AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159590 MtrunA17_Chr1g0171931 97.423 1358 26 3 1 1353 1 1354 0.0 2709
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159590 AT3G57060.1 71.222 1244 332 8 1 1230 1 1232 0.0 1834
Msa0159590 AT3G57060.2 71.222 1244 332 8 1 1230 1 1232 0.0 1832
Msa0159590 AT3G57060.3 71.222 1244 332 8 1 1230 1 1232 0.0 1832

Find 290 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAAAGAAGTTTGCAAAAT+TGG 0.101126 1_4:-30195556 Msa0159590:CDS
TCAAAGCTTTGTAGAAATTT+TGG 0.106400 1_4:-30197190 Msa0159590:CDS
AATAATAGTGTTAGAATATT+TGG 0.138633 1_4:-30197860 Msa0159590:CDS
CAATCTTCTGTTGATGGATT+TGG 0.143554 1_4:+30195445 None:intergenic
ATGTTAGTTGATATCAATTT+TGG 0.153440 1_4:+30200025 None:intergenic
TATCGCAGATATCAGCTTTA+TGG 0.179154 1_4:-30198111 Msa0159590:intron
GCAGAAAAGGAAATTGTTTC+TGG 0.193555 1_4:-30197259 Msa0159590:CDS
ACTTCCATTGTTAGGGAAAT+TGG 0.198161 1_4:-30200133 Msa0159590:CDS
TTTGGCTTCCAGCAAATATT+TGG 0.229758 1_4:-30197811 Msa0159590:CDS
ATCCCTCAGTTCTGTTTATA+AGG 0.231793 1_4:-30197705 Msa0159590:CDS
TCTACAAAGCTTTGACAAAA+AGG 0.237517 1_4:+30197198 None:intergenic
TGCTGTCAATCTTCTGTTGA+TGG 0.244441 1_4:+30195439 None:intergenic
ACAAATGCTTTGTCTATAAA+TGG 0.250566 1_4:-30194160 Msa0159590:CDS
TTACAAGACATCATTGATAT+TGG 0.252982 1_4:-30197980 Msa0159590:CDS
ATGTCAGCTGCTATGATTTC+TGG 0.254360 1_4:+30197737 None:intergenic
GTCTAAAGTTGATCCTTTAC+TGG 0.254602 1_4:-30197945 Msa0159590:CDS
AGGAGATGTTTGTAGGGTTT+TGG 0.257631 1_4:+30201775 None:intergenic
CGGTTCAAAGGACAAGAATT+TGG 0.269747 1_4:-30197236 Msa0159590:CDS
AGTTGGCACACTGGTCTCTA+AGG 0.298241 1_4:-30198813 Msa0159590:CDS
GATAAAATATACCTTCTTAA+TGG 0.298342 1_4:+30196056 None:intergenic
GTATCTTTGACATAATCTTT+TGG 0.300250 1_4:+30200100 None:intergenic
ATAGTTTAATTACTGGCTTT+TGG 0.305867 1_4:-30197829 Msa0159590:CDS
CACAAGGAGTCGTGTGCTTC+AGG 0.306091 1_4:-30199810 Msa0159590:CDS
AACCCGTGCATTCATGGAAT+TGG 0.309115 1_4:-30200567 Msa0159590:CDS
ACCAATGTGAAAGGTGAAAA+AGG 0.309165 1_4:-30193928 Msa0159590:CDS
CTCTTCTGTTGCGTTGGATC+TGG 0.311031 1_4:+30201908 None:intergenic
GAGAGGGAGGAGATGTTTGT+AGG 0.314010 1_4:+30201768 None:intergenic
TCAGGAAGCAAATTATATAT+TGG 0.321717 1_4:+30196153 None:intergenic
AATCTTCTGTTGATGGATTT+GGG 0.324531 1_4:+30195446 None:intergenic
AGTCCATGGTTCTAAAAGAT+TGG 0.329611 1_4:+30196571 None:intergenic
TACAAGACATCATTGATATT+GGG 0.330318 1_4:-30197979 Msa0159590:CDS
GCCTTGCAACTTCCATTGTT+AGG 0.335205 1_4:-30200141 Msa0159590:CDS
TGCAAGACTCAAGAGATTCT+TGG 0.336217 1_4:+30198877 None:intergenic
ATCGCAGATATCAGCTTTAT+GGG 0.340239 1_4:-30198110 Msa0159590:intron
CAGCTATCATTTACTGAAAA+GGG 0.343144 1_4:-30195763 Msa0159590:CDS
TGCAGAAAGATTCATTGTTC+AGG 0.347179 1_4:+30196103 None:intergenic
ATTCGACCGTGTTTACTCTT+TGG 0.348881 1_4:-30201661 Msa0159590:CDS
AGTAGGGTGAACAGCATAAA+TGG 0.350048 1_4:+30197760 None:intergenic
TGTAAGCAATTTCAAATTGA+TGG 0.350648 1_4:-30199239 Msa0159590:CDS
GACATCATTGATATTGGGTT+TGG 0.354628 1_4:-30197974 Msa0159590:CDS
GATGCCCTCTGTCGCATAAT+CGG 0.354852 1_4:-30200298 Msa0159590:CDS
AATATAGACCAATTGATTCA+TGG 0.354885 1_4:+30197586 None:intergenic
TTACCAGGGGCAACATCTTT+CGG 0.364533 1_4:+30199201 None:intergenic
GTGGAGAGTCTTATAAGATT+AGG 0.370785 1_4:-30199979 Msa0159590:CDS
ATTCTCGATAGTTTAATTAC+TGG 0.376639 1_4:-30197836 Msa0159590:CDS
GAGTCGTGTGCTTCAGGTGT+GGG 0.377587 1_4:-30199804 Msa0159590:CDS
TGTTAGGAAGAATGCGGTTC+TGG 0.378556 1_4:-30196510 Msa0159590:CDS
CTAATGTTGATTCGCTTTCA+AGG 0.378765 1_4:-30201557 Msa0159590:CDS
GAATGCTCTTGTAGCTGTGC+TGG 0.379406 1_4:-30199957 Msa0159590:CDS
AGAAACAACCCGTGCATTCA+TGG 0.381429 1_4:-30200573 Msa0159590:CDS
GCTAGCTTTGTGTCGATTGA+TGG 0.385561 1_4:-30196818 Msa0159590:CDS
AGCTTCATTTGAGGCAACTT+TGG 0.388735 1_4:-30199618 Msa0159590:CDS
TTTCTTGAACTTTCCAAGAA+AGG 0.394942 1_4:-30196289 Msa0159590:intron
TCGAAGTCTAATACATCTTC+AGG 0.395081 1_4:-30195378 Msa0159590:intron
TCAGCTATCATTTACTGAAA+AGG 0.396538 1_4:-30195764 Msa0159590:CDS
GGCATTCTTGTTCCTCACTT+TGG 0.397944 1_4:-30200001 Msa0159590:CDS
CAGATATAGAAGTATCTTGT+AGG 0.400444 1_4:+30196531 None:intergenic
TTGATATTGGGTTTGGTCGT+TGG 0.402387 1_4:-30197967 Msa0159590:CDS
GCCTACACTTCTCCAATTGA+TGG 0.403342 1_4:-30199312 Msa0159590:CDS
GTCCATGGTTCTAAAAGATT+GGG 0.405308 1_4:+30196572 None:intergenic
CTTGAAAGCGAATCAACATT+AGG 0.408386 1_4:+30201558 None:intergenic
AAGATACTTCTATATCTGTT+AGG 0.410881 1_4:-30196526 Msa0159590:CDS
AGAGGGAGGAGATGTTTGTA+GGG 0.411154 1_4:+30201769 None:intergenic
CAGAAGATGATGCCATCAAT+TGG 0.413101 1_4:+30199300 None:intergenic
AATGATATAAATGCCGAGTT+AGG 0.414277 1_4:-30197328 Msa0159590:CDS
GTTGTTGTTGTTGTCGTCTT+CGG 0.416482 1_4:+30201809 None:intergenic
TTGTCTTAACCATGGGTGAT+TGG 0.417462 1_4:+30193830 None:intergenic
CAAAACACTAGAAGATGCTT+TGG 0.417679 1_4:+30193891 None:intergenic
GATAATTTGCTAAGTATGTC+AGG 0.420411 1_4:+30196135 None:intergenic
ATGCCCTCTGTCGCATAATC+GGG 0.421216 1_4:-30200297 Msa0159590:CDS
TTTGCGACTTGAACTGTGAT+TGG 0.423041 1_4:+30197644 None:intergenic
TTTAATTGCTTCCATTAAGA+AGG 0.423664 1_4:-30196067 Msa0159590:intron
GCAGCTCTTGAGTTTATAGT+TGG 0.425455 1_4:-30198830 Msa0159590:CDS
CCTTGCAACTTCCATTGTTA+GGG 0.425717 1_4:-30200140 Msa0159590:CDS
CACATGGCCGATGCAGTTGC+TGG 0.429008 1_4:-30200190 Msa0159590:CDS
TTGGTTGCATCGCTTGAGGC+TGG 0.430759 1_4:-30199368 Msa0159590:CDS
TGCTCCAAGTTCCCAACATC+AGG 0.431005 1_4:+30199401 None:intergenic
ACTCGGAGCTGTGGACCAAA+TGG 0.432565 1_4:+30199641 None:intergenic
GAAAGGGTACATTAATGAAA+TGG 0.432956 1_4:-30196365 Msa0159590:CDS
TGTGCCTGATGTTGGGAACT+TGG 0.434082 1_4:-30199405 Msa0159590:CDS
TTGTCTTAACCATGGGTGAC+TGG 0.438592 1_4:+30194053 None:intergenic
GGTCGAATACGTCTTGGTCT+TGG 0.445031 1_4:+30201676 None:intergenic
AGGCAACTTTGGATCAGTAT+AGG 0.447151 1_4:-30199607 Msa0159590:CDS
TTCATTGTTCAGGTTCTGCT+TGG 0.447395 1_4:+30196113 None:intergenic
GCTGCATACCAAATATTTGC+TGG 0.447487 1_4:+30197803 None:intergenic
TGCTTTATCTGTCCTTTGCA+TGG 0.448568 1_4:-30198038 Msa0159590:CDS
ATTGCAGAAGCCTGTAGTTC+TGG 0.449315 1_4:+30196841 None:intergenic
AAAGACAAGTAACCTTCGTC+AGG 0.451756 1_4:+30200463 None:intergenic
TTTGACGAATTCTTCGAGTT+GGG 0.451987 1_4:+30201740 None:intergenic
AGATGAGAGAATTTCAAATC+TGG 0.452166 1_4:-30196323 Msa0159590:CDS
ACCCGTGCATTCATGGAATT+GGG 0.452467 1_4:-30200566 Msa0159590:CDS
CTTGGAGCAGACTAGGGCCT+TGG 0.453032 1_4:-30199387 Msa0159590:CDS
TGGTCATTGATGCAGACTTT+TGG 0.454378 1_4:-30196798 Msa0159590:intron
GAATCTCATTGCAAGCTCAT+TGG 0.454777 1_4:-30200521 Msa0159590:CDS
AGATTCTTGGCAGTTTCCAT+TGG 0.458277 1_4:+30198890 None:intergenic
TGGTTTGTGGAACGAGGTTG+CGG 0.460076 1_4:-30199750 Msa0159590:CDS
CACTAGGAGATTTAGCAGTA+AGG 0.461782 1_4:-30196598 Msa0159590:CDS
TTCGAGTTGGGAGGAGGAGA+GGG 0.463748 1_4:+30201752 None:intergenic
GATTATGTCAAAGATACTAT+TGG 0.464511 1_4:-30200094 Msa0159590:CDS
ATGTTGCAGCATAACCCATT+TGG 0.467413 1_4:-30199656 Msa0159590:CDS
TCAGCTTCTCTTCACAGTTG+TGG 0.467506 1_4:-30196663 Msa0159590:CDS
TCTTCAGTATCCAGAACTAC+AGG 0.468045 1_4:-30196851 Msa0159590:intron
CTTTGACGAATTCTTCGAGT+TGG 0.469018 1_4:+30201739 None:intergenic
AGGTGGTGGCCGCAAGTAGC+AGG 0.472720 1_4:-30200597 Msa0159590:CDS
TTGGGAACTTGGAGCAGACT+AGG 0.473783 1_4:-30199394 Msa0159590:CDS
TCATACAGCCATGAATCAAT+TGG 0.474870 1_4:-30197594 Msa0159590:CDS
GATTCTTGGCAGTTTCCATT+GGG 0.476024 1_4:+30198891 None:intergenic
CTGTGTGGGAAGCGTACCGT+TGG 0.476643 1_4:+30201932 None:intergenic
TCACCCATGGTTAAGACAAC+AGG 0.477158 1_4:-30194049 Msa0159590:intron
ATTCTTGTTCCTCACTTTGG+TGG 0.478327 1_4:-30199998 Msa0159590:CDS
CTAGACGATGCTTCTGGTAC+CGG 0.478614 1_4:+30194121 None:intergenic
TGGCAAATCAAGTTCTAAAC+CGG 0.479958 1_4:-30194140 Msa0159590:CDS
GAGGTTGCGGAAGTTGCTGC+TGG 0.479961 1_4:-30199737 Msa0159590:CDS
ATTAGACTTCGAGTGATCTT+CGG 0.483828 1_4:+30195389 None:intergenic
CTTGTCAGAGGATTCTGTTA+TGG 0.485956 1_4:-30195698 Msa0159590:CDS
ACTCAGTTTCGATTGGTTTG+TGG 0.486591 1_4:-30199763 Msa0159590:CDS
CCACATGGAAAAGAAGGAAC+AGG 0.486777 1_4:-30195487 Msa0159590:CDS
AAGCTATGTAATCGGTTTAG+TGG 0.488771 1_4:-30195939 Msa0159590:CDS
GCTCCGAGTAGCTTCATTTG+AGG 0.488817 1_4:-30199627 Msa0159590:CDS
TGGTGGAAAAGCTATGTAAT+CGG 0.489684 1_4:-30195947 Msa0159590:CDS
AAGACATCAACTGGTGTGCT+TGG 0.489686 1_4:-30198010 Msa0159590:CDS
AGTTCTGTTTATAAGGATTG+TGG 0.492770 1_4:-30197698 Msa0159590:CDS
AGATGACAAGGCAAAATTGT+TGG 0.492878 1_4:-30197885 Msa0159590:CDS
TAAGTTCCACATGGAAAAGA+AGG 0.493192 1_4:-30195493 Msa0159590:CDS
AGCAATGGCACAGCATCAAC+CGG 0.493997 1_4:-30197488 Msa0159590:CDS
