TATTGTGCATGAGATATAAC+AGG + chr5_1:62601608-62601627 Msa0742640:intron 30.0%
ATGATTCACAGTGATTTATG+GGG - chr5_1:62601641-62601660 None:intergenic 30.0%
TCACTGTGAATCATATCAAA+AGG + chr5_1:62601647-62601666 Msa0742640:intron 30.0%
GTTTGATTGATGAATTGGAA+AGG + chr5_1:62601679-62601698 Msa0742640:intron 30.0%
GATTGCAATTCTTGTAAACT+TGG - chr5_1:62601722-62601741 None:intergenic 30.0%
TTAATAAAGTCAGGAGTTCT+TGG - chr5_1:62601782-62601801 None:intergenic 30.0%
! TCATGAAGTACATTTGAGTT+TGG + chr5_1:62601803-62601822 Msa0742640:intron 30.0%
TTGAAAATACATACTGCAGA+TGG - chr5_1:62602136-62602155 None:intergenic 30.0%
! ATCATTTGTTGAACCATTTC+AGG + chr5_1:62602295-62602314 Msa0742640:intron 30.0%
ATTAGGCAAATTCTTATCCA+CGG + chr5_1:62602333-62602352 Msa0742640:intron 30.0%
TTATTAAAGAATGTCCGATC+AGG - chr5_1:62602420-62602439 None:intergenic 30.0%
TCGGACATTCTTTAATAATG+TGG + chr5_1:62602422-62602441 Msa0742640:intron 30.0%
TTCATTAAGACATTCATCCA+AGG + chr5_1:62602645-62602664 Msa0742640:intron 30.0%
! GAAATTGAGATCTGATTTTG+AGG - chr5_1:62602710-62602729 None:intergenic 30.0%
CTGAAATTTCATGTTCAAGT+TGG + chr5_1:62602887-62602906 Msa0742640:intron 30.0%
TGGAATAGTTCTTTCCATTT+AGG + chr5_1:62603169-62603188 Msa0742640:intron 30.0%
AACAAGAAACTAGAGAAACT+AGG + chr5_1:62603270-62603289 Msa0742640:intron 30.0%
TAGAGAAACTAGGAAATCAA+GGG + chr5_1:62603280-62603299 Msa0742640:intron 30.0%
GTTTAACATGGTATCAATCT+AGG - chr5_1:62603382-62603401 None:intergenic 30.0%
ATGAAAACATTCCAGCAAAA+GGG - chr5_1:62599885-62599904 None:intergenic 30.0%
TATGAAAACATTCCAGCAAA+AGG - chr5_1:62599886-62599905 None:intergenic 30.0%
!! TGGTGCTATACTTATTATAC+TGG + chr5_1:62603708-62603727 Msa0742640:intron 30.0%
!! CTTACTTTGATCTTTTTGGT+AGG + chr5_1:62603949-62603968 Msa0742640:intron 30.0%
! AGTTCATTTTATCCGCATTT+CGG - chr5_1:62604469-62604488 None:intergenic 30.0%
!! GATCAATGTTTTTGCAAAGA+AGG + chr5_1:62604508-62604527 Msa0742640:CDS 30.0%
ACTCTTACAATATCAAATGG+TGG + chr5_1:62604572-62604591 Msa0742640:CDS 30.0%
! ATATCAAATGGTGGTGTTTA+TGG + chr5_1:62604581-62604600 Msa0742640:CDS 30.0%
TGCTAAGAAGTCACTTATTA+TGG + chr5_1:62604653-62604672 Msa0742640:intron 30.0%
GTCATCAAACATATTTCATG+GGG - chr5_1:62604750-62604769 None:intergenic 30.0%
! TATGTTTGATGACAAGAAGT+AGG + chr5_1:62604757-62604776 Msa0742640:intron 30.0%
TATGACCATAGAATCATTGA+TGG + chr5_1:62605136-62605155 Msa0742640:CDS 30.0%
AACAACTACGATGCATATTA+TGG + chr5_1:62605462-62605481 Msa0742640:three_prime_UTR 30.0%
ACAACTACGATGCATATTAT+GGG + chr5_1:62605463-62605482 Msa0742640:three_prime_UTR 30.0%
GATTCTTCCTGAAGTAATAA+TGG + chr5_1:62605485-62605504 Msa0742640:three_prime_UTR 30.0%
ATCAGATATGACTCATGTAA+GGG + chr5_1:62605584-62605603 Msa0742640:three_prime_UTR 30.0%
ATGATTGCTATCTTGTTACC+TGG - chr5_1:62598801-62598820 None:intergenic 35.0%
! AATGTCTGCCTTCATTTTCA+AGG + chr5_1:62599085-62599104 Msa0742640:intron 35.0%
CATAGGAACCTTGAAAATGA+AGG - chr5_1:62599096-62599115 None:intergenic 35.0%
!! TTTTCAAGGTTCCTATGACA+AGG + chr5_1:62599099-62599118 Msa0742640:intron 35.0%
! CAGCATAGCAAATGTGTTTT+GGG - chr5_1:62599159-62599178 None:intergenic 35.0%
! TCAGCATAGCAAATGTGTTT+TGG - chr5_1:62599160-62599179 None:intergenic 35.0%
! TGAGTATTGCCTCAAGATTT+AGG + chr5_1:62599239-62599258 Msa0742640:intron 35.0%
! GAGTATTGCCTCAAGATTTA+GGG + chr5_1:62599240-62599259 Msa0742640:intron 35.0%
ATATTTCCTATTACACCCTC+AGG + chr5_1:62599277-62599296 Msa0742640:intron 35.0%
TGCTTATAATAGTGACCTGA+GGG - chr5_1:62599295-62599314 None:intergenic 35.0%
TTGCTTATAATAGTGACCTG+AGG - chr5_1:62599296-62599315 None:intergenic 35.0%
TTGCTTATAATAGTGACTGG+AGG + chr5_1:62599411-62599430 Msa0742640:intron 35.0%
TGCTTATAATAGTGACTGGA+GGG + chr5_1:62599412-62599431 Msa0742640:intron 35.0%
AACTGTGGGCATATTTATTG+TGG + chr5_1:62599479-62599498 Msa0742640:intron 35.0%
!!! TTTGTTTTTTTGTCTGGGTG+AGG + chr5_1:62599790-62599809 Msa0742640:intron 35.0%
!!! TTGTTTTTTTGTCTGGGTGA+GGG + chr5_1:62599791-62599810 Msa0742640:intron 35.0%
AGTTACTCGACATAAGAACT+GGG - chr5_1:62599827-62599846 None:intergenic 35.0%
! AAAACTATGATCCCTTTTGC+TGG + chr5_1:62599871-62599890 Msa0742640:intron 35.0%
TGTAACTGTTATCTACAGCT+AGG + chr5_1:62599926-62599945 Msa0742640:intron 35.0%
TCCAAGATCTTTCATGTGAA+AGG + chr5_1:62600032-62600051 Msa0742640:intron 35.0%
ACCTTTCACATGAAAGATCT+TGG - chr5_1:62600036-62600055 None:intergenic 35.0%
AAGTATCACAATTCCTCTTG+AGG + chr5_1:62600134-62600153 Msa0742640:intron 35.0%
TTTCTACAAAGAACCTCAAG+AGG - chr5_1:62600150-62600169 None:intergenic 35.0%
