Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0744790 | Msa0744820 | 0.943559 | 9.664123e-103 | -8.615850e-47 |
| Msa0744790 | Msa0879520 | 0.956443 | 2.912066e-114 | -8.615850e-47 |
| Msa0744790 | Msa1299420 | 0.951728 | 1.106573e-109 | -8.615850e-47 |
| Msa0546050 | Msa0744790 | 0.839990 | 1.138321e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATAATAACAGTGAAAC+TGG | 0.302635 | 5_1:+65846067 | None:intergenic |
| TGTGTTCTAGCAACTTGAAT+TGG | 0.324721 | 5_1:+65846591 | None:intergenic |
| GACTGCTAAGGGACATCAAA+TGG | 0.354379 | 5_1:-65845952 | Msa0744790:three_prime_UTR |
| AGCACTAACTCAGCATGTTC+AGG | 0.362910 | 5_1:+65846531 | None:intergenic |
| TGAATTGGAATTTGAGGAAA+AGG | 0.370298 | 5_1:+65846606 | None:intergenic |
| GCAACTTGAATTGGAATTTG+AGG | 0.378140 | 5_1:+65846600 | None:intergenic |
| TGTGGGATCAAGATATATAA+AGG | 0.423750 | 5_1:-65846112 | Msa0744790:exon |
| TCAAAATTACCTCTTGAAGC+TGG | 0.465001 | 5_1:+65847735 | None:intergenic |
| ACTCAGCATGTTCAGGTCCT+TGG | 0.469300 | 5_1:+65846538 | None:intergenic |
| GGAAAAGGATTCTGAGTTGA+TGG | 0.475687 | 5_1:+65846621 | None:intergenic |
| TTTAATCATATGACTGCTAA+GGG | 0.486787 | 5_1:-65845963 | Msa0744790:three_prime_UTR |
| AATAACAGTGAAACTGGATC+TGG | 0.488205 | 5_1:+65846073 | None:intergenic |
| ACTGCTAAGGGACATCAAAT+GGG | 0.515323 | 5_1:-65845951 | Msa0744790:three_prime_UTR |
| TAATGTATCTTGATCTATTG+TGG | 0.528080 | 5_1:-65846130 | Msa0744790:CDS |
| AATGTATCTTGATCTATTGT+GGG | 0.535708 | 5_1:-65846129 | Msa0744790:CDS |
| CAAACTATGAATAATGAAGC+TGG | 0.552669 | 5_1:-65846651 | Msa0744790:CDS |
| TGCTAGAACACAAGAAGTTG+AGG | 0.602315 | 5_1:-65846580 | Msa0744790:CDS |
| GAGGCTGCTGAATTAGTACA+TGG | 0.624946 | 5_1:-65846561 | Msa0744790:CDS |
| GCTGAATTAGTACATGGCCA+AGG | 0.646206 | 5_1:-65846555 | Msa0744790:CDS |
| GGGATCAAGATATATAAAGG+AGG | 0.651640 | 5_1:-65846109 | Msa0744790:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATCTTTTTCTGATATA+TGG | - | chr5_1:65845959-65845978 | Msa0744790:three_prime_UTR | 15.0% |
| !! | AAAATGTAACAAACATAATT+TGG | + | chr5_1:65846367-65846386 | None:intergenic | 15.0% |
| !! | AATATATGATTCTTTATCTT+TGG | - | chr5_1:65846603-65846622 | Msa0744790:CDS | 15.0% |
| !! | TCTTTACTAATTATTATCAA+AGG | + | chr5_1:65846861-65846880 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAATAATGAAGC+TGG | - | chr5_1:65847313-65847332 | Msa0744790:intron | 15.0% |
| !!! | ACTGTATTAAGTTTTTTATT+AGG | - | chr5_1:65847965-65847984 | Msa0744790:intron | 15.0% |
| !!! | ATTAATCTTTTTCTGATATA+TGG | - | chr5_1:65845959-65845978 | Msa0744790:three_prime_UTR | 15.0% |
| !! | AAAATGTAACAAACATAATT+TGG | + | chr5_1:65846367-65846386 | None:intergenic | 15.0% |
| !! | AATATATGATTCTTTATCTT+TGG | - | chr5_1:65846603-65846622 | Msa0744790:CDS | 15.0% |
