AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0745670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745670 MtrunA17_Chr3g0121851 99.363 471 3 0 1 471 1 471 0.0 974
Msa0745670 MtrunA17_Chr8g0378091 94.268 471 27 0 1 471 1 471 0.0 935
Msa0745670 MtrunA17_Chr2g0277581 64.440 464 160 1 4 462 128 591 0.0 645
Msa0745670 MtrunA17_Chr3g0115291 64.425 461 156 2 7 462 118 575 0.0 638
Msa0745670 MtrunA17_Chr5g0411661 58.369 466 187 4 9 469 53 516 0.0 555
Msa0745670 MtrunA17_Chr5g0428001 57.602 467 189 5 9 469 42 505 0.0 551
Msa0745670 MtrunA17_Chr2g0285171 59.607 458 165 6 12 461 87 532 0.0 544
Msa0745670 MtrunA17_Chr7g0268951 63.636 176 63 1 37 212 1 175 2.04e-73 229
Msa0745670 MtrunA17_Chr1g0186271 34.226 336 156 9 127 456 10 286 7.57e-50 172
Msa0745670 MtrunA17_Chr7g0268941 41.722 151 82 2 318 462 16 166 4.66e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745670 AT4G13930.1 90.658 471 44 0 1 471 1 471 0.0 902
Msa0745670 AT4G13890.1 78.541 466 100 0 1 466 1 466 0.0 794
Msa0745670 AT4G13890.2 79.540 391 80 0 1 391 1 391 0.0 672
Msa0745670 AT1G36370.1 63.305 466 166 1 4 464 130 595 0.0 635
Msa0745670 AT1G22020.2 62.284 464 170 1 4 462 134 597 0.0 624
Msa0745670 AT1G22020.1 62.284 464 170 1 4 462 134 597 0.0 624
Msa0745670 AT4G32520.2 59.785 465 168 6 3 461 77 528 0.0 572
Msa0745670 AT4G32520.1 59.785 465 168 6 3 461 77 528 0.0 572
Msa0745670 AT4G37930.1 57.479 468 192 4 9 471 52 517 0.0 561
Msa0745670 AT5G26780.1 56.410 468 197 4 9 471 52 517 0.0 545
Msa0745670 AT5G26780.4 56.410 468 197 4 9 471 52 517 0.0 545
Msa0745670 AT5G26780.2 54.545 484 197 5 9 471 52 533 0.0 535
Msa0745670 AT5G26780.3 54.545 484 197 5 9 471 52 533 0.0 535

Find 185 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATTAGGTCGTGGATTTC+TGG 0.053246 5_1:+67472750 Msa0745660:three_prime_UTR
GGGATATAATGCTCTTATTT+TGG 0.135532 5_1:-67470971 Msa0745670:three_prime_UTR
ACTTCTCAACATCAGCTTTA+AGG 0.149316 5_1:+67471098 Msa0745660:three_prime_UTR
CAACAACCCATAAGAGTTTA+AGG 0.154381 5_1:-67471993 Msa0745670:CDS
TAACCGATAAATACAGAATT+TGG 0.197215 5_1:+67470809 Msa0745660:three_prime_UTR
TGGGACCCCTTAAACTCTTA+TGG 0.221123 5_1:+67471986 Msa0745660:three_prime_UTR
TATCCTAGAGATTGGGATTA+TGG 0.237401 5_1:-67472225 Msa0745670:CDS
TTGCCAGGGTAGAGTCATTT+TGG 0.248530 5_1:+67470998 Msa0745660:three_prime_UTR
CTTTGAGAGTTTGCCGTATA+AGG 0.255272 5_1:-67472340 Msa0745670:CDS
CCGTCCATTTGATACGATAT+TGG 0.260283 5_1:+67470748 Msa0745660:three_prime_UTR
CGTCCATTTGATACGATATT+GGG 0.282950 5_1:+67470749 Msa0745660:three_prime_UTR
TCCATCTCGACGCCGCCACC+TGG 0.291241 5_1:-67472530 Msa0745670:CDS
GTGCCCCAGCTATGACTTCC+AGG 0.297783 5_1:-67471261 Msa0745670:CDS
GTGTTTCCCCATTCACTAAC+TGG 0.306705 5_1:+67472792 Msa0745660:three_prime_UTR
TTGAAACAGGCCACCACGCC+TGG 0.308348 5_1:-67471805 Msa0745670:CDS
TAGTGGGTTTAATCGCTAAT+TGG 0.309093 5_1:+67470847 Msa0745660:three_prime_UTR
CCATACTCTTGCAGGCAATA+AGG 0.320283 5_1:-67471559 Msa0745670:intron
CTATTAGGTCGTGGATTTCT+GGG 0.321184 5_1:+67472751 Msa0745660:three_prime_UTR
GGGACCCCTTAAACTCTTAT+GGG 0.322732 5_1:+67471987 Msa0745660:three_prime_UTR
TGTTGGTGAGGGCGCTTCCT+AGG 0.327933 5_1:+67472649 Msa0745660:three_prime_UTR
ACACCAAATTCTGTATTTAT+CGG 0.338653 5_1:-67470812 Msa0745670:three_prime_UTR
TCTTGCTGTTGCTTTGAAAC+AGG 0.352836 5_1:-67471818 Msa0745670:CDS
CTAGAGATTCAAAAGGAATA+TGG 0.360286 5_1:-67471175 Msa0745670:CDS
TTCTCAGGCTGACCCTTCTT+AGG 0.365357 5_1:+67471925 Msa0745660:three_prime_UTR
ACTCATGGTTACTATACTTC+CGG 0.367102 5_1:-67472393 Msa0745670:CDS
CGGGGTTTATTGATTATGAT+AGG 0.373858 5_1:-67472305 Msa0745670:CDS
TAGTGGCCTTGTTGCTGCTC+AGG 0.378762 5_1:-67472142 Msa0745670:intron
TGACCCTTCTTAGGTGGCTT+AGG 0.381473 5_1:+67471934 Msa0745660:three_prime_UTR
GGCCACCACGCCTGGGTTCA+AGG 0.389046 5_1:-67471797 Msa0745670:CDS