CTACGAAATTCAAATGAAAG+TGG 0.494219 1_4:+30201960 None:intergenic
AGTACTACAGGACAGACAAA+TGG 0.495266 1_4:-30195976 Msa0159590:intron
GAGATTCTCTAAATGTATAG+AGG 0.495307 1_4:-30199342 Msa0159590:CDS
TTATAGGAGCTCAACGGTCC+AGG 0.495582 1_4:-30193960 Msa0159590:intron
AATTGTTTCTGGCGGTTCAA+AGG 0.497543 1_4:-30197248 Msa0159590:CDS
AATTCAAATGAAAGTGGAAG+TGG 0.497809 1_4:+30201966 None:intergenic
AAGAGTGCGAGGGAAGATGA+AGG 0.498519 1_4:+30201857 None:intergenic
CTCTGACAAGGCATGTTCAT+AGG 0.498818 1_4:+30195711 None:intergenic
GAAACTTGCAAAAGAGAGAA+AGG 0.502003 1_4:-30197534 Msa0159590:CDS
CACTAGACTGTGTCGTGTAA+TGG 0.507349 1_4:+30200257 None:intergenic
CTCGGAGCTGTGGACCAAAT+GGG 0.508193 1_4:+30199642 None:intergenic
GAAGATGAAGGTTGGAGCCA+TGG 0.509622 1_4:+30201869 None:intergenic
AGTCGTGTGCTTCAGGTGTG+GGG 0.511122 1_4:-30199803 Msa0159590:CDS
CGGAGGGTGAATCTTGTTCG+AGG 0.511388 1_4:+30201829 None:intergenic
TCAAAGGACAAGAATTTGGT+TGG 0.512463 1_4:-30197232 Msa0159590:CDS
AATGCTCTTGTAGCTGTGCT+GGG 0.514061 1_4:-30199956 Msa0159590:CDS
CCCTAACAATGGAAGTTGCA+AGG 0.516451 1_4:+30200140 None:intergenic
CTTTCAGTACAATATACATA+AGG 0.517800 1_4:-30198919 Msa0159590:CDS
GGAAGTTGCTGCTGGGAGAT+TGG 0.517813 1_4:-30199729 Msa0159590:CDS
TAACCTCTTGTCTTAACCAT+GGG 0.517892 1_4:+30193823 None:intergenic
GTCGTGTGCTTCAGGTGTGG+GGG 0.518289 1_4:-30199802 Msa0159590:CDS
AAAGCACTAGACGATGCTTC+TGG 0.518714 1_4:+30194115 None:intergenic
TAATGTTGATTCGCTTTCAA+GGG 0.519008 1_4:-30201556 Msa0159590:CDS
CAAGCTGTCCTTGCCAGTAA+AGG 0.519378 1_4:+30197932 None:intergenic
GAATTCTTCGAGTTGGGAGG+AGG 0.521064 1_4:+30201746 None:intergenic
CTATCACTACCATTCTGCAT+AGG 0.521697 1_4:+30199431 None:intergenic
CGTGTTTACTCTTTGGTTCG+CGG 0.522992 1_4:-30201654 Msa0159590:CDS
ATGGTTGAAAAGACATCAAC+TGG 0.523260 1_4:-30198019 Msa0159590:CDS
TTCGGCACCAGCAACTGCAT+CGG 0.524585 1_4:+30200183 None:intergenic
GTGCGAGGGAAGATGAAGGT+TGG 0.526514 1_4:+30201861 None:intergenic
CTCCCAATTCCATGAATGCA+CGG 0.527441 1_4:+30200564 None:intergenic
ATACAATTCTCTTGTTGATG+AGG 0.528194 1_4:-30199262 Msa0159590:CDS
AGATTCCAACACTGCTCCTA+AGG 0.529288 1_4:-30201424 Msa0159590:intron
ACCACGGCTTTGCTCTGCGG+TGG 0.529418 1_4:+30198060 None:intergenic
AACAATATTAAGAAGAAAGT+AGG 0.529692 1_4:+30201455 None:intergenic
CTGCTATGATTTCTGGAGTA+GGG 0.530319 1_4:+30197744 None:intergenic
ACGCACTAAACAAGCTATGT+TGG 0.530440 1_4:-30199870 Msa0159590:CDS
GATAGTAGTGTGCCTGATGT+TGG 0.531226 1_4:-30199413 Msa0159590:CDS
CTTCGAGTTGGGAGGAGGAG+AGG 0.531303 1_4:+30201751 None:intergenic
ATCAACAGAAGATTGACAGC+AGG 0.531311 1_4:-30195437 Msa0159590:CDS
GCTGCTATGATTTCTGGAGT+AGG 0.532010 1_4:+30197743 None:intergenic
TAAATCAATCTTTGAAGCAG+TGG 0.533578 1_4:-30198948 Msa0159590:CDS
TCATTTCTCTATCAGGTGAA+AGG 0.533590 1_4:-30196382 Msa0159590:intron
TGGAGCCATGGAAGAGAGAG+AGG 0.534757 1_4:+30201881 None:intergenic
GTAATGGTACTTTGTGGAGC+AGG 0.535079 1_4:+30200273 None:intergenic
CAGAAGATTGACAGCAGGGA+AGG 0.535424 1_4:-30195432 Msa0159590:CDS
TATCACTACCATTCTGCATA+GGG 0.536682 1_4:+30199432 None:intergenic
CATTTCTCTATCAGGTGAAA+GGG 0.540050 1_4:-30196381 Msa0159590:intron
GGCCTTGGTTGCATCGCTTG+AGG 0.543570 1_4:-30199372 Msa0159590:CDS
CCTTCCAATTTCCCTAACAA+TGG 0.544985 1_4:+30200129 None:intergenic
GGAACTTAAAACTTACATTG+AGG 0.545490 1_4:-30195535 Msa0159590:CDS
AGCCTCAAGCGATGCAACCA+AGG 0.547090 1_4:+30199370 None:intergenic
AGCTGCTAGATCTCCTGTGT+TGG 0.547805 1_4:+30198847 None:intergenic
ACATACCTTAGGAGCAGTGT+TGG 0.550278 1_4:+30201419 None:intergenic
TGTGTGGGAAGCGTACCGTT+GGG 0.550734 1_4:+30201933 None:intergenic
TCGTGTGCTTCAGGTGTGGG+GGG 0.550787 1_4:-30199801 Msa0159590:CDS
GTAATTGTTACAAGCACTGA+AGG 0.551040 1_4:-30194184 Msa0159590:CDS
GAGGAACACTCAGTTTCGAT+TGG 0.551052 1_4:-30199770 Msa0159590:CDS
GAAAACCTCTCTCTCTTCCA+TGG 0.553200 1_4:-30201886 Msa0159590:exon
TATAGAAGTATCTTGTAGGC+GGG 0.553527 1_4:+30196535 None:intergenic
GATGCAGAGGATTTCTCTGT+CGG 0.554207 1_4:+30201698 None:intergenic
TCATTGTCAGAACCTTCTGA+AGG 0.554412 1_4:+30199563 None:intergenic
AAGCGAGTACGAAGAACATT+CGG 0.554581 1_4:-30199895 Msa0159590:CDS
TAACCTGTTGTCTTAACCAT+GGG 0.555535 1_4:+30194046 None:intergenic
ATTGGGAGCCACAGAGAGCT+CGG 0.555565 1_4:-30200549 Msa0159590:CDS
GGAGTCGTGTGCTTCAGGTG+TGG 0.555573 1_4:-30199805 Msa0159590:CDS
ATTGATTGAATCAGATCAAG+TGG 0.558340 1_4:-30193863 Msa0159590:CDS
TGATTGCACCTTCTGTGTAC+CGG 0.558744 1_4:+30197469 None:intergenic
TTGTTTCTTCCTGCTACTTG+CGG 0.559690 1_4:+30200588 None:intergenic
CATACTAAATGACATGATGA+AGG 0.560185 1_4:-30196474 Msa0159590:intron
GACGAATTCTTCGAGTTGGG+AGG 0.561426 1_4:+30201743 None:intergenic
TACTATTGGTGCTGAAAATG+TGG 0.561961 1_4:-30200080 Msa0159590:CDS
TGCATGAAAACATACTGTGC+TGG 0.562212 1_4:+30198778 None:intergenic
GGACAGACAAATGGAAGCAC+TGG 0.562649 1_4:-30195967 Msa0159590:CDS
AAAGAGCTTGAGCCTTCAGA+AGG 0.562863 1_4:-30199575 Msa0159590:CDS
ATAGTAGTGTGCCTGATGTT+GGG 0.563989 1_4:-30199412 Msa0159590:CDS
TGAGTTTATAGTTGGCACAC+TGG 0.565695 1_4:-30198822 Msa0159590:CDS
AGTTGCTGCTGGGAGATTGG+AGG 0.565849 1_4:-30199726 Msa0159590:CDS
TTCGATTGGTTTGTGGAACG+AGG 0.566074 1_4:-30199756 Msa0159590:CDS
AAGTTGATCCTTTACTGGCA+AGG 0.566127 1_4:-30197940 Msa0159590:CDS
GCCATCAATTGGAGAAGTGT+AGG 0.569020 1_4:+30199311 None:intergenic
CTTGTGAATAAGATGCATGA+TGG 0.571692 1_4:+30200231 None:intergenic
GTTGTTGTTGTCGTCTTCGG+AGG 0.572001 1_4:+30201812 None:intergenic
ATTAAAACAACCAATGTGAA+AGG 0.576043 1_4:-30193937 Msa0159590:CDS
TTGTTGTTGTCGTCTTCGGA+GGG 0.577154 1_4:+30201813 None:intergenic
CTCTACAGATGTCAGACAGT+GGG 0.577605 1_4:-30195809 Msa0159590:intron
CTAACCTCTTGTCTTAACCA+TGG 0.577710 1_4:+30193822 None:intergenic
CAGACAAATGGAAGCACTGG+TGG 0.578868 1_4:-30195964 Msa0159590:CDS
GTTGGCACACTGGTCTCTAA+GGG 0.581531 1_4:-30198812 Msa0159590:CDS
TGCGTTGGATCTGGTCTGTG+TGG 0.582202 1_4:+30201917 None:intergenic
GCCGAAAAGAAGTATTCAGA+TGG 0.583200 1_4:-30200166 Msa0159590:CDS
TCTCCGAAAGATGTTGCCCC+TGG 0.583816 1_4:-30199204 Msa0159590:intron
TGGGAACTTGGAGCAGACTA+GGG 0.584083 1_4:-30199393 Msa0159590:CDS
TCCCAATTCCATGAATGCAC+GGG 0.584659 1_4:+30200565 None:intergenic
GGCCCCGATTATGCGACAGA+GGG 0.586679 1_4:+30200294 None:intergenic
AATCGGTTTAGTGGTGTCAC+AGG 0.586732 1_4:-30195930 Msa0159590:intron
GAGTTGGGAGGAGGAGAGGG+AGG 0.588726 1_4:+30201755 None:intergenic
CAGAAAGCCTCTCGATAGCA+AGG 0.588973 1_4:+30197909 None:intergenic
TCTAATTGCACTATTGCACT+AGG 0.589127 1_4:-30196614 Msa0159590:CDS
CGTCTTGGTCTTGGATGCAG+AGG 0.590940 1_4:+30201685 None:intergenic
ATCCTTATAAACAGAACTGA+GGG 0.592079 1_4:+30197703 None:intergenic
CCATTGTTAGGGAAATTGGA+AGG 0.592278 1_4:-30200129 Msa0159590:CDS
GACTGATACATTCATGTCAC+AGG 0.592694 1_4:-30199468 Msa0159590:CDS
GCGTTGGATCTGGTCTGTGT+GGG 0.594688 1_4:+30201918 None:intergenic
GATGCAATCCCTATGCAGAA+TGG 0.596545 1_4:-30199440 Msa0159590:CDS
TGTCGTGTAATGGTACTTTG+TGG 0.598438 1_4:+30200267 None:intergenic
TTGCCTCAAATGAAGCTACT+CGG 0.602139 1_4:+30199624 None:intergenic
AAGAGAGAAAGGACATTGAG+AGG 0.603969 1_4:-30197523 Msa0159590:CDS
AGGTTGCGGAAGTTGCTGCT+GGG 0.606891 1_4:-30199736 Msa0159590:CDS
AAATTGATATCAACTAACAT+TGG 0.608940 1_4:-30200022 Msa0159590:CDS
TTGGAGAAGTGTAGGCATTG+TGG 0.609998 1_4:+30199319 None:intergenic
AGCATCAACCGGTACACAGA+AGG 0.612351 1_4:-30197477 Msa0159590:intron
CATAACAGAATCCTCTGACA+AGG 0.612594 1_4:+30195699 None:intergenic
CTATGAACATGCCTTGTCAG+AGG 0.613866 1_4:-30195710 Msa0159590:CDS
CAGCTTGCCTTGCTATCGAG+AGG 0.614048 1_4:-30197916 Msa0159590:CDS
TTGAAGCTGTTGAGAAGGAG+CGG 0.615411 1_4:-30199502 Msa0159590:CDS
CGCGAACCAAAGAGTAAACA+CGG 0.616453 1_4:+30201655 None:intergenic
TCACCCATGGTTAAGACAAG+AGG 0.616547 1_4:-30193826 Msa0159590:CDS
TCTGTTTATAAGGATTGTGG+TGG 0.617980 1_4:-30197695 Msa0159590:CDS
CTTGCAACTGATTCCAACAC+AGG 0.619910 1_4:-30198860 Msa0159590:CDS
GAAAAGGAAATTGTTTCTGG+CGG 0.619917 1_4:-30197256 Msa0159590:CDS
AATGAAGCTACTCGGAGCTG+TGG 0.620295 1_4:+30199632 None:intergenic
TCGAGGTGTTGAAGAGTGCG+AGG 0.621611 1_4:+30201846 None:intergenic
AGAGGCTGCAAATCCTAACT+CGG 0.622462 1_4:+30197315 None:intergenic
TCAACAGAAGATTGACAGCA+GGG 0.622646 1_4:-30195436 Msa0159590:CDS
CAACTCGAAGAATTCGTCAA+AGG 0.623065 1_4:-30201738 Msa0159590:CDS
ACTATTGGTGCTGAAAATGT+GGG 0.623216 1_4:-30200079 Msa0159590:CDS
AAACACGGTCGAATACGTCT+TGG 0.624885 1_4:+30201670 None:intergenic
AAACTCTAACGTGGATGGTG+AGG 0.626136 1_4:-30199540 Msa0159590:CDS
CTAACCTGTTGTCTTAACCA+TGG 0.626289 1_4:+30194045 None:intergenic
AGCTATCATTTACTGAAAAG+GGG 0.626387 1_4:-30195762 Msa0159590:CDS
GGTTCATCTGACCCTGACGA+AGG 0.627950 1_4:-30200475 Msa0159590:CDS