| !! | TCTTTACTAATTATTATCAA+AGG | + | chr5_1:65846861-65846880 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAATAATGAAGC+TGG | - | chr5_1:65847313-65847332 | Msa0744790:intron | 15.0% |
| !!! | ACTGTATTAAGTTTTTTATT+AGG | - | chr5_1:65847965-65847984 | Msa0744790:intron | 15.0% |
| !! | ACAAACATAATTTGGATAAA+AGG | + | chr5_1:65846359-65846378 | None:intergenic | 20.0% |
| !!! | AGTTCTAACATTTATAGTAA+TGG | - | chr5_1:65846419-65846438 | Msa0744790:intron | 20.0% |
| !! | TGGAGAATAGATAAAATATA+AGG | - | chr5_1:65846721-65846740 | Msa0744790:intron | 20.0% |
| !!! | ATGAAGGTATCTTTAATAAA+AGG | + | chr5_1:65846834-65846853 | None:intergenic | 20.0% |
| !! | TATTATCAAAGGTTAAATGA+AGG | + | chr5_1:65846850-65846869 | None:intergenic | 20.0% |
| !! | AATATCAAAAGATAAGTTAG+CGG | + | chr5_1:65846908-65846927 | None:intergenic | 20.0% |
| !! | AATTTATTAGGTGAGTATTT+AGG | + | chr5_1:65847298-65847317 | None:intergenic | 20.0% |
| !!! | AAAAACTACCTTTATCTTTT+TGG | + | chr5_1:65847658-65847677 | None:intergenic | 20.0% |
| !!! | TGCTATATTGTTATATTTTG+TGG | - | chr5_1:65847782-65847801 | Msa0744790:intron | 20.0% |
| !! | ACAAACATAATTTGGATAAA+AGG | + | chr5_1:65846359-65846378 | None:intergenic | 20.0% |
| !!! | AGTTCTAACATTTATAGTAA+TGG | - | chr5_1:65846419-65846438 | Msa0744790:intron | 20.0% |
| !! | TGGAGAATAGATAAAATATA+AGG | - | chr5_1:65846721-65846740 | Msa0744790:intron | 20.0% |
| !!! | ATGAAGGTATCTTTAATAAA+AGG | + | chr5_1:65846834-65846853 | None:intergenic | 20.0% |
| !! | TATTATCAAAGGTTAAATGA+AGG | + | chr5_1:65846850-65846869 | None:intergenic | 20.0% |
| !! | AATATCAAAAGATAAGTTAG+CGG | + | chr5_1:65846908-65846927 | None:intergenic | 20.0% |
| !! | AATTTATTAGGTGAGTATTT+AGG | + | chr5_1:65847298-65847317 | None:intergenic | 20.0% |
| !!! | AAAAACTACCTTTATCTTTT+TGG | + | chr5_1:65847658-65847677 | None:intergenic | 20.0% |
| !!! | TGCTATATTGTTATATTTTG+TGG | - | chr5_1:65847782-65847801 | Msa0744790:intron | 20.0% |
| !! | TTTTCTCTTTTTATCAGCTT+TGG | - | chr5_1:65846218-65846237 | Msa0744790:intron | 25.0% |
| !!! | ATTCTTTATCTTTGGAGTTT+TGG | - | chr5_1:65846611-65846630 | Msa0744790:CDS | 25.0% |
| !! | ATTTTATCTATTCTCCAAAG+TGG | + | chr5_1:65846718-65846737 | None:intergenic | 25.0% |
| !! | GTTTGTTACATTAATTGCTA+TGG | - | chr5_1:65846781-65846800 | Msa0744790:intron | 25.0% |
| ! | TACAATATACACAAATGACA+AGG | + | chr5_1:65846995-65847014 | None:intergenic | 25.0% |
| !! | TGTCATTTGTGTATATTGTA+TGG | - | chr5_1:65846995-65847014 | Msa0744790:intron | 25.0% |
| ! | AGGACTGTAATAATGTTTAA+GGG | + | chr5_1:65847278-65847297 | None:intergenic | 25.0% |
| ! | TAGGACTGTAATAATGTTTA+AGG | + | chr5_1:65847279-65847298 | None:intergenic | 25.0% |