AGCTATGACTTCCAGGGGTC+TGG 0.390169 5_1:-67471254 Msa0745670:CDS
TCTGGGTCTACGGTTACTAA+TGG 0.398028 5_1:+67472768 Msa0745660:three_prime_UTR
TGTGATATGGCTCATATTAG+TGG 0.398072 5_1:-67472159 Msa0745670:CDS
TTCCGGTGGGAAGAAGATTT+CGG 0.399859 5_1:-67472376 Msa0745670:CDS
TGACTCTACCCTGGCAAGAT+GGG 0.405929 5_1:-67470992 Msa0745670:three_prime_UTR
CATTATATCCCCATCTTGCC+AGG 0.410134 5_1:+67470983 Msa0745660:three_prime_UTR
TGAAAATCATCTTGTCTTGT+GGG 0.412161 5_1:-67471689 Msa0745670:CDS
AGACCAAAGTTGATTATTTG+TGG 0.418304 5_1:-67472258 Msa0745670:CDS
CCATCTCGACGCCGCCACCT+GGG 0.419420 5_1:-67472529 Msa0745670:CDS
GCCGCCGTAGTAACGGTTAC+CGG 0.420593 5_1:+67472608 Msa0745660:three_prime_UTR
CATGCCTTCGGAATATTTGT+TGG 0.421243 5_1:+67472632 Msa0745660:three_prime_UTR
CCGTTCTCAATCCTCATGAT+AGG 0.429413 5_1:-67472452 Msa0745670:CDS
TGAGCTAAAGTACAAGGATT+AGG 0.432392 5_1:-67471038 Msa0745670:exon
TAGGTGGCTTAGGTCCCTTC+CGG 0.432847 5_1:+67471944 Msa0745660:three_prime_UTR
TGCATTGGCCTTAACTTGCT+TGG 0.435848 5_1:+67471768 Msa0745660:three_prime_UTR
TTGTGGGATCTCCGCCCTCT+TGG 0.438255 5_1:-67471673 Msa0745670:CDS
GGGACCTAAGCCACCTAAGA+AGG 0.441492 5_1:-67471938 Msa0745670:CDS
CTCCGCCCTCTTGGCTTGAC+CGG 0.443426 5_1:-67471664 Msa0745670:intron
GAAGTGCTTATCCTAGAGAT+TGG 0.443642 5_1:-67472233 Msa0745670:CDS
TTCGGAATATTTGTTGGTGA+GGG 0.446564 5_1:+67472638 Msa0745660:three_prime_UTR
AAATATTCCGAAGGCATGCC+CGG 0.451502 5_1:-67472627 Msa0745670:CDS
CCTTGGCACCTGGAGGAGTC+AGG 0.451905 5_1:-67471470 Msa0745670:CDS
GTTCGATTCCGCGGCATTGA+CGG 0.453190 5_1:+67472715 Msa0745660:three_prime_UTR
TCAGCATCATTTGATATGCC+TGG 0.454342 5_1:-67471073 Msa0745670:CDS
TAGGTTGGAAGAGAAAGCTT+TGG 0.454657 5_1:-67472286 Msa0745670:CDS
AACAACCCATAAGAGTTTAA+GGG 0.454960 5_1:-67471992 Msa0745670:CDS
CAATCCTCATGATAGGATCA+TGG 0.456642 5_1:-67472445 Msa0745670:CDS
CAATGGATCCAGTTAGTGAA+TGG 0.456981 5_1:-67472800 Msa0745670:CDS
GGCCTATGCCAAGCAAGTTA+AGG 0.461054 5_1:-67471776 Msa0745670:CDS
TTGGCATAGGCCTTGAACCC+AGG 0.465093 5_1:+67471787 Msa0745660:three_prime_UTR
GTTGGTGAGGGCGCTTCCTA+GGG 0.465658 5_1:+67472650 Msa0745660:three_prime_UTR
CTGAAAATCATCTTGTCTTG+TGG 0.469345 5_1:-67471690 Msa0745670:CDS
GGTGTGTAACGAAAATTTAG+TGG 0.469869 5_1:+67470830 Msa0745660:three_prime_UTR
CCACCACAAATAATCAACTT+TGG 0.471153 5_1:+67472255 Msa0745660:three_prime_UTR
GTCCTTCTCAACCAGACCCC+TGG 0.471209 5_1:+67471243 Msa0745660:three_prime_UTR
GGCGAAATTCGCCGGTGAGC+CGG 0.471948 5_1:+67472485 Msa0745660:three_prime_UTR
ATGACTCTACCCTGGCAAGA+TGG 0.474178 5_1:-67470993 Msa0745670:three_prime_UTR
TTACCAATCCTGACTCCTCC+AGG 0.477314 5_1:+67471462 Msa0745660:intron
GATAGTAGTGCCTTGGCACC+TGG 0.479436 5_1:-67471480 Msa0745670:CDS
AGACCCCTGGAAGTCATAGC+TGG 0.480209 5_1:+67471256 Msa0745660:three_prime_UTR
GTCGTGGATTTCTGGGTCTA+CGG 0.480956 5_1:+67472758 Msa0745660:three_prime_UTR
ACGGTTACCGGGCATGCCTT+CGG 0.482851 5_1:+67472620 Msa0745660:three_prime_UTR
CAACAGCAAGAGCACCAATC+TGG 0.482879 5_1:+67471830 Msa0745660:three_prime_UTR
GTTTATTGATTATGATAGGT+TGG 0.485055 5_1:-67472301 Msa0745670:CDS
AATGGATCCAGTTAGTGAAT+GGG 0.485642 5_1:-67472799 Msa0745670:CDS
CCCAGGTGGCGGCGTCGAGA+TGG 0.488002 5_1:+67472529 Msa0745660:three_prime_UTR
AAGTGCTTATCCTAGAGATT+GGG 0.489191 5_1:-67472232 Msa0745670:CDS
ACAATGTCACAGAACTCAAA+AGG 0.494655 5_1:+67472021 Msa0745660:three_prime_UTR
AGTTTAAGGGGTCCCAGGGC+TGG 0.495042 5_1:-67471979 Msa0745670:CDS
AGCTCAGACACTAGGAATCC+AGG 0.498066 5_1:+67471055 Msa0745660:three_prime_UTR
TTCGCCGGTGAGCCGGAGTA+AGG 0.500155 5_1:+67472492 Msa0745660:three_prime_UTR
GTGGTCGAATTCACCTTATA+CGG 0.500256 5_1:+67472327 Msa0745660:three_prime_UTR
AACGTTGACACCCCAGGTGG+CGG 0.500618 5_1:+67472518 Msa0745660:three_prime_UTR
AAATCATAAACAGCATTCTC+AGG 0.503953 5_1:+67471910 Msa0745660:three_prime_UTR
