Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296090 | XP_003629580.1 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296090 | sp|Q9C566|CYP40_ARATH | 71.389 | 360 | 102 | 1 | 1 | 359 | 1 | 360 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296090 | G7LGD2 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1296090 | 0.822342 | 2.493788e-53 | -8.615850e-47 |
| Msa0021290 | Msa1296090 | 0.807919 | 3.994490e-50 | -8.615850e-47 |
| Msa0021320 | Msa1296090 | 0.816270 | 6.030598e-52 | -8.615850e-47 |
| Msa0040220 | Msa1296090 | 0.832364 | 9.861972e-56 | -8.615850e-47 |
| Msa0050530 | Msa1296090 | 0.800642 | 1.309687e-48 | -8.615850e-47 |
| Msa0055880 | Msa1296090 | 0.811045 | 8.517930e-51 | -8.615850e-47 |
| Msa0056000 | Msa1296090 | 0.811535 | 6.668322e-51 | -8.615850e-47 |
| Msa0086160 | Msa1296090 | 0.825661 | 4.151332e-54 | -8.615850e-47 |
| Msa0087910 | Msa1296090 | 0.841440 | 4.746807e-58 | -8.615850e-47 |
| Msa0089540 | Msa1296090 | 0.807324 | 5.345180e-50 | -8.615850e-47 |
| Msa0100600 | Msa1296090 | 0.814854 | 1.246282e-51 | -8.615850e-47 |
| Msa0100890 | Msa1296090 | 0.818194 | 2.225480e-52 | -8.615850e-47 |
| Msa0114600 | Msa1296090 | 0.829474 | 5.043743e-55 | -8.615850e-47 |
| Msa0602900 | Msa1296090 | 0.845548 | 3.791276e-59 | -8.615850e-47 |
| Msa0605890 | Msa1296090 | 0.807446 | 5.035659e-50 | -8.615850e-47 |
| Msa0609120 | Msa1296090 | 0.839238 | 1.785608e-57 | -8.615850e-47 |
| Msa0619230 | Msa1296090 | 0.844883 | 5.735998e-59 | -8.615850e-47 |
| Msa0643960 | Msa1296090 | 0.846236 | 2.465677e-59 | -8.615850e-47 |
| Msa0656450 | Msa1296090 | 0.820397 | 7.008554e-53 | -8.615850e-47 |
| Msa0663400 | Msa1296090 | 0.814373 | 1.592483e-51 | -8.615850e-47 |
| Msa0667110 | Msa1296090 | 0.800820 | 1.204404e-48 | -8.615850e-47 |
| Msa0694400 | Msa1296090 | 0.859243 | 4.733444e-63 | -8.615850e-47 |
| Msa0704860 | Msa1296090 | 0.825001 | 5.947623e-54 | -8.615850e-47 |
| Msa0708630 | Msa1296090 | 0.875303 | 3.427667e-68 | -8.615850e-47 |
| Msa0718560 | Msa1296090 | 0.823911 | 1.073225e-53 | -8.615850e-47 |
| Msa0745640 | Msa1296090 | 0.805250 | 1.461360e-49 | -8.615850e-47 |
| Msa0767280 | Msa1296090 | 0.817644 | 2.963437e-52 | -8.615850e-47 |
| Msa0790450 | Msa1296090 | 0.859567 | 3.784139e-63 | -8.615850e-47 |
| Msa0128330 | Msa1296090 | 0.821570 | 3.764293e-53 | -8.615850e-47 |
| Msa0132460 | Msa1296090 | 0.874599 | 5.956170e-68 | -8.615850e-47 |
| Msa0134580 | Msa1296090 | 0.868860 | 4.767930e-66 | -8.615850e-47 |
| Msa0153510 | Msa1296090 | 0.810375 | 1.189142e-50 | -8.615850e-47 |
| Msa0167860 | Msa1296090 | 0.825688 | 4.088998e-54 | -8.615850e-47 |
| Msa0174580 | Msa1296090 | 0.819856 | 9.324891e-53 | -8.615850e-47 |
| Msa0182050 | Msa1296090 | 0.874756 | 5.265417e-68 | -8.615850e-47 |
| Msa0182100 | Msa1296090 | 0.862758 | 4.038882e-64 | -8.615850e-47 |
| Msa0183840 | Msa1296090 | 0.803498 | 3.386924e-49 | -8.615850e-47 |
| Msa0188740 | Msa1296090 | 0.847357 | 1.217288e-59 | -8.615850e-47 |
| Msa0192050 | Msa1296090 | 0.805890 | 1.072786e-49 | -8.615850e-47 |
| Msa0192300 | Msa1296090 | 0.849004 | 4.269494e-60 | -8.615850e-47 |
| Msa1227350 | Msa1296090 | 0.812126 | 4.959297e-51 | -8.615850e-47 |
| Msa1235980 | Msa1296090 | 0.804831 | 1.788486e-49 | -8.615850e-47 |
| Msa1237040 | Msa1296090 | 0.825029 | 5.855857e-54 | -8.615850e-47 |
| Msa1244920 | Msa1296090 | 0.817711 | 2.862461e-52 | -8.615850e-47 |
| Msa1255830 | Msa1296090 | 0.920909 | 7.035596e-88 | -8.615850e-47 |
| Msa1255850 | Msa1296090 | 0.941960 | 1.669776e-101 | -8.615850e-47 |
| Msa1258460 | Msa1296090 | 0.808858 | 2.519506e-50 | -8.615850e-47 |
| Msa1284060 | Msa1296090 | 0.827454 | 1.550531e-54 | -8.615850e-47 |
| Msa1296090 | Msa1317390 | 0.809754 | 1.618070e-50 | -8.615850e-47 |
| Msa1296090 | Msa1341780 | 0.818465 | 1.932621e-52 | -8.615850e-47 |
| Msa1296090 | Msa1351020 | 0.847450 | 1.147611e-59 | -8.615850e-47 |
| Msa1296090 | Msa1367540 | 0.802321 | 5.930872e-49 | -8.615850e-47 |
| Msa1296090 | Msa1368170 | 0.820024 | 8.531824e-53 | -8.615850e-47 |
| Msa1296090 | Msa1385480 | 0.866990 | 1.902731e-65 | -8.615850e-47 |
| Msa1296090 | Msa1385570 | 0.805963 | 1.035510e-49 | -8.615850e-47 |
| Msa1296090 | Msa1388890 | 0.802600 | 5.193939e-49 | -8.615850e-47 |
| Msa1296090 | Msa1390760 | 0.845436 | 4.065893e-59 | -8.615850e-47 |
| Msa1296090 | Msa1403520 | 0.833312 | 5.732593e-56 | -8.615850e-47 |
| Msa1296090 | Msa1407550 | 0.803507 | 3.372699e-49 | -8.615850e-47 |
| Msa1296090 | Msa1413570 | 0.826139 | 3.195454e-54 | -8.615850e-47 |
| Msa1296090 | Msa1424570 | 0.834327 | 3.195257e-56 | -8.615850e-47 |
| Msa1296090 | Msa1432310 | 0.848771 | 4.955206e-60 | -8.615850e-47 |
| Msa1296090 | Msa1446510 | 0.838495 | 2.779959e-57 | -8.615850e-47 |
| Msa1296090 | Msa1450560 | 0.862489 | 4.889515e-64 | -8.615850e-47 |
| Msa1296090 | Msa1463570 | 0.813917 | 2.007809e-51 | -8.615850e-47 |
| Msa0371490 | Msa1296090 | 0.829216 | 5.826983e-55 | -8.615850e-47 |
| Msa0374050 | Msa1296090 | 0.803715 | 3.053981e-49 | -8.615850e-47 |
| Msa0377520 | Msa1296090 | 0.815595 | 8.531197e-52 | -8.615850e-47 |
| Msa0388250 | Msa1296090 | 0.816246 | 6.105359e-52 | -8.615850e-47 |
| Msa0398410 | Msa1296090 | 0.810651 | 1.036705e-50 | -8.615850e-47 |
| Msa0416210 | Msa1296090 | 0.828526 | 8.559928e-55 | -8.615850e-47 |
| Msa0423230 | Msa1296090 | 0.815750 | 7.879415e-52 | -8.615850e-47 |
| Msa0426250 | Msa1296090 | 0.824843 | 6.478845e-54 | -8.615850e-47 |
| Msa0433060 | Msa1296090 | 0.802094 | 6.603453e-49 | -8.615850e-47 |
| Msa0450150 | Msa1296090 | 0.847542 | 1.082742e-59 | -8.615850e-47 |
| Msa0469430 | Msa1296090 | 0.839191 | 1.835994e-57 | -8.615850e-47 |
| Msa1001620 | Msa1296090 | 0.817442 | 3.290166e-52 | -8.615850e-47 |
| Msa1025200 | Msa1296090 | 0.852022 | 6.060731e-61 | -8.615850e-47 |
| Msa1025220 | Msa1296090 | 0.854835 | 9.447508e-62 | -8.615850e-47 |
| Msa1047020 | Msa1296090 | 0.838921 | 2.157844e-57 | -8.615850e-47 |
| Msa1050100 | Msa1296090 | 0.818131 | 2.300575e-52 | -8.615850e-47 |
| Msa1068660 | Msa1296090 | 0.805443 | 1.331613e-49 | -8.615850e-47 |
| Msa1082050 | Msa1296090 | 0.801833 | 7.470449e-49 | -8.615850e-47 |
| Msa1083630 | Msa1296090 | 0.802698 | 4.958008e-49 | -8.615850e-47 |
| Msa1085850 | Msa1296090 | 0.822899 | 1.850891e-53 | -8.615850e-47 |
| Msa0270160 | Msa1296090 | 0.861589 | 9.224357e-64 | -8.615850e-47 |
| Msa0274940 | Msa1296090 | 0.804189 | 2.434624e-49 | -8.615850e-47 |
| Msa0277600 | Msa1296090 | 0.855774 | 5.033577e-62 | -8.615850e-47 |
| Msa0301250 | Msa1296090 | 0.847216 | 1.330776e-59 | -8.615850e-47 |
| Msa0313060 | Msa1296090 | 0.863739 | 2.007292e-64 | -8.615850e-47 |