! AACTTTTCAAACCACACTCT+TGG + chr5_1:62600225-62600244 Msa0742640:intron 35.0%
GCAAACAGTATTAGGTAATG+AGG + chr5_1:62600284-62600303 Msa0742640:intron 35.0%
CTATTGCTGCATCTAAATCT+TGG - chr5_1:62600395-62600414 None:intergenic 35.0%
! AGTTCTCACAGTAGTCATTT+TGG + chr5_1:62600422-62600441 Msa0742640:intron 35.0%
CTTGGGAATAAACAAGAGTT+TGG - chr5_1:62600480-62600499 None:intergenic 35.0%
ACTAGAGGAAAATCAGACAT+GGG - chr5_1:62600613-62600632 None:intergenic 35.0%
! AGCTATAGAAGCTGAACTTT+TGG - chr5_1:62600637-62600656 None:intergenic 35.0%
TGTTCACCTTCAGAACTATT+TGG + chr5_1:62600897-62600916 Msa0742640:intron 35.0%
TTCTTGAAACACGAATCCTA+TGG + chr5_1:62601006-62601025 Msa0742640:intron 35.0%
GTTATGATCCTAATCTCCAT+AGG - chr5_1:62601025-62601044 None:intergenic 35.0%
TTACCAAATAGCCTCAAGAA+GGG + chr5_1:62601185-62601204 Msa0742640:intron 35.0%
TTAAAACATGAGAAGGCAAG+CGG + chr5_1:62601219-62601238 Msa0742640:intron 35.0%
CAAGAATTCTTGCAGGAAAA+TGG - chr5_1:62601407-62601426 None:intergenic 35.0%
! ATTTTACGTTCTGACAATGG+GGG - chr5_1:62601452-62601471 None:intergenic 35.0%
TGAAAACTGAGTCTGAACAA+AGG + chr5_1:62601484-62601503 Msa0742640:intron 35.0%
AATTGAACAGCACTAAGAGA+CGG + chr5_1:62601743-62601762 Msa0742640:intron 35.0%
GAAGACAACAATGAACTAAG+AGG + chr5_1:62601902-62601921 Msa0742640:intron 35.0%
!! AAATTCTGGTTGTTTTGTGC+AGG - chr5_1:62601981-62602000 None:intergenic 35.0%
TGCAACCATTGTCAACTAAT+TGG + chr5_1:62602014-62602033 Msa0742640:intron 35.0%
CTAATTGGCCAACTGAAATA+AGG + chr5_1:62602029-62602048 Msa0742640:intron 35.0%
! ACCAGTAACCTTATTTCAGT+TGG - chr5_1:62602040-62602059 None:intergenic 35.0%
! AATAAGGTTACTGGTTAGAC+CGG + chr5_1:62602045-62602064 Msa0742640:intron 35.0%
AGTTTACCTATCACAGCAAT+CGG - chr5_1:62602109-62602128 None:intergenic 35.0%
TTTAAGAGCAGCAGCATTAT+TGG + chr5_1:62602180-62602199 Msa0742640:intron 35.0%
TCAAAATACCAAGGAGAACT+AGG + chr5_1:62602226-62602245 Msa0742640:intron 35.0%
!! TTTTCTGCTTTAGGTCTTTC+AGG - chr5_1:62602265-62602284 None:intergenic 35.0%
TGAAAGACCTAAAGCAGAAA+AGG + chr5_1:62602264-62602283 Msa0742640:intron 35.0%
AACAACAGAAGTAGAAGAAC+CGG + chr5_1:62602357-62602376 Msa0742640:intron 35.0%
! AAAGCTGTTGCATTTTTCCT+TGG + chr5_1:62602391-62602410 Msa0742640:intron 35.0%
CAGTAGTTGCAAACCTTTAT+AGG + chr5_1:62602457-62602476 Msa0742640:intron 35.0%
TGCAAACCTTTATAGGACAA+TGG + chr5_1:62602464-62602483 Msa0742640:intron 35.0%
GCAAACCTTTATAGGACAAT+GGG + chr5_1:62602465-62602484 Msa0742640:intron 35.0%
TTAAGACATTCATCCAAGGA+AGG + chr5_1:62602649-62602668 Msa0742640:intron 35.0%
TAAGACATTCATCCAAGGAA+GGG + chr5_1:62602650-62602669 Msa0742640:intron 35.0%
!! AAGAAATTGGTCTCGTTTTG+TGG + chr5_1:62602732-62602751 Msa0742640:intron 35.0%
! TATAAAGATTTGTCGGCTGA+GGG - chr5_1:62602787-62602806 None:intergenic 35.0%
! TTATAAAGATTTGTCGGCTG+AGG - chr5_1:62602788-62602807 None:intergenic 35.0%
AATCTTTGGGCTGAATATAC+CGG - chr5_1:62602817-62602836 None:intergenic 35.0%
CTGAGATTGAGGACAATATT+AGG + chr5_1:62602985-62603004 Msa0742640:intron 35.0%
TAACAAAACAACTCACAAGG+AGG - chr5_1:62603073-62603092 None:intergenic 35.0%
!! TCCTTGTGAGTTGTTTTGTT+AGG + chr5_1:62603072-62603091 Msa0742640:intron 35.0%
TCCTAACAAAACAACTCACA+AGG - chr5_1:62603076-62603095 None:intergenic 35.0%
CAGTTAGAGATCTTTGTCAA+AGG - chr5_1:62603138-62603157 None:intergenic 35.0%
CTTTGACAAAGATCTCTAAC+TGG + chr5_1:62603136-62603155 Msa0742640:intron 35.0%
TGGAAAGAACTATTCCACAT+GGG - chr5_1:62603166-62603185 None:intergenic 35.0%
ATGGAAAGAACTATTCCACA+TGG - chr5_1:62603167-62603186 None:intergenic 35.0%
! GTTCTTTTTGTTCGCCTAAA+TGG - chr5_1:62603186-62603205 None:intergenic 35.0%
CTGGAAAAAAAATCACAGCA+GGG + chr5_1:62603237-62603256 Msa0742640:intron 35.0%
TGGAAAAAAAATCACAGCAG+GGG + chr5_1:62603238-62603257 Msa0742640:intron 35.0%
CTAGAGAAACTAGGAAATCA+AGG + chr5_1:62603279-62603298 Msa0742640:intron 35.0%
AGAGAAACTAGGAAATCAAG+GGG + chr5_1:62603281-62603300 Msa0742640:intron 35.0%
AAGGGAACAAAAGAAACTGT+TGG + chr5_1:62603349-62603368 Msa0742640:intron 35.0%
! AAAACTATGATCCCTTTTGC+TGG + chr5_1:62599871-62599890 Msa0742640:intron 35.0%
TGTAACTGTTATCTACAGCT+AGG + chr5_1:62599926-62599945 Msa0742640:intron 35.0%
TGACAGTAACATGATAGACA+AGG + chr5_1:62603656-62603675 Msa0742640:intron 35.0%
GACAGTAACATGATAGACAA+GGG + chr5_1:62603657-62603676 Msa0742640:intron 35.0%
ACAGTAACATGATAGACAAG+GGG + chr5_1:62603658-62603677 Msa0742640:intron 35.0%
! TGAAAAGCATGGAGTCAAAT+TGG + chr5_1:62603835-62603854 Msa0742640:CDS 35.0%
! GAAAAGCATGGAGTCAAATT+GGG + chr5_1:62603836-62603855 Msa0742640:CDS 35.0%
