Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0744790 | Msa1299420 | 0.951728 | 1.106573e-109 | -8.615850e-47 |
| Msa0744820 | Msa1299420 | 0.955558 | 2.297975e-113 | -8.615850e-47 |
| Msa0546050 | Msa1299420 | 0.823680 | 1.215635e-53 | -8.615850e-47 |
| Msa0879520 | Msa1299420 | 0.975740 | 1.644350e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATAATAACAGTGAAAC+TGG | 0.302635 | 8_3:+60592339 | None:intergenic |
| TGTGTTCTAGCAACTTGAAT+TGG | 0.324721 | 8_3:+60592863 | None:intergenic |
| GACTGCTAAGGGACATCAAA+TGG | 0.354379 | 8_3:-60592224 | Msa1299420:three_prime_UTR |
| AGCACTAACTCAGCATGTTC+AGG | 0.362910 | 8_3:+60592803 | None:intergenic |
| TGAATTGGAATTTGAGGAAA+AGG | 0.370298 | 8_3:+60592878 | None:intergenic |
| GCAACTTGAATTGGAATTTG+AGG | 0.378140 | 8_3:+60592872 | None:intergenic |
| TGTGGGATCAAGATATATAA+AGG | 0.423750 | 8_3:-60592384 | Msa1299420:exon |
| TCAAAATTACCTCTTGAAGC+TGG | 0.465001 | 8_3:+60594007 | None:intergenic |
| ACTCAGCATGTTCAGGTCCT+TGG | 0.469300 | 8_3:+60592810 | None:intergenic |
| GGAAAAGGATTCTGAGTTGA+TGG | 0.475687 | 8_3:+60592893 | None:intergenic |
| TTTAATCATATGACTGCTAA+GGG | 0.486787 | 8_3:-60592235 | Msa1299420:three_prime_UTR |
| AATAACAGTGAAACTGGATC+TGG | 0.488205 | 8_3:+60592345 | None:intergenic |
| ACTGCTAAGGGACATCAAAT+GGG | 0.515323 | 8_3:-60592223 | Msa1299420:three_prime_UTR |
| TAATGTATCTTGATCTATTG+TGG | 0.528080 | 8_3:-60592402 | Msa1299420:CDS |
| AATGTATCTTGATCTATTGT+GGG | 0.535708 | 8_3:-60592401 | Msa1299420:CDS |
| CAAACTATGAATAATGAAGC+TGG | 0.552669 | 8_3:-60592923 | Msa1299420:CDS |
| TGCTAGAACACAAGAAGTTG+AGG | 0.602315 | 8_3:-60592852 | Msa1299420:CDS |
| GAGGCTGCTGAATTAGTACA+TGG | 0.624946 | 8_3:-60592833 | Msa1299420:CDS |
| GCTGAATTAGTACATGGCCA+AGG | 0.646206 | 8_3:-60592827 | Msa1299420:CDS |
| GGGATCAAGATATATAAAGG+AGG | 0.651640 | 8_3:-60592381 | Msa1299420:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATCTTTTTCTGATATA+TGG | - | chr8_3:60592231-60592250 | Msa1299420:three_prime_UTR | 15.0% |
| !! | AAAATGTAACAAACATAATT+TGG | + | chr8_3:60592639-60592658 | None:intergenic | 15.0% |
| !! | AATATATGATTCTTTATCTT+TGG | - | chr8_3:60592875-60592894 | Msa1299420:CDS | 15.0% |
| !! | TCTTTACTAATTATTATCAA+AGG | + | chr8_3:60593133-60593152 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAATAATGAAGC+TGG | - | chr8_3:60593585-60593604 | Msa1299420:intron | 15.0% |
| !!! | ACTGTATTAAGTTTTTTATT+AGG | - | chr8_3:60594237-60594256 | Msa1299420:intron | 15.0% |
| !!! | ATTAATCTTTTTCTGATATA+TGG | - | chr8_3:60592231-60592250 | Msa1299420:three_prime_UTR | 15.0% |
| !! | AAAATGTAACAAACATAATT+TGG | + | chr8_3:60592639-60592658 | None:intergenic | 15.0% |
| !! | AATATATGATTCTTTATCTT+TGG | - | chr8_3:60592875-60592894 | Msa1299420:CDS | 15.0% |