| Msa0315430 | Msa1296090 | 0.846460 | 2.142022e-59 | -8.615850e-47 |
| Msa0315660 | Msa1296090 | 0.807266 | 5.498462e-50 | -8.615850e-47 |
| Msa0356640 | Msa1296090 | 0.828339 | 9.500910e-55 | -8.615850e-47 |
| Msa1109310 | Msa1296090 | 0.815034 | 1.136535e-51 | -8.615850e-47 |
| Msa1126690 | Msa1296090 | 0.883689 | 3.628786e-71 | -8.615850e-47 |
| Msa1163320 | Msa1296090 | 0.800083 | 1.702345e-48 | -8.615850e-47 |
| Msa1203560 | Msa1296090 | 0.826445 | 2.702821e-54 | -8.615850e-47 |
| Msa0495620 | Msa1296090 | 0.826944 | 2.053929e-54 | -8.615850e-47 |
| Msa0511760 | Msa1296090 | 0.832000 | 1.213388e-55 | -8.615850e-47 |
| Msa0515110 | Msa1296090 | 0.832169 | 1.102249e-55 | -8.615850e-47 |
| Msa0521730 | Msa1296090 | 0.803595 | 3.233660e-49 | -8.615850e-47 |
| Msa0524680 | Msa1296090 | 0.802070 | 6.678701e-49 | -8.615850e-47 |
| Msa0547920 | Msa1296090 | 0.848980 | 4.335356e-60 | -8.615850e-47 |
| Msa0573550 | Msa1296090 | 0.882976 | 6.629555e-71 | -8.615850e-47 |
| Msa0578010 | Msa1296090 | 0.812630 | 3.849313e-51 | -8.615850e-47 |
| Msa0585570 | Msa1296090 | 0.803083 | 4.129227e-49 | -8.615850e-47 |
| Msa0846900 | Msa1296090 | 0.816537 | 5.255376e-52 | -8.615850e-47 |
| Msa0929700 | Msa1296090 | 0.867896 | 9.761408e-66 | -8.615850e-47 |
| Msa0930100 | Msa1296090 | 0.831419 | 1.687233e-55 | -8.615850e-47 |
| Msa0930360 | Msa1296090 | 0.801801 | 7.587004e-49 | -8.615850e-47 |
| Msa0930790 | Msa1296090 | 0.823712 | 1.194880e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296090 | MtrunA17_Chr8g0374621 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0.0 | 738 |
| Msa1296090 | MtrunA17_Chr4g0045321 | 74.238 | 361 | 92 | 1 | 1 | 360 | 1 | 361 | 0.0 | 566 |
| Msa1296090 | MtrunA17_Chr7g0274841 | 64.000 | 175 | 59 | 3 | 1 | 174 | 1 | 172 | 2.91e-71 | 219 |
| Msa1296090 | MtrunA17_Chr7g0260441 | 61.326 | 181 | 67 | 2 | 3 | 182 | 6 | 184 | 6.26e-70 | 230 |
| Msa1296090 | MtrunA17_Chr4g0038431 | 61.714 | 175 | 63 | 3 | 1 | 174 | 1 | 172 | 1.04e-69 | 216 |
| Msa1296090 | MtrunA17_Chr3g0145501 | 58.721 | 172 | 67 | 3 | 5 | 175 | 13 | 181 | 9.63e-64 | 201 |
| Msa1296090 | MtrunA17_Chr3g0104751 | 59.763 | 169 | 66 | 2 | 5 | 173 | 35 | 201 | 1.79e-63 | 201 |
| Msa1296090 | MtrunA17_Chr3g0113441 | 57.895 | 171 | 70 | 2 | 5 | 175 | 65 | 233 | 6.74e-63 | 200 |
| Msa1296090 | MtrunA17_Chr1g0213971 | 58.140 | 172 | 61 | 2 | 5 | 173 | 78 | 241 | 1.79e-61 | 197 |
| Msa1296090 | MtrunA17_Chr7g0270991 | 55.621 | 169 | 67 | 1 | 5 | 173 | 97 | 257 | 4.52e-60 | 194 |
| Msa1296090 | MtrunA17_Chr1g0193711 | 58.235 | 170 | 62 | 2 | 5 | 173 | 86 | 247 | 9.10e-60 | 193 |
| Msa1296090 | MtrunA17_Chr8g0353571 | 55.814 | 172 | 72 | 2 | 3 | 173 | 17 | 185 | 1.58e-58 | 187 |
| Msa1296090 | MtrunA17_Chr4g0037281 | 57.059 | 170 | 71 | 2 | 5 | 173 | 47 | 215 | 1.69e-57 | 186 |
| Msa1296090 | MtrunA17_Chr3g0138061 | 48.000 | 200 | 99 | 3 | 3 | 201 | 9 | 204 | 1.11e-46 | 170 |
| Msa1296090 | MtrunA17_Chr1g0149061 | 50.292 | 171 | 81 | 3 | 6 | 175 | 9 | 176 | 9.50e-44 | 161 |
| Msa1296090 | MtrunA17_Chr8g0351571 | 49.664 | 149 | 62 | 3 | 18 | 165 | 10 | 146 | 7.41e-40 | 138 |
| Msa1296090 | MtrunA17_Chr2g0321111 | 50.649 | 154 | 63 | 4 | 18 | 170 | 471 | 612 | 2.25e-37 | 142 |
| Msa1296090 | MtrunA17_Chr7g0266721 | 44.848 | 165 | 73 | 5 | 4 | 167 | 10 | 157 | 4.17e-35 | 126 |
| Msa1296090 | MtrunA17_Chr5g0401141 | 40.102 | 197 | 83 | 6 | 18 | 213 | 354 | 516 | 5.32e-32 | 126 |
| Msa1296090 | MtrunA17_Chr2g0288371 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 1.20e-21 | 95.9 |
| Msa1296090 | MtrunA17_Chr6g0484281 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.52e-17 | 84.0 |
| Msa1296090 | MtrunA17_Chr8g0377771 | 34.756 | 164 | 97 | 4 | 203 | 359 | 383 | 543 | 3.99e-17 | 82.8 |
| Msa1296090 | MtrunA17_Chr8g0339141 | 34.965 | 143 | 89 | 3 | 219 | 360 | 409 | 548 | 1.16e-16 | 81.3 |
| Msa1296090 | MtrunA17_Chr8g0357591 | 33.962 | 159 | 84 | 5 | 18 | 167 | 10 | 156 | 1.72e-16 | 80.9 |
| Msa1296090 | MtrunA17_Chr7g0234801 | 33.333 | 174 | 105 | 5 | 194 | 359 | 369 | 539 | 2.02e-15 | 77.4 |
| Msa1296090 | MtrunA17_Chr3g0122871 | 62.500 | 48 | 18 | 0 | 104 | 151 | 62 | 109 | 9.56e-15 | 70.1 |
| Msa1296090 | MtrunA17_Chr7g0255551 | 34.437 | 151 | 95 | 3 | 209 | 358 | 374 | 521 | 4.04e-14 | 73.6 |
| Msa1296090 | MtrunA17_Chr1g0199071 | 33.758 | 157 | 81 | 7 | 17 | 170 | 88 | 224 | 1.20e-13 | 69.7 |
| Msa1296090 | MtrunA17_Chr1g0163031 | 31.818 | 154 | 89 | 4 | 17 | 170 | 87 | 224 | 2.24e-12 | 65.9 |
| Msa1296090 | MtrunA17_Chr1g0152361 | 32.164 | 171 | 92 | 6 | 203 | 359 | 212 | 372 | 1.13e-11 | 65.5 |
| Msa1296090 | MtrunA17_Chr2g0305071 | 23.529 | 238 | 109 | 9 | 1 | 171 | 51 | 282 | 1.65e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296090 | AT2G15790.1 | 71.389 | 360 | 102 | 1 | 1 | 359 | 1 | 360 | 0.0 | 546 |
| Msa1296090 | AT3G63400.2 | 67.241 | 174 | 54 | 2 | 3 | 175 | 6 | 177 | 2.26e-75 | 238 |
| Msa1296090 | AT3G63400.3 | 67.241 | 174 | 54 | 2 | 3 | 175 | 6 | 177 | 1.96e-73 | 238 |
| Msa1296090 | AT3G63400.4 | 67.241 | 174 | 54 | 2 | 3 | 175 | 6 | 177 | 1.96e-73 | 238 |
| Msa1296090 | AT3G63400.1 | 67.241 | 174 | 54 | 2 | 3 | 175 | 6 | 177 | 1.96e-73 | 238 |
| Msa1296090 | AT4G34870.1 | 63.429 | 175 | 60 | 3 | 1 | 174 | 1 | 172 | 3.81e-71 | 219 |
| Msa1296090 | AT2G21130.1 | 62.069 | 174 | 62 | 3 | 3 | 175 | 4 | 174 | 2.71e-70 | 218 |
| Msa1296090 | AT2G16600.1 | 62.428 | 173 | 61 | 3 | 3 | 174 | 4 | 173 | 3.88e-70 | 217 |
| Msa1296090 | AT3G56070.1 | 63.793 | 174 | 59 | 3 | 1 | 173 | 1 | 171 | 5.32e-70 | 217 |
| Msa1296090 | AT3G56070.2 | 63.793 | 174 | 59 | 3 | 1 | 173 | 1 | 171 | 5.32e-70 | 217 |
| Msa1296090 | AT4G38740.1 | 61.143 | 175 | 64 | 3 | 1 | 174 | 1 | 172 | 2.10e-69 | 215 |
| Msa1296090 | AT5G13120.2 | 56.818 | 176 | 65 | 2 | 5 | 177 | 87 | 254 | 4.42e-63 | 202 |
| Msa1296090 | AT2G29960.1 | 59.172 | 169 | 67 | 2 | 5 | 173 | 33 | 199 | 4.74e-63 | 200 |
| Msa1296090 | AT2G29960.3 | 59.172 | 169 | 67 | 2 | 5 | 173 | 33 | 199 | 4.74e-63 | 200 |
| Msa1296090 | AT5G13120.1 | 56.818 | 176 | 65 | 2 | 5 | 177 | 91 | 258 | 4.78e-63 | 202 |
| Msa1296090 | AT3G55920.1 | 59.412 | 170 | 67 | 2 | 5 | 174 | 60 | 227 | 6.21e-63 | 201 |
| Msa1296090 | AT3G62030.3 | 57.988 | 169 | 63 | 1 | 5 | 173 | 95 | 255 | 8.66e-62 | 199 |
| Msa1296090 | AT3G62030.1 | 57.988 | 169 | 63 | 1 | 5 | 173 | 96 | 256 | 9.02e-62 | 199 |
| Msa1296090 | AT3G62030.2 | 57.988 | 169 | 63 | 1 | 5 | 173 | 149 | 309 | 2.22e-61 | 199 |
| Msa1296090 | AT5G58710.1 | 57.988 | 169 | 69 | 2 | 5 | 173 | 36 | 202 | 7.35e-60 | 192 |
| Msa1296090 | AT2G38730.1 | 56.977 | 172 | 70 | 2 | 3 | 173 | 31 | 199 | 1.39e-59 | 191 |