GTGCAATAGTGCAATTAGAA+CGG 0.629695 1_4:+30196618 None:intergenic
ATATAGAAGTATCTTGTAGG+CGG 0.631163 1_4:+30196534 None:intergenic
GTTAGGATTTGCAGCCTCTG+AGG 0.631609 1_4:-30197311 Msa0159590:CDS
AGCACCACGGCTTTGCTCTG+CGG 0.632576 1_4:+30198057 None:intergenic
AGGCCCCGATTATGCGACAG+AGG 0.637694 1_4:+30200293 None:intergenic
TTCAGTATCCGAGCTCTCTG+TGG 0.638208 1_4:+30200541 None:intergenic
TGCCCTCTGTCGCATAATCG+GGG 0.638428 1_4:-30200296 Msa0159590:CDS
GTTGGAATCTTTCAAAAGCG+CGG 0.642116 1_4:+30200327 None:intergenic
TATTGAAGTCCAATCACCCA+TGG 0.644418 1_4:-30193839 Msa0159590:CDS
GAATTTCGTAGTTAACCCAA+CGG 0.646181 1_4:-30201948 Msa0159590:five_prime_UTR
TATTGAAGTCCAGTCACCCA+TGG 0.647530 1_4:-30194062 Msa0159590:CDS
CAGCAACTGCATCGGCCATG+TGG 0.647912 1_4:+30200191 None:intergenic
CGAGGTGTTGAAGAGTGCGA+GGG 0.649241 1_4:+30201847 None:intergenic
AATCCTTATAAACAGAACTG+AGG 0.650673 1_4:+30197702 None:intergenic
ACCACCGCAGAGCAAAGCCG+TGG 0.651933 1_4:-30198061 Msa0159590:CDS
TAAGACTCTCCACCAAAGTG+AGG 0.651984 1_4:+30199989 None:intergenic
TATATCTGTTAGGAAGAATG+CGG 0.652410 1_4:-30196516 Msa0159590:CDS
AGGCAGAGTACAGACAGCAA+TGG 0.655449 1_4:-30197503 Msa0159590:CDS
ATGCTCTTGTAGCTGTGCTG+GGG 0.660356 1_4:-30199955 Msa0159590:CDS
GGGATGTTTCTGCTTACACA+AGG 0.662146 1_4:-30199826 Msa0159590:CDS
AATGAAAACTCTAACGTGGA+TGG 0.662520 1_4:-30199545 Msa0159590:CDS
GAGGCTTTCTGAAGATGACA+AGG 0.668391 1_4:-30197897 Msa0159590:CDS
TGACAATGAAAACTCTAACG+TGG 0.672314 1_4:-30199549 Msa0159590:CDS
TTGAACGAAGACTTTCAACA+AGG 0.673816 1_4:+30201598 None:intergenic
AAGACAAGTAACCTTCGTCA+GGG 0.675567 1_4:+30200464 None:intergenic
TAAGCTGAATAAGTTCCACA+TGG 0.680330 1_4:-30195502 Msa0159590:CDS
ATCAAGTGCAGCATCCTCAG+AGG 0.688166 1_4:+30197297 None:intergenic
TCTCTACAGATGTCAGACAG+TGG 0.689804 1_4:-30195810 Msa0159590:intron
TAATTGTTACAAGCACTGAA+GGG 0.692138 1_4:-30194183 Msa0159590:CDS
TGCCAATTATAGGAGCTCAA+CGG 0.696052 1_4:-30193966 Msa0159590:intron
CATTACGATGAGAAGCAACA+CGG 0.700562 1_4:+30201493 None:intergenic
CTATTGGTGCTGAAAATGTG+GGG 0.723034 1_4:-30200078 Msa0159590:CDS
AAAGGACAGATAAAGCACCA+CGG 0.791205 1_4:+30198044 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTAATTTGTAATATTAT+AGG - chr1_4:30194459-30194478 Msa0159590:intron 10.0%
!! ACAAATTAAAAAATTAATTG+TGG + chr1_4:30194660-30194679 None:intergenic 10.0%
!!! TTGAAATTTTAAATATGATT+TGG - chr1_4:30197421-30197440 Msa0159590:intron 10.0%
!! AAATTAAACAAGAAAATAAA+AGG + chr1_4:30200193-30200212 None:intergenic 10.0%
!! AAATAGATATATTATATTTG+AGG - chr1_4:30200658-30200677 Msa0159590:intron 10.0%
!! AATAGATATATTATATTTGA+GGG - chr1_4:30200659-30200678 Msa0159590:intron 10.0%
!! ATTTGTAATATTATAGGTTA+AGG - chr1_4:30194465-30194484 Msa0159590:intron 15.0%
!! AATTAAAAAATTAATTGTGG+AGG + chr1_4:30194657-30194676 None:intergenic 15.0%
!!! AAGATTTTACGATAAATTTT+AGG - chr1_4:30194694-30194713 Msa0159590:intron 15.0%
!!! TATATTTTATACCTAGAATT+AGG - chr1_4:30197096-30197115 Msa0159590:intron 15.0%
!! TCATGTTTGTAAAAAAATAT+AGG + chr1_4:30197233-30197252 None:intergenic 15.0%
!! TTAAATATTTGATGTAAACA+AGG - chr1_4:30197360-30197379 Msa0159590:intron 15.0%
!! AAAATTTCAATTTGAAAACT+GGG + chr1_4:30197411-30197430 None:intergenic 15.0%
!! TAAAATTTCAATTTGAAAAC+TGG + chr1_4:30197412-30197431 None:intergenic 15.0%
!! AATAATAGTGTTAGAATATT+TGG - chr1_4:30197928-30197947 Msa0159590:CDS 15.0%
!! AACATCTTCATTTAATTATA+AGG + chr1_4:30199074-30199093 None:intergenic 15.0%
!! ACTGTTTGTATTTAAAAAAA+GGG + chr1_4:30199895-30199914 None:intergenic 15.0%
!! AACTGTTTGTATTTAAAAAA+AGG + chr1_4:30199896-30199915 None:intergenic 15.0%
!!! TTTTAGAAACATATTAAACA+AGG - chr1_4:30200117-30200136 Msa0159590:CDS 15.0%
!!! TTATGTTTTAAATTGAAATC+AGG - chr1_4:30200211-30200230 Msa0159590:CDS 15.0%
!! ATAATATATCTATTTACAGT+TGG + chr1_4:30200653-30200672 None:intergenic 15.0%
!! ACATTGGAAAAAATTTATAA+TGG - chr1_4:30201290-30201309 Msa0159590:intron 15.0%
!! CATTGGAAAAAATTTATAAT+GGG - chr1_4:30201291-30201310 Msa0159590:intron 15.0%
!! AACAATATTAAGAAGAAAGT+AGG + chr1_4:30194336-30194355 None:intergenic 20.0%
!! AGAACGAAAAAGTAAATTAA+AGG + chr1_4:30194428-30194447 None:intergenic 20.0%
!!! AAATCAATTTTGTATACTTG+TGG - chr1_4:30194584-30194603 Msa0159590:intron 20.0%
!!! AAACATGTCAAAATCAATTT+TGG + chr1_4:30194615-30194634 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr1_4:30194614-30194633 Msa0159590:intron 20.0%
!!! AAACATGTCAAAATCAATTT+TGG + chr1_4:30194615-30194634 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr1_4:30194614-30194633 Msa0159590:intron 20.0%
!! GTAAAGTGATTATTAATGTT+CGG + chr1_4:30194966-30194985 None:intergenic 20.0%
!!! ATAAACCTTGAATTACTTTT+TGG - chr1_4:30195292-30195311 Msa0159590:intron 20.0%
!! GTTAACAAAATTAAGAAAGA+AGG + chr1_4:30195374-30195393 None:intergenic 20.0%
!!! TAATTTTGTTAACACTAAAC+AGG - chr1_4:30195381-30195400 Msa0159590:CDS 20.0%
!!! TTGATATCAATTTTGGAATA+CGG + chr1_4:30195759-30195778 None:intergenic 20.0%
!!! ATGTTAGTTGATATCAATTT+TGG + chr1_4:30195766-30195785 None:intergenic 20.0%
!! AAATTGATATCAACTAACAT+TGG - chr1_4:30195766-30195785 Msa0159590:CDS 20.0%
!! TGAAATTTATTCTTTCTTTC+TGG - chr1_4:30196784-30196803 Msa0159590:intron 20.0%
!! CTGTCAAATTCTTATAAATT+TGG - chr1_4:30198416-30198435 Msa0159590:intron 20.0%
!!! AAGATAGTTCATTTTTATGA+AGG + chr1_4:30198661-30198680 None:intergenic 20.0%
!! GATAAAATATACCTTCTTAA+TGG + chr1_4:30199735-30199754 None:intergenic 20.0%
!! CTGTTTGTATTTAAAAAAAG+GGG + chr1_4:30199894-30199913 None:intergenic 20.0%
!! TTAAGTAGTTTATGTGAAAA+TGG - chr1_4:30200161-30200180 Msa0159590:CDS 20.0%
!!! TCTTAAACTTTAAAATGTTC+CGG - chr1_4:30200439-30200458 Msa0159590:intron 20.0%
!!! AATTTTTATCATCTAGCATA+TGG - chr1_4:30200703-30200722 Msa0159590:intron 20.0%
!! TTTGTAATTAATCCTTTGAT+AGG + chr1_4:30200960-30200979 None:intergenic 20.0%
!! TTAATAACGATTTATCATGT+AGG + chr1_4:30201325-30201344 None:intergenic 20.0%
!! ACATGATAAATCGTTATTAA+TGG - chr1_4:30201325-30201344 Msa0159590:intron 20.0%
!! AGAAAAAAATATGATGTTGA+GGG - chr1_4:30201472-30201491 Msa0159590:CDS 20.0%
!!! ATGTCTAGTTTTACTTCTAA+TGG - chr1_4:30194783-30194802 Msa0159590:intron 25.0%
!!! TGTCTAGTTTTACTTCTAAT+GGG - chr1_4:30194784-30194803 Msa0159590:intron 25.0%
! ATGAACCAAAAAGTAATTCA+AGG + chr1_4:30195300-30195319 None:intergenic 25.0%
!! GTATCTTTGACATAATCTTT+TGG + chr1_4:30195691-30195710 None:intergenic 25.0%
! GATTATGTCAAAGATACTAT+TGG - chr1_4:30195694-30195713 Msa0159590:CDS 25.0%
!!! AAAGCTTTTAAGGATATTGA+TGG - chr1_4:30195868-30195887 Msa0159590:intron 25.0%
!! AAATTTTACTTGAGAGATGT+AGG - chr1_4:30195941-30195960 Msa0159590:CDS 25.0%
!! AATTTTACTTGAGAGATGTA+GGG - chr1_4:30195942-30195961 Msa0159590:CDS 25.0%
! TGTAAGCAATTTCAAATTGA+TGG - chr1_4:30196549-30196568 Msa0159590:CDS 25.0%
! TTAGACAATAGAAAGAACTA+CGG + chr1_4:30196614-30196633 None:intergenic 25.0%
! CTTTCAGTACAATATACATA+AGG - chr1_4:30196869-30196888 Msa0159590:intron 25.0%
!! ATGCCTCTAAATTTTTCTTT+AGG - chr1_4:30197071-30197090 Msa0159590:intron 25.0%
! AGTCCTAAAGAAAAATTTAG+AGG + chr1_4:30197077-30197096 None:intergenic 25.0%
!! AGAAGTGTAAACTTGAAAAT+TGG + chr1_4:30197167-30197186 None:intergenic 25.0%
! ACACTTCTATATTTCATTTC+TGG - chr1_4:30197179-30197198 Msa0159590:CDS 25.0%
! CACTTCTATATTTCATTTCT+GGG - chr1_4:30197180-30197199 Msa0159590:CDS 25.0%
! ACTTCTATATTTCATTTCTG+GGG - chr1_4:30197181-30197200 Msa0159590:CDS 25.0%
!! AATATGATTTGGAATGAGAT+TGG - chr1_4:30197432-30197451 Msa0159590:intron 25.0%
!! CTCTCTTATTTGAATTAGTA+CGG - chr1_4:30197559-30197578 Msa0159590:CDS 25.0%
!! TCTCTTATTTGAATTAGTAC+GGG - chr1_4:30197560-30197579 Msa0159590:CDS 25.0%
! CATCAACAATTTATTGACAT+AGG + chr1_4:30197601-30197620 None:intergenic 25.0%
! TTACAAGACATCATTGATAT+TGG - chr1_4:30197808-30197827 Msa0159590:CDS 25.0%
! TACAAGACATCATTGATATT+GGG - chr1_4:30197809-30197828 Msa0159590:CDS 25.0%
! ATTCTCGATAGTTTAATTAC+TGG - chr1_4:30197952-30197971 Msa0159590:CDS 25.0%
!!! ATAGTTTAATTACTGGCTTT+TGG - chr1_4:30197959-30197978 Msa0159590:CDS 25.0%
!! AATATAGACCAATTGATTCA+TGG + chr1_4:30198205-30198224 None:intergenic 25.0%
! AATGTTTGAAAAAGCAGAAA+AGG - chr1_4:30198516-30198535 Msa0159590:intron 25.0%
!!! TCAAAGCTTTGTAGAAATTT+TGG - chr1_4:30198598-30198617 Msa0159590:intron 25.0%
!!! ATAGTTCATTTTTATGAAGG+AGG + chr1_4:30198658-30198677 None:intergenic 25.0%
! CTTTATATATGATGCTTTCA+CGG - chr1_4:30198864-30198883 Msa0159590:CDS 25.0%
! TATAAGGCATAGATAAACTA+GGG + chr1_4:30199058-30199077 None:intergenic 25.0%
! TTATAAGGCATAGATAAACT+AGG + chr1_4:30199059-30199078 None:intergenic 25.0%