TCAAATTGGGACTTATGTCT+GGG + chr5_1:62603849-62603868 Msa0742640:CDS 35.0%
! TCAATGACTGCATTGACAAT+TGG - chr5_1:62604001-62604020 None:intergenic 35.0%
ATTGTCAATGCAGTCATTGA+TGG + chr5_1:62604001-62604020 Msa0742640:CDS 35.0%
TTGTCAATGCAGTCATTGAT+GGG + chr5_1:62604002-62604021 Msa0742640:CDS 35.0%
ATTGATATCAGCATAGCTGT+TGG + chr5_1:62604049-62604068 Msa0742640:CDS 35.0%
TAGTAAATAAGGGAAGGTTG+AGG - chr5_1:62604099-62604118 None:intergenic 35.0%
AGGGAATAGTAAATAAGGGA+AGG - chr5_1:62604105-62604124 None:intergenic 35.0%
CATTGAATAACCGATGTATC+TGG + chr5_1:62604163-62604182 Msa0742640:intron 35.0%
TTTCTTATAATAGTGACCGG+AGG + chr5_1:62604239-62604258 Msa0742640:intron 35.0%
TTCTTATAATAGTGACCGGA+GGG + chr5_1:62604240-62604259 Msa0742640:intron 35.0%
TAATAAGAACTTACTCCCTC+CGG - chr5_1:62604258-62604277 None:intergenic 35.0%
TATGTAGAAAATCACGGTGT+TGG + chr5_1:62604276-62604295 Msa0742640:intron 35.0%
ATGTAGAAAATCACGGTGTT+GGG + chr5_1:62604277-62604296 Msa0742640:intron 35.0%
TCAATTGACGTTGTCATTAC+TGG + chr5_1:62604350-62604369 Msa0742640:intron 35.0%
TGCGGATAAAATGAACTTTG+CGG + chr5_1:62604472-62604491 Msa0742640:CDS 35.0%
TTATCAATTGATGAGATGGC+CGG + chr5_1:62604545-62604564 Msa0742640:CDS 35.0%
GGCACTCTTACAATATCAAA+TGG + chr5_1:62604569-62604588 Msa0742640:CDS 35.0%
AAAACGCATGAAATTCCAGA+TGG - chr5_1:62604788-62604807 None:intergenic 35.0%
CTTACTACTGGTAAGGAAAA+GGG - chr5_1:62604917-62604936 None:intergenic 35.0%
TCTTACTACTGGTAAGGAAA+AGG - chr5_1:62604918-62604937 None:intergenic 35.0%
TCCTTACCAGTAGTAAGATT+TGG + chr5_1:62604920-62604939 Msa0742640:intron 35.0%
TCCAAATCTTACTACTGGTA+AGG - chr5_1:62604924-62604943 None:intergenic 35.0%
! TCTCATGCAGCTATTGTTTT+TGG + chr5_1:62605017-62605036 Msa0742640:intron 35.0%
CTCTTCCATCAATGATTCTA+TGG - chr5_1:62605144-62605163 None:intergenic 35.0%
TAGAATCATTGATGGAAGAG+AGG + chr5_1:62605144-62605163 Msa0742640:CDS 35.0%
!!! ATAATGGGTACCCTTTTGTT+TGG + chr5_1:62605287-62605306 Msa0742640:three_prime_UTR 35.0%
!! TAATGGGTACCCTTTTGTTT+GGG + chr5_1:62605288-62605307 Msa0742640:three_prime_UTR 35.0%
AATTCAAGGCCCAAACAAAA+GGG - chr5_1:62605300-62605319 None:intergenic 35.0%
AAATTCAAGGCCCAAACAAA+AGG - chr5_1:62605301-62605320 None:intergenic 35.0%
TAAATCACACCGCAAATTCA+AGG - chr5_1:62605314-62605333 None:intergenic 35.0%
TCTTTATTGAGCAAAGCTCT+TGG + chr5_1:62605337-62605356 Msa0742640:three_prime_UTR 35.0%
CTTTATTGAGCAAAGCTCTT+GGG + chr5_1:62605338-62605357 Msa0742640:three_prime_UTR 35.0%
!! TTTTAGAGGGATAGGTGAAA+AGG - chr5_1:62605405-62605424 None:intergenic 35.0%
!! GGGTGTTGTTTAAACATGTT+GGG - chr5_1:62605558-62605577 None:intergenic 35.0%
!! AGGGTGTTGTTTAAACATGT+TGG - chr5_1:62605559-62605578 None:intergenic 35.0%
GAGTCATATCTGATGATTCA+GGG - chr5_1:62605578-62605597 None:intergenic 35.0%
TGAGTCATATCTGATGATTC+AGG - chr5_1:62605579-62605598 None:intergenic 35.0%
CATCAGATATGACTCATGTA+AGG + chr5_1:62605583-62605602 Msa0742640:three_prime_UTR 35.0%
TCAGATATGACTCATGTAAG+GGG + chr5_1:62605585-62605604 Msa0742640:three_prime_UTR 35.0%
GTGTTAATGTAACGAAACCA+TGG + chr5_1:62605607-62605626 Msa0742640:three_prime_UTR 35.0%
! ATGGCTTGTGGGAGTAAAAA+TGG - chr5_1:62598677-62598696 None:intergenic 40.0%
! GAATTCATGTGATGGCTTGT+GGG - chr5_1:62598688-62598707 None:intergenic 40.0%
AGAATTCATGTGATGGCTTG+TGG - chr5_1:62598689-62598708 None:intergenic 40.0%
ACTCGTCTTTCTCTTTCCTT+AGG - chr5_1:62599008-62599027 None:intergenic 40.0%
! TTAGCAATGCACCATTGGTT+TGG - chr5_1:62599560-62599579 None:intergenic 40.0%
AGACATTAGCAATGCACCAT+TGG - chr5_1:62599565-62599584 None:intergenic 40.0%
AATGGTGCATTGCTAATGTC+TGG + chr5_1:62599564-62599583 Msa0742640:intron 40.0%
TACTATGACGTGTAGGACTT+GGG - chr5_1:62599646-62599665 None:intergenic 40.0%
ATACACCTACTATGACGTGT+AGG - chr5_1:62599653-62599672 None:intergenic 40.0%
TTGTTCAGAAAAAGTGGGGA+TGG + chr5_1:62599688-62599707 Msa0742640:intron 40.0%
ATCTGCATACATACGCACTT+GGG + chr5_1:62599712-62599731 Msa0742640:intron 40.0%
CAGTTACTCGACATAAGAAC+TGG - chr5_1:62599828-62599847 None:intergenic 40.0%
!! ATCATAGCTGCTTTGGAGAA+AGG + chr5_1:62600179-62600198 Msa0742640:intron 40.0%
TAAAACAAGCACCAAGAGTG+TGG - chr5_1:62600239-62600258 None:intergenic 40.0%
GTGAAAAATGCCTTTCTCCA+TGG - chr5_1:62600354-62600373 None:intergenic 40.0%
! AGGCATTTTTCACATCTAGC+TGG + chr5_1:62600361-62600380 Msa0742640:intron 40.0%
AGAGTTTGGTCTAGACTATG+AGG - chr5_1:62600466-62600485 None:intergenic 40.0%
! AGGCTAGATTGGTTGTTCTT+GGG - chr5_1:62600497-62600516 None:intergenic 40.0%
! AAGGCTAGATTGGTTGTTCT+TGG - chr5_1:62600498-62600517 None:intergenic 40.0%