| ! | TGATATGTCCAAAAAGATAA+AGG | - | chr5_1:65847647-65847666 | Msa0744790:intron | 25.0% |
| !!! | ATTTTCTGTATTTTTTGCAC+AGG | - | chr5_1:65847832-65847851 | Msa0744790:intron | 25.0% |
| ! | TAATGTATCTTGATCTATTG+TGG | - | chr5_1:65847873-65847892 | Msa0744790:intron | 25.0% |
| ! | AATGTATCTTGATCTATTGT+GGG | - | chr5_1:65847874-65847893 | Msa0744790:intron | 25.0% |
| ! | GAAAATAATAACAGTGAAAC+TGG | + | chr5_1:65847939-65847958 | None:intergenic | 25.0% |
| !! | TTTTAATCATATGACTGCTA+AGG | - | chr5_1:65848039-65848058 | Msa0744790:intron | 25.0% |
| ! | TTTAATCATATGACTGCTAA+GGG | - | chr5_1:65848040-65848059 | Msa0744790:intron | 25.0% |
| !! | TTTTCTCTTTTTATCAGCTT+TGG | - | chr5_1:65846218-65846237 | Msa0744790:intron | 25.0% |
| !!! | ATTCTTTATCTTTGGAGTTT+TGG | - | chr5_1:65846611-65846630 | Msa0744790:CDS | 25.0% |
| !! | ATTTTATCTATTCTCCAAAG+TGG | + | chr5_1:65846718-65846737 | None:intergenic | 25.0% |
| !! | GTTTGTTACATTAATTGCTA+TGG | - | chr5_1:65846781-65846800 | Msa0744790:intron | 25.0% |
| ! | TACAATATACACAAATGACA+AGG | + | chr5_1:65846995-65847014 | None:intergenic | 25.0% |
| !! | TGTCATTTGTGTATATTGTA+TGG | - | chr5_1:65846995-65847014 | Msa0744790:intron | 25.0% |
| ! | AGGACTGTAATAATGTTTAA+GGG | + | chr5_1:65847278-65847297 | None:intergenic | 25.0% |
| ! | TAGGACTGTAATAATGTTTA+AGG | + | chr5_1:65847279-65847298 | None:intergenic | 25.0% |
| ! | TGATATGTCCAAAAAGATAA+AGG | - | chr5_1:65847647-65847666 | Msa0744790:intron | 25.0% |
| !!! | ATTTTCTGTATTTTTTGCAC+AGG | - | chr5_1:65847832-65847851 | Msa0744790:intron | 25.0% |
| ! | TAATGTATCTTGATCTATTG+TGG | - | chr5_1:65847873-65847892 | Msa0744790:intron | 25.0% |
| ! | AATGTATCTTGATCTATTGT+GGG | - | chr5_1:65847874-65847893 | Msa0744790:intron | 25.0% |
| ! | GAAAATAATAACAGTGAAAC+TGG | + | chr5_1:65847939-65847958 | None:intergenic | 25.0% |
| !! | TTTTAATCATATGACTGCTA+AGG | - | chr5_1:65848039-65848058 | Msa0744790:intron | 25.0% |
| ! | TTTAATCATATGACTGCTAA+GGG | - | chr5_1:65848040-65848059 | Msa0744790:intron | 25.0% |
| CATAATTTGGATAAAAGGAC+TGG | + | chr5_1:65846354-65846373 | None:intergenic | 30.0% | |
| ATATATATGTGTGTCTGTCT+AGG | - | chr5_1:65846467-65846486 | Msa0744790:intron | 30.0% | |
| GGAACTAAGGAAGAAAAATT+AGG | + | chr5_1:65846522-65846541 | None:intergenic | 30.0% | |
| !! | ATTTGAGTTCTAAGGAACTA+AGG | + | chr5_1:65846535-65846554 | None:intergenic | 30.0% |
| ! | TAGAGATCATTTGAGTTCTA+AGG | + | chr5_1:65846543-65846562 | None:intergenic | 30.0% |
| ! | CTTTAATAAAAGGTTGACTC+AGG | + | chr5_1:65846824-65846843 | None:intergenic | 30.0% |
| TCTAGAAAAGATGAATCAAG+AGG | - | chr5_1:65846931-65846950 | Msa0744790:intron | 30.0% | |
| ! | TGCATGATTTTTAATGCCTA+TGG | - | chr5_1:65847087-65847106 | Msa0744790:intron | 30.0% |