! AAGATACTTCTATATCTGTT+AGG - chr1_4:30199262-30199281 Msa0159590:CDS 25.0%
!! AAAGCACTACAAAATTGAAA+GGG + chr1_4:30199373-30199392 None:intergenic 25.0%
!! TAAAGCACTACAAAATTGAA+AGG + chr1_4:30199374-30199393 None:intergenic 25.0%
! TTATAAGGAAAAACCTTTCT+TGG + chr1_4:30199515-30199534 None:intergenic 25.0%
!! TTGCGATATTACATTTTTCA+AGG - chr1_4:30199567-30199586 Msa0159590:CDS 25.0%
!!! GATATTACATTTTTCAAGGT+AGG - chr1_4:30199571-30199590 Msa0159590:CDS 25.0%
! TCAGGAAGCAAATTATATAT+TGG + chr1_4:30199638-30199657 None:intergenic 25.0%
! TTTAATTGCTTCCATTAAGA+AGG - chr1_4:30199721-30199740 Msa0159590:CDS 25.0%
! ATGAGCAGTTGTTATAAATA+AGG + chr1_4:30199936-30199955 None:intergenic 25.0%
! ATATAAAAAATGCACTCAAG+GGG + chr1_4:30200520-30200539 None:intergenic 25.0%
! GATATAAAAAATGCACTCAA+GGG + chr1_4:30200521-30200540 None:intergenic 25.0%
! GATATATTATATTTGAGGGT+AGG - chr1_4:30200663-30200682 Msa0159590:intron 25.0%
! TGATAGGAAGCTAATATTTA+TGG + chr1_4:30201085-30201104 None:intergenic 25.0%
! AATAATGTTCAAAAGTAGCT+TGG + chr1_4:30201142-30201161 None:intergenic 25.0%
!!! ATTTTTTCCAATGTCTTGTT+TGG + chr1_4:30201284-30201303 None:intergenic 25.0%
! TGATAAATCGTTATTAATGG+TGG - chr1_4:30201328-30201347 Msa0159590:intron 25.0%
! GAGAAAAAAATATGATGTTG+AGG - chr1_4:30201471-30201490 Msa0159590:CDS 25.0%
! ACAAATGCTTTGTCTATAAA+TGG - chr1_4:30201628-30201647 Msa0159590:CDS 25.0%
! ATTAAAACAACCAATGTGAA+AGG - chr1_4:30201851-30201870 Msa0159590:CDS 25.0%
AATTCAAATGAAAGTGGAAG+TGG + chr1_4:30193825-30193844 None:intergenic 30.0%
CTACGAAATTCAAATGAAAG+TGG + chr1_4:30193831-30193850 None:intergenic 30.0%
!! TAATGTTGATTCGCTTTCAA+GGG - chr1_4:30194232-30194251 Msa0159590:intron 30.0%
! TCAATTTTGTATACTTGTGG+AGG - chr1_4:30194587-30194606 Msa0159590:intron 30.0%
TTAAATGCGTTTGACATTAC+TGG - chr1_4:30194757-30194776 Msa0159590:intron 30.0%
!!! GTCTAGTTTTACTTCTAATG+GGG - chr1_4:30194785-30194804 Msa0159590:intron 30.0%
! TCCATCTGAATACTTCTTTT+CGG + chr1_4:30195626-30195645 None:intergenic 30.0%
! GCTAGTATCAAAAGCTTTTA+AGG - chr1_4:30195858-30195877 Msa0159590:intron 30.0%
GAGATTCTCTAAATGTATAG+AGG - chr1_4:30196446-30196465 Msa0159590:intron 30.0%
ATACAATTCTCTTGTTGATG+AGG - chr1_4:30196526-30196545 Msa0159590:CDS 30.0%
GTTCTTTCTATTGTCTAACA+AGG - chr1_4:30196616-30196635 Msa0159590:CDS 30.0%
TTGTCTAACAAGGATATTCA+AGG - chr1_4:30196626-30196645 Msa0159590:CDS 30.0%
!! TAAATCAATCTTTGAAGCAG+TGG - chr1_4:30196840-30196859 Msa0159590:CDS 30.0%
ATACATAAGGAAAAACCCAA+TGG - chr1_4:30196882-30196901 Msa0159590:intron 30.0%
!! TTAGGAATCTGACTGTTTTT+AGG - chr1_4:30197114-30197133 Msa0159590:intron 30.0%
ATTTGGCATTTGACATAACT+AGG + chr1_4:30197275-30197294 None:intergenic 30.0%
TAAACATAAAACGTGTACGT+TGG - chr1_4:30197502-30197521 Msa0159590:CDS 30.0%
AAACATAAAACGTGTACGTT+GGG - chr1_4:30197503-30197522 Msa0159590:CDS 30.0%
TGATGTCATCATATTGAGTT+TGG - chr1_4:30197616-30197635 Msa0159590:CDS 30.0%
!!! TTGAGTTTGGTTTTCATCAT+TGG - chr1_4:30197629-30197648 Msa0159590:CDS 30.0%
! GATTTCTTTTGCTTCAATGT+TGG - chr1_4:30197700-30197719 Msa0159590:CDS 30.0%
ATCCTTATAAACAGAACTGA+GGG + chr1_4:30198088-30198107 None:intergenic 30.0%
AATCCTTATAAACAGAACTG+AGG + chr1_4:30198089-30198108 None:intergenic 30.0%
AGTTCTGTTTATAAGGATTG+TGG - chr1_4:30198090-30198109 Msa0159590:CDS 30.0%
TTGGCTTATTAATGTGTTGT+AGG - chr1_4:30198435-30198454 Msa0159590:intron 30.0%
AATGATATAAATGCCGAGTT+AGG - chr1_4:30198460-30198479 Msa0159590:intron 30.0%
! TCTACAAAGCTTTGACAAAA+AGG + chr1_4:30198593-30198612 None:intergenic 30.0%
!! TCATTTTTATGAAGGAGGAA+TGG + chr1_4:30198653-30198672 None:intergenic 30.0%
GTATAATGAGTGACTGTATA+TGG - chr1_4:30198731-30198750 Msa0159590:intron 30.0%
ACCATCACTTACATTTGAAA+TGG - chr1_4:30198756-30198775 Msa0159590:intron 30.0%
! CCATCACTTACATTTGAAAT+GGG - chr1_4:30198757-30198776 Msa0159590:intron 30.0%
TAAACTAGGGAGAGAAATTT+AGG + chr1_4:30199045-30199064 None:intergenic 30.0%
!! ATATAGAAGTATCTTGTAGG+CGG + chr1_4:30199257-30199276 None:intergenic 30.0%
!! CAGATATAGAAGTATCTTGT+AGG + chr1_4:30199260-30199279 None:intergenic 30.0%
TATATCTGTTAGGAAGAATG+CGG - chr1_4:30199272-30199291 Msa0159590:CDS 30.0%
CATACTAAATGACATGATGA+AGG - chr1_4:30199314-30199333 Msa0159590:CDS 30.0%
! GAAAGGGTACATTAATGAAA+TGG - chr1_4:30199423-30199442 Msa0159590:CDS 30.0%
AGATGAGAGAATTTCAAATC+TGG - chr1_4:30199465-30199484 Msa0159590:CDS 30.0%
TTTCTTGAACTTTCCAAGAA+AGG - chr1_4:30199499-30199518 Msa0159590:CDS 30.0%
!!! TTACATTTTTCAAGGTAGGA+AGG - chr1_4:30199575-30199594 Msa0159590:CDS 30.0%
!! GATAATTTGCTAAGTATGTC+AGG + chr1_4:30199656-30199675 None:intergenic 30.0%
! TCTAGTTTCTTAAGTACTAC+AGG - chr1_4:30199800-30199819 Msa0159590:CDS 30.0%
TCAGCTATCATTTACTGAAA+AGG - chr1_4:30200024-30200043 Msa0159590:CDS 30.0%
CAGCTATCATTTACTGAAAA+GGG - chr1_4:30200025-30200044 Msa0159590:CDS 30.0%
AGCTATCATTTACTGAAAAG+GGG - chr1_4:30200026-30200045 Msa0159590:CDS 30.0%
GGAACTTAAAACTTACATTG+AGG - chr1_4:30200253-30200272 Msa0159590:CDS 30.0%
!! AATCTTCTGTTGATGGATTT+GGG + chr1_4:30200345-30200364 None:intergenic 30.0%
GAAAGCAGAAACTATAAAAC+CGG + chr1_4:30200461-30200480 None:intergenic 30.0%
CGATATAAAAAATGCACTCA+AGG + chr1_4:30200522-30200541 None:intergenic 30.0%
! TTTATGCTTTTCACTTCTGT+TGG - chr1_4:30200592-30200611 Msa0159590:CDS 30.0%
! TTTTACAAACCAACGGAAAA+CGG - chr1_4:30200738-30200757 Msa0159590:intron 30.0%
ATCCTTTGATAGGAAGTTAA+GGG + chr1_4:30200950-30200969 None:intergenic 30.0%
AATCCTTTGATAGGAAGTTA+AGG + chr1_4:30200951-30200970 None:intergenic 30.0%
!! AGTATAAACAGCAAGTTGAT+AGG + chr1_4:30201101-30201120 None:intergenic 30.0%
TATACCTTCTTTCAGAATTG+TGG - chr1_4:30201171-30201190 Msa0159590:intron 30.0%
! AATACCACAATTCTGAAAGA+AGG + chr1_4:30201178-30201197 None:intergenic 30.0%
!!! ACTTGCACACATTTTTAAGT+AGG + chr1_4:30201236-30201255 None:intergenic 30.0%
ATTTGTCAGTACATTCTTGA+TGG + chr1_4:30201365-30201384 None:intergenic 30.0%
TTGATAAATTGTGAGTGGAT+TGG + chr1_4:30201389-30201408 None:intergenic 30.0%
! AATATGCTACATGATTTTGC+TGG - chr1_4:30201431-30201450 Msa0159590:CDS 30.0%
! TGATGTTGAGGGATTTTATT+TGG - chr1_4:30201483-30201502 Msa0159590:CDS 30.0%
!! TAATTGTTACAAGCACTGAA+GGG - chr1_4:30201605-30201624 Msa0159590:CDS 30.0%
ATTGATTGAATCAGATCAAG+TGG - chr1_4:30201702-30201721 Msa0159590:CDS 30.0%
GAATTTCGTAGTTAACCCAA+CGG - chr1_4:30193840-30193859 Msa0159590:CDS 35.0%
! TTTGACGAATTCTTCGAGTT+GGG + chr1_4:30194051-30194070 None:intergenic 35.0%
TTGAACGAAGACTTTCAACA+AGG + chr1_4:30194193-30194212 None:intergenic 35.0%
CTTGAAAGCGAATCAACATT+AGG + chr1_4:30194233-30194252 None:intergenic 35.0%
!! CTAATGTTGATTCGCTTTCA+AGG - chr1_4:30194231-30194250 Msa0159590:intron 35.0%
TAACGAACCAAACATACCTT+AGG + chr1_4:30194383-30194402 None:intergenic 35.0%
TGTCAACAGCTATTAATGTC+TGG + chr1_4:30194541-30194560 None:intergenic 35.0%
CAAGTAGAATCAATTGTGGA+AGG + chr1_4:30194861-30194880 None:intergenic 35.0%
GCTTCAAGTAGAATCAATTG+TGG + chr1_4:30194865-30194884 None:intergenic 35.0%
CTACTTGAAGCTAGAAATTG+AGG - chr1_4:30194874-30194893 Msa0159590:intron 35.0%
ATAATCACTTTACCTTCGAC+TGG - chr1_4:30194973-30194992 Msa0159590:intron 35.0%
TTCAAACACATTGTTTCGAC+AGG - chr1_4:30195067-30195086 Msa0159590:intron 35.0%
ACCATGCTTCAAACTAAATG+GGG + chr1_4:30195158-30195177 None:intergenic 35.0%
CACCATGCTTCAAACTAAAT+GGG + chr1_4:30195159-30195178 None:intergenic 35.0%
ACACCATGCTTCAAACTAAA+TGG + chr1_4:30195160-30195179 None:intergenic 35.0%
GAATGCATTTCTACAACAAG+TGG + chr1_4:30195425-30195444 None:intergenic 35.0%
CTTGTGAATAAGATGCATGA+TGG + chr1_4:30195560-30195579 None:intergenic 35.0%
ACTTCCATTGTTAGGGAAAT+TGG - chr1_4:30195655-30195674 Msa0159590:intron 35.0%
!! TACTATTGGTGCTGAAAATG+TGG - chr1_4:30195708-30195727 Msa0159590:CDS 35.0%
!! ACTATTGGTGCTGAAAATGT+GGG - chr1_4:30195709-30195728 Msa0159590:CDS 35.0%
! GTGGAGAGTCTTATAAGATT+AGG - chr1_4:30195809-30195828 Msa0159590:intron 35.0%
TGACAATGAAAACTCTAACG+TGG - chr1_4:30196239-30196258 Msa0159590:intron 35.0%
AATGAAAACTCTAACGTGGA+TGG - chr1_4:30196243-30196262 Msa0159590:intron 35.0%
!!! GAATTTTGAAGCTGTTGAGA+AGG - chr1_4:30196281-30196300 Msa0159590:intron 35.0%
TATCACTACCATTCTGCATA+GGG + chr1_4:30196359-30196378 None:intergenic 35.0%
TTATGTAGTCGTTGCTTCAA+TGG - chr1_4:30196650-30196669 Msa0159590:CDS 35.0%
! CACAGTATGTTTTCATGCAT+CGG - chr1_4:30197014-30197033 Msa0159590:intron 35.0%
ACAGTCAGATTCCTAATTCT+AGG + chr1_4:30197110-30197129 None:intergenic 35.0%
! CTCAGTGCATTTATCTTTTC+AGG + chr1_4:30197140-30197159 None:intergenic 35.0%