| Msa1296090 | AT4G34960.1 | 54.438 | 169 | 76 | 1 | 5 | 173 | 48 | 215 | 1.04e-57 | 187 |
| Msa1296090 | AT2G29960.2 | 56.805 | 169 | 61 | 3 | 5 | 173 | 33 | 189 | 1.79e-57 | 185 |
| Msa1296090 | AT2G16600.2 | 54.913 | 173 | 52 | 3 | 3 | 174 | 4 | 151 | 2.07e-56 | 181 |
| Msa1296090 | AT4G34960.2 | 58.197 | 122 | 50 | 1 | 5 | 126 | 48 | 168 | 4.36e-44 | 150 |
| Msa1296090 | AT4G32420.1 | 48.538 | 171 | 85 | 2 | 3 | 172 | 6 | 174 | 3.10e-43 | 160 |
| Msa1296090 | AT4G32420.5 | 48.538 | 171 | 85 | 2 | 3 | 172 | 6 | 174 | 3.10e-43 | 160 |
| Msa1296090 | AT4G32420.3 | 48.538 | 171 | 85 | 2 | 3 | 172 | 6 | 174 | 3.10e-43 | 160 |
| Msa1296090 | AT4G32420.6 | 48.538 | 171 | 85 | 2 | 3 | 172 | 6 | 174 | 3.10e-43 | 160 |
| Msa1296090 | AT3G22920.1 | 47.253 | 182 | 84 | 6 | 1 | 179 | 1 | 173 | 1.51e-41 | 145 |
| Msa1296090 | AT4G32420.4 | 49.664 | 149 | 75 | 0 | 3 | 151 | 6 | 154 | 4.45e-41 | 154 |
| Msa1296090 | AT1G01940.1 | 48.993 | 149 | 63 | 3 | 18 | 165 | 10 | 146 | 1.69e-38 | 135 |
| Msa1296090 | AT3G44600.1 | 50.649 | 154 | 63 | 3 | 18 | 170 | 485 | 626 | 2.10e-38 | 145 |
| Msa1296090 | AT2G36130.1 | 43.636 | 165 | 75 | 5 | 4 | 167 | 10 | 157 | 1.42e-34 | 125 |
| Msa1296090 | AT5G67530.1 | 44.156 | 154 | 73 | 4 | 18 | 170 | 353 | 494 | 1.74e-32 | 128 |
| Msa1296090 | AT4G33060.1 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 2.78e-25 | 107 |
| Msa1296090 | AT1G53720.2 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 4.88e-19 | 87.4 |
| Msa1296090 | AT1G53720.1 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.80e-18 | 87.0 |
| Msa1296090 | AT3G25230.1 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 4.22e-18 | 85.9 |
| Msa1296090 | AT3G25230.2 | 36.207 | 174 | 100 | 5 | 194 | 359 | 375 | 545 | 4.98e-18 | 85.9 |
| Msa1296090 | AT5G48570.1 | 32.121 | 165 | 102 | 3 | 203 | 360 | 395 | 556 | 1.87e-15 | 78.2 |
| Msa1296090 | AT1G58450.1 | 35.172 | 145 | 83 | 4 | 219 | 359 | 17 | 154 | 5.99e-13 | 66.6 |
Find 116 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCAAGGCTTTGCGCTATT+TGG | 0.169942 | 8_3:+54845321 | Msa1296090:CDS |
| CAGAGAAGAGCACTGCTTTA+AGG | 0.171724 | 8_3:+54845496 | Msa1296090:intron |
| CAGGCCTGTAAATTAAAATT+AGG | 0.205661 | 8_3:+54846259 | Msa1296090:intron |
| TCTCTCTGCACCGGCGAAAA+AGG | 0.252295 | 8_3:+54844384 | Msa1296090:CDS |
| GATGGGAAGCATGTGGTGTT+TGG | 0.308347 | 8_3:+54844663 | Msa1296090:CDS |
| AATTAGCCTTGATGCGGATA+TGG | 0.331853 | 8_3:+54847903 | Msa1296090:exon |
| TGTATTACTGACCTTCTTCC+TGG | 0.341120 | 8_3:-54847748 | None:intergenic |
| AACTGACTCCCATTGGTGTT+TGG | 0.342691 | 8_3:-54844609 | None:intergenic |
| CTGTTGAGCTTGGTCCGGTT+GGG | 0.343040 | 8_3:+54844718 | Msa1296090:CDS |
| ATGGGAAGCATGTGGTGTTT+GGG | 0.357969 | 8_3:+54844664 | Msa1296090:CDS |
| GCTCAAAGAGTTTGTCAAAA+TGG | 0.375853 | 8_3:-54848090 | None:intergenic |
| CTTTGGAAATGAACACTATA+AGG | 0.386961 | 8_3:+54844923 | Msa1296090:CDS |
| GACGACGAGGACGCCGCATT+TGG | 0.389302 | 8_3:+54844641 | Msa1296090:CDS |
| CAGTGGAGCTTTACTTGATT+CGG | 0.393358 | 8_3:+54846288 | Msa1296090:CDS |
| AATAGTCACCAACCATCATT+TGG | 0.395698 | 8_3:-54847095 | None:intergenic |
| TTGCTGAAGGGGAGGATGAA+GGG | 0.404415 | 8_3:+54844790 | Msa1296090:CDS |
| TGAAAGGGATTGGAGTTGTT+AGG | 0.404472 | 8_3:+54844694 | Msa1296090:CDS |
| GGGAAGGTTGTGAAAGGGAT+TGG | 0.404533 | 8_3:+54844684 | Msa1296090:CDS |
| GTTGAATCTATCAAGGGCTT+TGG | 0.411683 | 8_3:+54844906 | Msa1296090:CDS |
| ACCTAAAACACGAACGGAAA+GGG | 0.412914 | 8_3:+54844562 | Msa1296090:CDS |
| CAATGACCTGGATGCCGCTC+TGG | 0.426988 | 8_3:+54847043 | Msa1296090:CDS |
| GGTCGATCGTTCTCCCCAAC+CGG | 0.427649 | 8_3:-54844732 | None:intergenic |
| CTGATGTCGAAGAAGACTCT+TGG | 0.430755 | 8_3:-54844282 | None:intergenic |
| GGAAGATGGATTTCTTGAAA+TGG | 0.436360 | 8_3:-54844434 | None:intergenic |
| TGCGCTATTTGGACATGTGT+TGG | 0.444418 | 8_3:+54845332 | Msa1296090:CDS |
| ATCTCCGCCTCCGACGGAAC+CGG | 0.449439 | 8_3:+54844495 | Msa1296090:CDS |
| ATCCACCATTCAAGCTCCTC+CGG | 0.449666 | 8_3:-54844876 | None:intergenic |
| ATTGCTGAAGGGGAGGATGA+AGG | 0.452826 | 8_3:+54844789 | Msa1296090:CDS |
| GCGCTATTTGGACATGTGTT+GGG | 0.453371 | 8_3:+54845333 | Msa1296090:CDS |
| TCTGTTGAGCTTGGTCCGGT+TGG | 0.454918 | 8_3:+54844717 | Msa1296090:CDS |
| TCTCTGTTATAGAAAATCAC+TGG | 0.460527 | 8_3:-54848118 | None:intergenic |
| ATGTTGTGATTGCTGATTGT+GGG | 0.460587 | 8_3:+54844763 | Msa1296090:CDS |
| GGCTTGGTATCAAGATCAAC+AGG | 0.465685 | 8_3:-54844855 | None:intergenic |
| ACGAGGACGCCGCATTTGGA+TGG | 0.473500 | 8_3:+54844645 | Msa1296090:CDS |
| AGCTCTGTTTCGCAAAGGCC+AGG | 0.474119 | 8_3:+54846342 | Msa1296090:CDS |
| TGTTGAGCTTGGTCCGGTTG+GGG | 0.477465 | 8_3:+54844719 | Msa1296090:CDS |
| GTTGTTAGGTCTGTTGAGCT+TGG | 0.477926 | 8_3:+54844708 | Msa1296090:CDS |
| GAATGCTGTTGAATCTATCA+AGG | 0.478392 | 8_3:+54844899 | Msa1296090:CDS |
| CCAAGCCGGAGGAGCTTGAA+TGG | 0.487486 | 8_3:+54844871 | Msa1296090:CDS |
| TCAAATCTTTACCAACAGTT+CGG | 0.490310 | 8_3:+54845530 | Msa1296090:CDS |
| GGTTGCTGATAGACATGATA+AGG | 0.494242 | 8_3:+54847854 | Msa1296090:intron |
| GAAAACTTGTCAGTTGTGAC+TGG | 0.495156 | 8_3:-54848209 | None:intergenic |
| TTTGACGACACGGTGGAAGA+TGG | 0.495856 | 8_3:-54844448 | None:intergenic |
| AGCTATCCAGAGCGGCATCC+AGG | 0.495882 | 8_3:-54847049 | None:intergenic |
| TGCTGAAGGGGAGGATGAAG+GGG | 0.498218 | 8_3:+54844791 | Msa1296090:CDS |
| CAGCATCGGCGGCGAACTCG+AGG | 0.500261 | 8_3:+54844302 | Msa1296090:CDS |
| TCGAAGAAGACTCTTGGGTT+CGG | 0.500428 | 8_3:-54844276 | None:intergenic |
| TGATGTCGAAGAAGACTCTT+GGG | 0.501491 | 8_3:-54844281 | None:intergenic |
| TGACTCGCCGCCGGTTCCGT+CGG | 0.502311 | 8_3:-54844505 | None:intergenic |
| CCATTCAAGCTCCTCCGGCT+TGG | 0.508001 | 8_3:-54844871 | None:intergenic |
| GGAGAACGATCGACCGGAGC+AGG | 0.509782 | 8_3:+54844740 | Msa1296090:CDS |
| TTTCGCCGGTGCAGAGAGAT+CGG | 0.511855 | 8_3:-54844380 | None:intergenic |
| GCCGCCGGTTCCGTCGGAGG+CGG | 0.516656 | 8_3:-54844499 | None:intergenic |
| AGGCGGAGATGTCACCGCCT+TGG | 0.518147 | 8_3:-54844482 | None:intergenic |
| ATCTTCCACCGTGTCGTCAA+AGG | 0.519364 | 8_3:+54844450 | Msa1296090:CDS |
| ATACCGGTCCAAACACCAAT+GGG | 0.522499 | 8_3:+54844601 | Msa1296090:CDS |
| TTAGAGTTGGAGCCAAATGA+TGG | 0.524064 | 8_3:+54847083 | Msa1296090:CDS |
| CTTCAAGAGAGCATTAGAGT+TGG | 0.526509 | 8_3:+54847070 | Msa1296090:CDS |
| GTCTTCTTCGACATCAGCAT+CGG | 0.526577 | 8_3:+54844288 | Msa1296090:CDS |
| GTGTTTGGGAAGGTTGTGAA+AGG | 0.528665 | 8_3:+54844678 | Msa1296090:CDS |
| TAGGTCTGTTGAGCTTGGTC+CGG | 0.531881 | 8_3:+54844713 | Msa1296090:CDS |
| ACTCCCATTGGTGTTTGGAC+CGG | 0.534347 | 8_3:-54844604 | None:intergenic |