| ATAAAAAACTCAGCAGACAT+AGG | + | chr5_1:65847197-65847216 | None:intergenic | 30.0% | |
| CAAACTATGAATAATGAAGC+TGG | - | chr5_1:65847352-65847371 | Msa0744790:intron | 30.0% | |
| TGAATTGGAATTTGAGGAAA+AGG | + | chr5_1:65847400-65847419 | None:intergenic | 30.0% | |
| AGTGAAACAGAAGTTACAAA+AGG | + | chr5_1:65847572-65847591 | None:intergenic | 30.0% | |
| TGTGGGATCAAGATATATAA+AGG | - | chr5_1:65847891-65847910 | Msa0744790:intron | 30.0% | |
| CATAATTTGGATAAAAGGAC+TGG | + | chr5_1:65846354-65846373 | None:intergenic | 30.0% | |
| ATATATATGTGTGTCTGTCT+AGG | - | chr5_1:65846467-65846486 | Msa0744790:intron | 30.0% | |
| GGAACTAAGGAAGAAAAATT+AGG | + | chr5_1:65846522-65846541 | None:intergenic | 30.0% | |
| !! | ATTTGAGTTCTAAGGAACTA+AGG | + | chr5_1:65846535-65846554 | None:intergenic | 30.0% |
| ! | TAGAGATCATTTGAGTTCTA+AGG | + | chr5_1:65846543-65846562 | None:intergenic | 30.0% |
| ! | CTTTAATAAAAGGTTGACTC+AGG | + | chr5_1:65846824-65846843 | None:intergenic | 30.0% |
| TCTAGAAAAGATGAATCAAG+AGG | - | chr5_1:65846931-65846950 | Msa0744790:intron | 30.0% | |
| ! | TGCATGATTTTTAATGCCTA+TGG | - | chr5_1:65847087-65847106 | Msa0744790:intron | 30.0% |
| ATAAAAAACTCAGCAGACAT+AGG | + | chr5_1:65847197-65847216 | None:intergenic | 30.0% | |
| CAAACTATGAATAATGAAGC+TGG | - | chr5_1:65847352-65847371 | Msa0744790:intron | 30.0% | |
| TGAATTGGAATTTGAGGAAA+AGG | + | chr5_1:65847400-65847419 | None:intergenic | 30.0% | |
| AGTGAAACAGAAGTTACAAA+AGG | + | chr5_1:65847572-65847591 | None:intergenic | 30.0% | |
| TGTGGGATCAAGATATATAA+AGG | - | chr5_1:65847891-65847910 | Msa0744790:intron | 30.0% | |
| ! | AAGCTTCAAGTTAGAATGTG+TGG | - | chr5_1:65846148-65846167 | Msa0744790:CDS | 35.0% |
| ! | AGCTTCAAGTTAGAATGTGT+GGG | - | chr5_1:65846149-65846168 | Msa0744790:CDS | 35.0% |
| TCAAAATTACCTCTTGAAGC+TGG | + | chr5_1:65846271-65846290 | None:intergenic | 35.0% | |
| !! | TTCTGAGGTTCTAGTTATAG+AGG | - | chr5_1:65846640-65846659 | Msa0744790:CDS | 35.0% |
| ! | TCTGAGGTTCTAGTTATAGA+GGG | - | chr5_1:65846641-65846660 | Msa0744790:CDS | 35.0% |
| TGCATAGAAATTGACCACTT+TGG | - | chr5_1:65846701-65846720 | Msa0744790:intron | 35.0% | |
| GCAACTTGAATTGGAATTTG+AGG | + | chr5_1:65847406-65847425 | None:intergenic | 35.0% | |
| TGTGTTCTAGCAACTTGAAT+TGG | + | chr5_1:65847415-65847434 | None:intergenic | 35.0% | |
| TAAGCATGTTGTTAGTTCGA+TGG | + | chr5_1:65847618-65847637 | None:intergenic | 35.0% | |
| GGGATCAAGATATATAAAGG+AGG | - | chr5_1:65847894-65847913 | Msa0744790:intron | 35.0% | |
| AATAACAGTGAAACTGGATC+TGG | + | chr5_1:65847933-65847952 | None:intergenic | 35.0% | |
| ! | AAGCTTCAAGTTAGAATGTG+TGG | - | chr5_1:65846148-65846167 | Msa0744790:CDS | 35.0% |
| ! | AGCTTCAAGTTAGAATGTGT+GGG | - | chr5_1:65846149-65846168 | Msa0744790:CDS | 35.0% |