CTGAAAAGATAAATGCACTG+AGG - chr1_4:30197138-30197157 Msa0159590:intron 35.0%
ATGCCAAATGTCAATCCATA+CGG - chr1_4:30197286-30197305 Msa0159590:CDS 35.0%
! TTACCGTATGGATTGACATT+TGG + chr1_4:30197292-30197311 None:intergenic 35.0%
TATCGCAGATATCAGCTTTA+TGG - chr1_4:30197677-30197696 Msa0159590:CDS 35.0%
! ATCGCAGATATCAGCTTTAT+GGG - chr1_4:30197678-30197697 Msa0159590:CDS 35.0%
! TTCTTTTGCTTCAATGTTGG+TGG - chr1_4:30197703-30197722 Msa0159590:CDS 35.0%
! ATGTCTTTTCAACCATGCAA+AGG + chr1_4:30197765-30197784 None:intergenic 35.0%
ATGGTTGAAAAGACATCAAC+TGG - chr1_4:30197769-30197788 Msa0159590:CDS 35.0%
GACATCATTGATATTGGGTT+TGG - chr1_4:30197814-30197833 Msa0159590:CDS 35.0%
! GTCTAAAGTTGATCCTTTAC+TGG - chr1_4:30197843-30197862 Msa0159590:CDS 35.0%
AGATGACAAGGCAAAATTGT+TGG - chr1_4:30197903-30197922 Msa0159590:CDS 35.0%
! TTTGGCTTCCAGCAAATATT+TGG - chr1_4:30197977-30197996 Msa0159590:CDS 35.0%
ATCCCTCAGTTCTGTTTATA+AGG - chr1_4:30198083-30198102 Msa0159590:CDS 35.0%
TCTGTTTATAAGGATTGTGG+TGG - chr1_4:30198093-30198112 Msa0159590:CDS 35.0%
TCATACAGCCATGAATCAAT+TGG - chr1_4:30198194-30198213 Msa0159590:intron 35.0%
GAAACTTGCAAAAGAGAGAA+AGG - chr1_4:30198254-30198273 Msa0159590:intron 35.0%
GCAGAAAAGGAAATTGTTTC+TGG - chr1_4:30198529-30198548 Msa0159590:intron 35.0%
!! GAAAAGGAAATTGTTTCTGG+CGG - chr1_4:30198532-30198551 Msa0159590:intron 35.0%
TCAAAGGACAAGAATTTGGT+TGG - chr1_4:30198556-30198575 Msa0159590:intron 35.0%
! AAATTTTGGACTACTGCAGA+AGG - chr1_4:30198612-30198631 Msa0159590:intron 35.0%
! GTACTGATCTGTTCATGATT+TGG - chr1_4:30198688-30198707 Msa0159590:intron 35.0%
CCCATTTCAAATGTAAGTGA+TGG + chr1_4:30198760-30198779 None:intergenic 35.0%
!! AGTTCTGGATACTGAAGAAA+TGG + chr1_4:30198935-30198954 None:intergenic 35.0%
! GGAGAGAAATTTAGGATAAG+AGG + chr1_4:30199037-30199056 None:intergenic 35.0%
GTGCAATAGTGCAATTAGAA+CGG + chr1_4:30199173-30199192 None:intergenic 35.0%
TCTAATTGCACTATTGCACT+AGG - chr1_4:30199174-30199193 Msa0159590:intron 35.0%
!!! TTCCCAATCTTTTAGAACCA+TGG - chr1_4:30199214-30199233 Msa0159590:CDS 35.0%
!! GTCCATGGTTCTAAAAGATT+GGG + chr1_4:30199219-30199238 None:intergenic 35.0%
!! AGTCCATGGTTCTAAAAGAT+TGG + chr1_4:30199220-30199239 None:intergenic 35.0%
!!! GCATACATTTTTTCAGTCCA+TGG + chr1_4:30199234-30199253 None:intergenic 35.0%
!! TATAGAAGTATCTTGTAGGC+GGG + chr1_4:30199256-30199275 None:intergenic 35.0%
TCATTTCTCTATCAGGTGAA+AGG - chr1_4:30199406-30199425 Msa0159590:CDS 35.0%
CATTTCTCTATCAGGTGAAA+GGG - chr1_4:30199407-30199426 Msa0159590:CDS 35.0%
!! GAAGGTATTTAATAGTCTCC+TGG - chr1_4:30199593-30199612 Msa0159590:CDS 35.0%
TGCAGAAAGATTCATTGTTC+AGG + chr1_4:30199688-30199707 None:intergenic 35.0%
TGGTGGAAAAGCTATGTAAT+CGG - chr1_4:30199841-30199860 Msa0159590:CDS 35.0%
! AAGCTATGTAATCGGTTTAG+TGG - chr1_4:30199849-30199868 Msa0159590:CDS 35.0%
GGCAAAGAAGTTTGCAAAAT+TGG - chr1_4:30200232-30200251 Msa0159590:CDS 35.0%
TAAGCTGAATAAGTTCCACA+TGG - chr1_4:30200286-30200305 Msa0159590:CDS 35.0%
TAAGTTCCACATGGAAAAGA+AGG - chr1_4:30200295-30200314 Msa0159590:CDS 35.0%
!! CAATCTTCTGTTGATGGATT+TGG + chr1_4:30200346-30200365 None:intergenic 35.0%
ATTAGACTTCGAGTGATCTT+CGG + chr1_4:30200402-30200421 None:intergenic 35.0%
TCGAAGTCTAATACATCTTC+AGG - chr1_4:30200410-30200429 Msa0159590:intron 35.0%
! CAGAAGTGAAAAGCATAAAC+AGG + chr1_4:30200591-30200610 None:intergenic 35.0%
TATATTTGAGGGTAGGTTTG+TGG - chr1_4:30200670-30200689 Msa0159590:intron 35.0%
!!! ATGCTGCTTTTACAAACCAA+CGG - chr1_4:30200731-30200750 Msa0159590:intron 35.0%
! AAATGATAACCGTTTTCCGT+TGG + chr1_4:30200750-30200769 None:intergenic 35.0%
AGATTCTATCTCAAGTACTC+TGG + chr1_4:30200775-30200794 None:intergenic 35.0%
GTACTTGAGATAGAATCTAC+TGG - chr1_4:30200777-30200796 Msa0159590:intron 35.0%
AACCCCATTTCATCATTCTT+TGG + chr1_4:30200812-30200831 None:intergenic 35.0%
CTCTGAATCTACTTGATTGA+AGG + chr1_4:30200843-30200862 None:intergenic 35.0%
GTAGATTCAGAGACTAAGAA+CGG - chr1_4:30200851-30200870 Msa0159590:intron 35.0%
! ACTCAGTCTTGTAAGTAGTA+AGG + chr1_4:30200902-30200921 None:intergenic 35.0%
TCCTTTGATAGGAAGTTAAG+GGG + chr1_4:30200949-30200968 None:intergenic 35.0%
CCTCTTTGATAAATTGTGAG+TGG + chr1_4:30201394-30201413 None:intergenic 35.0%
CCACTCACAATTTATCAAAG+AGG - chr1_4:30201391-30201410 Msa0159590:intron 35.0%
GGTCATGTAGTTTCTCAATT+TGG - chr1_4:30201504-30201523 Msa0159590:CDS 35.0%
! TTTTCTGCAGATGAAGTAGA+TGG - chr1_4:30201577-30201596 Msa0159590:CDS 35.0%
!! GTAATTGTTACAAGCACTGA+AGG - chr1_4:30201604-30201623 Msa0159590:CDS 35.0%
!! TGGCAAATCAAGTTCTAAAC+CGG - chr1_4:30201648-30201667 Msa0159590:CDS 35.0%
TAACCTGTTGTCTTAACCAT+GGG + chr1_4:30201745-30201764 None:intergenic 35.0%
AACATGATGCTGCCAATTAT+AGG - chr1_4:30201812-30201831 Msa0159590:CDS 35.0%
!!! CACATTGGTTGTTTTAATCC+TGG + chr1_4:30201849-30201868 None:intergenic 35.0%
ACCAATGTGAAAGGTGAAAA+AGG - chr1_4:30201860-30201879 Msa0159590:CDS 35.0%
!! ACCTTTTTCACCTTTCACAT+TGG + chr1_4:30201864-30201883 None:intergenic 35.0%
CAAAACACTAGAAGATGCTT+TGG + chr1_4:30201900-30201919 None:intergenic 35.0%
TAACCTCTTGTCTTAACCAT+GGG + chr1_4:30201968-30201987 None:intergenic 35.0%
! GTTGTTGTTGTTGTCGTCTT+CGG + chr1_4:30193982-30194001 None:intergenic 40.0%
!!! GATGTTTGTAGGGTTTTGGA+CGG + chr1_4:30194012-30194031 None:intergenic 40.0%
! AGGAGATGTTTGTAGGGTTT+TGG + chr1_4:30194016-30194035 None:intergenic 40.0%
CTTTGACGAATTCTTCGAGT+TGG + chr1_4:30194052-30194071 None:intergenic 40.0%
CAACTCGAAGAATTCGTCAA+AGG - chr1_4:30194050-30194069 Msa0159590:CDS 40.0%
ATTCGACCGTGTTTACTCTT+TGG - chr1_4:30194127-30194146 Msa0159590:CDS 40.0%
CATTACGATGAGAAGCAACA+CGG + chr1_4:30194298-30194317 None:intergenic 40.0%
TATAGCTAAAAGCCAGTCGA+AGG + chr1_4:30194988-30195007 None:intergenic 40.0%
!! TCCCCATTTAGTTTGAAGCA+TGG - chr1_4:30195154-30195173 Msa0159590:intron 40.0%
! GTTTGAAGCATGGTGTATTG+CGG - chr1_4:30195164-30195183 Msa0159590:intron 40.0%
! TTGTTTCTTCCTGCTACTTG+CGG + chr1_4:30195203-30195222 None:intergenic 40.0%
GAATCTCATTGCAAGCTCAT+TGG - chr1_4:30195267-30195286 Msa0159590:intron 40.0%
AAGACAAGTAACCTTCGTCA+GGG + chr1_4:30195327-30195346 None:intergenic 40.0%
AAAGACAAGTAACCTTCGTC+AGG + chr1_4:30195328-30195347 None:intergenic 40.0%
GTTGGAATCTTTCAAAAGCG+CGG + chr1_4:30195464-30195483 None:intergenic 40.0%
TGTCGTGTAATGGTACTTTG+TGG + chr1_4:30195524-30195543 None:intergenic 40.0%
!! TGATTTTGTTGTCGTCCACA+TGG - chr1_4:30195582-30195601 Msa0159590:intron 40.0%
!! GCCGAAAAGAAGTATTCAGA+TGG - chr1_4:30195622-30195641 Msa0159590:intron 40.0%
CCTTGCAACTTCCATTGTTA+GGG - chr1_4:30195648-30195667 Msa0159590:intron 40.0%
CCTTCCAATTTCCCTAACAA+TGG + chr1_4:30195662-30195681 None:intergenic 40.0%
CCATTGTTAGGGAAATTGGA+AGG - chr1_4:30195659-30195678 Msa0159590:intron 40.0%
!! CTATTGGTGCTGAAAATGTG+GGG - chr1_4:30195710-30195729 Msa0159590:CDS 40.0%
ATTCTTGTTCCTCACTTTGG+TGG - chr1_4:30195790-30195809 Msa0159590:CDS 40.0%
AAGCGAGTACGAAGAACATT+CGG - chr1_4:30195893-30195912 Msa0159590:intron 40.0%
ACGCACTAAACAAGCTATGT+TGG - chr1_4:30195918-30195937 Msa0159590:intron 40.0%
!! ACTCAGTTTCGATTGGTTTG+TGG - chr1_4:30196025-30196044 Msa0159590:intron 40.0%
ATGTTGCAGCATAACCCATT+TGG - chr1_4:30196132-30196151 Msa0159590:CDS 40.0%
TTGCCTCAAATGAAGCTACT+CGG + chr1_4:30196167-30196186 None:intergenic 40.0%
! AGCTTCATTTGAGGCAACTT+TGG - chr1_4:30196170-30196189 Msa0159590:intron 40.0%
AGGCAACTTTGGATCAGTAT+AGG - chr1_4:30196181-30196200 Msa0159590:intron 40.0%
TCATTGTCAGAACCTTCTGA+AGG + chr1_4:30196228-30196247 None:intergenic 40.0%
GACTGATACATTCATGTCAC+AGG - chr1_4:30196320-30196339 Msa0159590:CDS 40.0%
CTATCACTACCATTCTGCAT+AGG + chr1_4:30196360-30196379 None:intergenic 40.0%
ATAGTAGTGTGCCTGATGTT+GGG - chr1_4:30196376-30196395 Msa0159590:intron 40.0%
CAGAAGATGATGCCATCAAT+TGG + chr1_4:30196491-30196510 None:intergenic 40.0%
! CTTCAATGGACAAGTTGGAA+TGG - chr1_4:30196664-30196683 Msa0159590:CDS 40.0%
CTTAAACAGACAGGGTTACA+TGG + chr1_4:30196701-30196720 None:intergenic 40.0%
!! TCCATCGACTTAAACAGACA+GGG + chr1_4:30196709-30196728 None:intergenic 40.0%
!! ATCCATCGACTTAAACAGAC+AGG + chr1_4:30196710-30196729 None:intergenic 40.0%
! TTCTTTCTGGCATTTGCTCT+CGG - chr1_4:30196797-30196816 Msa0159590:intron 40.0%
GATTCTTGGCAGTTTCCATT+GGG + chr1_4:30196900-30196919 None:intergenic 40.0%
AGATTCTTGGCAGTTTCCAT+TGG + chr1_4:30196901-30196920 None:intergenic 40.0%
TGCAAGACTCAAGAGATTCT+TGG + chr1_4:30196914-30196933 None:intergenic 40.0%
GCAGCTCTTGAGTTTATAGT+TGG - chr1_4:30196958-30196977 Msa0159590:intron 40.0%
TGAGTTTATAGTTGGCACAC+TGG - chr1_4:30196966-30196985 Msa0159590:intron 40.0%