| !! | TCTTTACTAATTATTATCAA+AGG | + | chr8_3:60593133-60593152 | None:intergenic | 15.0% |
| !!! | AAATTTTTAAATAATGAAGC+TGG | - | chr8_3:60593585-60593604 | Msa1299420:intron | 15.0% |
| !!! | ACTGTATTAAGTTTTTTATT+AGG | - | chr8_3:60594237-60594256 | Msa1299420:intron | 15.0% |
| !! | ACAAACATAATTTGGATAAA+AGG | + | chr8_3:60592631-60592650 | None:intergenic | 20.0% |
| !!! | AGTTCTAACATTTATAGTAA+TGG | - | chr8_3:60592691-60592710 | Msa1299420:intron | 20.0% |
| !! | TGGAGAATAGATAAAATATA+AGG | - | chr8_3:60592993-60593012 | Msa1299420:intron | 20.0% |
| !!! | ATGAAGGTATCTTTAATAAA+AGG | + | chr8_3:60593106-60593125 | None:intergenic | 20.0% |
| !! | TATTATCAAAGGTTAAATGA+AGG | + | chr8_3:60593122-60593141 | None:intergenic | 20.0% |
| !! | AATATCAAAAGATAAGTTAG+CGG | + | chr8_3:60593180-60593199 | None:intergenic | 20.0% |
| !! | AATTTATTAGGTGAGTATTT+AGG | + | chr8_3:60593570-60593589 | None:intergenic | 20.0% |
| !!! | AAAAACTACCTTTATCTTTT+TGG | + | chr8_3:60593930-60593949 | None:intergenic | 20.0% |
| !!! | TGCTATATTGTTATATTTTG+TGG | - | chr8_3:60594054-60594073 | Msa1299420:intron | 20.0% |
| !! | ACAAACATAATTTGGATAAA+AGG | + | chr8_3:60592631-60592650 | None:intergenic | 20.0% |
| !!! | AGTTCTAACATTTATAGTAA+TGG | - | chr8_3:60592691-60592710 | Msa1299420:intron | 20.0% |
| !! | TGGAGAATAGATAAAATATA+AGG | - | chr8_3:60592993-60593012 | Msa1299420:intron | 20.0% |
| !!! | ATGAAGGTATCTTTAATAAA+AGG | + | chr8_3:60593106-60593125 | None:intergenic | 20.0% |
| !! | TATTATCAAAGGTTAAATGA+AGG | + | chr8_3:60593122-60593141 | None:intergenic | 20.0% |
| !! | AATATCAAAAGATAAGTTAG+CGG | + | chr8_3:60593180-60593199 | None:intergenic | 20.0% |
| !! | AATTTATTAGGTGAGTATTT+AGG | + | chr8_3:60593570-60593589 | None:intergenic | 20.0% |
| !!! | AAAAACTACCTTTATCTTTT+TGG | + | chr8_3:60593930-60593949 | None:intergenic | 20.0% |
| !!! | TGCTATATTGTTATATTTTG+TGG | - | chr8_3:60594054-60594073 | Msa1299420:intron | 20.0% |
| !! | TTTTCTCTTTTTATCAGCTT+TGG | - | chr8_3:60592490-60592509 | Msa1299420:intron | 25.0% |
| !!! | ATTCTTTATCTTTGGAGTTT+TGG | - | chr8_3:60592883-60592902 | Msa1299420:CDS | 25.0% |
| !! | ATTTTATCTATTCTCCAAAG+TGG | + | chr8_3:60592990-60593009 | None:intergenic | 25.0% |
| !! | GTTTGTTACATTAATTGCTA+TGG | - | chr8_3:60593053-60593072 | Msa1299420:intron | 25.0% |
| ! | TACAATATACACAAATGACA+AGG | + | chr8_3:60593267-60593286 | None:intergenic | 25.0% |
| !! | TGTCATTTGTGTATATTGTA+TGG | - | chr8_3:60593267-60593286 | Msa1299420:intron | 25.0% |
| ! | AGGACTGTAATAATGTTTAA+GGG | + | chr8_3:60593550-60593569 | None:intergenic | 25.0% |
| ! | TAGGACTGTAATAATGTTTA+AGG | + | chr8_3:60593551-60593570 | None:intergenic | 25.0% |