ATAAGAGTTTAAGGGGTCCC+AGG 0.506409 5_1:-67471984 Msa0745670:CDS
ATTTCCAAGTGCAACTGCAT+TGG 0.507929 5_1:+67471753 Msa0745660:three_prime_UTR
GGCCTTAACTTGCTTGGCAT+AGG 0.510929 5_1:+67471774 Msa0745660:three_prime_UTR
GTGTAAGCGGCGAAATTCGC+CGG 0.512076 5_1:+67472477 Msa0745660:three_prime_UTR
CTAAAGTACAAGGATTAGGC+TGG 0.514314 5_1:-67471034 Msa0745670:exon
AAGGCCAATGCAGTTGCACT+TGG 0.514829 5_1:-67471757 Msa0745670:CDS
TTCCAGGGGTCTGGTTGAGA+AGG 0.515430 5_1:-67471245 Msa0745670:CDS
ATGGGACTGGATCTACCTTC+TGG 0.519276 5_1:-67472426 Msa0745670:CDS
CTTCGGAATATTTGTTGGTG+AGG 0.520695 5_1:+67472637 Msa0745660:three_prime_UTR
GTGTGTAACGAAAATTTAGT+GGG 0.521329 5_1:+67470831 Msa0745660:three_prime_UTR
CTTCCATAATCCCAATCTCT+AGG 0.521993 5_1:+67472222 Msa0745660:three_prime_UTR
CTAGAGATTGGGATTATGGA+AGG 0.522411 5_1:-67472221 Msa0745670:CDS
TGGAAATTACTTGATGAGCA+AGG 0.526987 5_1:-67471737 Msa0745670:CDS
CTTCATCGATTCATTCACAA+TGG 0.529216 5_1:-67472817 Msa0745670:exon
TCTCACACTAGAGATTCAAA+AGG 0.529312 5_1:-67471182 Msa0745670:CDS
TGCCCCAGCTATGACTTCCA+GGG 0.531621 5_1:-67471260 Msa0745670:CDS
TCAGGCTGACCCTTCTTAGG+TGG 0.531885 5_1:+67471928 Msa0745660:three_prime_UTR
TCTGGTGGACATTTGACTCA+TGG 0.533259 5_1:-67472408 Msa0745670:CDS
GACCCCTGGAAGTCATAGCT+GGG 0.538130 5_1:+67471257 Msa0745660:three_prime_UTR
TCATGATAGGATCATGGGAC+TGG 0.541625 5_1:-67472439 Msa0745670:CDS
GGAAATTACTTGATGAGCAA+GGG 0.546759 5_1:-67471736 Msa0745670:CDS
GGTCCTCACAACCACCAGAT+TGG 0.554648 5_1:-67471844 Msa0745670:CDS
CCTGACTCCTCCAGGTGCCA+AGG 0.555521 5_1:+67471470 Msa0745660:three_prime_UTR
ATTCGTTGCCGCCGTAGTAA+CGG 0.556361 5_1:+67472601 Msa0745660:three_prime_UTR
GGTGGCGGCGTCGAGATGGA+AGG 0.558501 5_1:+67472533 Msa0745660:three_prime_UTR
GTGAGGACCACCCTGAAGGG+AGG 0.560471 5_1:+67471858 Msa0745660:three_prime_UTR
GTAGAAGATCATACCAGCCC+TGG 0.560560 5_1:+67471966 Msa0745660:three_prime_UTR
AATCCTCATGATAGGATCAT+GGG 0.561616 5_1:-67472444 Msa0745670:CDS
CCGCCGTAGTAACGGTTACC+GGG 0.564640 5_1:+67472609 Msa0745660:three_prime_UTR
GCACCTGGAGGAGTCAGGAT+TGG 0.566548 5_1:-67471465 Msa0745670:intron
CCAAAGTTGATTATTTGTGG+TGG 0.566763 5_1:-67472255 Msa0745670:CDS
TGAAACAGGCCACCACGCCT+GGG 0.567620 5_1:-67471804 Msa0745670:CDS
CATCTCGACGCCGCCACCTG+GGG 0.569527 5_1:-67472528 Msa0745670:CDS
TGTACTTTAGCTCAGACACT+AGG 0.569790 5_1:+67471047 Msa0745660:three_prime_UTR
AGCCGAAATCTTCTTCCCAC+CGG 0.572971 5_1:+67472374 Msa0745660:three_prime_UTR
TGAGGACCACCCTGAAGGGA+GGG 0.581330 5_1:+67471859 Msa0745660:three_prime_UTR
GGCTTCAATGACTGCGAAGG+AGG 0.581885 5_1:+67472671 Msa0745660:three_prime_UTR
GGCCTTGAACCCAGGCGTGG+TGG 0.582420 5_1:+67471795 Msa0745660:three_prime_UTR
GGGCTGGTATGATCTTCTAC+CGG 0.582673 5_1:-67471963 Msa0745670:CDS
AGTGTCTGAGCTAAAGTACA+AGG 0.584233 5_1:-67471044 Msa0745670:CDS
TTCGCAGTCATTGAAGCCCT+AGG 0.584856 5_1:-67472666 Msa0745670:CDS
TACTCTTGCAGGCAATAAGG+TGG 0.588895 5_1:-67471556 Msa0745670:intron
AGGCGGTGAGAGCGCGTGAG+CGG 0.589839 5_1:+67472553 Msa0745660:three_prime_UTR
AAGGGATACAGTCTTGTCAC+TGG 0.593253 5_1:-67471718 Msa0745670:CDS
GACTCTACCCTGGCAAGATG+GGG 0.594221 5_1:-67470991 Msa0745670:three_prime_UTR
TGGTATGATCTTCTACCGGA+AGG 0.596236 5_1:-67471959 Msa0745670:CDS
GAGGACCACCCTGAAGGGAG+GGG 0.597307 5_1:+67471860 Msa0745660:three_prime_UTR
TATAAGGTGAATTCGACCAC+GGG 0.598190 5_1:-67472324 Msa0745670:CDS
ATTGAGAACGGCGGTGTAAG+CGG 0.599009 5_1:+67472464 Msa0745660:three_prime_UTR
GAATGAATCGATGAAGAATG+TGG 0.600571 5_1:+67472824 Msa0745660:three_prime_UTR
TGAGAGTTACTGCACGGTGA+AGG 0.602137 5_1:+67471200 Msa0745660:three_prime_UTR
GGACTGGATCTACCTTCTGG+TGG 0.603220 5_1:-67472423 Msa0745670:CDS
TAAGAGTTTAAGGGGTCCCA+GGG 0.604324 5_1:-67471983 Msa0745670:CDS
TAGAAGATCATACCAGCCCT+GGG 0.606806 5_1:+67471967 Msa0745660:three_prime_UTR