TGCATGAAAACATACTGTGC+TGG + chr1_4:30197013-30197032 None:intergenic 40.0%
! CACTGAACTGTTTTACCGTA+TGG + chr1_4:30197304-30197323 None:intergenic 40.0%
CATACGGTAAAACAGTTCAG+TGG - chr1_4:30197302-30197321 Msa0159590:CDS 40.0%
AGGACTCAGATTGTTTATGC+TGG - chr1_4:30197530-30197549 Msa0159590:CDS 40.0%
CAGATTGTTTATGCTGGCAA+TGG - chr1_4:30197536-30197555 Msa0159590:CDS 40.0%
AAAGCTGATATCTGCGATAG+TGG + chr1_4:30197676-30197695 None:intergenic 40.0%
! AAAGGACAGATAAAGCACCA+CGG + chr1_4:30197747-30197766 None:intergenic 40.0%
TGCTTTATCTGTCCTTTGCA+TGG - chr1_4:30197750-30197769 Msa0159590:CDS 40.0%
! TTGATATTGGGTTTGGTCGT+TGG - chr1_4:30197821-30197840 Msa0159590:CDS 40.0%
! AAGTTGATCCTTTACTGGCA+AGG - chr1_4:30197848-30197867 Msa0159590:CDS 40.0%
GCTGCATACCAAATATTTGC+TGG + chr1_4:30197988-30198007 None:intergenic 40.0%
AGTAGGGTGAACAGCATAAA+TGG + chr1_4:30198031-30198050 None:intergenic 40.0%
!! CTGCTATGATTTCTGGAGTA+GGG + chr1_4:30198047-30198066 None:intergenic 40.0%
ATGTCAGCTGCTATGATTTC+TGG + chr1_4:30198054-30198073 None:intergenic 40.0%
TTTGCGACTTGAACTGTGAT+TGG + chr1_4:30198147-30198166 None:intergenic 40.0%
AAGAGAGAAAGGACATTGAG+AGG - chr1_4:30198265-30198284 Msa0159590:intron 40.0%
!! AATTGTTTCTGGCGGTTCAA+AGG - chr1_4:30198540-30198559 Msa0159590:intron 40.0%
CGGTTCAAAGGACAAGAATT+TGG - chr1_4:30198552-30198571 Msa0159590:intron 40.0%
TCTTCAGTATCCAGAACTAC+AGG - chr1_4:30198937-30198956 Msa0159590:CDS 40.0%
! TGGTCATTGATGCAGACTTT+TGG - chr1_4:30198990-30199009 Msa0159590:intron 40.0%
CACTAGGAGATTTAGCAGTA+AGG - chr1_4:30199190-30199209 Msa0159590:intron 40.0%
TGATGCGTCATTTCTCTATC+AGG - chr1_4:30199399-30199418 Msa0159590:CDS 40.0%
TTGTTTCCTGTTGTAATGCC+AGG + chr1_4:30199614-30199633 None:intergenic 40.0%
! TTCATTGTTCAGGTTCTGCT+TGG + chr1_4:30199678-30199697 None:intergenic 40.0%
AGTACTACAGGACAGACAAA+TGG - chr1_4:30199812-30199831 Msa0159590:CDS 40.0%
CATAACAGAATCCTCTGACA+AGG + chr1_4:30200092-30200111 None:intergenic 40.0%
CTTGTCAGAGGATTCTGTTA+TGG - chr1_4:30200090-30200109 Msa0159590:CDS 40.0%
TGCTGTCAATCTTCTGTTGA+TGG + chr1_4:30200352-30200371 None:intergenic 40.0%
ATCAACAGAAGATTGACAGC+AGG - chr1_4:30200351-30200370 Msa0159590:CDS 40.0%
TCAACAGAAGATTGACAGCA+GGG - chr1_4:30200352-30200371 Msa0159590:CDS 40.0%
AAAAAATGCACTCAAGGGGA+AGG + chr1_4:30200516-30200535 None:intergenic 40.0%
! AGGGTAGGTTTGTGGTATTT+TGG - chr1_4:30200678-30200697 Msa0159590:intron 40.0%
GATAGAATCTACTGGTACGA+CGG - chr1_4:30200785-30200804 Msa0159590:intron 40.0%
ATAGAATCTACTGGTACGAC+GGG - chr1_4:30200786-30200805 Msa0159590:intron 40.0%
GGGCCAAAGAATGATGAAAT+GGG - chr1_4:30200806-30200825 Msa0159590:intron 40.0%
GGCCAAAGAATGATGAAATG+GGG - chr1_4:30200807-30200826 Msa0159590:intron 40.0%
TCCCCTTAACTTCCTATCAA+AGG - chr1_4:30200945-30200964 Msa0159590:intron 40.0%
! TTTATGGAAGTGTGTGTCGA+GGG + chr1_4:30201069-30201088 None:intergenic 40.0%
! ATTTATGGAAGTGTGTGTCG+AGG + chr1_4:30201070-30201089 None:intergenic 40.0%
CTAACCTGTTGTCTTAACCA+TGG + chr1_4:30201746-30201765 None:intergenic 40.0%
AAACACAGCTGTTGTGAATC+TGG - chr1_4:30201769-30201788 Msa0159590:CDS 40.0%
TGCCAATTATAGGAGCTCAA+CGG - chr1_4:30201822-30201841 Msa0159590:CDS 40.0%
TATTGAAGTCCAATCACCCA+TGG - chr1_4:30201949-30201968 Msa0159590:five_prime_UTR 40.0%
TTGTCTTAACCATGGGTGAT+TGG + chr1_4:30201961-30201980 None:intergenic 40.0%
CTAACCTCTTGTCTTAACCA+TGG + chr1_4:30201969-30201988 None:intergenic 40.0%
! GGTTTTCTCTTCTGTTGCGT+TGG + chr1_4:30193889-30193908 None:intergenic 45.0%
GAAAACCTCTCTCTCTTCCA+TGG - chr1_4:30193902-30193921 Msa0159590:CDS 45.0%
! TTGTTGTTGTCGTCTTCGGA+GGG + chr1_4:30193978-30193997 None:intergenic 45.0%
AGAGGGAGGAGATGTTTGTA+GGG + chr1_4:30194022-30194041 None:intergenic 45.0%
GATGCAGAGGATTTCTCTGT+CGG + chr1_4:30194093-30194112 None:intergenic 45.0%
AAACACGGTCGAATACGTCT+TGG + chr1_4:30194121-30194140 None:intergenic 45.0%
CGCGAACCAAAGAGTAAACA+CGG + chr1_4:30194136-30194155 None:intergenic 45.0%
! CGTGTTTACTCTTTGGTTCG+CGG - chr1_4:30194134-30194153 Msa0159590:CDS 45.0%
AGATTCCAACACTGCTCCTA+AGG - chr1_4:30194364-30194383 Msa0159590:intron 45.0%
ACATACCTTAGGAGCAGTGT+TGG + chr1_4:30194372-30194391 None:intergenic 45.0%
CACTGCTCCTAAGGTATGTT+TGG - chr1_4:30194373-30194392 Msa0159590:intron 45.0%
AGAAACAACCCGTGCATTCA+TGG - chr1_4:30195215-30195234 Msa0159590:intron 45.0%
AACCCGTGCATTCATGGAAT+TGG - chr1_4:30195221-30195240 Msa0159590:intron 45.0%
ACCCGTGCATTCATGGAATT+GGG - chr1_4:30195222-30195241 Msa0159590:intron 45.0%
TCCCAATTCCATGAATGCAC+GGG + chr1_4:30195226-30195245 None:intergenic 45.0%
CTCCCAATTCCATGAATGCA+CGG + chr1_4:30195227-30195246 None:intergenic 45.0%
! AAGCGCGGCATTTTCAAACA+TGG + chr1_4:30195449-30195468 None:intergenic 45.0%
!!! ACAGAGGGCATCTTTTGAGT+TGG + chr1_4:30195482-30195501 None:intergenic 45.0%
GTAATGGTACTTTGTGGAGC+AGG + chr1_4:30195518-30195537 None:intergenic 45.0%
CACTAGACTGTGTCGTGTAA+TGG + chr1_4:30195534-30195553 None:intergenic 45.0%
GCCTTGCAACTTCCATTGTT+AGG - chr1_4:30195647-30195666 Msa0159590:intron 45.0%
CCCTAACAATGGAAGTTGCA+AGG + chr1_4:30195651-30195670 None:intergenic 45.0%
!! AAATGTGGGGCGTTTTCTTG+TGG - chr1_4:30195723-30195742 Msa0159590:CDS 45.0%
GGCATTCTTGTTCCTCACTT+TGG - chr1_4:30195787-30195806 Msa0159590:CDS 45.0%
TAAGACTCTCCACCAAAGTG+AGG + chr1_4:30195802-30195821 None:intergenic 45.0%
AATGCTCTTGTAGCTGTGCT+GGG - chr1_4:30195832-30195851 Msa0159590:intron 45.0%
! GGGATGTTTCTGCTTACACA+AGG - chr1_4:30195962-30195981 Msa0159590:CDS 45.0%
GAGGAACACTCAGTTTCGAT+TGG - chr1_4:30196018-30196037 Msa0159590:intron 45.0%
!! TTCGATTGGTTTGTGGAACG+AGG - chr1_4:30196032-30196051 Msa0159590:intron 45.0%
AAAGAGCTTGAGCCTTCAGA+AGG - chr1_4:30196213-30196232 Msa0159590:intron 45.0%
AAACTCTAACGTGGATGGTG+AGG - chr1_4:30196248-30196267 Msa0159590:intron 45.0%
TTGAAGCTGTTGAGAAGGAG+CGG - chr1_4:30196286-30196305 Msa0159590:intron 45.0%
GATGCAATCCCTATGCAGAA+TGG - chr1_4:30196348-30196367 Msa0159590:CDS 45.0%
GATAGTAGTGTGCCTGATGT+TGG - chr1_4:30196375-30196394 Msa0159590:intron 45.0%
! TTGGAGAAGTGTAGGCATTG+TGG + chr1_4:30196472-30196491 None:intergenic 45.0%
GCCTACACTTCTCCAATTGA+TGG - chr1_4:30196476-30196495 Msa0159590:CDS 45.0%
! GCCATCAATTGGAGAAGTGT+AGG + chr1_4:30196480-30196499 None:intergenic 45.0%
TTACCAGGGGCAACATCTTT+CGG + chr1_4:30196590-30196609 None:intergenic 45.0%
AAAGAACTACGGCTTACCAG+GGG + chr1_4:30196603-30196622 None:intergenic 45.0%
GAAAGAACTACGGCTTACCA+GGG + chr1_4:30196604-30196623 None:intergenic 45.0%
AGAAAGAACTACGGCTTACC+AGG + chr1_4:30196605-30196624 None:intergenic 45.0%
CGTTGCTTCAATGGACAAGT+TGG - chr1_4:30196659-30196678 Msa0159590:CDS 45.0%
ACCCTGTCTGTTTAAGTCGA+TGG - chr1_4:30196705-30196724 Msa0159590:intron 45.0%
! TCGGTTGTAGGCATTTTCTC+AGG - chr1_4:30196816-30196835 Msa0159590:CDS 45.0%
! CTTGCAACTGATTCCAACAC+AGG - chr1_4:30196928-30196947 Msa0159590:intron 45.0%
AAACGTGTACGTTGGGAAGT+AGG - chr1_4:30197510-30197529 Msa0159590:CDS 45.0%
AAGACATCAACTGGTGTGCT+TGG - chr1_4:30197778-30197797 Msa0159590:CDS 45.0%
! GAGGCTTTCTGAAGATGACA+AGG - chr1_4:30197891-30197910 Msa0159590:CDS 45.0%
!! GCTGCTATGATTTCTGGAGT+AGG + chr1_4:30198048-30198067 None:intergenic 45.0%
TGATTGCACCTTCTGTGTAC+CGG + chr1_4:30198322-30198341 None:intergenic 45.0%
AGAGGCTGCAAATCCTAACT+CGG + chr1_4:30198476-30198495 None:intergenic 45.0%
ATTGCAGAAGCCTGTAGTTC+TGG + chr1_4:30198950-30198969 None:intergenic 45.0%
!! GCTAGCTTTGTGTCGATTGA+TGG - chr1_4:30198970-30198989 Msa0159590:intron 45.0%
TCAGCTTCTCTTCACAGTTG+TGG - chr1_4:30199125-30199144 Msa0159590:intron 45.0%
TGTTAGGAAGAATGCGGTTC+TGG - chr1_4:30199278-30199297 Msa0159590:CDS 45.0%
TAGTCTCCTGGCATTACAAC+AGG - chr1_4:30199605-30199624 Msa0159590:CDS 45.0%
!! AATCGGTTTAGTGGTGTCAC+AGG - chr1_4:30199858-30199877 Msa0159590:CDS 45.0%
TCTCTACAGATGTCAGACAG+TGG - chr1_4:30199978-30199997 Msa0159590:CDS 45.0%
CTCTACAGATGTCAGACAGT+GGG - chr1_4:30199979-30199998 Msa0159590:CDS 45.0%
CTCTGACAAGGCATGTTCAT+AGG + chr1_4:30200080-30200099 None:intergenic 45.0%
CTATGAACATGCCTTGTCAG+AGG - chr1_4:30200078-30200097 Msa0159590:CDS 45.0%
! CCTGTTCCTTCTTTTCCATG+TGG + chr1_4:30200304-30200323 None:intergenic 45.0%
CCACATGGAAAAGAAGGAAC+AGG - chr1_4:30200301-30200320 Msa0159590:CDS 45.0%
CGGGCCAAAGAATGATGAAA+TGG - chr1_4:30200805-30200824 Msa0159590:intron 45.0%
! TTATGGAAGTGTGTGTCGAG+GGG + chr1_4:30201068-30201087 None:intergenic 45.0%
TGCTGCACCAAACAAGACAT+TGG - chr1_4:30201274-30201293 Msa0159590:intron 45.0%
! AAAGCACTAGACGATGCTTC+TGG + chr1_4:30201676-30201695 None:intergenic 45.0%