| ! | TGATATGTCCAAAAAGATAA+AGG | - | chr8_3:60593919-60593938 | Msa1299420:intron | 25.0% |
| !!! | ATTTTCTGTATTTTTTGCAC+AGG | - | chr8_3:60594104-60594123 | Msa1299420:intron | 25.0% |
| ! | TAATGTATCTTGATCTATTG+TGG | - | chr8_3:60594145-60594164 | Msa1299420:intron | 25.0% |
| ! | AATGTATCTTGATCTATTGT+GGG | - | chr8_3:60594146-60594165 | Msa1299420:intron | 25.0% |
| ! | GAAAATAATAACAGTGAAAC+TGG | + | chr8_3:60594211-60594230 | None:intergenic | 25.0% |
| !! | TTTTAATCATATGACTGCTA+AGG | - | chr8_3:60594311-60594330 | Msa1299420:intron | 25.0% |
| ! | TTTAATCATATGACTGCTAA+GGG | - | chr8_3:60594312-60594331 | Msa1299420:intron | 25.0% |
| !! | TTTTCTCTTTTTATCAGCTT+TGG | - | chr8_3:60592490-60592509 | Msa1299420:intron | 25.0% |
| !!! | ATTCTTTATCTTTGGAGTTT+TGG | - | chr8_3:60592883-60592902 | Msa1299420:CDS | 25.0% |
| !! | ATTTTATCTATTCTCCAAAG+TGG | + | chr8_3:60592990-60593009 | None:intergenic | 25.0% |
| !! | GTTTGTTACATTAATTGCTA+TGG | - | chr8_3:60593053-60593072 | Msa1299420:intron | 25.0% |
| ! | TACAATATACACAAATGACA+AGG | + | chr8_3:60593267-60593286 | None:intergenic | 25.0% |
| !! | TGTCATTTGTGTATATTGTA+TGG | - | chr8_3:60593267-60593286 | Msa1299420:intron | 25.0% |
| ! | AGGACTGTAATAATGTTTAA+GGG | + | chr8_3:60593550-60593569 | None:intergenic | 25.0% |
| ! | TAGGACTGTAATAATGTTTA+AGG | + | chr8_3:60593551-60593570 | None:intergenic | 25.0% |
| ! | TGATATGTCCAAAAAGATAA+AGG | - | chr8_3:60593919-60593938 | Msa1299420:intron | 25.0% |
| !!! | ATTTTCTGTATTTTTTGCAC+AGG | - | chr8_3:60594104-60594123 | Msa1299420:intron | 25.0% |
| ! | TAATGTATCTTGATCTATTG+TGG | - | chr8_3:60594145-60594164 | Msa1299420:intron | 25.0% |
| ! | AATGTATCTTGATCTATTGT+GGG | - | chr8_3:60594146-60594165 | Msa1299420:intron | 25.0% |
| ! | GAAAATAATAACAGTGAAAC+TGG | + | chr8_3:60594211-60594230 | None:intergenic | 25.0% |
| !! | TTTTAATCATATGACTGCTA+AGG | - | chr8_3:60594311-60594330 | Msa1299420:intron | 25.0% |
| ! | TTTAATCATATGACTGCTAA+GGG | - | chr8_3:60594312-60594331 | Msa1299420:intron | 25.0% |
| CATAATTTGGATAAAAGGAC+TGG | + | chr8_3:60592626-60592645 | None:intergenic | 30.0% | |
| ATATATATGTGTGTCTGTCT+AGG | - | chr8_3:60592739-60592758 | Msa1299420:intron | 30.0% | |
| GGAACTAAGGAAGAAAAATT+AGG | + | chr8_3:60592794-60592813 | None:intergenic | 30.0% | |
| !! | ATTTGAGTTCTAAGGAACTA+AGG | + | chr8_3:60592807-60592826 | None:intergenic | 30.0% |
| ! | TAGAGATCATTTGAGTTCTA+AGG | + | chr8_3:60592815-60592834 | None:intergenic | 30.0% |
| ! | CTTTAATAAAAGGTTGACTC+AGG | + | chr8_3:60593096-60593115 | None:intergenic | 30.0% |
| TCTAGAAAAGATGAATCAAG+AGG | - | chr8_3:60593203-60593222 | Msa1299420:intron | 30.0% | |
| ! | TGCATGATTTTTAATGCCAA+TGG | - | chr8_3:60593359-60593378 | Msa1299420:intron | 30.0% |