CCAATATCGTATCAAATGGA+CGG 0.607038 5_1:-67470748 Msa0745670:three_prime_UTR
GCACCAATCTGGTGGTTGTG+AGG 0.609752 5_1:+67471841 Msa0745660:three_prime_UTR
GTTGTGAGGACCACCCTGAA+GGG 0.610275 5_1:+67471855 Msa0745660:three_prime_UTR
TAAAGTACAAGGATTAGGCT+GGG 0.613683 5_1:-67471033 Msa0745670:exon
GTCAACGTTCAACCTTACTC+CGG 0.614352 5_1:-67472504 Msa0745670:CDS
TAGGGCTTCAATGACTGCGA+AGG 0.618421 5_1:+67472668 Msa0745660:three_prime_UTR
GTCCATTTGATACGATATTG+GGG 0.619248 5_1:+67470750 Msa0745660:three_prime_UTR
GCCCCAGCTATGACTTCCAG+GGG 0.620989 5_1:-67471259 Msa0745670:CDS
ACAACCCATAAGAGTTTAAG+GGG 0.623565 5_1:-67471991 Msa0745670:CDS
ATGGATCCAGTTAGTGAATG+GGG 0.624625 5_1:-67472798 Msa0745670:CDS
GTTTACCGGTCAAGCCAAGA+GGG 0.625923 5_1:+67471659 Msa0745660:intron
GGACCTAAGCCACCTAAGAA+GGG 0.629365 5_1:-67471937 Msa0745670:CDS
CATGGTTACTATACTTCCGG+TGG 0.629951 5_1:-67472390 Msa0745670:CDS
GGTATGATCTTCTACCGGAA+GGG 0.631495 5_1:-67471958 Msa0745670:CDS
ACATAACAACAATAAACTCA+AGG 0.634786 5_1:+67470776 Msa0745660:three_prime_UTR
ATAGGCCTTGAACCCAGGCG+TGG 0.634867 5_1:+67471792 Msa0745660:three_prime_UTR
TGTTCACAGTAATGTTACAG+AGG 0.637542 5_1:+67471520 Msa0745660:three_prime_UTR
AGAAATTCAATATAACAGCA+AGG 0.640059 5_1:+67470881 Msa0745660:three_prime_UTR
TCAACCTTACTCCGGCTCAC+CGG 0.640516 5_1:-67472496 Msa0745670:CDS
TGAGTCAAATGTCCACCAGA+AGG 0.641882 5_1:+67472411 Msa0745660:three_prime_UTR
AGGTTGAACGTTGACACCCC+AGG 0.642017 5_1:+67472512 Msa0745660:three_prime_UTR
GGTTGTGAGGACCACCCTGA+AGG 0.642881 5_1:+67471854 Msa0745660:three_prime_UTR
ATGCCCGGTAACCGTTACTA+CGG 0.643010 5_1:-67472612 Msa0745670:CDS
GGCGGCGTCGAGATGGAAGG+CGG 0.644858 5_1:+67472536 Msa0745660:three_prime_UTR
CAGCAAGAGCACCAATCTGG+TGG 0.647474 5_1:+67471833 Msa0745660:three_prime_UTR
CCCGGTAACCGTTACTACGG+CGG 0.648521 5_1:-67472609 Msa0745670:CDS
CTCACCAACAAATATTCCGA+AGG 0.651545 5_1:-67472636 Msa0745670:CDS
CTTCCAAAATGACTCTACCC+TGG 0.655628 5_1:-67471001 Msa0745670:three_prime_UTR
AGGCAATGAGTTCGATTCCG+CGG 0.655674 5_1:+67472706 Msa0745660:three_prime_UTR
CCTATCATGAGGATTGAGAA+CGG 0.656550 5_1:+67472452 Msa0745660:three_prime_UTR
TACCGGTCAAGCCAAGAGGG+CGG 0.661729 5_1:+67471662 Msa0745660:intron
TCCATTTGATACGATATTGG+GGG 0.667002 5_1:+67470751 Msa0745660:three_prime_UTR
AGTTTACCGGTCAAGCCAAG+AGG 0.668683 5_1:+67471658 Msa0745660:intron
CAAAGAAAAGAGCACGACAG+TGG 0.676462 5_1:+67472850 Msa0745660:three_prime_UTR
ATTATATCCCCATCTTGCCA+GGG 0.676773 5_1:+67470984 Msa0745660:three_prime_UTR
ATAATACCTGAGCAGCAACA+AGG 0.680074 5_1:+67472136 Msa0745660:intron
CTAGTGTGAGAGTTACTGCA+CGG 0.681721 5_1:+67471194 Msa0745660:three_prime_UTR
AGTCCCATGATCCTATCATG+AGG 0.682957 5_1:+67472441 Msa0745660:three_prime_UTR
ACCCCTGGAAGTCATAGCTG+GGG 0.683408 5_1:+67471258 Msa0745660:three_prime_UTR
ATGGTTACTATACTTCCGGT+GGG 0.689475 5_1:-67472389 Msa0745670:CDS
AGTAGTGCCTTGGCACCTGG+AGG 0.689991 5_1:-67471477 Msa0745670:CDS
AGACAAGTTGCTGATAAGTG+TGG 0.694051 5_1:-67472195 Msa0745670:CDS
GTATAAGGTGAATTCGACCA+CGG 0.696614 5_1:-67472325 Msa0745670:CDS
ATCATAATCAATAAACCCCG+TGG 0.703727 5_1:+67472308 Msa0745660:three_prime_UTR
GGATACAGTCTTGTCACTGG+AGG 0.719260 5_1:-67471715 Msa0745670:CDS
ATAAGGTGAATTCGACCACG+GGG 0.760924 5_1:-67472323 Msa0745670:CDS
TTGAACGTTGACACCCCAGG+TGG 0.772161 5_1:+67472515 Msa0745660:three_prime_UTR
ATCATGAGGATTGAGAACGG+CGG 0.786132 5_1:+67472455 Msa0745660:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTAAAGCAAAAACAA+TGG + chr5_1:67472704-67472723 Msa0745660:three_prime_UTR 15.0%
!!! TAAATTTAAAGCAAAAACAA+TGG + chr5_1:67472704-67472723 Msa0745660:three_prime_UTR 15.0%
!! GTTTATTGATTATGATAGGT+TGG - chr5_1:67471330-67471349 Msa0745670:intron 25.0%
!! TTACGAGTTTATTAGTTTAC+CGG + chr5_1:67471989-67472008 Msa0745660:three_prime_UTR 25.0%