| TCAAAATTACCTCTTGAAGC+TGG | + | chr5_1:65846271-65846290 | None:intergenic | 35.0% | |
| !! | TTCTGAGGTTCTAGTTATAG+AGG | - | chr5_1:65846640-65846659 | Msa0744790:CDS | 35.0% |
| ! | TCTGAGGTTCTAGTTATAGA+GGG | - | chr5_1:65846641-65846660 | Msa0744790:CDS | 35.0% |
| TGCATAGAAATTGACCACTT+TGG | - | chr5_1:65846701-65846720 | Msa0744790:intron | 35.0% | |
| GCAACTTGAATTGGAATTTG+AGG | + | chr5_1:65847406-65847425 | None:intergenic | 35.0% | |
| TGTGTTCTAGCAACTTGAAT+TGG | + | chr5_1:65847415-65847434 | None:intergenic | 35.0% | |
| TAAGCATGTTGTTAGTTCGA+TGG | + | chr5_1:65847618-65847637 | None:intergenic | 35.0% | |
| GGGATCAAGATATATAAAGG+AGG | - | chr5_1:65847894-65847913 | Msa0744790:intron | 35.0% | |
| AATAACAGTGAAACTGGATC+TGG | + | chr5_1:65847933-65847952 | None:intergenic | 35.0% | |
| ! | GCAAATTTTCCAGCTTCAAG+AGG | - | chr5_1:65846259-65846278 | Msa0744790:intron | 40.0% |
| AATCAAGAGGCTAATGAGCA+AGG | - | chr5_1:65846944-65846963 | Msa0744790:intron | 40.0% | |
| ACTAAGTGTGCATAGAGACA+TGG | + | chr5_1:65847150-65847169 | None:intergenic | 40.0% | |
| ! | GGAAAAGGATTCTGAGTTGA+TGG | + | chr5_1:65847385-65847404 | None:intergenic | 40.0% |
| TGCTAGAACACAAGAAGTTG+AGG | - | chr5_1:65847423-65847442 | Msa0744790:intron | 40.0% | |
| AAATGTCTCCAAGCCATTGA+AGG | + | chr5_1:65847529-65847548 | None:intergenic | 40.0% | |
| ACTGCTAAGGGACATCAAAT+GGG | - | chr5_1:65848052-65848071 | Msa0744790:intron | 40.0% | |
| ! | GCAAATTTTCCAGCTTCAAG+AGG | - | chr5_1:65846259-65846278 | Msa0744790:intron | 40.0% |
| AATCAAGAGGCTAATGAGCA+AGG | - | chr5_1:65846944-65846963 | Msa0744790:intron | 40.0% | |
| ACTAAGTGTGCATAGAGACA+TGG | + | chr5_1:65847150-65847169 | None:intergenic | 40.0% | |
| ! | GGAAAAGGATTCTGAGTTGA+TGG | + | chr5_1:65847385-65847404 | None:intergenic | 40.0% |
| TGCTAGAACACAAGAAGTTG+AGG | - | chr5_1:65847423-65847442 | Msa0744790:intron | 40.0% | |
| AAATGTCTCCAAGCCATTGA+AGG | + | chr5_1:65847529-65847548 | None:intergenic | 40.0% | |
| !! | GAGTTTTGGCAGTAGTTCTG+AGG | - | chr5_1:65846625-65846644 | Msa0744790:CDS | 45.0% |
| ATAAACGACTCAGCAGCCAT+AGG | + | chr5_1:65847106-65847125 | None:intergenic | 45.0% | |
| GAGGCTGCTGAATTAGTACA+TGG | - | chr5_1:65847442-65847461 | Msa0744790:intron | 45.0% | |
| GCTGAATTAGTACATGGCCA+AGG | - | chr5_1:65847448-65847467 | Msa0744790:intron | 45.0% | |
| AGCACTAACTCAGCATGTTC+AGG | + | chr5_1:65847475-65847494 | None:intergenic | 45.0% | |
| CCATTGAAGGATGTCTAGCA+TGG | + | chr5_1:65847516-65847535 | None:intergenic | 45.0% | |
| CCATGCTAGACATCCTTCAA+TGG | - | chr5_1:65847513-65847532 | Msa0744790:intron | 45.0% | |
| CTAGACATCCTTCAATGGCT+TGG | - | chr5_1:65847518-65847537 | Msa0744790:intron | 45.0% | |