| ATAAAAAACTCAGCAGACAT+AGG | + | chr8_3:60593469-60593488 | None:intergenic | 30.0% | |
| CAAACTATGAATAATGAAGC+TGG | - | chr8_3:60593624-60593643 | Msa1299420:intron | 30.0% | |
| TGAATTGGAATTTGAGGAAA+AGG | + | chr8_3:60593672-60593691 | None:intergenic | 30.0% | |
| AGTGAAACAGAAGTTACAAA+AGG | + | chr8_3:60593844-60593863 | None:intergenic | 30.0% | |
| TGTGGGATCAAGATATATAA+AGG | - | chr8_3:60594163-60594182 | Msa1299420:intron | 30.0% | |
| CATAATTTGGATAAAAGGAC+TGG | + | chr8_3:60592626-60592645 | None:intergenic | 30.0% | |
| ATATATATGTGTGTCTGTCT+AGG | - | chr8_3:60592739-60592758 | Msa1299420:intron | 30.0% | |
| GGAACTAAGGAAGAAAAATT+AGG | + | chr8_3:60592794-60592813 | None:intergenic | 30.0% | |
| !! | ATTTGAGTTCTAAGGAACTA+AGG | + | chr8_3:60592807-60592826 | None:intergenic | 30.0% |
| ! | TAGAGATCATTTGAGTTCTA+AGG | + | chr8_3:60592815-60592834 | None:intergenic | 30.0% |
| ! | CTTTAATAAAAGGTTGACTC+AGG | + | chr8_3:60593096-60593115 | None:intergenic | 30.0% |
| TCTAGAAAAGATGAATCAAG+AGG | - | chr8_3:60593203-60593222 | Msa1299420:intron | 30.0% | |
| ! | TGCATGATTTTTAATGCCAA+TGG | - | chr8_3:60593359-60593378 | Msa1299420:intron | 30.0% |
| ATAAAAAACTCAGCAGACAT+AGG | + | chr8_3:60593469-60593488 | None:intergenic | 30.0% | |
| CAAACTATGAATAATGAAGC+TGG | - | chr8_3:60593624-60593643 | Msa1299420:intron | 30.0% | |
| TGAATTGGAATTTGAGGAAA+AGG | + | chr8_3:60593672-60593691 | None:intergenic | 30.0% | |
| AGTGAAACAGAAGTTACAAA+AGG | + | chr8_3:60593844-60593863 | None:intergenic | 30.0% | |
| TGTGGGATCAAGATATATAA+AGG | - | chr8_3:60594163-60594182 | Msa1299420:intron | 30.0% | |
| ! | AAGCTTCAAGTTAGAATGTG+TGG | - | chr8_3:60592420-60592439 | Msa1299420:CDS | 35.0% |
| ! | AGCTTCAAGTTAGAATGTGT+GGG | - | chr8_3:60592421-60592440 | Msa1299420:CDS | 35.0% |
| TCAAAATTACCTCTTGAAGC+TGG | + | chr8_3:60592543-60592562 | None:intergenic | 35.0% | |
| !! | TTCTGAGGTTCTAGTTATAG+AGG | - | chr8_3:60592912-60592931 | Msa1299420:CDS | 35.0% |
| ! | TCTGAGGTTCTAGTTATAGA+GGG | - | chr8_3:60592913-60592932 | Msa1299420:CDS | 35.0% |
| TGCATAGAAATTGACCACTT+TGG | - | chr8_3:60592973-60592992 | Msa1299420:intron | 35.0% | |
| GCAACTTGAATTGGAATTTG+AGG | + | chr8_3:60593678-60593697 | None:intergenic | 35.0% | |
| TGTGTTCTAGCAACTTGAAT+TGG | + | chr8_3:60593687-60593706 | None:intergenic | 35.0% | |
| TAAGCATGTTGTTAGTTCGA+TGG | + | chr8_3:60593890-60593909 | None:intergenic | 35.0% | |
| GGGATCAAGATATATAAAGG+AGG | - | chr8_3:60594166-60594185 | Msa1299420:intron | 35.0% | |
| AATAACAGTGAAACTGGATC+TGG | + | chr8_3:60594205-60594224 | None:intergenic | 35.0% | |
| ! | AAGCTTCAAGTTAGAATGTG+TGG | - | chr8_3:60592420-60592439 | Msa1299420:CDS | 35.0% |
| ! | AGCTTCAAGTTAGAATGTGT+GGG | - | chr8_3:60592421-60592440 | Msa1299420:CDS | 35.0% |