TGGATCAATAGATCGCTACA+AGG - chr5_1:62600517-62600536 None:intergenic 40.0%
CACTAGAGGAAAATCAGACA+TGG - chr5_1:62600614-62600633 None:intergenic 40.0%
TATGGAGCATAAATGTTGGC+AGG - chr5_1:62600661-62600680 None:intergenic 40.0%
AGGCTATGGAGCATAAATGT+TGG - chr5_1:62600665-62600684 None:intergenic 40.0%
GAATAACCATACTTCTCTGG+AGG + chr5_1:62600744-62600763 Msa0742640:intron 40.0%
!! ACTGGTTCTGGTTGAAATGT+CGG + chr5_1:62600798-62600817 Msa0742640:intron 40.0%
ATCAGCATCCAGAGAATGAT+CGG + chr5_1:62600821-62600840 Msa0742640:intron 40.0%
ACACGAATCCTATGGAGATT+AGG + chr5_1:62601014-62601033 Msa0742640:intron 40.0%
AACAGATTGAGCTGTGAGTT+TGG + chr5_1:62601091-62601110 Msa0742640:intron 40.0%
TATTCTACTCTTCGCACCTT+TGG - chr5_1:62601155-62601174 None:intergenic 40.0%
GTGCGAAGAGTAGAATAGTT+TGG + chr5_1:62601158-62601177 Msa0742640:intron 40.0%
CGAAGAGTAGAATAGTTTGG+TGG + chr5_1:62601161-62601180 Msa0742640:intron 40.0%
CTTACCAAATAGCCTCAAGA+AGG + chr5_1:62601184-62601203 Msa0742640:intron 40.0%
ACAATGATTCTCCCTTCTTG+AGG - chr5_1:62601199-62601218 None:intergenic 40.0%
GTTAATTAGGTGTACAGCAG+TGG + chr5_1:62601241-62601260 Msa0742640:intron 40.0%
AAATCGCCATCTTCTTGATG+TGG - chr5_1:62601324-62601343 None:intergenic 40.0%
! TTTTACGTTCTGACAATGGG+GGG - chr5_1:62601451-62601470 None:intergenic 40.0%
CGACTATAGTCGTTTCACAT+GGG - chr5_1:62601564-62601583 None:intergenic 40.0%
ACGACTATAGTCGTTTCACA+TGG - chr5_1:62601565-62601584 None:intergenic 40.0%
ATTGAACAGCACTAAGAGAC+GGG + chr5_1:62601744-62601763 Msa0742640:intron 40.0%
CAATTATGGCATAAGCGTCT+TGG - chr5_1:62601833-62601852 None:intergenic 40.0%
CAAGACGCTTATGCCATAAT+TGG + chr5_1:62601831-62601850 Msa0742640:intron 40.0%
GGAAAAAGACGTCCAACTTT+AGG + chr5_1:62601923-62601942 Msa0742640:intron 40.0%
GTTGGCCAATTAGTTGACAA+TGG - chr5_1:62602022-62602041 None:intergenic 40.0%
GCCAACTGAAATAAGGTTAC+TGG + chr5_1:62602036-62602055 Msa0742640:intron 40.0%
! ATAAGGTTACTGGTTAGACC+GGG + chr5_1:62602046-62602065 Msa0742640:intron 40.0%
ACTGATGCTTATGTTTCTCC+CGG - chr5_1:62602067-62602086 None:intergenic 40.0%
ATAAGCATCAGTGAGAGATG+AGG + chr5_1:62602075-62602094 Msa0742640:intron 40.0%
! ATATCACCGATTGCTGTGAT+AGG + chr5_1:62602100-62602119 Msa0742640:intron 40.0%
!!! TCTCCTTGGTATTTTGACTC+CGG - chr5_1:62602223-62602242 None:intergenic 40.0%
!! CTTTTTCACCTAGTTCTCCT+TGG - chr5_1:62602237-62602256 None:intergenic 40.0%
! GTTTCAGCCTTTTCTGCTTT+AGG - chr5_1:62602274-62602293 None:intergenic 40.0%
! TGAACCATTTCAGGTGTCAT+TGG + chr5_1:62602304-62602323 Msa0742640:intron 40.0%
!! TTCTACTTCTGTTGTTTCCG+TGG - chr5_1:62602353-62602372 None:intergenic 40.0%
TGCAACTACTGCAAACAAGA+AGG - chr5_1:62602448-62602467 None:intergenic 40.0%
TGCTTCCCATTGTCCTATAA+AGG - chr5_1:62602473-62602492 None:intergenic 40.0%
!! TGTTTCTGCTGCAAAGGTTT+TGG - chr5_1:62602502-62602521 None:intergenic 40.0%
AACCTTTGCAGCAGAAACAT+TGG + chr5_1:62602503-62602522 Msa0742640:intron 40.0%
!!! GATCTGATTTTGAGGGCATT+CGG - chr5_1:62602702-62602721 None:intergenic 40.0%
TTGTGGTCTCATGAACTGTT+TGG + chr5_1:62602749-62602768 Msa0742640:intron 40.0%
CAAGTTATGGCATGGATCAT+AGG - chr5_1:62603021-62603040 None:intergenic 40.0%
AAGATGCACAAGTTATGGCA+TGG - chr5_1:62603029-62603048 None:intergenic 40.0%
GGTCAAAGATGCACAAGTTA+TGG - chr5_1:62603034-62603053 None:intergenic 40.0%
!! TGAGTTGTTTTGTTAGGAGC+AGG + chr5_1:62603078-62603097 Msa0742640:intron 40.0%
!! GAGTTGTTTTGTTAGGAGCA+GGG + chr5_1:62603079-62603098 Msa0742640:intron 40.0%
AGAGATCTTTGTCAAAGGCA+AGG - chr5_1:62603133-62603152 None:intergenic 40.0%
GCTGGAAAAAAAATCACAGC+AGG + chr5_1:62603236-62603255 Msa0742640:intron 40.0%
GGAAAAAAAATCACAGCAGG+GGG + chr5_1:62603239-62603258 Msa0742640:intron 40.0%
TCAGAGAAAGACACGAAACT+AGG + chr5_1:62603322-62603341 Msa0742640:intron 40.0%
AGACACGAAACTAGGAACAA+AGG + chr5_1:62603330-62603349 Msa0742640:intron 40.0%
GACACGAAACTAGGAACAAA+GGG + chr5_1:62603331-62603350 Msa0742640:intron 40.0%
TAAAGTCTGTGCAAATCTGC+TGG + chr5_1:62603568-62603587 Msa0742640:intron 40.0%
!! CTGATTTGGTGCAGATTTGT+TGG - chr5_1:62603602-62603621 None:intergenic 40.0%
AAGCATCCTTATGATCAGCA+CGG - chr5_1:62603811-62603830 None:intergenic 40.0%
GATGCTTTCGTTGAAAAGCA+TGG + chr5_1:62603824-62603843 Msa0742640:CDS 40.0%
GTCAAATTGGGACTTATGTC+TGG + chr5_1:62603848-62603867 Msa0742640:CDS 40.0%
TGTCAATGCAGTCATTGATG+GGG + chr5_1:62604003-62604022 Msa0742640:CDS 40.0%
AGGTGACTGAAGAAAACCTT+CGG - chr5_1:62604079-62604098 None:intergenic 40.0%
CCGGAGGGAATAGTAAATAA+GGG - chr5_1:62604109-62604128 None:intergenic 40.0%