| TTGTGGGGAGATTGCTGAAG+GGG | 0.543269 | 8_3:+54844779 | Msa1296090:CDS |
| GATGTTGTGATTGCTGATTG+TGG | 0.548690 | 8_3:+54844762 | Msa1296090:CDS |
| CTCGCCGCCGGTTCCGTCGG+AGG | 0.551251 | 8_3:-54844502 | None:intergenic |
| GCAATCACAACATCCTGCTC+CGG | 0.552793 | 8_3:-54844753 | None:intergenic |
| ACAGAAGCAAGATTATAAGA+TGG | 0.553869 | 8_3:+54845285 | Msa1296090:intron |
| ACCGTAGATTGACTCGCCGC+CGG | 0.554056 | 8_3:-54844514 | None:intergenic |
| TGGGGAGATTGCTGAAGGGG+AGG | 0.554625 | 8_3:+54844782 | Msa1296090:CDS |
| TGTTTGGGAAGGTTGTGAAA+GGG | 0.554643 | 8_3:+54844679 | Msa1296090:CDS |
| TTTGGACATGTGTTGGGAGA+AGG | 0.556697 | 8_3:+54845339 | Msa1296090:CDS |
| CTTGAAATGGAGAGGGACGT+TGG | 0.557692 | 8_3:-54844421 | None:intergenic |
| GACCTAAAACACGAACGGAA+AGG | 0.557928 | 8_3:+54844561 | Msa1296090:CDS |
| GTACGCAATTGCCAGGAAGA+AGG | 0.562491 | 8_3:+54847737 | Msa1296090:CDS |
| TGTGATACTTACCGAACTGT+TGG | 0.563843 | 8_3:-54845541 | None:intergenic |
| CGAGGACGCCGCATTTGGAT+GGG | 0.564333 | 8_3:+54844646 | Msa1296090:CDS |
| GTTTGGACCGGTATTCGCCA+TGG | 0.566119 | 8_3:-54844592 | None:intergenic |
| CTCTGTTATAGAAAATCACT+GGG | 0.567299 | 8_3:-54848117 | None:intergenic |
| ACCGGCGGCGAGTCAATCTA+CGG | 0.568908 | 8_3:+54844513 | Msa1296090:CDS |
| GAAGCATGTGGTGTTTGGGA+AGG | 0.570028 | 8_3:+54844668 | Msa1296090:CDS |
| ATGGATTTCTTGAAATGGAG+AGG | 0.571440 | 8_3:-54844429 | None:intergenic |
| GTCAAAGGCTTCATGATCCA+AGG | 0.574138 | 8_3:+54844465 | Msa1296090:CDS |
| CATACACCATATCCGCATCA+AGG | 0.575826 | 8_3:-54847909 | None:intergenic |
| TGGATTTCTTGAAATGGAGA+GGG | 0.579737 | 8_3:-54844428 | None:intergenic |
| TCCGCCTCCGACGGAACCGG+CGG | 0.580073 | 8_3:+54844498 | Msa1296090:CDS |
| GGTGACATCTCCGCCTCCGA+CGG | 0.583678 | 8_3:+54844489 | Msa1296090:CDS |
| GATTGTGGGGAGATTGCTGA+AGG | 0.584654 | 8_3:+54844777 | Msa1296090:CDS |
| GGATATGGTGTATGTGGCGA+TGG | 0.608582 | 8_3:+54847918 | Msa1296090:three_prime_UTR |
| TTCTTCGACATCAGCATCGG+CGG | 0.611545 | 8_3:+54844291 | Msa1296090:CDS |
| GGTTGGGGAGAACGATCGAC+CGG | 0.612883 | 8_3:+54844734 | Msa1296090:CDS |
| GACATGTGTTGGGAGAAGGA+TGG | 0.614412 | 8_3:+54845343 | Msa1296090:CDS |
| ATGTTCAATTAGCCTTGATG+CGG | 0.622340 | 8_3:+54847897 | Msa1296090:exon |
| TCATGAAGCCTTTGACGACA+CGG | 0.625678 | 8_3:-54844458 | None:intergenic |
| TGTTGATCTTGATACCAAGC+CGG | 0.625762 | 8_3:+54844857 | Msa1296090:CDS |
| AATACCGGTCCAAACACCAA+TGG | 0.627525 | 8_3:+54844600 | Msa1296090:CDS |
| TGTTGTGATTGCTGATTGTG+GGG | 0.627931 | 8_3:+54844764 | Msa1296090:CDS |
| AGCCGGAGGAGCTTGAATGG+TGG | 0.631915 | 8_3:+54844874 | Msa1296090:CDS |
| TGATGCGGATATGGTGTATG+TGG | 0.632119 | 8_3:+54847912 | Msa1296090:three_prime_UTR |
| AGCATCGGCGGCGAACTCGA+GGG | 0.632241 | 8_3:+54844303 | Msa1296090:CDS |
| AATTTCCGATCTCTCTGCAC+CGG | 0.632806 | 8_3:+54844375 | Msa1296090:CDS |
| ATTTCGACCTAAAACACGAA+CGG | 0.634503 | 8_3:+54844556 | Msa1296090:CDS |
| TCGGACTTTGCAATGCACGA+TGG | 0.636187 | 8_3:+54846307 | Msa1296090:CDS |
| AATGCTGTTGAATCTATCAA+GGG | 0.636468 | 8_3:+54844900 | Msa1296090:CDS |
| ATTGTGGGGAGATTGCTGAA+GGG | 0.637501 | 8_3:+54844778 | Msa1296090:CDS |
| TGGAGAGGGACGTTGGTGTG+TGG | 0.640483 | 8_3:-54844414 | None:intergenic |
| GTATATGTTACTCAATGACC+TGG | 0.641203 | 8_3:+54847031 | Msa1296090:CDS |
| GCAAAAGCTCTGTTTCGCAA+AGG | 0.644842 | 8_3:+54846337 | Msa1296090:CDS |
| GAGAAGGATGGTGTTGACCA+AGG | 0.659869 | 8_3:+54845355 | Msa1296090:CDS |
| ACATGCTTCCCATCCAAATG+CGG | 0.664004 | 8_3:-54844654 | None:intergenic |
| TGATCTTGATACCAAGCCGG+AGG | 0.689161 | 8_3:+54844860 | Msa1296090:CDS |
| TTAAAATTAGGTGACCTCAG+TGG | 0.703190 | 8_3:+54846271 | Msa1296090:CDS |
| GCATTTGGATGGGAAGCATG+TGG | 0.713375 | 8_3:+54844656 | Msa1296090:CDS |
| TGAAGCCTTTGACGACACGG+TGG | 0.743535 | 8_3:-54844455 | None:intergenic |
| TCTCTTGAAGCTATCCAGAG+CGG | 0.756413 | 8_3:-54847057 | None:intergenic |
| AAAGGCTTCATGATCCAAGG+CGG | 0.764461 | 8_3:+54844468 | Msa1296090:CDS |
| AATCAAGTAAAGCTCCACTG+AGG | 0.768633 | 8_3:-54846285 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATGTTTTAGTTTTATTT+GGG | + | chr8_3:54845184-54845203 | Msa1296090:intron | 10.0% |
| !! | AAATTACTATATATAATACA+TGG | - | chr8_3:54846978-54846997 | None:intergenic | 10.0% |
| !!! | GTTATTAACTTTTTTAAAGA+TGG | + | chr8_3:54844813-54844832 | Msa1296090:CDS | 15.0% |
| !!! | CTTAATGTTTTAGTTTTATT+TGG | + | chr8_3:54845183-54845202 | Msa1296090:intron | 15.0% |
| !!! | TAAATGTGAATTAAATTTTC+AGG | + | chr8_3:54846240-54846259 | Msa1296090:intron | 15.0% |
| !!! | TCATGTTTTGTAAATTTAGT+TGG | + | chr8_3:54845903-54845922 | Msa1296090:intron | 20.0% |
| !! | AGTATTTGTAAAGAAAACAT+GGG | - | chr8_3:54846005-54846024 | None:intergenic | 20.0% |
| !! | AAGTATTTGTAAAGAAAACA+TGG | - | chr8_3:54846006-54846025 | None:intergenic | 20.0% |
| !! | ACAAATTGACAAAAAGTTTA+AGG | + | chr8_3:54846647-54846666 | Msa1296090:intron | 20.0% |
| !! | CAAATTGACAAAAAGTTTAA+GGG | + | chr8_3:54846648-54846667 | Msa1296090:intron | 20.0% |
| !! | AAATTGACAAAAAGTTTAAG+GGG | + | chr8_3:54846649-54846668 | Msa1296090:intron | 20.0% |
| !! | TAAAGTAGCAAATTACAATT+CGG | - | chr8_3:54846742-54846761 | None:intergenic | 20.0% |
| !!! | GTAATTTGCTATTTGTTTTT+TGG | + | chr8_3:54846991-54847010 | Msa1296090:intron | 20.0% |
| !! | AATTACTTTCTTATAACACT+GGG | + | chr8_3:54847193-54847212 | Msa1296090:intron | 20.0% |
| !! | TTCATATAGAAACATATCTT+TGG | + | chr8_3:54847287-54847306 | Msa1296090:intron | 20.0% |
| !!! | CAAAGTTAATTTGATATTTC+TGG | + | chr8_3:54847664-54847683 | Msa1296090:intron | 20.0% |
| !!! | GTTTTTTCTTAAATGGTATT+AGG | + | chr8_3:54848185-54848204 | Msa1296090:three_prime_UTR | 20.0% |
| !! | AAATTTTCGTCTTCGAAATT+TGG | - | chr8_3:54844540-54844559 | None:intergenic | 25.0% |
| ! | ATAAGGTGAATTTCAAAGAA+TGG | + | chr8_3:54844940-54844959 | Msa1296090:intron | 25.0% |
| ! | TCAAAGAATGGTTATAGAAT+AGG | + | chr8_3:54844952-54844971 | Msa1296090:intron | 25.0% |
| ! | CAAAGAATGGTTATAGAATA+GGG | + | chr8_3:54844953-54844972 | Msa1296090:intron | 25.0% |
| ! | TTGATGCATATCTTTGTTAA+AGG | + | chr8_3:54844996-54845015 | Msa1296090:intron | 25.0% |
| ! | AATAATCGAAAACAACAATG+AGG | - | chr8_3:54845028-54845047 | None:intergenic | 25.0% |
| ! | CAAATAAAAGATACACACTA+GGG | - | chr8_3:54845055-54845074 | None:intergenic | 25.0% |
| ! | ACTAAAACATTAAGCTTACA+TGG | - | chr8_3:54845177-54845196 | None:intergenic | 25.0% |
| !!! | AGTTTTATTTGGGAATATAG+TGG | + | chr8_3:54845194-54845213 | Msa1296090:intron | 25.0% |
| !! | TTTCATCATTTTATGTGACT+AGG | + | chr8_3:54845565-54845584 | Msa1296090:intron | 25.0% |
| !! | TTCATCATTTTATGTGACTA+GGG | + | chr8_3:54845566-54845585 | Msa1296090:intron | 25.0% |