| TCAAAATTACCTCTTGAAGC+TGG | + | chr8_3:60592543-60592562 | None:intergenic | 35.0% | |
| !! | TTCTGAGGTTCTAGTTATAG+AGG | - | chr8_3:60592912-60592931 | Msa1299420:CDS | 35.0% |
| ! | TCTGAGGTTCTAGTTATAGA+GGG | - | chr8_3:60592913-60592932 | Msa1299420:CDS | 35.0% |
| TGCATAGAAATTGACCACTT+TGG | - | chr8_3:60592973-60592992 | Msa1299420:intron | 35.0% | |
| GCAACTTGAATTGGAATTTG+AGG | + | chr8_3:60593678-60593697 | None:intergenic | 35.0% | |
| TGTGTTCTAGCAACTTGAAT+TGG | + | chr8_3:60593687-60593706 | None:intergenic | 35.0% | |
| TAAGCATGTTGTTAGTTCGA+TGG | + | chr8_3:60593890-60593909 | None:intergenic | 35.0% | |
| GGGATCAAGATATATAAAGG+AGG | - | chr8_3:60594166-60594185 | Msa1299420:intron | 35.0% | |
| AATAACAGTGAAACTGGATC+TGG | + | chr8_3:60594205-60594224 | None:intergenic | 35.0% | |
| ! | GCAAATTTTCCAGCTTCAAG+AGG | - | chr8_3:60592531-60592550 | Msa1299420:intron | 40.0% |
| AATCAAGAGGCTAATGAGCA+AGG | - | chr8_3:60593216-60593235 | Msa1299420:intron | 40.0% | |
| ACTAAGTGTGCATAGAGACA+TGG | + | chr8_3:60593422-60593441 | None:intergenic | 40.0% | |
| ! | GGAAAAGGATTCTGAGTTGA+TGG | + | chr8_3:60593657-60593676 | None:intergenic | 40.0% |
| TGCTAGAACACAAGAAGTTG+AGG | - | chr8_3:60593695-60593714 | Msa1299420:intron | 40.0% | |
| AAATGTCTCCAAGCCATTGA+AGG | + | chr8_3:60593801-60593820 | None:intergenic | 40.0% | |
| ACTGCTAAGGGACATCAAAT+GGG | - | chr8_3:60594324-60594343 | Msa1299420:intron | 40.0% | |
| ! | GCAAATTTTCCAGCTTCAAG+AGG | - | chr8_3:60592531-60592550 | Msa1299420:intron | 40.0% |
| AATCAAGAGGCTAATGAGCA+AGG | - | chr8_3:60593216-60593235 | Msa1299420:intron | 40.0% | |
| ACTAAGTGTGCATAGAGACA+TGG | + | chr8_3:60593422-60593441 | None:intergenic | 40.0% | |
| ! | GGAAAAGGATTCTGAGTTGA+TGG | + | chr8_3:60593657-60593676 | None:intergenic | 40.0% |
| TGCTAGAACACAAGAAGTTG+AGG | - | chr8_3:60593695-60593714 | Msa1299420:intron | 40.0% | |
| AAATGTCTCCAAGCCATTGA+AGG | + | chr8_3:60593801-60593820 | None:intergenic | 40.0% | |
| !! | GAGTTTTGGCAGTAGTTCTG+AGG | - | chr8_3:60592897-60592916 | Msa1299420:CDS | 45.0% |
| ATAAACGACTCAGCAGCCAT+TGG | + | chr8_3:60593378-60593397 | None:intergenic | 45.0% | |
| GAGGCTGCTGAATTAGTACA+TGG | - | chr8_3:60593714-60593733 | Msa1299420:intron | 45.0% | |
| GCTGAATTAGTACATGGCCA+AGG | - | chr8_3:60593720-60593739 | Msa1299420:intron | 45.0% | |
| AGCACTAACTCAGCATGTTC+AGG | + | chr8_3:60593747-60593766 | None:intergenic | 45.0% | |
| CCATTGAAGGATGTCTAGCA+TGG | + | chr8_3:60593788-60593807 | None:intergenic | 45.0% | |
| CCATGCTAGACATCCTTCAA+TGG | - | chr8_3:60593785-60593804 | Msa1299420:intron | 45.0% | |
| CTAGACATCCTTCAATGGCT+TGG | - | chr8_3:60593790-60593809 | Msa1299420:intron | 45.0% | |