TATTGAAGTCCAGTCACCCA+TGG - chr1_4:30201726-30201745 Msa0159590:CDS 45.0%
TTGTCTTAACCATGGGTGAC+TGG + chr1_4:30201738-30201757 None:intergenic 45.0%
TCACCCATGGTTAAGACAAC+AGG - chr1_4:30201739-30201758 Msa0159590:CDS 45.0%
GACCGTTGAGCTCCTATAAT+TGG + chr1_4:30201827-30201846 None:intergenic 45.0%
TCACCCATGGTTAAGACAAG+AGG - chr1_4:30201962-30201981 Msa0159590:five_prime_UTR 45.0%
!!! TTTTTAATTTGTAATATTAT+AGG - chr1_4:30194668-30194687 Msa0159590:intron 5.0%
!! TATACAAAAATAAAATTATA+AGG + chr1_4:30199530-30199549 None:intergenic 5.0%
CTCTTCTGTTGCGTTGGATC+TGG + chr1_4:30193883-30193902 None:intergenic 50.0%
GAAGATGAAGGTTGGAGCCA+TGG + chr1_4:30193922-30193941 None:intergenic 50.0%
! AAGAGTGCGAGGGAAGATGA+AGG + chr1_4:30193934-30193953 None:intergenic 50.0%
! GTTGTTGTTGTCGTCTTCGG+AGG + chr1_4:30193979-30193998 None:intergenic 50.0%
GAGAGGGAGGAGATGTTTGT+AGG + chr1_4:30194023-30194042 None:intergenic 50.0%
!! GAATTCTTCGAGTTGGGAGG+AGG + chr1_4:30194045-30194064 None:intergenic 50.0%
!! GACGAATTCTTCGAGTTGGG+AGG + chr1_4:30194048-30194067 None:intergenic 50.0%
GGTCGAATACGTCTTGGTCT+TGG + chr1_4:30194115-30194134 None:intergenic 50.0%
GCATGGTGTATTGCGGTTTC+AGG - chr1_4:30195171-30195190 Msa0159590:intron 50.0%
TGGTGTATTGCGGTTTCAGG+TGG - chr1_4:30195174-30195193 Msa0159590:intron 50.0%
! TGTATTGCGGTTTCAGGTGG+TGG - chr1_4:30195177-30195196 Msa0159590:intron 50.0%
TTCAGTATCCGAGCTCTCTG+TGG + chr1_4:30195250-30195269 None:intergenic 50.0%
GATGCCCTCTGTCGCATAAT+CGG - chr1_4:30195490-30195509 Msa0159590:CDS 50.0%
ATGCCCTCTGTCGCATAATC+GGG - chr1_4:30195491-30195510 Msa0159590:CDS 50.0%
GAATGCTCTTGTAGCTGTGC+TGG - chr1_4:30195831-30195850 Msa0159590:intron 50.0%
ATGCTCTTGTAGCTGTGCTG+GGG - chr1_4:30195833-30195852 Msa0159590:intron 50.0%
! TGGTTTGTGGAACGAGGTTG+CGG - chr1_4:30196038-30196057 Msa0159590:intron 50.0%
AATGAAGCTACTCGGAGCTG+TGG + chr1_4:30196159-30196178 None:intergenic 50.0%
GCTCCGAGTAGCTTCATTTG+AGG - chr1_4:30196161-30196180 Msa0159590:CDS 50.0%
TGTGCCTGATGTTGGGAACT+TGG - chr1_4:30196383-30196402 Msa0159590:intron 50.0%
TGCTCCAAGTTCCCAACATC+AGG + chr1_4:30196390-30196409 None:intergenic 50.0%
TTGGGAACTTGGAGCAGACT+AGG - chr1_4:30196394-30196413 Msa0159590:intron 50.0%
TGGGAACTTGGAGCAGACTA+GGG - chr1_4:30196395-30196414 Msa0159590:intron 50.0%
TGGCATTTGCTCTCGGTTGT+AGG - chr1_4:30196804-30196823 Msa0159590:CDS 50.0%
AGCTGCTAGATCTCCTGTGT+TGG + chr1_4:30196944-30196963 None:intergenic 50.0%
! AGTTGGCACACTGGTCTCTA+AGG - chr1_4:30196975-30196994 Msa0159590:intron 50.0%
! GTTGGCACACTGGTCTCTAA+GGG - chr1_4:30196976-30196995 Msa0159590:intron 50.0%
CAAGCTGTCCTTGCCAGTAA+AGG + chr1_4:30197859-30197878 None:intergenic 50.0%
CAGAAAGCCTCTCGATAGCA+AGG + chr1_4:30197882-30197901 None:intergenic 50.0%
AGGCAGAGTACAGACAGCAA+TGG - chr1_4:30198285-30198304 Msa0159590:intron 50.0%
AGCAATGGCACAGCATCAAC+CGG - chr1_4:30198300-30198319 Msa0159590:intron 50.0%
AGCATCAACCGGTACACAGA+AGG - chr1_4:30198311-30198330 Msa0159590:intron 50.0%
GTTAGGATTTGCAGCCTCTG+AGG - chr1_4:30198477-30198496 Msa0159590:intron 50.0%
ATCAAGTGCAGCATCCTCAG+AGG + chr1_4:30198494-30198513 None:intergenic 50.0%
! GGACAGACAAATGGAAGCAC+TGG - chr1_4:30199821-30199840 Msa0159590:CDS 50.0%
!! CAGACAAATGGAAGCACTGG+TGG - chr1_4:30199824-30199843 Msa0159590:CDS 50.0%
CAGAAGATTGACAGCAGGGA+AGG - chr1_4:30200356-30200375 Msa0159590:CDS 50.0%
GGGGAGCTAGTTAGCTAGTT+GGG + chr1_4:30200930-30200949 None:intergenic 50.0%
AGGGGAGCTAGTTAGCTAGT+TGG + chr1_4:30200931-30200950 None:intergenic 50.0%
AGGGTGTGGGTAACTGATTG+GGG + chr1_4:30201021-30201040 None:intergenic 50.0%
! GAGGGTGTGGGTAACTGATT+GGG + chr1_4:30201022-30201041 None:intergenic 50.0%
! AAGTGTGTGTCGAGGGGTAT+TGG + chr1_4:30201062-30201081 None:intergenic 50.0%
CTAGACGATGCTTCTGGTAC+CGG + chr1_4:30201670-30201689 None:intergenic 50.0%
TTATAGGAGCTCAACGGTCC+AGG - chr1_4:30201828-30201847 Msa0159590:CDS 50.0%
! TGTGTGGGAAGCGTACCGTT+GGG + chr1_4:30193858-30193877 None:intergenic 55.0%
GCGTTGGATCTGGTCTGTGT+GGG + chr1_4:30193873-30193892 None:intergenic 55.0%
TGCGTTGGATCTGGTCTGTG+TGG + chr1_4:30193874-30193893 None:intergenic 55.0%
TGGAGCCATGGAAGAGAGAG+AGG + chr1_4:30193910-30193929 None:intergenic 55.0%
GTGCGAGGGAAGATGAAGGT+TGG + chr1_4:30193930-30193949 None:intergenic 55.0%
!! CGAGGTGTTGAAGAGTGCGA+GGG + chr1_4:30193944-30193963 None:intergenic 55.0%
!! TCGAGGTGTTGAAGAGTGCG+AGG + chr1_4:30193945-30193964 None:intergenic 55.0%
CGGAGGGTGAATCTTGTTCG+AGG + chr1_4:30193962-30193981 None:intergenic 55.0%
!! TTCGAGTTGGGAGGAGGAGA+GGG + chr1_4:30194039-30194058 None:intergenic 55.0%
!! CGTCTTGGTCTTGGATGCAG+AGG + chr1_4:30194106-30194125 None:intergenic 55.0%
ATTGGGAGCCACAGAGAGCT+CGG - chr1_4:30195239-30195258 Msa0159590:intron 55.0%
GGTTCATCTGACCCTGACGA+AGG - chr1_4:30195313-30195332 Msa0159590:intron 55.0%
TGCCCTCTGTCGCATAATCG+GGG - chr1_4:30195492-30195511 Msa0159590:CDS 55.0%
TTCGGCACCAGCAACTGCAT+CGG + chr1_4:30195608-30195627 None:intergenic 55.0%
CACAAGGAGTCGTGTGCTTC+AGG - chr1_4:30195978-30195997 Msa0159590:intron 55.0%
GAGTCGTGTGCTTCAGGTGT+GGG - chr1_4:30195984-30196003 Msa0159590:intron 55.0%
AGTCGTGTGCTTCAGGTGTG+GGG - chr1_4:30195985-30196004 Msa0159590:intron 55.0%
AGGTTGCGGAAGTTGCTGCT+GGG - chr1_4:30196052-30196071 Msa0159590:intron 55.0%
GGAAGTTGCTGCTGGGAGAT+TGG - chr1_4:30196059-30196078 Msa0159590:intron 55.0%
AGTTGCTGCTGGGAGATTGG+AGG - chr1_4:30196062-30196081 Msa0159590:intron 55.0%
CTCGGAGCTGTGGACCAAAT+GGG + chr1_4:30196149-30196168 None:intergenic 55.0%
ACTCGGAGCTGTGGACCAAA+TGG + chr1_4:30196150-30196169 None:intergenic 55.0%
AGCCTCAAGCGATGCAACCA+AGG + chr1_4:30196421-30196440 None:intergenic 55.0%
TTGGTTGCATCGCTTGAGGC+TGG - chr1_4:30196420-30196439 Msa0159590:intron 55.0%
TCTCCGAAAGATGTTGCCCC+TGG - chr1_4:30196584-30196603 Msa0159590:CDS 55.0%
! CAGCTTGCCTTGCTATCGAG+AGG - chr1_4:30197872-30197891 Msa0159590:CDS 55.0%
GGTGTGGGTAACTGATTGGG+GGG + chr1_4:30201019-30201038 None:intergenic 55.0%
GGGTGTGGGTAACTGATTGG+GGG + chr1_4:30201020-30201039 None:intergenic 55.0%
! GGAGGGTGTGGGTAACTGAT+TGG + chr1_4:30201023-30201042 None:intergenic 55.0%
!! TGTCGAGGGGTATTGGCAAG+GGG + chr1_4:30201055-30201074 None:intergenic 55.0%
!! GTGTCGAGGGGTATTGGCAA+GGG + chr1_4:30201056-30201075 None:intergenic 55.0%
!! TGTGTCGAGGGGTATTGGCA+AGG + chr1_4:30201057-30201076 None:intergenic 55.0%
! CTGTGTGGGAAGCGTACCGT+TGG + chr1_4:30193859-30193878 None:intergenic 60.0%
!! CTTCGAGTTGGGAGGAGGAG+AGG + chr1_4:30194040-30194059 None:intergenic 60.0%
GGCCCCGATTATGCGACAGA+GGG + chr1_4:30195497-30195516 None:intergenic 60.0%
AGGCCCCGATTATGCGACAG+AGG + chr1_4:30195498-30195517 None:intergenic 60.0%
! CAGCAACTGCATCGGCCATG+TGG + chr1_4:30195600-30195619 None:intergenic 60.0%
CACATGGCCGATGCAGTTGC+TGG - chr1_4:30195598-30195617 Msa0159590:intron 60.0%
GGAGTCGTGTGCTTCAGGTG+TGG - chr1_4:30195983-30196002 Msa0159590:intron 60.0%
GTCGTGTGCTTCAGGTGTGG+GGG - chr1_4:30195986-30196005 Msa0159590:intron 60.0%
TCGTGTGCTTCAGGTGTGGG+GGG - chr1_4:30195987-30196006 Msa0159590:intron 60.0%
GGTGTGGGGGGAGTTATGTG+AGG - chr1_4:30195999-30196018 Msa0159590:intron 60.0%
GAGGTTGCGGAAGTTGCTGC+TGG - chr1_4:30196051-30196070 Msa0159590:intron 60.0%
CTTGGAGCAGACTAGGGCCT+TGG - chr1_4:30196401-30196420 Msa0159590:intron 60.0%
GGCCTTGGTTGCATCGCTTG+AGG - chr1_4:30196416-30196435 Msa0159590:intron 60.0%
AGCACCACGGCTTTGCTCTG+CGG + chr1_4:30197734-30197753 None:intergenic 60.0%
ATTGGCAAGGGGGTGGAGGT+GGG + chr1_4:30201044-30201063 None:intergenic 60.0%
TATTGGCAAGGGGGTGGAGG+TGG + chr1_4:30201045-30201064 None:intergenic 60.0%
!! GTCGAGGGGTATTGGCAAGG+GGG + chr1_4:30201054-30201073 None:intergenic 60.0%
GAGTTGGGAGGAGGAGAGGG+AGG + chr1_4:30194036-30194055 None:intergenic 65.0%
! AGGTGGTGGCCGCAAGTAGC+AGG - chr1_4:30195191-30195210 Msa0159590:intron 65.0%
ACCACCGCAGAGCAAAGCCG+TGG - chr1_4:30197727-30197746 Msa0159590:CDS 65.0%
ACCACGGCTTTGCTCTGCGG+TGG + chr1_4:30197731-30197750 None:intergenic 65.0%
!! GGGTATTGGCAAGGGGGTGG+AGG + chr1_4:30201048-30201067 None:intergenic 65.0%
!! GAGGGGTATTGGCAAGGGGG+TGG + chr1_4:30201051-30201070 None:intergenic 65.0%
! GGGTGGAGGTGGGAGGGTGT+GGG + chr1_4:30201034-30201053 None:intergenic 70.0%
GCAAGGGGGTGGAGGTGGGA+GGG + chr1_4:30201040-30201059 None:intergenic 70.0%
GGGGTGGAGGTGGGAGGGTG+TGG + chr1_4:30201035-30201054 None:intergenic 75.0%
GGCAAGGGGGTGGAGGTGGG+AGG + chr1_4:30201041-30201060 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 30193822 30201988 30193822 ID=Msa0159590;Name=Msa0159590