| !! | AAAATCATGAGAAGAGTTTT+AGG | - | chr8_3:54845710-54845729 | None:intergenic | 25.0% |
| ! | AGCAATCAATTATTGAAAGT+CGG | - | chr8_3:54845756-54845775 | None:intergenic | 25.0% |
| !!! | AAGACTTTAGTTTTGGAAAT+TGG | + | chr8_3:54845820-54845839 | Msa1296090:intron | 25.0% |
| !!! | AGACTTTAGTTTTGGAAATT+GGG | + | chr8_3:54845821-54845840 | Msa1296090:intron | 25.0% |
| ! | TAGTAAAATAGTCATTCACA+AGG | - | chr8_3:54845976-54845995 | None:intergenic | 25.0% |
| ! | TTACAAATACTTACTCTCTT+AGG | + | chr8_3:54846014-54846033 | Msa1296090:intron | 25.0% |
| ! | TACAAATACTTACTCTCTTA+GGG | + | chr8_3:54846015-54846034 | Msa1296090:intron | 25.0% |
| !!! | GTCACCTAATTTTAATTTAC+AGG | - | chr8_3:54846266-54846285 | None:intergenic | 25.0% |
| ! | ATAGATGACATTGTTAAACA+CGG | - | chr8_3:54846416-54846435 | None:intergenic | 25.0% |
| !!! | AATTTGATGGTTTTGACTTT+TGG | - | chr8_3:54846793-54846812 | None:intergenic | 25.0% |
| ! | AGTCAAAACCATCAAATTTA+TGG | + | chr8_3:54846795-54846814 | Msa1296090:intron | 25.0% |
| ! | GTCAAAACCATCAAATTTAT+GGG | + | chr8_3:54846796-54846815 | Msa1296090:intron | 25.0% |
| ! | CTATATATAATACATGGCTA+TGG | - | chr8_3:54846972-54846991 | None:intergenic | 25.0% |
| ! | CAATTACTTTCTTATAACAC+TGG | + | chr8_3:54847192-54847211 | Msa1296090:intron | 25.0% |
| ! | ATTACTTTCTTATAACACTG+GGG | + | chr8_3:54847194-54847213 | Msa1296090:intron | 25.0% |
| ! | GATTAAAGACAACAATGAAA+GGG | - | chr8_3:54847405-54847424 | None:intergenic | 25.0% |
| ! | TGATTAAAGACAACAATGAA+AGG | - | chr8_3:54847406-54847425 | None:intergenic | 25.0% |
| ! | ATTTCATGTTGAATTGATTG+TGG | - | chr8_3:54847490-54847509 | None:intergenic | 25.0% |
| ! | TTAACAAGTCAAAGTGTAAA+TGG | + | chr8_3:54847524-54847543 | Msa1296090:intron | 25.0% |
| ! | ATGTTTCATTTCATACACAA+AGG | - | chr8_3:54847578-54847597 | None:intergenic | 25.0% |
| !! | TTTATTCTGTTTACTGCTTT+TGG | + | chr8_3:54847826-54847845 | Msa1296090:intron | 25.0% |
| !!! | TCTACTCGTTTTTTCTTAAA+TGG | + | chr8_3:54848178-54848197 | Msa1296090:three_prime_UTR | 25.0% |
| ! | AATAAAAAACTGACTCCCAT+TGG | - | chr8_3:54844619-54844638 | None:intergenic | 30.0% |
| AATGCTGTTGAATCTATCAA+GGG | + | chr8_3:54844900-54844919 | Msa1296090:CDS | 30.0% | |
| ! | CTTTGGAAATGAACACTATA+AGG | + | chr8_3:54844923-54844942 | Msa1296090:CDS | 30.0% |
| CCAAATAAAAGATACACACT+AGG | - | chr8_3:54845056-54845075 | None:intergenic | 30.0% | |
| ! | CCTAGTGTGTATCTTTTATT+TGG | + | chr8_3:54845053-54845072 | Msa1296090:intron | 30.0% |
| TAATCAGCAGATCATAAGAA+TGG | - | chr8_3:54845230-54845249 | None:intergenic | 30.0% | |
| ACAGAAGCAAGATTATAAGA+TGG | + | chr8_3:54845285-54845304 | Msa1296090:intron | 30.0% | |
| AGAAAAACAGTAAGTAACCA+CGG | - | chr8_3:54845436-54845455 | None:intergenic | 30.0% | |
| TCAAATCTTTACCAACAGTT+CGG | + | chr8_3:54845530-54845549 | Msa1296090:CDS | 30.0% | |
| !! | TGCATTCAAGACTTTAGTTT+TGG | + | chr8_3:54845813-54845832 | Msa1296090:intron | 30.0% |
| TAAAATAGTCATTCACAAGG+TGG | - | chr8_3:54845973-54845992 | None:intergenic | 30.0% | |
| AGAATGTGACACATTATAAC+AGG | - | chr8_3:54846183-54846202 | None:intergenic | 30.0% | |
| CAGGCCTGTAAATTAAAATT+AGG | + | chr8_3:54846259-54846278 | Msa1296090:intron | 30.0% | |
| AGAGTTTCAATAGAGAAAGT+AGG | + | chr8_3:54846380-54846399 | Msa1296090:intron | 30.0% | |
| ! | CATAGAACTTTTATGCTACT+AGG | + | chr8_3:54846514-54846533 | Msa1296090:intron | 30.0% |
| CTGGTGTGAATTGTTTAATA+GGG | + | chr8_3:54846579-54846598 | Msa1296090:intron | 30.0% | |
| AATTGTTTAATAGGGAGGAA+AGG | + | chr8_3:54846587-54846606 | Msa1296090:intron | 30.0% | |
| ATTGTTTAATAGGGAGGAAA+GGG | + | chr8_3:54846588-54846607 | Msa1296090:intron | 30.0% | |
| AATTTGTACCAAGATGGATA+GGG | - | chr8_3:54846634-54846653 | None:intergenic | 30.0% | |
| TTTGTCAATTTGTACCAAGA+TGG | - | chr8_3:54846640-54846659 | None:intergenic | 30.0% | |
| TTACAATTCGGTACTTAAGA+AGG | - | chr8_3:54846730-54846749 | None:intergenic | 30.0% | |
| TGATAACTATAACCAGTCAT+AGG | + | chr8_3:54846914-54846933 | Msa1296090:intron | 30.0% | |
| GATAACTATAACCAGTCATA+GGG | + | chr8_3:54846915-54846934 | Msa1296090:intron | 30.0% | |
| ATAACTATAACCAGTCATAG+GGG | + | chr8_3:54846916-54846935 | Msa1296090:intron | 30.0% | |
| !! | TTTTTGGTCTGCTTAATTTC+AGG | + | chr8_3:54847007-54847026 | Msa1296090:intron | 30.0% |
| TTTATTTCATTCATTGCCTG+TGG | + | chr8_3:54847133-54847152 | Msa1296090:intron | 30.0% | |
| GTCAAAGTGTAAATGGAATT+AGG | + | chr8_3:54847531-54847550 | Msa1296090:intron | 30.0% | |
| ATTGAGATCCAAAACATCTT+TGG | + | chr8_3:54847604-54847623 | Msa1296090:intron | 30.0% | |
| ! | GTCATAATCCAAAGATGTTT+TGG | - | chr8_3:54847615-54847634 | None:intergenic | 30.0% |
| GAAATGGTAAAGGAAGAAAA+AGG | - | chr8_3:54847774-54847793 | None:intergenic | 30.0% | |
| ! | CTGAAACAATCAGATTTTTG+TGG | + | chr8_3:54847942-54847961 | Msa1296090:three_prime_UTR | 30.0% |
| CTCTGTTATAGAAAATCACT+GGG | - | chr8_3:54848120-54848139 | None:intergenic | 30.0% | |
| TCTCTGTTATAGAAAATCAC+TGG | - | chr8_3:54848121-54848140 | None:intergenic | 30.0% | |
| TGGATTTCTTGAAATGGAGA+GGG | - | chr8_3:54844431-54844450 | None:intergenic | 35.0% | |
| ATGGATTTCTTGAAATGGAG+AGG | - | chr8_3:54844432-54844451 | None:intergenic | 35.0% | |
| ! | GGAAGATGGATTTCTTGAAA+TGG | - | chr8_3:54844437-54844456 | None:intergenic | 35.0% |
| ATTTCGACCTAAAACACGAA+CGG | + | chr8_3:54844556-54844575 | Msa1296090:CDS | 35.0% | |
| ! | ATTTTATCCATGGCGAATAC+CGG | + | chr8_3:54844585-54844604 | Msa1296090:CDS | 35.0% |
| !!! | AGTTTTTTATTACGACGACG+AGG | + | chr8_3:54844628-54844647 | Msa1296090:CDS | 35.0% |
| ! | ATGTTGTGATTGCTGATTGT+GGG | + | chr8_3:54844763-54844782 | Msa1296090:CDS | 35.0% |
| ! | ATGGTGATACTTTTGCTGAT+TGG | + | chr8_3:54844832-54844851 | Msa1296090:CDS | 35.0% |
| GAATGCTGTTGAATCTATCA+AGG | + | chr8_3:54844899-54844918 | Msa1296090:CDS | 35.0% | |
| !! | GATCTGTGCTATTCTGTTTT+TGG | + | chr8_3:54845404-54845423 | Msa1296090:intron | 35.0% |
| TTCTCTAGTAACTCATCTCT+TGG | + | chr8_3:54845455-54845474 | Msa1296090:intron | 35.0% | |
| GACTTGTCTCATCAACTATT+AGG | + | chr8_3:54845597-54845616 | Msa1296090:intron | 35.0% | |
| AACTACACAACTAAAGCTTG+TGG | - | chr8_3:54845664-54845683 | None:intergenic | 35.0% | |
| ! | AGCTTTAGTTGTGTAGTTAG+AGG | + | chr8_3:54845666-54845685 | Msa1296090:intron | 35.0% |
| ATCAATTATTGAAAGTCGGC+TGG | - | chr8_3:54845752-54845771 | None:intergenic | 35.0% | |
| TAGGTCTGCATGATTCAAAA+TGG | + | chr8_3:54846136-54846155 | Msa1296090:intron | 35.0% | |
| TTAAAATTAGGTGACCTCAG+TGG | + | chr8_3:54846271-54846290 | Msa1296090:CDS | 35.0% | |
| GCATACAATATGACTGTATG+AGG | - | chr8_3:54846560-54846579 | None:intergenic | 35.0% | |