| GACTGCTAAGGGACATCAAA+TGG | - | chr8_3:60594323-60594342 | Msa1299420:intron | 45.0% | |
| !! | GAGTTTTGGCAGTAGTTCTG+AGG | - | chr8_3:60592897-60592916 | Msa1299420:CDS | 45.0% |
| ATAAACGACTCAGCAGCCAT+TGG | + | chr8_3:60593378-60593397 | None:intergenic | 45.0% | |
| GAGGCTGCTGAATTAGTACA+TGG | - | chr8_3:60593714-60593733 | Msa1299420:intron | 45.0% | |
| GCTGAATTAGTACATGGCCA+AGG | - | chr8_3:60593720-60593739 | Msa1299420:intron | 45.0% | |
| AGCACTAACTCAGCATGTTC+AGG | + | chr8_3:60593747-60593766 | None:intergenic | 45.0% | |
| CCATTGAAGGATGTCTAGCA+TGG | + | chr8_3:60593788-60593807 | None:intergenic | 45.0% | |
| CCATGCTAGACATCCTTCAA+TGG | - | chr8_3:60593785-60593804 | Msa1299420:intron | 45.0% | |
| CTAGACATCCTTCAATGGCT+TGG | - | chr8_3:60593790-60593809 | Msa1299420:intron | 45.0% | |
| GACTGCTAAGGGACATCAAA+TGG | - | chr8_3:60594323-60594342 | Msa1299420:intron | 45.0% | |
| !! | TCATTATTTAAAAATTTATT+AGG | + | chr8_3:60593582-60593601 | None:intergenic | 5.0% |
| !!! | ATTTTTAAACTTATTTTTAT+TGG | - | chr8_3:60594269-60594288 | Msa1299420:intron | 5.0% |
| !! | TCATTATTTAAAAATTTATT+AGG | + | chr8_3:60593582-60593601 | None:intergenic | 5.0% |
| !!! | ATTTTTAAACTTATTTTTAT+TGG | - | chr8_3:60594269-60594288 | Msa1299420:intron | 5.0% |
| ACTCAGCATGTTCAGGTCCT+TGG | + | chr8_3:60593740-60593759 | None:intergenic | 50.0% | |
| ACTCAGCATGTTCAGGTCCT+TGG | + | chr8_3:60593740-60593759 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60592223 | 60594346 | 60592223 | ID=Msa1299420;Name=Msa1299420 |
| chr8_3 | mRNA | 60592223 | 60594346 | 60592223 | ID=Msa1299420-mRNA-1;Parent=Msa1299420;Name=Msa1299420-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0.25|0.25|0|0.5|4|164|88 |
| chr8_3 | exon | 60592223 | 60592443 | 60592223 | ID=Msa1299420-mRNA-1:exon:17747;Parent=Msa1299420-mRNA-1 |
| chr8_3 | exon | 60592808 | 60592965 | 60592808 | ID=Msa1299420-mRNA-1:exon:17746;Parent=Msa1299420-mRNA-1 |
| chr8_3 | exon | 60594017 | 60594062 | 60594017 | ID=Msa1299420-mRNA-1:exon:17745;Parent=Msa1299420-mRNA-1 |
| chr8_3 | exon | 60594341 | 60594346 | 60594341 | ID=Msa1299420-mRNA-1:exon:17744;Parent=Msa1299420-mRNA-1 |
| chr8_3 | CDS | 60594341 | 60594346 | 60594341 | ID=Msa1299420-mRNA-1:cds;Parent=Msa1299420-mRNA-1 |
| chr8_3 | CDS | 60594017 | 60594062 | 60594017 | ID=Msa1299420-mRNA-1:cds;Parent=Msa1299420-mRNA-1 |
| chr8_3 | CDS | 60592808 | 60592965 | 60592808 | ID=Msa1299420-mRNA-1:cds;Parent=Msa1299420-mRNA-1 |
| chr8_3 | CDS | 60592387 | 60592443 | 60592387 | ID=Msa1299420-mRNA-1:cds;Parent=Msa1299420-mRNA-1 |
| chr8_3 | three_prime_UTR | 60592223 | 60592386 | 60592223 | ID=Msa1299420-mRNA-1:three_prime_utr;Parent=Msa1299420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