! CCCTTATTTACTATTCCCTC+CGG + chr5_1:62604106-62604125 Msa0742640:intron 40.0%
ACCGGAGGGAATAGTAAATA+AGG - chr5_1:62604110-62604129 None:intergenic 40.0%
TGCTAATTATAGTGACCGGA+GGG - chr5_1:62604124-62604143 None:intergenic 40.0%
TTGCTAATTATAGTGACCGG+AGG - chr5_1:62604125-62604144 None:intergenic 40.0%
!!! TTTTTTTTGCTTGCCTACCC+AGG + chr5_1:62604424-62604443 Msa0742640:intron 40.0%
!!! TTTTTTTGCTTGCCTACCCA+GGG + chr5_1:62604425-62604444 Msa0742640:intron 40.0%
TTTGCAAAGAAGGCTAATGC+TGG + chr5_1:62604518-62604537 Msa0742640:CDS 40.0%
!! TGATATTGTAAGAGTGCCTC+CGG - chr5_1:62604567-62604586 None:intergenic 40.0%
AAAGGGCGGAATATTTGGAT+AGG - chr5_1:62604900-62604919 None:intergenic 40.0%
AAGGAAAAGGGCGGAATATT+TGG - chr5_1:62604905-62604924 None:intergenic 40.0%
!!! CAGCTATTGTTTTTGGCAGT+CGG + chr5_1:62605024-62605043 Msa0742640:intron 40.0%
TTGGAGGAAATGTTGTTCCA+AGG + chr5_1:62605089-62605108 Msa0742640:CDS 40.0%
GTTAGAGCAATGTACATCAG+TGG - chr5_1:62605115-62605134 None:intergenic 40.0%
!! AGGCAGTGTTCTTTTTGAGA+CGG + chr5_1:62605164-62605183 Msa0742640:CDS 40.0%
TTGTTTGGGCCTTGAATTTG+CGG + chr5_1:62605302-62605321 Msa0742640:three_prime_UTR 40.0%
!! ACCTATCCCTCTAAAACTAG+AGG + chr5_1:62605409-62605428 Msa0742640:three_prime_UTR 40.0%
!! CCTATCCCTCTAAAACTAGA+GGG + chr5_1:62605410-62605429 Msa0742640:three_prime_UTR 40.0%
!!! TGTGACCCTCTAGTTTTAGA+GGG - chr5_1:62605418-62605437 None:intergenic 40.0%
!!! TTGTGACCCTCTAGTTTTAG+AGG - chr5_1:62605419-62605438 None:intergenic 40.0%
AATGTAACGAAACCATGGCA+TGG + chr5_1:62605612-62605631 Msa0742640:three_prime_UTR 40.0%
AAAAATTGGGTTCCATGCCA+TGG - chr5_1:62605627-62605646 None:intergenic 40.0%
TGCAGCTTCTAGCCAATGAA+GGG + chr5_1:62598763-62598782 Msa0742640:intron 45.0%
TTAGGAGCTTTCTTCTCCTC+CGG - chr5_1:62598915-62598934 None:intergenic 45.0%
CGTCTTTCTCTTTCCTTAGG+AGG - chr5_1:62599005-62599024 None:intergenic 45.0%
AGGTTCCTATGACAAGGCTT+CGG + chr5_1:62599105-62599124 Msa0742640:intron 45.0%
CTATGACAAGGCTTCGGAAA+CGG + chr5_1:62599111-62599130 Msa0742640:exon 45.0%
TATGACAAGGCTTCGGAAAC+GGG + chr5_1:62599112-62599131 Msa0742640:exon 45.0%
! TAGTGACCTGAGGGTGTAAT+AGG - chr5_1:62599286-62599305 None:intergenic 45.0%
CTACTATGACGTGTAGGACT+TGG - chr5_1:62599647-62599666 None:intergenic 45.0%
CAAGTCCTACACGTCATAGT+AGG + chr5_1:62599645-62599664 Msa0742640:intron 45.0%
CATCTGCATACATACGCACT+TGG + chr5_1:62599711-62599730 Msa0742640:intron 45.0%
TCTGCATACATACGCACTTG+GGG + chr5_1:62599713-62599732 Msa0742640:intron 45.0%
GAGACGAATCATAGCTGCTT+TGG + chr5_1:62600172-62600191 Msa0742640:intron 45.0%
!! CTTCTTCTTTGAGGTCACCA+TGG + chr5_1:62600334-62600353 Msa0742640:intron 45.0%
! TTTGAGGTCACCATGGAGAA+AGG + chr5_1:62600341-62600360 Msa0742640:intron 45.0%
!! ACAGTAGTCATTTTGGCCAC+AGG + chr5_1:62600429-62600448 Msa0742640:intron 45.0%
AGATCGCTACAAGGCTAGAT+TGG - chr5_1:62600508-62600527 None:intergenic 45.0%
CTACCAAGAGGCTTAACAGA+TGG + chr5_1:62600570-62600589 Msa0742640:intron 45.0%
! AGCTGAACTTTTGGCACTAG+AGG - chr5_1:62600628-62600647 None:intergenic 45.0%
CGTAAACCTCCAGAGAAGTA+TGG - chr5_1:62600753-62600772 None:intergenic 45.0%
TCAGCATCCAGAGAATGATC+GGG + chr5_1:62600822-62600841 Msa0742640:intron 45.0%
CGTCTTTGATAGACCAAGAG+AGG + chr5_1:62600864-62600883 Msa0742640:intron 45.0%
TCTCCCTTCTTGAGGCTATT+TGG - chr5_1:62601191-62601210 None:intergenic 45.0%
GAGAAGGCAAGCGGTTAATT+AGG + chr5_1:62601228-62601247 Msa0742640:intron 45.0%
TAGACTCGTTTATGCCCTCT+CGG - chr5_1:62601286-62601305 None:intergenic 45.0%
TACGGACCACATCAAGAAGA+TGG + chr5_1:62601315-62601334 Msa0742640:intron 45.0%
TTTACGTTCTGACAATGGGG+GGG - chr5_1:62601450-62601469 None:intergenic 45.0%
ACTGAGTCTGAACAAAGGCA+TGG + chr5_1:62601489-62601508 Msa0742640:intron 45.0%
TTGTGCAGGATCAACACTCA+GGG - chr5_1:62601967-62601986 None:intergenic 45.0%
TTTGTGCAGGATCAACACTC+AGG - chr5_1:62601968-62601987 None:intergenic 45.0%
GGTCATATGATTAGATGCCC+CGG + chr5_1:62602201-62602220 Msa0742640:intron 45.0%
!!! TCCTTGGTATTTTGACTCCG+GGG - chr5_1:62602221-62602240 None:intergenic 45.0%
!!! CTCCTTGGTATTTTGACTCC+GGG - chr5_1:62602222-62602241 None:intergenic 45.0%
TGTGCCAATGACACCTGAAA+TGG - chr5_1:62602311-62602330 None:intergenic 45.0%
!! GGTGTCATTGGCACAGAATT+AGG + chr5_1:62602316-62602335 Msa0742640:intron 45.0%
! GCTGTTGCATTTTTCCTTGG+TGG + chr5_1:62602394-62602413 Msa0742640:intron 45.0%
!! TTTTTCCTTGGTGGCCTGAT+CGG + chr5_1:62602403-62602422 Msa0742640:intron 45.0%
! GTCCAATGTTTCTGCTGCAA+AGG - chr5_1:62602508-62602527 None:intergenic 45.0%