| CATACAGTCATATTGTATGC+TGG | + | chr8_3:54846560-54846579 | Msa1296090:intron | 35.0% | |
| GCTGGTGTGAATTGTTTAAT+AGG | + | chr8_3:54846578-54846597 | Msa1296090:intron | 35.0% | |
| GTGTGAATTGTTTAATAGGG+AGG | + | chr8_3:54846582-54846601 | Msa1296090:intron | 35.0% | |
| CAATTTGTACCAAGATGGAT+AGG | - | chr8_3:54846635-54846654 | None:intergenic | 35.0% | |
| TGACAAAAAGTTTAAGGGGA+AGG | + | chr8_3:54846653-54846672 | Msa1296090:intron | 35.0% | |
| GACAAAAAGTTTAAGGGGAA+GGG | + | chr8_3:54846654-54846673 | Msa1296090:intron | 35.0% | |
| !!! | TTGATGGTTTTGACTTTTGG+AGG | - | chr8_3:54846790-54846809 | None:intergenic | 35.0% |
| CAGACTTCCCATAAATTTGA+TGG | - | chr8_3:54846806-54846825 | None:intergenic | 35.0% | |
| TTCTGTAAGAAAAAGGGGAA+GGG | - | chr8_3:54846877-54846896 | None:intergenic | 35.0% | |
| GGTTATAGTTATCAATTCCC+TGG | - | chr8_3:54846908-54846927 | None:intergenic | 35.0% | |
| GTATATGTTACTCAATGACC+TGG | + | chr8_3:54847031-54847050 | Msa1296090:CDS | 35.0% | |
| AATAGTCACCAACCATCATT+TGG | - | chr8_3:54847098-54847117 | None:intergenic | 35.0% | |
| !! | TGAAAAGCATTTATGACCAC+AGG | - | chr8_3:54847152-54847171 | None:intergenic | 35.0% |
| TTGAGTGTAATGAACTTCCT+GGG | + | chr8_3:54847235-54847254 | Msa1296090:intron | 35.0% | |
| ! | AAACATATCTTTGGCTTACC+AGG | + | chr8_3:54847296-54847315 | Msa1296090:intron | 35.0% |
| ! | AACATATCTTTGGCTTACCA+GGG | + | chr8_3:54847297-54847316 | Msa1296090:intron | 35.0% |
| GAAGGAGTCTATTCATGATA+AGG | + | chr8_3:54847322-54847341 | Msa1296090:intron | 35.0% | |
| ! | ACTATTTCTTGTCTCGACAT+CGG | - | chr8_3:54847349-54847368 | None:intergenic | 35.0% |
| CGTTTGTAAATCATCCTGTT+CGG | + | chr8_3:54847435-54847454 | Msa1296090:intron | 35.0% | |
| GTTTGTAAATCATCCTGTTC+GGG | + | chr8_3:54847436-54847455 | Msa1296090:intron | 35.0% | |
| ATTGTGGAAATGATGTGACT+TGG | - | chr8_3:54847474-54847493 | None:intergenic | 35.0% | |
| ! | GACAGCATTTGAAATGGTAA+AGG | - | chr8_3:54847784-54847803 | None:intergenic | 35.0% |
| GAACAAGACAGCATTTGAAA+TGG | - | chr8_3:54847790-54847809 | None:intergenic | 35.0% | |
| !! | TGTTTACTGCTTTTGGTTAC+AGG | + | chr8_3:54847833-54847852 | Msa1296090:intron | 35.0% |
| !! | ATGTTCAATTAGCCTTGATG+CGG | + | chr8_3:54847897-54847916 | Msa1296090:exon | 35.0% |
| GCTCAAAGAGTTTGTCAAAA+TGG | - | chr8_3:54848093-54848112 | None:intergenic | 35.0% | |
| TGATGTCGAAGAAGACTCTT+GGG | - | chr8_3:54844284-54844303 | None:intergenic | 40.0% | |
| ! | GCAGAGAGATCGGAAATTTT+CGG | - | chr8_3:54844373-54844392 | None:intergenic | 40.0% |
| ACCTAAAACACGAACGGAAA+GGG | + | chr8_3:54844562-54844581 | Msa1296090:CDS | 40.0% | |
| ! | ACGGAAAGGGATTTTATCCA+TGG | + | chr8_3:54844575-54844594 | Msa1296090:CDS | 40.0% |
| TGTTTGGGAAGGTTGTGAAA+GGG | + | chr8_3:54844679-54844698 | Msa1296090:CDS | 40.0% | |
| TGAAAGGGATTGGAGTTGTT+AGG | + | chr8_3:54844694-54844713 | Msa1296090:CDS | 40.0% | |
| ! | GATGTTGTGATTGCTGATTG+TGG | + | chr8_3:54844762-54844781 | Msa1296090:CDS | 40.0% |
| ! | TGTTGTGATTGCTGATTGTG+GGG | + | chr8_3:54844764-54844783 | Msa1296090:CDS | 40.0% |
| TGTTGATCTTGATACCAAGC+CGG | + | chr8_3:54844857-54844876 | Msa1296090:CDS | 40.0% | |
| GTTGAATCTATCAAGGGCTT+TGG | + | chr8_3:54844906-54844925 | Msa1296090:CDS | 40.0% | |
| !!! | GGGAATATAGTGGCTAGTTT+TGG | + | chr8_3:54845204-54845223 | Msa1296090:intron | 40.0% |
| ! | TGATCTGCTGATTACCTTTG+TGG | + | chr8_3:54845236-54845255 | Msa1296090:intron | 40.0% |
| AATGCATCAGCATACCACAA+AGG | - | chr8_3:54845253-54845272 | None:intergenic | 40.0% | |
| !! | GGCTATCAAAAAGTATCGCA+AGG | + | chr8_3:54845306-54845325 | Msa1296090:CDS | 40.0% |
| TGTGATACTTACCGAACTGT+TGG | - | chr8_3:54845544-54845563 | None:intergenic | 40.0% | |
| ACCCAAATTGCACACTTGAT+TGG | + | chr8_3:54845879-54845898 | Msa1296090:intron | 40.0% | |
| GCCAATCAAGTGTGCAATTT+GGG | - | chr8_3:54845883-54845902 | None:intergenic | 40.0% | |
| AGCCAATCAAGTGTGCAATT+TGG | - | chr8_3:54845884-54845903 | None:intergenic | 40.0% | |
| ATAGTCATTCACAAGGTGGT+AGG | - | chr8_3:54845969-54845988 | None:intergenic | 40.0% | |
| AAGCAGACCTACTCAGAAAA+GGG | - | chr8_3:54846108-54846127 | None:intergenic | 40.0% | |
| TAGGTCTGCTTCATTCAACT+AGG | + | chr8_3:54846117-54846136 | Msa1296090:intron | 40.0% | |
| AATCAAGTAAAGCTCCACTG+AGG | - | chr8_3:54846288-54846307 | None:intergenic | 40.0% | |
| CAGTGGAGCTTTACTTGATT+CGG | + | chr8_3:54846288-54846307 | Msa1296090:CDS | 40.0% | |
| TCTATTGAAAGATGCCAACC+TGG | - | chr8_3:54846363-54846382 | None:intergenic | 40.0% | |
| TTAATAGGGAGGAAAGGGTA+AGG | + | chr8_3:54846593-54846612 | Msa1296090:intron | 40.0% | |
| AGGAAAGGGTAAGGAAAAGA+AGG | + | chr8_3:54846602-54846621 | Msa1296090:intron | 40.0% | |
| GGAAAGGGTAAGGAAAAGAA+GGG | + | chr8_3:54846603-54846622 | Msa1296090:intron | 40.0% | |
| TAAGAAAAAGGGGAAGGGAA+TGG | - | chr8_3:54846872-54846891 | None:intergenic | 40.0% | |
| GTTCTGTAAGAAAAAGGGGA+AGG | - | chr8_3:54846878-54846897 | None:intergenic | 40.0% | |
| TGGGGGTTCTGTAAGAAAAA+GGG | - | chr8_3:54846883-54846902 | None:intergenic | 40.0% | |
| AGTTATCAATTCCCTGGTCT+GGG | - | chr8_3:54846902-54846921 | None:intergenic | 40.0% | |
| TAGTTATCAATTCCCTGGTC+TGG | - | chr8_3:54846903-54846922 | None:intergenic | 40.0% | |
| CATGATATATCCCCTATGAC+TGG | - | chr8_3:54846929-54846948 | None:intergenic | 40.0% | |
| !! | CTTCAAGAGAGCATTAGAGT+TGG | + | chr8_3:54847070-54847089 | Msa1296090:CDS | 40.0% |
| TTAGAGTTGGAGCCAAATGA+TGG | + | chr8_3:54847083-54847102 | Msa1296090:CDS | 40.0% | |
| GTTGAGTGTAATGAACTTCC+TGG | + | chr8_3:54847234-54847253 | Msa1296090:intron | 40.0% | |
| ! | TACAGCTTTATCAAGAACCC+AGG | - | chr8_3:54847255-54847274 | None:intergenic | 40.0% |
| GGGTTCTTGATAAAGCTGTA+AGG | + | chr8_3:54847255-54847274 | Msa1296090:intron | 40.0% | |
| ! | CTATTTCTTGTCTCGACATC+GGG | - | chr8_3:54847348-54847367 | None:intergenic | 40.0% |
| AGACAACAATGAAAGGGTGA+GGG | - | chr8_3:54847399-54847418 | None:intergenic | 40.0% | |
| AAGACAACAATGAAAGGGTG+AGG | - | chr8_3:54847400-54847419 | None:intergenic | 40.0% | |
| ! | AAAAAGAGTACGCAATTGCC+AGG | + | chr8_3:54847730-54847749 | Msa1296090:CDS | 40.0% |
| TGTATTACTGACCTTCTTCC+TGG | - | chr8_3:54847751-54847770 | None:intergenic | 40.0% | |
| GGTTGCTGATAGACATGATA+AGG | + | chr8_3:54847854-54847873 | Msa1296090:intron | 40.0% | |
| !! | AATTAGCCTTGATGCGGATA+TGG | + | chr8_3:54847903-54847922 | Msa1296090:exon | 40.0% |
| GAAAACTTGTCAGTTGTGAC+TGG | - | chr8_3:54848212-54848231 | None:intergenic | 40.0% | |
| ! | ACTCTTGGGTTCGGCATTTT+CGG | - | chr8_3:54844270-54844289 | None:intergenic | 45.0% |
| TCGAAGAAGACTCTTGGGTT+CGG | - | chr8_3:54844279-54844298 | None:intergenic | 45.0% | |