chr1_4 mRNA 30193822 30201988 30193822 ID=Msa0159590-mRNA-1;Parent=Msa0159590;Name=Msa0159590-mRNA-1;_AED=0.09;_eAED=0.09;_QI=99|1|0.93|1|1|1|15|0|1353
chr1_4 exon 30193822 30193976 30193822 ID=Msa0159590-mRNA-1:exon:9767;Parent=Msa0159590-mRNA-1
chr1_4 exon 30194050 30194223 30194050 ID=Msa0159590-mRNA-1:exon:9766;Parent=Msa0159590-mRNA-1
chr1_4 exon 30195379 30195577 30195379 ID=Msa0159590-mRNA-1:exon:9765;Parent=Msa0159590-mRNA-1
chr1_4 exon 30195672 30195823 30195672 ID=Msa0159590-mRNA-1:exon:9764;Parent=Msa0159590-mRNA-1
chr1_4 exon 30195931 30195988 30195931 ID=Msa0159590-mRNA-1:exon:9763;Parent=Msa0159590-mRNA-1
chr1_4 exon 30196068 30196183 30196068 ID=Msa0159590-mRNA-1:exon:9762;Parent=Msa0159590-mRNA-1
chr1_4 exon 30196290 30196389 30196290 ID=Msa0159590-mRNA-1:exon:9761;Parent=Msa0159590-mRNA-1
chr1_4 exon 30196475 30196697 30196475 ID=Msa0159590-mRNA-1:exon:9760;Parent=Msa0159590-mRNA-1
chr1_4 exon 30196799 30196866 30196799 ID=Msa0159590-mRNA-1:exon:9759;Parent=Msa0159590-mRNA-1
chr1_4 exon 30197177 30197353 30197177 ID=Msa0159590-mRNA-1:exon:9758;Parent=Msa0159590-mRNA-1
chr1_4 exon 30197478 30198125 30197478 ID=Msa0159590-mRNA-1:exon:9757;Parent=Msa0159590-mRNA-1
chr1_4 exon 30198793 30198984 30198793 ID=Msa0159590-mRNA-1:exon:9756;Parent=Msa0159590-mRNA-1
chr1_4 exon 30199205 30200375 30199205 ID=Msa0159590-mRNA-1:exon:9755;Parent=Msa0159590-mRNA-1
chr1_4 exon 30200454 30200617 30200454 ID=Msa0159590-mRNA-1:exon:9754;Parent=Msa0159590-mRNA-1
chr1_4 exon 30201425 30201988 30201425 ID=Msa0159590-mRNA-1:exon:9753;Parent=Msa0159590-mRNA-1
chr1_4 five_prime_UTR 30201890 30201988 30201890 ID=Msa0159590-mRNA-1:five_prime_utr;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30201425 30201889 30201425 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30200454 30200617 30200454 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30199205 30200375 30199205 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30198793 30198984 30198793 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30197478 30198125 30197478 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30197177 30197353 30197177 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30196799 30196866 30196799 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30196475 30196697 30196475 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30196290 30196389 30196290 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30196068 30196183 30196068 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30195931 30195988 30195931 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30195672 30195823 30195672 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30195379 30195577 30195379 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30194050 30194223 30194050 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
chr1_4 CDS 30193822 30193976 30193822 ID=Msa0159590-mRNA-1:cds;Parent=Msa0159590-mRNA-1
Gene Sequence

>Msa0159590

ATGGCTCCAACCTTCATCTTCCCTCGCACTCTTCAACACCTCGAACAAGATTCACCCTCCGAAGACGACAACAACAACAACAATCTCTCCGTCCAAAACCCTACAAACATCTCCTCCCTCTCCTCCTCCCAACTCGAAGAATTCGTCAAAGGCGTCTCATTCGATCTCTCCGACAGAGAAATCCTCTGCATCCAAGACCAAGACGTATTCGACCGTGTTTACTCTTTGGTTCGCGGTTACTCTTCTTTACATCATTCATGTAAACTCAACCTTGTTGAAAGTCTTCGTTCAAATCTCGCTGTTCTTCTTCCTAATGTTGATTCGCTTTCAAGGGTTTCTAATGAAGATGTTGATGATCATGTTCTTGTTGTTGACCGTGTTGCTTCTCATCGTAATGCTTTTAAAATTTACACCTACTTTCTTCTTAATATTGTTCTCGCTGAAGATTCCAACACTGCTCCTAAGGTGGTGGCCGCAAGTAGCAGGAAGAAACAACCCGTGCATTCATGGAATTGGGAGCCACAGAGAGCTCGGATACTGAATCTCATTGCAAGCTCATTGGAGATAAACCTTGAATTACTTTTTGGTTCATCTGACCCTGACGAAGGTTACTTGTCTTTCATCACAAAAAATGCATTCGCCATGTTTGAAAATGCCGCGCTTTTGAAAGATTCCAACTCAAAAGATGCCCTCTGTCGCATAATCGGGGCCTGCTCCACAAAGTACCATTACACGACACAGTCTAGTGTATCCATCATGCATCTTATTCACAAGTATGATTTTGTTGTCGTCCACATGGCCGATGCAGTTGCTGGTGCCGAAAAGAAGTATTCAGATGGAAGCCTTGCAACTTCCATTGTTAGGGAAATTGGAAGGACTAATCCAAAAGATTATGTCAAAGATACTATTGGTGCTGAAAATGTGGGGCGTTTTCTTGTGGAGTTAGCTGACCGTATTCCAAAATTGATATCAACTAACATTGGCATTCTTGTTCCTCACTTTGGTGGAGAGTCTTATAAGATTAGGAATGCTCTTGTAGCTGTGCTGGGGAAGCTAGTATCAAAAGCTTTTAAGGATATTGATGGTGAAGCGAGTACGAAGAACATTCGGTTACGCACTAAACAAGCTATGTTGGAAATTTTACTTGAGAGATGTAGGGATGTTTCTGCTTACACAAGGAGTCGTGTGCTTCAGGTGTGGGGGGAGTTATGTGAGGAACACTCAGTTTCGATTGGTTTGTGGAACGAGGTTGCGGAAGTTGCTGCTGGGAGATTGGAGGACAAGAGTGCAATAGTCAGAAAATCTGCTTTGAATCTTTTGATCATGATGTTGCAGCATAACCCATTTGGTCCACAGCTCCGAGTAGCTTCATTTGAGGCAACTTTGGATCAGTATAGGAAGAAGTTGAAAGAGCTTGAGCCTTCAGAAGGTTCTGACAATGAAAACTCTAACGTGGATGGTGAGGTAGATGATTTGAATTTTGAAGCTGTTGAGAAGGAGCGGCAAGAGAGTGTGACTGATACATTCATGTCACAGGAAGAAGATGCAATCCCTATGCAGAATGGTAGTGATAGTAGTGTGCCTGATGTTGGGAACTTGGAGCAGACTAGGGCCTTGGTTGCATCGCTTGAGGCTGGTTTGAGATTCTCTAAATGTATAGAGGCCACAATGCCTACACTTCTCCAATTGATGGCATCATCTTCTGCTTCTGATGTTGAAAATACAATTCTCTTGTTGATGAGGTGTAAGCAATTTCAAATTGATGGCTCAGAAGAATGTCTCCGAAAGATGTTGCCCCTGGCATTTTCTCAGGATAAATCAATCTTTGAAGCAGTGGAGAATGCTTTCAGTACAATATACATAAGGAAAAACCCAATGGAAACTGCCAAGAATCTCTTGAGTCTTGCAACTGATTCCAACACAGGAGATCTAGCAGCTCTTGAGTTTATAGTTGGCACACTGGTCTCTAAGGGAGATATATCTTCCAGCACAATATCAGCTTTATGGGATTTCTTTTGCTTCAATGTTGGTGGAACCACCGCAGAGCAAAGCCGTGGTGCTTTATCTGTCCTTTGCATGGTTGAAAAGACATCAACTGGTGTGCTTGGCTCTCATTTACAAGACATCATTGATATTGGGTTTGGTCGTTGGTCTAAAGTTGATCCTTTACTGGCAAGGACAGCTTGCCTTGCTATCGAGAGGCTTTCTGAAGATGACAAGGCAAAATTGTTGGCAAATAATAGTGTTAGAATATTTGGCATTCTCGATAGTTTAATTACTGGCTTTTGGCTTCCAGCAAATATTTGGTATGCAGCTGCTGACAAAGCAATAACTGCCATTTATGCTGTTCACCCTACTCCAGAAATCATAGCAGCTGACATGATAAAGAAATCCCTCAGTTCTGTTTATAAGGATTGTGGTGGCAGTGACACTGACACTAGTAGCAGCATGCCAATCACAGTTCAAGTCGCAAAGCTGAGTAGATGTTTATTTGTCATAAGTCATACAGCCATGAATCAATTGGTCTATATTGAATCATGTGCTCGTAAAATTCAGAAGCAGAAACTTGCAAAAGAGAGAAAGGACATTGAGAGGCAGAGTACAGACAGCAATGGCACAGCATCAACCGGTACACAGAAGGATAATGATATAAATGCCGAGTTAGGATTTGCAGCCTCTGAGGATGCTGCACTTGATGCAATGTTTGAAAAAGCAGAAAAGGAAATTGTTTCTGGCGGTTCAAAGGACAAGAATTTGGTTGGTATCTGTGCAACCTTTTTGTCAAAGCTTTGTAGAAATTTTGGACTACTGCAGAAGTATCCAGAACTACAGGCTTCTGCAATGCTAGCTTTGTGTCGATTGATGGTCATTGATGCAGACTTTTGTGATGCAAATCTTCAGCTTCTCTTCACAGTTGTGGAAAATGCACAGTCAGAAATTGTCCGTTCTAATTGCACTATTGCACTAGGAGATTTAGCAGTAAGGTTTCCCAATCTTTTAGAACCATGGACTGAAAAAATGTATGCCCGCCTACAAGATACTTCTATATCTGTTAGGAAGAATGCGGTTCTGGTGCTTTCACATCTCATACTAAATGACATGATGAAGGTGAAAGGGTACATTAATGAAATGGCAGTTAGATTAGAAGACGAAGATGAGAGAATTTCAAATCTGGCTAAGCTGTTTTTTCTTGAACTTTCCAAGAAAGGAAACAATCCAATATATAATTTGCTTCCTGACATACTTAGCAAATTATCCAAGCAGAACCTGAACAATGAATCTTTCTGCAACATCATGCAATTTTTAATTGCTTCCATTAAGAAGGACAGACAAATGGAAGCACTGGTGGAAAAGCTATGTAATCGGTTTAGTGGTGTCACAGATGTCAGACAGTGGGAGCATATATCTTATTGTCTATCTCAGCTATCATTTACTGAAAAGGGGATGAAAAAACTCATAGATTTATTTAAGACCTATGAACATGCCTTGTCAGAGGATTCTGTTATGGATAATTTTAGAAACATATTAAACAAGGCAAAGAAGTTTGCAAAATTGGAACTTAAAACTTACATTGAGGAGTTTGAAGATAAGCTGAATAAGTTCCACATGGAAAAGAAGGAACAGGAAGTTACTGCTCGAAATGCCCAAATCCATCAACAGAAGATTGACAGCAGGGAAGGCTTTAATGTGAATAAAAATTCCGAAGATCACTCGAAGTCTAATACATCTTCAGATGAAGTAGATGGTGAAGTAATTGTTACAAGCACTGAAGGGACAAATGCTTTGTCTATAAATGGCAAATCAAGTTCTAAACCGGTACCAGAAGCATCGTCTAGTGCTTTGAGTGAATTGATTGAATCAGATCAAGTAGATATTGAAGTCCAGTCACCCATGGTTAAGACAACAGGAGCTCAACGGTCCAGGATTAAAACAACCAATGTGAAAGGTGAAAAAGGTGATATCTCTATCACCAAAGCATCTTCTAGTGTTTTGAGTGAATTGATTGAATCAGATCAAGTGGATATTGAAGTCCAATCACCCATGGTTAAGACAAGAGGTTAG
Protein sequence

>Msa0159590

MAPTFIFPRTLQHLEQDSPSEDDNNNNNLSVQNPTNISSLSSSQLEEFVKGVSFDLSDREILCIQDQDVFDRVYSLVRGYSSLHHSCKLNLVESLRSNLAVLLPNVDSLSRVSNEDVDDHVLVVDRVASHRNAFKIYTYFLLNIVLAEDSNTAPKVVAASSRKKQPVHSWNWEPQRARILNLIASSLEINLELLFGSSDPDEGYLSFITKNAFAMFENAALLKDSNSKDALCRIIGACSTKYHYTTQSSVSIMHLIHKYDFVVVHMADAVAGAEKKYSDGSLATSIVREIGRTNPKDYVKDTIGAENVGRFLVELADRIPKLISTNIGILVPHFGGESYKIRNALVAVLGKLVSKAFKDIDGEASTKNIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWGELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLDQYRKKLKELEPSEGSDNENSNVDGEVDDLNFEAVEKERQESVTDTFMSQEEDAIPMQNGSDSSVPDVGNLEQTRALVASLEAGLRFSKCIEATMPTLLQLMASSSASDVENTILLLMRCKQFQIDGSEECLRKMLPLAFSQDKSIFEAVENAFSTIYIRKNPMETAKNLLSLATDSNTGDLAALEFIVGTLVSKGDISSSTISALWDFFCFNVGGTTAEQSRGALSVLCMVEKTSTGVLGSHLQDIIDIGFGRWSKVDPLLARTACLAIERLSEDDKAKLLANNSVRIFGILDSLITGFWLPANIWYAAADKAITAIYAVHPTPEIIAADMIKKSLSSVYKDCGGSDTDTSSSMPITVQVAKLSRCLFVISHTAMNQLVYIESCARKIQKQKLAKERKDIERQSTDSNGTASTGTQKDNDINAELGFAASEDAALDAMFEKAEKEIVSGGSKDKNLVGICATFLSKLCRNFGLLQKYPELQASAMLALCRLMVIDADFCDANLQLLFTVVENAQSEIVRSNCTIALGDLAVRFPNLLEPWTEKMYARLQDTSISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKLSKQNLNNESFCNIMQFLIASIKKDRQMEALVEKLCNRFSGVTDVRQWEHISYCLSQLSFTEKGMKKLIDLFKTYEHALSEDSVMDNFRNILNKAKKFAKLELKTYIEEFEDKLNKFHMEKKEQEVTARNAQIHQQKIDSREGFNVNKNSEDHSKSNTSSDEVDGEVIVTSTEGTNALSINGKSSSKPVPEASSSALSELIESDQVDIEVQSPMVKTTGAQRSRIKTTNVKGEKGDISITKASSSVLSELIESDQVDIEVQSPMVKTRG*