| GACTGCTAAGGGACATCAAA+TGG | - | chr5_1:65848051-65848070 | Msa0744790:intron | 45.0% | |
| !! | GAGTTTTGGCAGTAGTTCTG+AGG | - | chr5_1:65846625-65846644 | Msa0744790:CDS | 45.0% |
| ATAAACGACTCAGCAGCCAT+AGG | + | chr5_1:65847106-65847125 | None:intergenic | 45.0% | |
| GAGGCTGCTGAATTAGTACA+TGG | - | chr5_1:65847442-65847461 | Msa0744790:intron | 45.0% | |
| GCTGAATTAGTACATGGCCA+AGG | - | chr5_1:65847448-65847467 | Msa0744790:intron | 45.0% | |
| AGCACTAACTCAGCATGTTC+AGG | + | chr5_1:65847475-65847494 | None:intergenic | 45.0% | |
| CCATTGAAGGATGTCTAGCA+TGG | + | chr5_1:65847516-65847535 | None:intergenic | 45.0% | |
| CCATGCTAGACATCCTTCAA+TGG | - | chr5_1:65847513-65847532 | Msa0744790:intron | 45.0% | |
| CTAGACATCCTTCAATGGCT+TGG | - | chr5_1:65847518-65847537 | Msa0744790:intron | 45.0% | |
| GACTGCTAAGGGACATCAAA+TGG | - | chr5_1:65848051-65848070 | Msa0744790:intron | 45.0% | |
| !! | TCATTATTTAAAAATTTATT+AGG | + | chr5_1:65847310-65847329 | None:intergenic | 5.0% |
| !!! | ATTTTTAAACTTATTTTTAT+TGG | - | chr5_1:65847997-65848016 | Msa0744790:intron | 5.0% |
| !! | TCATTATTTAAAAATTTATT+AGG | + | chr5_1:65847310-65847329 | None:intergenic | 5.0% |
| !!! | ATTTTTAAACTTATTTTTAT+TGG | - | chr5_1:65847997-65848016 | Msa0744790:intron | 5.0% |
| ACTCAGCATGTTCAGGTCCT+TGG | + | chr5_1:65847468-65847487 | None:intergenic | 50.0% | |
| ACTCAGCATGTTCAGGTCCT+TGG | + | chr5_1:65847468-65847487 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 65845951 | 65848074 | 65845951 | ID=Msa0744790;Name=Msa0744790 |
| chr5_1 | mRNA | 65845951 | 65848074 | 65845951 | ID=Msa0744790-mRNA-1;Parent=Msa0744790;Name=Msa0744790-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0.25|0.25|0|0.5|4|164|88 |
| chr5_1 | exon | 65845951 | 65846171 | 65845951 | ID=Msa0744790-mRNA-1:exon:19583;Parent=Msa0744790-mRNA-1 |
| chr5_1 | exon | 65846536 | 65846693 | 65846536 | ID=Msa0744790-mRNA-1:exon:19582;Parent=Msa0744790-mRNA-1 |
| chr5_1 | exon | 65847745 | 65847790 | 65847745 | ID=Msa0744790-mRNA-1:exon:19581;Parent=Msa0744790-mRNA-1 |
| chr5_1 | exon | 65848069 | 65848074 | 65848069 | ID=Msa0744790-mRNA-1:exon:19580;Parent=Msa0744790-mRNA-1 |
| chr5_1 | CDS | 65848069 | 65848074 | 65848069 | ID=Msa0744790-mRNA-1:cds;Parent=Msa0744790-mRNA-1 |
| chr5_1 | CDS | 65847745 | 65847790 | 65847745 | ID=Msa0744790-mRNA-1:cds;Parent=Msa0744790-mRNA-1 |
| chr5_1 | CDS | 65846536 | 65846693 | 65846536 | ID=Msa0744790-mRNA-1:cds;Parent=Msa0744790-mRNA-1 |
| chr5_1 | CDS | 65846115 | 65846171 | 65846115 | ID=Msa0744790-mRNA-1:cds;Parent=Msa0744790-mRNA-1 |
| chr5_1 | three_prime_UTR | 65845951 | 65846114 | 65845951 | ID=Msa0744790-mRNA-1:three_prime_utr;Parent=Msa0744790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