| CTGATGTCGAAGAAGACTCT+TGG | - | chr8_3:54844285-54844304 | None:intergenic | 45.0% | |
| GTCTTCTTCGACATCAGCAT+CGG | + | chr8_3:54844288-54844307 | Msa1296090:CDS | 45.0% | |
| ! | CGGAAATTTTCGGCGGTTTT+GGG | - | chr8_3:54844363-54844382 | None:intergenic | 45.0% |
| ! | TCGGAAATTTTCGGCGGTTT+TGG | - | chr8_3:54844364-54844383 | None:intergenic | 45.0% |
| ! | GAGAGATCGGAAATTTTCGG+CGG | - | chr8_3:54844370-54844389 | None:intergenic | 45.0% |
| AATTTCCGATCTCTCTGCAC+CGG | + | chr8_3:54844375-54844394 | Msa1296090:CDS | 45.0% | |
| TCATGAAGCCTTTGACGACA+CGG | - | chr8_3:54844461-54844480 | None:intergenic | 45.0% | |
| GTCAAAGGCTTCATGATCCA+AGG | + | chr8_3:54844465-54844484 | Msa1296090:CDS | 45.0% | |
| AAAGGCTTCATGATCCAAGG+CGG | + | chr8_3:54844468-54844487 | Msa1296090:CDS | 45.0% | |
| GACCTAAAACACGAACGGAA+AGG | + | chr8_3:54844561-54844580 | Msa1296090:CDS | 45.0% | |
| ! | TCCCTTTCCGTTCGTGTTTT+AGG | - | chr8_3:54844566-54844585 | None:intergenic | 45.0% |
| AATACCGGTCCAAACACCAA+TGG | + | chr8_3:54844600-54844619 | Msa1296090:CDS | 45.0% | |
| ATACCGGTCCAAACACCAAT+GGG | + | chr8_3:54844601-54844620 | Msa1296090:CDS | 45.0% | |
| ! | AACTGACTCCCATTGGTGTT+TGG | - | chr8_3:54844612-54844631 | None:intergenic | 45.0% |
| ACATGCTTCCCATCCAAATG+CGG | - | chr8_3:54844657-54844676 | None:intergenic | 45.0% | |
| ! | ATGGGAAGCATGTGGTGTTT+GGG | + | chr8_3:54844664-54844683 | Msa1296090:CDS | 45.0% |
| GTGTTTGGGAAGGTTGTGAA+AGG | + | chr8_3:54844678-54844697 | Msa1296090:CDS | 45.0% | |
| GTTGTTAGGTCTGTTGAGCT+TGG | + | chr8_3:54844708-54844727 | Msa1296090:CDS | 45.0% | |
| ATTGTGGGGAGATTGCTGAA+GGG | + | chr8_3:54844778-54844797 | Msa1296090:CDS | 45.0% | |
| ! | GGCTTGGTATCAAGATCAAC+AGG | - | chr8_3:54844858-54844877 | None:intergenic | 45.0% |
| TGCGCTATTTGGACATGTGT+TGG | + | chr8_3:54845332-54845351 | Msa1296090:CDS | 45.0% | |
| GCGCTATTTGGACATGTGTT+GGG | + | chr8_3:54845333-54845352 | Msa1296090:CDS | 45.0% | |
| TTTGGACATGTGTTGGGAGA+AGG | + | chr8_3:54845339-54845358 | Msa1296090:CDS | 45.0% | |
| AAACTAACGAGAACCGACCT+TGG | - | chr8_3:54845375-54845394 | None:intergenic | 45.0% | |
| !!! | TCTGTTTTTGGTTGTTGCCG+TGG | + | chr8_3:54845416-54845435 | Msa1296090:intron | 45.0% |
| !! | CAGAGAAGAGCACTGCTTTA+AGG | + | chr8_3:54845496-54845515 | Msa1296090:intron | 45.0% |
| CTCTTAGGGCCAAACTAACA+AGG | + | chr8_3:54846029-54846048 | Msa1296090:intron | 45.0% | |
| TAGGGCCAAACTAACAAGGT+TGG | + | chr8_3:54846033-54846052 | Msa1296090:intron | 45.0% | |
| ! | GCCAAACTAACAAGGTTGGT+GGG | + | chr8_3:54846037-54846056 | Msa1296090:intron | 45.0% |
| !! | CCAAACTAACAAGGTTGGTG+GGG | + | chr8_3:54846038-54846057 | Msa1296090:intron | 45.0% |
| !! | CAAACTAACAAGGTTGGTGG+GGG | + | chr8_3:54846039-54846058 | Msa1296090:intron | 45.0% |
| GAAGCAGACCTACTCAGAAA+AGG | - | chr8_3:54846109-54846128 | None:intergenic | 45.0% | |
| GCAAAAGCTCTGTTTCGCAA+AGG | + | chr8_3:54846337-54846356 | Msa1296090:CDS | 45.0% | |
| GGGTAAAACCCTATCCATCT+TGG | + | chr8_3:54846623-54846642 | Msa1296090:intron | 45.0% | |
| GGGGGTTCTGTAAGAAAAAG+GGG | - | chr8_3:54846882-54846901 | None:intergenic | 45.0% | |
| CTGGGGGTTCTGTAAGAAAA+AGG | - | chr8_3:54846884-54846903 | None:intergenic | 45.0% | |
| TTATCAATTCCCTGGTCTGG+GGG | - | chr8_3:54846900-54846919 | None:intergenic | 45.0% | |
| GTTATCAATTCCCTGGTCTG+GGG | - | chr8_3:54846901-54846920 | None:intergenic | 45.0% | |
| TCTCTTGAAGCTATCCAGAG+CGG | - | chr8_3:54847060-54847079 | None:intergenic | 45.0% | |
| AGTTGGAGCCAAATGATGGT+TGG | + | chr8_3:54847087-54847106 | Msa1296090:intron | 45.0% | |
| TTATAACACTGGGGTCCTGA+GGG | + | chr8_3:54847203-54847222 | Msa1296090:intron | 45.0% | |
| TGAATAGACTCCTTCAACCC+TGG | - | chr8_3:54847317-54847336 | None:intergenic | 45.0% | |
| ! | GAGGATTTGTTTACCCGAAC+AGG | - | chr8_3:54847452-54847471 | None:intergenic | 45.0% |
| ! | GTGGAAATGATGTGACTTGG+AGG | - | chr8_3:54847471-54847490 | None:intergenic | 45.0% |
| CATACCTTGCTCTGTTCTTC+AGG | + | chr8_3:54847699-54847718 | Msa1296090:intron | 45.0% | |
| CATACACCATATCCGCATCA+AGG | - | chr8_3:54847912-54847931 | None:intergenic | 45.0% | |
| TGATGCGGATATGGTGTATG+TGG | + | chr8_3:54847912-54847931 | Msa1296090:three_prime_UTR | 45.0% | |
| ! | GTTCGGCATTTTCGGAAGAG+AGG | - | chr8_3:54844262-54844281 | None:intergenic | 50.0% |
| ! | TTCTTCGACATCAGCATCGG+CGG | + | chr8_3:54844291-54844310 | Msa1296090:CDS | 50.0% |
| CTTGAAATGGAGAGGGACGT+TGG | - | chr8_3:54844424-54844443 | None:intergenic | 50.0% | |
| TTTGACGACACGGTGGAAGA+TGG | - | chr8_3:54844451-54844470 | None:intergenic | 50.0% | |
| ATCTTCCACCGTGTCGTCAA+AGG | + | chr8_3:54844450-54844469 | Msa1296090:CDS | 50.0% | |
| ! | ACTCCCATTGGTGTTTGGAC+CGG | - | chr8_3:54844607-54844626 | None:intergenic | 50.0% |
| ! | GCATTTGGATGGGAAGCATG+TGG | + | chr8_3:54844656-54844675 | Msa1296090:CDS | 50.0% |
| ! | GATGGGAAGCATGTGGTGTT+TGG | + | chr8_3:54844663-54844682 | Msa1296090:CDS | 50.0% |
| GAAGCATGTGGTGTTTGGGA+AGG | + | chr8_3:54844668-54844687 | Msa1296090:CDS | 50.0% | |
| GGGAAGGTTGTGAAAGGGAT+TGG | + | chr8_3:54844684-54844703 | Msa1296090:CDS | 50.0% | |
| TAGGTCTGTTGAGCTTGGTC+CGG | + | chr8_3:54844713-54844732 | Msa1296090:CDS | 50.0% | |
| GCAATCACAACATCCTGCTC+CGG | - | chr8_3:54844756-54844775 | None:intergenic | 50.0% | |
| GATTGTGGGGAGATTGCTGA+AGG | + | chr8_3:54844777-54844796 | Msa1296090:CDS | 50.0% | |
| TTGTGGGGAGATTGCTGAAG+GGG | + | chr8_3:54844779-54844798 | Msa1296090:CDS | 50.0% | |
| ATTGCTGAAGGGGAGGATGA+AGG | + | chr8_3:54844789-54844808 | Msa1296090:CDS | 50.0% | |
| TTGCTGAAGGGGAGGATGAA+GGG | + | chr8_3:54844790-54844809 | Msa1296090:CDS | 50.0% | |
| TGATCTTGATACCAAGCCGG+AGG | + | chr8_3:54844860-54844879 | Msa1296090:CDS | 50.0% | |
| ATCCACCATTCAAGCTCCTC+CGG | - | chr8_3:54844879-54844898 | None:intergenic | 50.0% | |
| TCGCAAGGCTTTGCGCTATT+TGG | + | chr8_3:54845321-54845340 | Msa1296090:CDS | 50.0% | |
| GACATGTGTTGGGAGAAGGA+TGG | + | chr8_3:54845343-54845362 | Msa1296090:CDS | 50.0% | |
| !! | GAGAAGGATGGTGTTGACCA+AGG | + | chr8_3:54845355-54845374 | Msa1296090:CDS | 50.0% |
| !! | AGGATGGTGTTGACCAAGGT+CGG | + | chr8_3:54845359-54845378 | Msa1296090:intron | 50.0% |
| ! | TGTCCTGTGCCTGTTTTCTC+CGG | + | chr8_3:54845940-54845959 | Msa1296090:intron | 50.0% |
| GGCCAAACTAACAAGGTTGG+TGG | + | chr8_3:54846036-54846055 | Msa1296090:intron | 50.0% | |
| CCCCACCAACCTTGTTAGTT+TGG | - | chr8_3:54846041-54846060 | None:intergenic | 50.0% | |
| ! | CTCACTGCCCTTTTCTGAGT+AGG | + | chr8_3:54846098-54846117 | Msa1296090:intron | 50.0% |
| TCGGACTTTGCAATGCACGA+TGG | + | chr8_3:54846307-54846326 | Msa1296090:CDS | 50.0% | |