! ATCAAAACTTTGCATAAACA+AGG + chr5_1:67472285-67472304 Msa0745660:three_prime_UTR 25.0%
! AGAAATTCAATATAACAGCA+AGG + chr5_1:67472753-67472772 Msa0745660:three_prime_UTR 25.0%
! ACACCAAATTCTGTATTTAT+CGG - chr5_1:67472819-67472838 Msa0745670:exon 25.0%
! TAACCGATAAATACAGAATT+TGG + chr5_1:67472825-67472844 Msa0745660:three_prime_UTR 25.0%
! ACATAACAACAATAAACTCA+AGG + chr5_1:67472858-67472877 Msa0745660:three_prime_UTR 25.0%
!! GTTTATTGATTATGATAGGT+TGG - chr5_1:67471330-67471349 Msa0745670:intron 25.0%
!! TTACGAGTTTATTAGTTTAC+CGG + chr5_1:67471989-67472008 Msa0745660:three_prime_UTR 25.0%
! ATCAAAACTTTGCATAAACA+AGG + chr5_1:67472285-67472304 Msa0745660:three_prime_UTR 25.0%
! AGAAATTCAATATAACAGCA+AGG + chr5_1:67472753-67472772 Msa0745660:three_prime_UTR 25.0%
! ACACCAAATTCTGTATTTAT+CGG - chr5_1:67472819-67472838 Msa0745670:exon 25.0%
! TAACCGATAAATACAGAATT+TGG + chr5_1:67472825-67472844 Msa0745660:three_prime_UTR 25.0%
! ACATAACAACAATAAACTCA+AGG + chr5_1:67472858-67472877 Msa0745660:three_prime_UTR 25.0%
! TTTCTTTTTCTATTAGGTCG+TGG + chr5_1:67470892-67470911 Msa0745660:three_prime_UTR 30.0%
! GGCGTTTTTCTTTTTCTATT+AGG + chr5_1:67470898-67470917 Msa0745660:three_prime_UTR 30.0%
! AGACCAAAGTTGATTATTTG+TGG - chr5_1:67471373-67471392 Msa0745670:intron 30.0%
AACAACCCATAAGAGTTTAA+GGG - chr5_1:67471639-67471658 Msa0745670:intron 30.0%
AAATCATAAACAGCATTCTC+AGG + chr5_1:67471724-67471743 Msa0745660:three_prime_UTR 30.0%
TGAAAATCATCTTGTCTTGT+GGG - chr5_1:67471942-67471961 Msa0745670:CDS 30.0%
AAAAAATGTTGCAATGTCGT+TGG - chr5_1:67472007-67472026 Msa0745670:CDS 30.0%
AAAAATGTTGCAATGTCGTT+GGG - chr5_1:67472008-67472027 Msa0745670:CDS 30.0%
TTGGGTTTGATTGTTAAAGT+TGG - chr5_1:67472026-67472045 Msa0745670:CDS 30.0%
TGGGTTTGATTGTTAAAGTT+GGG - chr5_1:67472027-67472046 Msa0745670:CDS 30.0%
TAAACAAGGACTTCCAATAT+TGG + chr5_1:67472271-67472290 Msa0745660:three_prime_UTR 30.0%
CTAGAGATTCAAAAGGAATA+TGG - chr5_1:67472456-67472475 Msa0745670:CDS 30.0%
! GGAATATGGTAAACTTTTGA+AGG - chr5_1:67472470-67472489 Msa0745670:CDS 30.0%
!! ACTTTTGAAGGATTTCAACA+AGG - chr5_1:67472482-67472501 Msa0745670:CDS 30.0%
!! CTTTTGAAGGATTTCAACAA+GGG - chr5_1:67472483-67472502 Msa0745670:CDS 30.0%
!! GGGATATAATGCTCTTATTT+TGG - chr5_1:67472660-67472679 Msa0745670:CDS 30.0%
!!! TCTTATTTTGGATGTCACAT+AGG - chr5_1:67472672-67472691 Msa0745670:CDS 30.0%
GTGTGTAACGAAAATTTAGT+GGG + chr5_1:67472803-67472822 Msa0745660:three_prime_UTR 30.0%
! TTTCTTTTTCTATTAGGTCG+TGG + chr5_1:67470892-67470911 Msa0745660:three_prime_UTR 30.0%
! GGCGTTTTTCTTTTTCTATT+AGG + chr5_1:67470898-67470917 Msa0745660:three_prime_UTR 30.0%
! AGACCAAAGTTGATTATTTG+TGG - chr5_1:67471373-67471392 Msa0745670:intron 30.0%
AACAACCCATAAGAGTTTAA+GGG - chr5_1:67471639-67471658 Msa0745670:intron 30.0%
AAATCATAAACAGCATTCTC+AGG + chr5_1:67471724-67471743 Msa0745660:three_prime_UTR 30.0%
TGAAAATCATCTTGTCTTGT+GGG - chr5_1:67471942-67471961 Msa0745670:CDS 30.0%
AAAAAATGTTGCAATGTCGT+TGG - chr5_1:67472007-67472026 Msa0745670:CDS 30.0%
AAAAATGTTGCAATGTCGTT+GGG - chr5_1:67472008-67472027 Msa0745670:CDS 30.0%
TTGGGTTTGATTGTTAAAGT+TGG - chr5_1:67472026-67472045 Msa0745670:CDS 30.0%
TGGGTTTGATTGTTAAAGTT+GGG - chr5_1:67472027-67472046 Msa0745670:CDS 30.0%
TAAACAAGGACTTCCAATAT+TGG + chr5_1:67472271-67472290 Msa0745660:three_prime_UTR 30.0%
CTAGAGATTCAAAAGGAATA+TGG - chr5_1:67472456-67472475 Msa0745670:CDS 30.0%
! GGAATATGGTAAACTTTTGA+AGG - chr5_1:67472470-67472489 Msa0745670:CDS 30.0%
!! ACTTTTGAAGGATTTCAACA+AGG - chr5_1:67472482-67472501 Msa0745670:CDS 30.0%
!! CTTTTGAAGGATTTCAACAA+GGG - chr5_1:67472483-67472502 Msa0745670:CDS 30.0%
!! GGGATATAATGCTCTTATTT+TGG - chr5_1:67472660-67472679 Msa0745670:CDS 30.0%
!!! TCTTATTTTGGATGTCACAT+AGG - chr5_1:67472672-67472691 Msa0745670:CDS 30.0%