TGCATCTTTGACCTCCCATT+TGG + chr5_1:62603041-62603060 Msa0742640:intron 45.0%
!! TGTTTTGTTAGGAGCAGGGT+CGG + chr5_1:62603083-62603102 Msa0742640:intron 45.0%
TGTCAAAGGCAAGGAGCTTT+GGG - chr5_1:62603124-62603143 None:intergenic 45.0%
TTGTCAAAGGCAAGGAGCTT+TGG - chr5_1:62603125-62603144 None:intergenic 45.0%
CTTGTCTGTAGTCGTAGACA+TGG + chr5_1:62603212-62603231 Msa0742640:intron 45.0%
TTATCCGCATTTCGGATGAC+AGG - chr5_1:62604461-62604480 None:intergenic 45.0%
!! CTGAGGTGGGTTGATAATAG+GGG - chr5_1:62604621-62604640 None:intergenic 45.0%
!! CCTGAGGTGGGTTGATAATA+GGG - chr5_1:62604622-62604641 None:intergenic 45.0%
!! ACCTGAGGTGGGTTGATAAT+AGG - chr5_1:62604623-62604642 None:intergenic 45.0%
AGAACATGCAAACCTGAGGT+GGG - chr5_1:62604634-62604653 None:intergenic 45.0%
TAGCAGAACATGCAAACCTG+AGG - chr5_1:62604638-62604657 None:intergenic 45.0%
AAGAAGTAGGACGAACCATC+TGG + chr5_1:62604770-62604789 Msa0742640:intron 45.0%
AGTTACTAGTGGCATGCATC+TGG - chr5_1:62604827-62604846 None:intergenic 45.0%
ACTACTGGTAAGGAAAAGGG+CGG - chr5_1:62604914-62604933 None:intergenic 45.0%
!! TTTTTGGCAGTCGGCAATCT+TGG + chr5_1:62605033-62605052 Msa0742640:intron 45.0%
! TTTTGGCAGTCGGCAATCTT+GGG + chr5_1:62605034-62605053 Msa0742640:intron 45.0%
AACATTTCCTCCAACAACCG+CGG - chr5_1:62605083-62605102 None:intergenic 45.0%
!!! CCCTCTAGTTTTAGAGGGAT+AGG - chr5_1:62605413-62605432 None:intergenic 45.0%
GATGTTCCAAGTCCTGAGTC+AGG + chr5_1:62598617-62598636 Msa0742640:five_prime_UTR 50.0%
ATCACACCTGACTCAGGACT+TGG - chr5_1:62598626-62598645 None:intergenic 50.0%
TTCAGGATCACACCTGACTC+AGG - chr5_1:62598632-62598651 None:intergenic 50.0%
TGAGTCAGGTGTGATCCTGA+AGG + chr5_1:62598631-62598650 Msa0742640:five_prime_UTR 50.0%
GTGCAGCTTCTAGCCAATGA+AGG + chr5_1:62598762-62598781 Msa0742640:intron 50.0%
GCAGCTTCTAGCCAATGAAG+GGG + chr5_1:62598764-62598783 Msa0742640:intron 50.0%
CGCAACAGTATCCCCTTCAT+TGG - chr5_1:62598778-62598797 None:intergenic 50.0%
AGTCTCAGATGGTGCAACGT+GGG - chr5_1:62598847-62598866 None:intergenic 50.0%
TTCTCAGGTGCAGTCTCAGA+TGG - chr5_1:62598858-62598877 None:intergenic 50.0%
CTTTGTGGAGCAGGTGCTTT+AGG - chr5_1:62598960-62598979 None:intergenic 50.0%
CTTTCCTTAGGAGGAAGCTG+TGG - chr5_1:62598996-62599015 None:intergenic 50.0%
! CGTTTCCGAAGCCTTGTCAT+AGG - chr5_1:62599113-62599132 None:intergenic 50.0%
!! TTCGGAAACGGGTTGCTCAA+CGG + chr5_1:62599123-62599142 Msa0742640:CDS 50.0%
GTTTGGCAGGCGCATCATAT+GGG - chr5_1:62599543-62599562 None:intergenic 50.0%
!! CAATGCACCATTGGTTTGGC+AGG - chr5_1:62599556-62599575 None:intergenic 50.0%
!! CATCACTGGCTCAGATCAAG+AGG - chr5_1:62600091-62600110 None:intergenic 50.0%
GTGGACGACATTGTCATCAC+TGG - chr5_1:62600105-62600124 None:intergenic 50.0%
! GGTAATGAGGGCATACCAGT+AGG + chr5_1:62600297-62600316 Msa0742640:intron 50.0%
CCTCCATCTGTTAAGCCTCT+TGG - chr5_1:62600576-62600595 None:intergenic 50.0%
CCAAGAGGCTTAACAGATGG+AGG + chr5_1:62600573-62600592 Msa0742640:intron 50.0%
GGCTTAACAGATGGAGGACA+TGG + chr5_1:62600579-62600598 Msa0742640:intron 50.0%
ACAAACGCGTCAACCTCTCT+TGG - chr5_1:62600880-62600899 None:intergenic 50.0%
!! GTGAGTTTGGTGCGTTCTTG+TGG + chr5_1:62601104-62601123 Msa0742640:intron 50.0%
!! AGTTTGGTGCGTTCTTGTGG+TGG + chr5_1:62601107-62601126 Msa0742640:intron 50.0%
TGCTTCACACCAAAACCGAG+AGG + chr5_1:62601268-62601287 Msa0742640:intron 50.0%
GCTTCACACCAAAACCGAGA+GGG + chr5_1:62601269-62601288 Msa0742640:intron 50.0%
! CGTTTATGCCCTCTCGGTTT+TGG - chr5_1:62601280-62601299 None:intergenic 50.0%
! TTTCCGCTACCCCGTTTTGT+TGG + chr5_1:62601348-62601367 Msa0742640:intron 50.0%
!! TTCCGCTACCCCGTTTTGTT+GGG + chr5_1:62601349-62601368 Msa0742640:intron 50.0%
TTCCACACCCCAACAAAACG+GGG - chr5_1:62601360-62601379 None:intergenic 50.0%
CTTCCACACCCCAACAAAAC+GGG - chr5_1:62601361-62601380 None:intergenic 50.0%
CCTTCCACACCCCAACAAAA+CGG - chr5_1:62601362-62601381 None:intergenic 50.0%
TCAGGGAAGATGATCGCGAA+GGG - chr5_1:62601950-62601969 None:intergenic 50.0%
AGAAGTAGAAGAACCGGCAG+AGG + chr5_1:62602363-62602382 Msa0742640:intron 50.0%
TTACTCATGTCACGCCCTCT+AGG + chr5_1:62602529-62602548 Msa0742640:intron 50.0%
GAAATCTGCTTCCCTTCCTG+TGG - chr5_1:62602575-62602594 None:intergenic 50.0%
! CAAGGAGGCACATGCCAAAT+GGG - chr5_1:62603058-62603077 None:intergenic 50.0%
! ACAAGGAGGCACATGCCAAA+TGG - chr5_1:62603059-62603078 None:intergenic 50.0%
!! GAGCTTTGGGGTCATGTTGA+CGG - chr5_1:62603111-62603130 None:intergenic 50.0%
GTCAAAGGCAAGGAGCTTTG+GGG - chr5_1:62603123-62603142 None:intergenic 50.0%
CTCTAACTGGAATGCCCATG+TGG + chr5_1:62603149-62603168 Msa0742640:intron 50.0%