| CTTATAACACTGGGGTCCTG+AGG | + | chr8_3:54847202-54847221 | Msa1296090:intron | 50.0% | |
| ! | CTTTGGCTTACCAGGGTTGA+AGG | + | chr8_3:54847304-54847323 | Msa1296090:intron | 50.0% |
| ACCTTGCTCTGTTCTTCAGG+AGG | + | chr8_3:54847702-54847721 | Msa1296090:intron | 50.0% | |
| CCTTGCTCTGTTCTTCAGGA+GGG | + | chr8_3:54847703-54847722 | Msa1296090:intron | 50.0% | |
| GTACGCAATTGCCAGGAAGA+AGG | + | chr8_3:54847737-54847756 | Msa1296090:CDS | 50.0% | |
| GGATATGGTGTATGTGGCGA+TGG | + | chr8_3:54847918-54847937 | Msa1296090:three_prime_UTR | 50.0% | |
| !!! | GGCGGTTTTGGGAACGACAT+CGG | - | chr8_3:54844352-54844371 | None:intergenic | 55.0% |
| TTTCGCCGGTGCAGAGAGAT+CGG | - | chr8_3:54844383-54844402 | None:intergenic | 55.0% | |
| ! | TCTCTCTGCACCGGCGAAAA+AGG | + | chr8_3:54844384-54844403 | Msa1296090:CDS | 55.0% |
| ! | TGCACCGGCGAAAAAGGCAT+CGG | + | chr8_3:54844390-54844409 | Msa1296090:CDS | 55.0% |
| !! | TGGACCGATGCCTTTTTCGC+CGG | - | chr8_3:54844397-54844416 | None:intergenic | 55.0% |
| TGAAGCCTTTGACGACACGG+TGG | - | chr8_3:54844458-54844477 | None:intergenic | 55.0% | |
| GTTTGGACCGGTATTCGCCA+TGG | - | chr8_3:54844595-54844614 | None:intergenic | 55.0% | |
| TCTGTTGAGCTTGGTCCGGT+TGG | + | chr8_3:54844717-54844736 | Msa1296090:CDS | 55.0% | |
| CTGTTGAGCTTGGTCCGGTT+GGG | + | chr8_3:54844718-54844737 | Msa1296090:CDS | 55.0% | |
| TGTTGAGCTTGGTCCGGTTG+GGG | + | chr8_3:54844719-54844738 | Msa1296090:CDS | 55.0% | |
| TGCTGAAGGGGAGGATGAAG+GGG | + | chr8_3:54844791-54844810 | Msa1296090:CDS | 55.0% | |
| TTCACAAGGTGGTAGGCCAC+CGG | - | chr8_3:54845962-54845981 | None:intergenic | 55.0% | |
| AGCTCTGTTTCGCAAAGGCC+AGG | + | chr8_3:54846342-54846361 | Msa1296090:CDS | 55.0% | |
| CTGTTTCGCAAAGGCCAGGT+TGG | + | chr8_3:54846346-54846365 | Msa1296090:intron | 55.0% | |
| TCTTACAGAACCCCCAGACC+AGG | + | chr8_3:54846887-54846906 | Msa1296090:intron | 55.0% | |
| CTTACAGAACCCCCAGACCA+GGG | + | chr8_3:54846888-54846907 | Msa1296090:intron | 55.0% | |
| ACTCAACAACAGCCTCCCTC+AGG | - | chr8_3:54847221-54847240 | None:intergenic | 55.0% | |
| CCCTCCTGAAGAACAGAGCA+AGG | - | chr8_3:54847706-54847725 | None:intergenic | 55.0% | |
| TGGAGAGGGACGTTGGTGTG+TGG | - | chr8_3:54844417-54844436 | None:intergenic | 60.0% | |
| ACCGGCGGCGAGTCAATCTA+CGG | + | chr8_3:54844513-54844532 | Msa1296090:CDS | 60.0% | |
| !! | ACCGTAGATTGACTCGCCGC+CGG | - | chr8_3:54844517-54844536 | None:intergenic | 60.0% |
| ACGAGGACGCCGCATTTGGA+TGG | + | chr8_3:54844645-54844664 | Msa1296090:CDS | 60.0% | |
| CGAGGACGCCGCATTTGGAT+GGG | + | chr8_3:54844646-54844665 | Msa1296090:CDS | 60.0% | |
| GGTCGATCGTTCTCCCCAAC+CGG | - | chr8_3:54844735-54844754 | None:intergenic | 60.0% | |
| GGTTGGGGAGAACGATCGAC+CGG | + | chr8_3:54844734-54844753 | Msa1296090:CDS | 60.0% | |
| TGGGGAGATTGCTGAAGGGG+AGG | + | chr8_3:54844782-54844801 | Msa1296090:CDS | 60.0% | |
| CCATTCAAGCTCCTCCGGCT+TGG | - | chr8_3:54844874-54844893 | None:intergenic | 60.0% | |
| CCAAGCCGGAGGAGCTTGAA+TGG | + | chr8_3:54844871-54844890 | Msa1296090:CDS | 60.0% | |
| AGCCGGAGGAGCTTGAATGG+TGG | + | chr8_3:54844874-54844893 | Msa1296090:CDS | 60.0% | |
| CCACCGGAGAAAACAGGCAC+AGG | - | chr8_3:54845946-54845965 | None:intergenic | 60.0% | |
| ! | CCTGTGCCTGTTTTCTCCGG+TGG | + | chr8_3:54845943-54845962 | Msa1296090:intron | 60.0% |
| GGTAGGCCACCGGAGAAAAC+AGG | - | chr8_3:54845952-54845971 | None:intergenic | 60.0% | |
| CAATGACCTGGATGCCGCTC+TGG | + | chr8_3:54847043-54847062 | Msa1296090:CDS | 60.0% | |
| AGCTATCCAGAGCGGCATCC+AGG | - | chr8_3:54847052-54847071 | None:intergenic | 60.0% | |
| TAACACTGGGGTCCTGAGGG+AGG | + | chr8_3:54847206-54847225 | Msa1296090:intron | 60.0% | |
| !! | AGCATCGGCGGCGAACTCGA+GGG | + | chr8_3:54844303-54844322 | Msa1296090:CDS | 65.0% |
| AGGCGGAGATGTCACCGCCT+TGG | - | chr8_3:54844485-54844504 | None:intergenic | 65.0% | |
| GGTGACATCTCCGCCTCCGA+CGG | + | chr8_3:54844489-54844508 | Msa1296090:CDS | 65.0% | |
| ATCTCCGCCTCCGACGGAAC+CGG | + | chr8_3:54844495-54844514 | Msa1296090:CDS | 65.0% | |
| GACGACGAGGACGCCGCATT+TGG | + | chr8_3:54844641-54844660 | Msa1296090:CDS | 65.0% | |
| GGAGAACGATCGACCGGAGC+AGG | + | chr8_3:54844740-54844759 | Msa1296090:CDS | 65.0% | |
| !! | CAGCATCGGCGGCGAACTCG+AGG | + | chr8_3:54844302-54844321 | Msa1296090:CDS | 70.0% |
| !! | TGACTCGCCGCCGGTTCCGT+CGG | - | chr8_3:54844508-54844527 | None:intergenic | 70.0% |
| TCCGCCTCCGACGGAACCGG+CGG | + | chr8_3:54844498-54844517 | Msa1296090:CDS | 75.0% | |
| !!! | GCCGCCGGTTCCGTCGGAGG+CGG | - | chr8_3:54844502-54844521 | None:intergenic | 80.0% |
| !!! | CTCGCCGCCGGTTCCGTCGG+AGG | - | chr8_3:54844505-54844524 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 54844220 | 54848240 | 54844220 | ID=Msa1296090;Name=Msa1296090 |
| chr8_3 | mRNA | 54844220 | 54848240 | 54844220 | ID=Msa1296090-mRNA-1;Parent=Msa1296090;Name=Msa1296090-mRNA-1;_AED=0.03;_eAED=0.03;_QI=53|1|1|1|1|1|7|332|360 |
| chr8_3 | exon | 54844220 | 54844944 | 54844220 | ID=Msa1296090-mRNA-1:exon:15721;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54845289 | 54845376 | 54845289 | ID=Msa1296090-mRNA-1:exon:15722;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54845499 | 54845551 | 54845499 | ID=Msa1296090-mRNA-1:exon:15723;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54846262 | 54846363 | 54846262 | ID=Msa1296090-mRNA-1:exon:15724;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54847029 | 54847104 | 54847029 | ID=Msa1296090-mRNA-1:exon:15725;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54847721 | 54847758 | 54847721 | ID=Msa1296090-mRNA-1:exon:15726;Parent=Msa1296090-mRNA-1 |
| chr8_3 | exon | 54847855 | 54848240 | 54847855 | ID=Msa1296090-mRNA-1:exon:15727;Parent=Msa1296090-mRNA-1 |
| chr8_3 | five_prime_UTR | 54844220 | 54844272 | 54844220 | ID=Msa1296090-mRNA-1:five_prime_utr;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54844273 | 54844944 | 54844273 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54845289 | 54845376 | 54845289 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54845499 | 54845551 | 54845499 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54846262 | 54846363 | 54846262 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54847029 | 54847104 | 54847029 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54847721 | 54847758 | 54847721 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | CDS | 54847855 | 54847908 | 54847855 | ID=Msa1296090-mRNA-1:cds;Parent=Msa1296090-mRNA-1 |
| chr8_3 | three_prime_UTR | 54847909 | 54848240 | 54847909 | ID=Msa1296090-mRNA-1:three_prime_utr;Parent=Msa1296090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