GTGTGTAACGAAAATTTAGT+GGG + chr5_1:67472803-67472822 Msa0745660:three_prime_UTR 30.0%
GAATGAATCGATGAAGAATG+TGG + chr5_1:67470810-67470829 Msa0745660:three_prime_UTR 35.0%
!! CTTCATCGATTCATTCACAA+TGG - chr5_1:67470814-67470833 Msa0745670:three_prime_UTR 35.0%
AATGGATCCAGTTAGTGAAT+GGG - chr5_1:67470832-67470851 Msa0745670:three_prime_UTR 35.0%
! TTCGGAATATTTGTTGGTGA+GGG + chr5_1:67470996-67471015 Msa0745660:three_prime_UTR 35.0%
AATCCTCATGATAGGATCAT+GGG - chr5_1:67471187-67471206 Msa0745670:CDS 35.0%
ACTCATGGTTACTATACTTC+CGG - chr5_1:67471238-67471257 Msa0745670:CDS 35.0%
ATCATAATCAATAAACCCCG+TGG + chr5_1:67471326-67471345 Msa0745660:intron 35.0%
! CGGGGTTTATTGATTATGAT+AGG - chr5_1:67471326-67471345 Msa0745670:intron 35.0%
CCACCACAAATAATCAACTT+TGG + chr5_1:67471379-67471398 Msa0745660:intron 35.0%
! CCAAAGTTGATTATTTGTGG+TGG - chr5_1:67471376-67471395 Msa0745670:intron 35.0%
AAGTGCTTATCCTAGAGATT+GGG - chr5_1:67471399-67471418 Msa0745670:intron 35.0%
TATCCTAGAGATTGGGATTA+TGG - chr5_1:67471406-67471425 Msa0745670:intron 35.0%
! TGCTCTTTTGCTTTGTGATA+TGG - chr5_1:67471459-67471478 Msa0745670:intron 35.0%
TGTGATATGGCTCATATTAG+TGG - chr5_1:67471472-67471491 Msa0745670:CDS 35.0%
! AGTTACGTTTTTGTGGATAC+AGG - chr5_1:67471576-67471595 Msa0745670:intron 35.0%
ACAATGTCACAGAACTCAAA+AGG + chr5_1:67471613-67471632 Msa0745660:intron 35.0%
CAACAACCCATAAGAGTTTA+AGG - chr5_1:67471638-67471657 Msa0745670:intron 35.0%
ACAACCCATAAGAGTTTAAG+GGG - chr5_1:67471640-67471659 Msa0745670:intron 35.0%
TGGAAATTACTTGATGAGCA+AGG - chr5_1:67471894-67471913 Msa0745670:CDS 35.0%
GGAAATTACTTGATGAGCAA+GGG - chr5_1:67471895-67471914 Msa0745670:CDS 35.0%
CTGAAAATCATCTTGTCTTG+TGG - chr5_1:67471941-67471960 Msa0745670:CDS 35.0%
! TGTATTTTCCATACTCTTGC+AGG - chr5_1:67472064-67472083 Msa0745670:intron 35.0%
TGTTCACAGTAATGTTACAG+AGG + chr5_1:67472114-67472133 Msa0745660:intron 35.0%
!!! GTGAACAAGAATGCTGTTTT+TGG - chr5_1:67472127-67472146 Msa0745670:intron 35.0%
TCTCACACTAGAGATTCAAA+AGG - chr5_1:67472449-67472468 Msa0745670:CDS 35.0%
ACTTCTCAACATCAGCTTTA+AGG + chr5_1:67472536-67472555 Msa0745660:three_prime_UTR 35.0%
TGAGCTAAAGTACAAGGATT+AGG - chr5_1:67472593-67472612 Msa0745670:CDS 35.0%
TAAAGTACAAGGATTAGGCT+GGG - chr5_1:67472598-67472617 Msa0745670:CDS 35.0%
!! TAGTGGGTTTAATCGCTAAT+TGG + chr5_1:67472787-67472806 Msa0745660:three_prime_UTR 35.0%
GGTGTGTAACGAAAATTTAG+TGG + chr5_1:67472804-67472823 Msa0745660:three_prime_UTR 35.0%
TCCATTTGATACGATATTGG+GGG + chr5_1:67472883-67472902 Msa0745660:three_prime_UTR 35.0%
GTCCATTTGATACGATATTG+GGG + chr5_1:67472884-67472903 Msa0745660:three_prime_UTR 35.0%
CGTCCATTTGATACGATATT+GGG + chr5_1:67472885-67472904 Msa0745660:three_prime_UTR 35.0%
CCAATATCGTATCAAATGGA+CGG - chr5_1:67472883-67472902 Msa0745670:five_prime_UTR 35.0%
GAATGAATCGATGAAGAATG+TGG + chr5_1:67470810-67470829 Msa0745660:three_prime_UTR 35.0%
!! CTTCATCGATTCATTCACAA+TGG - chr5_1:67470814-67470833 Msa0745670:three_prime_UTR 35.0%
AATGGATCCAGTTAGTGAAT+GGG - chr5_1:67470832-67470851 Msa0745670:three_prime_UTR 35.0%
! TTCGGAATATTTGTTGGTGA+GGG + chr5_1:67470996-67471015 Msa0745660:three_prime_UTR 35.0%
AATCCTCATGATAGGATCAT+GGG - chr5_1:67471187-67471206 Msa0745670:CDS 35.0%
ACTCATGGTTACTATACTTC+CGG - chr5_1:67471238-67471257 Msa0745670:CDS 35.0%
ATCATAATCAATAAACCCCG+TGG + chr5_1:67471326-67471345 Msa0745660:intron 35.0%
! CGGGGTTTATTGATTATGAT+AGG - chr5_1:67471326-67471345 Msa0745670:intron 35.0%
CCACCACAAATAATCAACTT+TGG + chr5_1:67471379-67471398 Msa0745660:intron 35.0%
! CCAAAGTTGATTATTTGTGG+TGG - chr5_1:67471376-67471395 Msa0745670:intron 35.0%
AAGTGCTTATCCTAGAGATT+GGG - chr5_1:67471399-67471418 Msa0745670:intron 35.0%
TATCCTAGAGATTGGGATTA+TGG - chr5_1:67471406-67471425 Msa0745670:intron 35.0%