TGTAGTCGTAGACATGGTGC+TGG + chr5_1:62603218-62603237 Msa0742640:intron 50.0%
! GAAGCTCCGTGCTGATCATA+AGG + chr5_1:62603802-62603821 Msa0742640:CDS 50.0%
CATAGCTGTTGGAACTCCGA+AGG + chr5_1:62604060-62604079 Msa0742640:CDS 50.0%
TGTGCCTGTCATCCGAAATG+CGG + chr5_1:62604454-62604473 Msa0742640:CDS 50.0%
TCAATTGATGAGATGGCCGG+AGG + chr5_1:62604548-62604567 Msa0742640:CDS 50.0%
CCCTATTATCAACCCACCTC+AGG + chr5_1:62604619-62604638 Msa0742640:CDS 50.0%
CAGAACATGCAAACCTGAGG+TGG - chr5_1:62604635-62604654 None:intergenic 50.0%
ACATTTCCTCCAACAACCGC+GGG - chr5_1:62605082-62605101 None:intergenic 50.0%
GCAATGTACATCAGTGGCCT+TGG - chr5_1:62605109-62605128 None:intergenic 50.0%
GAGACGGATCAAAGATACCG+TGG + chr5_1:62605180-62605199 Msa0742640:CDS 50.0%
ACGGATCAAAGATACCGTGG+AGG + chr5_1:62605183-62605202 Msa0742640:CDS 50.0%
CAGTCTCAGATGGTGCAACG+TGG - chr5_1:62598848-62598867 None:intergenic 55.0%
GGCTTAGGAGCAGGTTTCTC+AGG - chr5_1:62598873-62598892 None:intergenic 55.0%
! GTTGGAGAGCTTTGTGGAGC+AGG - chr5_1:62598969-62598988 None:intergenic 55.0%
GGCTCAGTTGGAGAGCTTTG+TGG - chr5_1:62598975-62598994 None:intergenic 55.0%
TGAGCCACAGCTTCCTCCTA+AGG + chr5_1:62598989-62599008 Msa0742640:five_prime_UTR 55.0%
! ACGGGTTGCTCAACGGTTGA+AGG + chr5_1:62599130-62599149 Msa0742640:CDS 55.0%
GGTTTGGCAGGCGCATCATA+TGG - chr5_1:62599544-62599563 None:intergenic 55.0%
TGATGCGCCTGCCAAACCAA+TGG + chr5_1:62599546-62599565 Msa0742640:intron 55.0%
!! CATTTTGGCCACAGGTGCGA+AGG + chr5_1:62600437-62600456 Msa0742640:intron 55.0%
! ATCGCGAGTACTGCGACGTA+AGG + chr5_1:62600773-62600792 Msa0742640:intron 55.0%
! TCGCGAGTACTGCGACGTAA+GGG + chr5_1:62600774-62600793 Msa0742640:intron 55.0%
GTACTGCGACGTAAGGGAAC+TGG + chr5_1:62600780-62600799 Msa0742640:intron 55.0%
! CGACGTAAGGGAACTGGTTC+TGG + chr5_1:62600786-62600805 Msa0742640:intron 55.0%
GCATCCAGAGAATGATCGGG+AGG + chr5_1:62600825-62600844 Msa0742640:intron 55.0%
TCCAGAGAATGATCGGGAGG+CGG + chr5_1:62600828-62600847 Msa0742640:intron 55.0%
GGCTACTCAGCCCACCAAAA+AGG - chr5_1:62601056-62601075 None:intergenic 55.0%
!! TCCGCTACCCCGTTTTGTTG+GGG + chr5_1:62601350-62601369 Msa0742640:intron 55.0%
ACCCCAACAAAACGGGGTAG+CGG - chr5_1:62601354-62601373 None:intergenic 55.0%
!! TACCCCGTTTTGTTGGGGTG+TGG + chr5_1:62601355-62601374 Msa0742640:intron 55.0%
!! CCGTTTTGTTGGGGTGTGGA+AGG + chr5_1:62601359-62601378 Msa0742640:intron 55.0%
ATCGCGAAGGGGCCTAAAGT+TGG - chr5_1:62601938-62601957 None:intergenic 55.0%
CAGGGAAGATGATCGCGAAG+GGG - chr5_1:62601949-62601968 None:intergenic 55.0%
CTCAGGGAAGATGATCGCGA+AGG - chr5_1:62601951-62601970 None:intergenic 55.0%
GCCCCGGAGTCAAAATACCA+AGG + chr5_1:62602217-62602236 Msa0742640:intron 55.0%
ACAGCTTTCAGTGCCTCTGC+CGG - chr5_1:62602379-62602398 None:intergenic 55.0%
AATGTCCGATCAGGCCACCA+AGG - chr5_1:62602411-62602430 None:intergenic 55.0%
CTGCGCAAGGAAGACCTAGA+GGG - chr5_1:62602546-62602565 None:intergenic 55.0%
CAGAGCTACTGTCCCTTCCT+TGG - chr5_1:62602665-62602684 None:intergenic 55.0%
! ACCTGCGAGCACTGTTGTTC+TGG + chr5_1:62602911-62602930 Msa0742640:intron 55.0%
TTCCCACATCTTAGCTGCCG+TGG + chr5_1:62602954-62602973 Msa0742640:intron 55.0%
ATCTTAGCTGCCGTGGCGAA+GGG + chr5_1:62602961-62602980 Msa0742640:intron 55.0%
CAATCTCAGACCCTTCGCCA+CGG - chr5_1:62602974-62602993 None:intergenic 55.0%
! TGGCGAAGGGTCTGAGATTG+AGG + chr5_1:62602974-62602993 Msa0742640:intron 55.0%
GACAGGCACAACAAGTCCCT+GGG - chr5_1:62604444-62604463 None:intergenic 55.0%
TGACAGGCACAACAAGTCCC+TGG - chr5_1:62604445-62604464 None:intergenic 55.0%
TTCAATTGTGAGCCGTCCCG+CGG + chr5_1:62605063-62605082 Msa0742640:CDS 55.0%
TGTCGAGCAAAAGCCTGCGA+GGG - chr5_1:62605210-62605229 None:intergenic 55.0%
ATGTCGAGCAAAAGCCTGCG+AGG - chr5_1:62605211-62605230 None:intergenic 55.0%
GAAGGGGATACTGTTGCGCC+AGG + chr5_1:62598780-62598799 Msa0742640:five_prime_UTR 60.0%
!! TTTGGGGCTGGCTTAGGAGC+AGG - chr5_1:62598882-62598901 None:intergenic 60.0%
TGCTCCTAAGCCAGCCCCAA+AGG + chr5_1:62598881-62598900 Msa0742640:five_prime_UTR 60.0%
!! CTAGCCTTTGGGGCTGGCTT+AGG - chr5_1:62598888-62598907 None:intergenic 60.0%
AGCCCCAAAGGCTAGTGAGC+CGG + chr5_1:62598893-62598912 Msa0742640:five_prime_UTR 60.0%
!! CTCCGGCTCACTAGCCTTTG+GGG - chr5_1:62598898-62598917 None:intergenic 60.0%
!! CCTCCGGCTCACTAGCCTTT+GGG - chr5_1:62598899-62598918 None:intergenic 60.0%
!! TCCTCCGGCTCACTAGCCTT+TGG - chr5_1:62598900-62598919 None:intergenic 60.0%
GGAGGAAGCTGTGGCTCAGT+TGG - chr5_1:62598987-62599006 None:intergenic 60.0%
TGAGGAGACCTTCGCACCTG+TGG - chr5_1:62600448-62600467 None:intergenic 60.0%
ACCGCCTCCCGATCATTCTC+TGG - chr5_1:62600832-62600851 None:intergenic 60.0%
AGAGAATGATCGGGAGGCGG+TGG + chr5_1:62600831-62600850 Msa0742640:intron 60.0%
GCTGCGCAAGGAAGACCTAG+AGG - chr5_1:62602547-62602566 None:intergenic 60.0%
CGCAGCATACGCCACAGGAA+GGG + chr5_1:62602561-62602580 Msa0742640:intron 60.0%
GCCAGAACAACAGTGCTCGC+AGG - chr5_1:62602915-62602934 None:intergenic 60.0%
CGCCACGGCAGCTAAGATGT+GGG - chr5_1:62602959-62602978 None:intergenic 60.0%
TCGCCACGGCAGCTAAGATG+TGG - chr5_1:62602960-62602979 None:intergenic 60.0%
CATCTTAGCTGCCGTGGCGA+AGG + chr5_1:62602960-62602979 Msa0742640:intron 60.0%
! GGAGGCACATGCCAAATGGG+AGG - chr5_1:62603055-62603074 None:intergenic 60.0%
GGCACAACAAGTCCCTGGGT+AGG - chr5_1:62604440-62604459 None:intergenic 60.0%
TTCCTCCAACAACCGCGGGA+CGG - chr5_1:62605078-62605097 None:intergenic 60.0%
!! GGCTCACTAGCCTTTGGGGC+TGG - chr5_1:62598894-62598913 None:intergenic 65.0%
CCCAAAGGCTAGTGAGCCGG+AGG + chr5_1:62598896-62598915 Msa0742640:five_prime_UTR 65.0%
TCGGGAGGCGGTGGAACAGT+TGG + chr5_1:62600840-62600859 Msa0742640:intron 65.0%
CCTGTGGCGTATGCTGCGCA+AGG - chr5_1:62602559-62602578 None:intergenic 65.0%
CCTTGCGCAGCATACGCCAC+AGG + chr5_1:62602556-62602575 Msa0742640:intron 65.0%
GCGCAGCATACGCCACAGGA+AGG + chr5_1:62602560-62602579 Msa0742640:intron 65.0%
ATACCGTGGAGGACCCTCGC+AGG + chr5_1:62605194-62605213 Msa0742640:CDS 65.0%
AAGCCTGCGAGGGTCCTCCA+CGG - chr5_1:62605200-62605219 None:intergenic 65.0%
GTGAGCCGTCCCGCGGTTGT+TGG + chr5_1:62605070-62605089 Msa0742640:CDS 70.0%
AGCCGTCCCGCGGTTGTTGG+AGG + chr5_1:62605073-62605092 Msa0742640:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62598603 62605655 62598603 ID=Msa0742640;Name=Msa0742640
chr5_1 mRNA 62598603 62605655 62598603 ID=Msa0742640-mRNA-1;Parent=Msa0742640;Name=Msa0742640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=314|1|1|1|0.83|0.85|7|421|225
chr5_1 exon 62598603 62598652 62598603 ID=Msa0742640-mRNA-1:exon:18415;Parent=Msa0742640-mRNA-1
chr5_1 exon 62598768 62599025 62598768 ID=Msa0742640-mRNA-1:exon:18416;Parent=Msa0742640-mRNA-1
chr5_1 exon 62599107 62599201 62599107 ID=Msa0742640-mRNA-1:exon:18417;Parent=Msa0742640-mRNA-1
chr5_1 exon 62603790 62603880 62603790 ID=Msa0742640-mRNA-1:exon:18418;Parent=Msa0742640-mRNA-1
chr5_1 exon 62603971 62604081 62603971 ID=Msa0742640-mRNA-1:exon:18419;Parent=Msa0742640-mRNA-1
chr5_1 exon 62604446 62604640 62604446 ID=Msa0742640-mRNA-1:exon:18420;Parent=Msa0742640-mRNA-1
chr5_1 exon 62605043 62605655 62605043 ID=Msa0742640-mRNA-1:exon:18421;Parent=Msa0742640-mRNA-1
chr5_1 five_prime_UTR 62598603 62598652 62598603 ID=Msa0742640-mRNA-1:five_prime_utr;Parent=Msa0742640-mRNA-1
chr5_1 five_prime_UTR 62598768 62599025 62598768 ID=Msa0742640-mRNA-1:five_prime_utr;Parent=Msa0742640-mRNA-1
chr5_1 five_prime_UTR 62599107 62599112 62599107 ID=Msa0742640-mRNA-1:five_prime_utr;Parent=Msa0742640-mRNA-1
chr5_1 CDS 62599113 62599201 62599113 ID=Msa0742640-mRNA-1:cds;Parent=Msa0742640-mRNA-1
chr5_1 CDS 62603790 62603880 62603790 ID=Msa0742640-mRNA-1:cds;Parent=Msa0742640-mRNA-1
chr5_1 CDS 62603971 62604081 62603971 ID=Msa0742640-mRNA-1:cds;Parent=Msa0742640-mRNA-1
chr5_1 CDS 62604446 62604640 62604446 ID=Msa0742640-mRNA-1:cds;Parent=Msa0742640-mRNA-1
chr5_1 CDS 62605043 62605234 62605043 ID=Msa0742640-mRNA-1:cds;Parent=Msa0742640-mRNA-1
chr5_1 three_prime_UTR 62605235 62605655 62605235 ID=Msa0742640-mRNA-1:three_prime_utr;Parent=Msa0742640-mRNA-1
Gene Sequence

>Msa0742640

ATGACAAGGCTTCGGAAACGGGTTGCTCAACGGTTGAAGGATTCCCAAAACACATTTGCTATGCTGACAACCTTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTGCTGATCATAAGGATGCTTTCGTTGAAAAGCATGGAGTCAAATTGGGACTTATGTCTGGGTTTATCAAAGCTGCTGTCAATGCACTTCAATATCAACCAATTGTCAATGCAGTCATTGATGGGGATGATATTATATACAGAGATTATATTGATATCAGCATAGCTGTTGGAACTCCGAAGGGACTTGTTGTGCCTGTCATCCGAAATGCGGATAAAATGAACTTTGCGGATATAGAAGAACAGATCAATGTTTTTGCAAAGAAGGCTAATGCTGGAACTTTATCAATTGATGAGATGGCCGGAGGCACTCTTACAATATCAAATGGTGGTGTTTATGGCAGTCTTTTGAGTACCCCTATTATCAACCCACCTCAGTCGGCAATCTTGGGTATGCATTCAATTGTGAGCCGTCCCGCGGTTGTTGGAGGAAATGTTGTTCCAAGGCCACTGATGTACATTGCTCTAACATATGACCATAGAATCATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGACGGATCAAAGATACCGTGGAGGACCCTCGCAGGCTTTTGCTCGACATATAA
Protein sequence

>Msa0742640

MTRLRKRVAQRLKDSQNTFAMLTTFNEVDMTNLMKLRADHKDAFVEKHGVKLGLMSGFIKAAVNALQYQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADKMNFADIEEQINVFAKKANAGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPAVVGGNVVPRPLMYIALTYDHRIIDGREAVFFLRRIKDTVEDPRRLLLDI*