! TGCTCTTTTGCTTTGTGATA+TGG - chr5_1:67471459-67471478 Msa0745670:intron 35.0%
TGTGATATGGCTCATATTAG+TGG - chr5_1:67471472-67471491 Msa0745670:CDS 35.0%
! AGTTACGTTTTTGTGGATAC+AGG - chr5_1:67471576-67471595 Msa0745670:intron 35.0%
ACAATGTCACAGAACTCAAA+AGG + chr5_1:67471613-67471632 Msa0745660:intron 35.0%
CAACAACCCATAAGAGTTTA+AGG - chr5_1:67471638-67471657 Msa0745670:intron 35.0%
ACAACCCATAAGAGTTTAAG+GGG - chr5_1:67471640-67471659 Msa0745670:intron 35.0%
TGGAAATTACTTGATGAGCA+AGG - chr5_1:67471894-67471913 Msa0745670:CDS 35.0%
GGAAATTACTTGATGAGCAA+GGG - chr5_1:67471895-67471914 Msa0745670:CDS 35.0%
CTGAAAATCATCTTGTCTTG+TGG - chr5_1:67471941-67471960 Msa0745670:CDS 35.0%
! TGTATTTTCCATACTCTTGC+AGG - chr5_1:67472064-67472083 Msa0745670:intron 35.0%
TGTTCACAGTAATGTTACAG+AGG + chr5_1:67472114-67472133 Msa0745660:intron 35.0%
!!! GTGAACAAGAATGCTGTTTT+TGG - chr5_1:67472127-67472146 Msa0745670:intron 35.0%
TCTCACACTAGAGATTCAAA+AGG - chr5_1:67472449-67472468 Msa0745670:CDS 35.0%
ACTTCTCAACATCAGCTTTA+AGG + chr5_1:67472536-67472555 Msa0745660:three_prime_UTR 35.0%
TGAGCTAAAGTACAAGGATT+AGG - chr5_1:67472593-67472612 Msa0745670:CDS 35.0%
TAAAGTACAAGGATTAGGCT+GGG - chr5_1:67472598-67472617 Msa0745670:CDS 35.0%
!! TAGTGGGTTTAATCGCTAAT+TGG + chr5_1:67472787-67472806 Msa0745660:three_prime_UTR 35.0%
GGTGTGTAACGAAAATTTAG+TGG + chr5_1:67472804-67472823 Msa0745660:three_prime_UTR 35.0%
TCCATTTGATACGATATTGG+GGG + chr5_1:67472883-67472902 Msa0745660:three_prime_UTR 35.0%
GTCCATTTGATACGATATTG+GGG + chr5_1:67472884-67472903 Msa0745660:three_prime_UTR 35.0%
CGTCCATTTGATACGATATT+GGG + chr5_1:67472885-67472904 Msa0745660:three_prime_UTR 35.0%
CCAATATCGTATCAAATGGA+CGG - chr5_1:67472883-67472902 Msa0745670:five_prime_UTR 35.0%
CAATGGATCCAGTTAGTGAA+TGG - chr5_1:67470831-67470850 Msa0745670:three_prime_UTR 40.0%
ATGGATCCAGTTAGTGAATG+GGG - chr5_1:67470833-67470852 Msa0745670:three_prime_UTR 40.0%
CTATTAGGTCGTGGATTTCT+GGG + chr5_1:67470883-67470902 Msa0745660:three_prime_UTR 40.0%
TCTATTAGGTCGTGGATTTC+TGG + chr5_1:67470884-67470903 Msa0745660:three_prime_UTR 40.0%
! GAAGGAGGTGAAATTTTCTG+AGG + chr5_1:67470948-67470967 Msa0745660:three_prime_UTR 40.0%
! CTTCGGAATATTTGTTGGTG+AGG + chr5_1:67470997-67471016 Msa0745660:three_prime_UTR 40.0%
CTCACCAACAAATATTCCGA+AGG - chr5_1:67470995-67471014 Msa0745670:three_prime_UTR 40.0%
CATGCCTTCGGAATATTTGT+TGG + chr5_1:67471002-67471021 Msa0745660:three_prime_UTR 40.0%
CCTATCATGAGGATTGAGAA+CGG + chr5_1:67471182-67471201 Msa0745660:three_prime_UTR 40.0%
CAATCCTCATGATAGGATCA+TGG - chr5_1:67471186-67471205 Msa0745670:CDS 40.0%
ATGGTTACTATACTTCCGGT+GGG - chr5_1:67471242-67471261 Msa0745670:CDS 40.0%
! CTTTGAGAGTTTGCCGTATA+AGG - chr5_1:67471291-67471310 Msa0745670:intron 40.0%
GTGGTCGAATTCACCTTATA+CGG + chr5_1:67471307-67471326 Msa0745660:intron 40.0%
GTATAAGGTGAATTCGACCA+CGG - chr5_1:67471306-67471325 Msa0745670:intron 40.0%
TATAAGGTGAATTCGACCAC+GGG - chr5_1:67471307-67471326 Msa0745670:intron 40.0%
! TAGGTTGGAAGAGAAAGCTT+TGG - chr5_1:67471345-67471364 Msa0745670:intron 40.0%
! GAAGTGCTTATCCTAGAGAT+TGG - chr5_1:67471398-67471417 Msa0745670:intron 40.0%
CTTCCATAATCCCAATCTCT+AGG + chr5_1:67471412-67471431 Msa0745660:intron 40.0%
CTAGAGATTGGGATTATGGA+AGG - chr5_1:67471410-67471429 Msa0745670:intron 40.0%
AGACAAGTTGCTGATAAGTG+TGG - chr5_1:67471436-67471455 Msa0745670:intron 40.0%
ATAATACCTGAGCAGCAACA+AGG + chr5_1:67471498-67471517 Msa0745660:three_prime_UTR 40.0%
TTGTTGCTGCTCAGGTATTA+TGG - chr5_1:67471497-67471516 Msa0745670:CDS 40.0%
! GAGCTTGAGTTACGTTTTTG+TGG - chr5_1:67471569-67471588 Msa0745670:intron 40.0%
!! TCTTGCTGTTGCTTTGAAAC+AGG - chr5_1:67471813-67471832 Msa0745670:CDS 40.0%
ATTTCCAAGTGCAACTGCAT+TGG + chr5_1:67471881-67471900 Msa0745660:three_prime_UTR 40.0%
!! TTTTGGTGATAGTAGTGCCT+TGG - chr5_1:67472144-67472163 Msa0745670:CDS 40.0%
TGTCACCAGAAAGCCAATAT+TGG - chr5_1:67472255-67472274 Msa0745670:CDS 40.0%
!! GACTTCCAATATTGGCTTTC+TGG + chr5_1:67472263-67472282 Msa0745660:three_prime_UTR 40.0%
TGACATGAGCTTCTGTTAAC+AGG - chr5_1:67472348-67472367 Msa0745670:CDS 40.0%
TCAGCATCATTTGATATGCC+TGG - chr5_1:67472558-67472577 Msa0745670:CDS 40.0%
! TGTACTTTAGCTCAGACACT+AGG + chr5_1:67472587-67472606 Msa0745660:three_prime_UTR 40.0%
AGTGTCTGAGCTAAAGTACA+AGG - chr5_1:67472587-67472606 Msa0745670:CDS 40.0%
CTAAAGTACAAGGATTAGGC+TGG - chr5_1:67472597-67472616 Msa0745670:CDS 40.0%
ATTATATCCCCATCTTGCCA+GGG + chr5_1:67472650-67472669 Msa0745660:three_prime_UTR 40.0%
TCCCCCAATATCGTATCAAA+TGG - chr5_1:67472879-67472898 Msa0745670:five_prime_UTR 40.0%
CCGTCCATTTGATACGATAT+TGG + chr5_1:67472886-67472905 Msa0745660:three_prime_UTR 40.0%
CAATGGATCCAGTTAGTGAA+TGG - chr5_1:67470831-67470850 Msa0745670:three_prime_UTR 40.0%
ATGGATCCAGTTAGTGAATG+GGG - chr5_1:67470833-67470852 Msa0745670:three_prime_UTR 40.0%
CTATTAGGTCGTGGATTTCT+GGG + chr5_1:67470883-67470902 Msa0745660:three_prime_UTR 40.0%
TCTATTAGGTCGTGGATTTC+TGG + chr5_1:67470884-67470903 Msa0745660:three_prime_UTR 40.0%
! GAAGGAGGTGAAATTTTCTG+AGG + chr5_1:67470948-67470967 Msa0745660:three_prime_UTR 40.0%
! CTTCGGAATATTTGTTGGTG+AGG + chr5_1:67470997-67471016 Msa0745660:three_prime_UTR 40.0%
CTCACCAACAAATATTCCGA+AGG - chr5_1:67470995-67471014 Msa0745670:three_prime_UTR 40.0%
CATGCCTTCGGAATATTTGT+TGG + chr5_1:67471002-67471021 Msa0745660:three_prime_UTR 40.0%
CCTATCATGAGGATTGAGAA+CGG + chr5_1:67471182-67471201 Msa0745660:three_prime_UTR 40.0%
CAATCCTCATGATAGGATCA+TGG - chr5_1:67471186-67471205 Msa0745670:CDS 40.0%
ATGGTTACTATACTTCCGGT+GGG - chr5_1:67471242-67471261 Msa0745670:CDS 40.0%
! CTTTGAGAGTTTGCCGTATA+AGG - chr5_1:67471291-67471310 Msa0745670:intron 40.0%
GTGGTCGAATTCACCTTATA+CGG + chr5_1:67471307-67471326 Msa0745660:intron 40.0%
GTATAAGGTGAATTCGACCA+CGG - chr5_1:67471306-67471325 Msa0745670:intron 40.0%
TATAAGGTGAATTCGACCAC+GGG - chr5_1:67471307-67471326 Msa0745670:intron 40.0%
! TAGGTTGGAAGAGAAAGCTT+TGG - chr5_1:67471345-67471364 Msa0745670:intron 40.0%
! GAAGTGCTTATCCTAGAGAT+TGG - chr5_1:67471398-67471417 Msa0745670:intron 40.0%
CTTCCATAATCCCAATCTCT+AGG + chr5_1:67471412-67471431 Msa0745660:intron 40.0%
CTAGAGATTGGGATTATGGA+AGG - chr5_1:67471410-67471429 Msa0745670:intron 40.0%
AGACAAGTTGCTGATAAGTG+TGG - chr5_1:67471436-67471455 Msa0745670:intron 40.0%
ATAATACCTGAGCAGCAACA+AGG + chr5_1:67471498-67471517 Msa0745660:three_prime_UTR 40.0%
TTGTTGCTGCTCAGGTATTA+TGG - chr5_1:67471497-67471516 Msa0745670:CDS 40.0%
! GAGCTTGAGTTACGTTTTTG+TGG - chr5_1:67471569-67471588 Msa0745670:intron 40.0%
!! TCTTGCTGTTGCTTTGAAAC+AGG - chr5_1:67471813-67471832 Msa0745670:CDS 40.0%
ATTTCCAAGTGCAACTGCAT+TGG + chr5_1:67471881-67471900 Msa0745660:three_prime_UTR 40.0%
!! TTTTGGTGATAGTAGTGCCT+TGG - chr5_1:67472144-67472163 Msa0745670:CDS 40.0%
TGTCACCAGAAAGCCAATAT+TGG - chr5_1:67472255-67472274 Msa0745670:CDS 40.0%
!! GACTTCCAATATTGGCTTTC+TGG + chr5_1:67472263-67472282 Msa0745660:three_prime_UTR 40.0%
TGACATGAGCTTCTGTTAAC+AGG - chr5_1:67472348-67472367 Msa0745670:CDS 40.0%
TCAGCATCATTTGATATGCC+TGG - chr5_1:67472558-67472577 Msa0745670:CDS 40.0%
! TGTACTTTAGCTCAGACACT+AGG + chr5_1:67472587-67472606 Msa0745660:three_prime_UTR 40.0%
AGTGTCTGAGCTAAAGTACA+AGG - chr5_1:67472587-67472606 Msa0745670:CDS 40.0%
CTAAAGTACAAGGATTAGGC+TGG - chr5_1:67472597-67472616 Msa0745670:CDS 40.0%
ATTATATCCCCATCTTGCCA+GGG + chr5_1:67472650-67472669 Msa0745660:three_prime_UTR 40.0%
TCCCCCAATATCGTATCAAA+TGG - chr5_1:67472879-67472898 Msa0745670:five_prime_UTR 40.0%
CCGTCCATTTGATACGATAT+TGG + chr5_1:67472886-67472905 Msa0745660:three_prime_UTR 40.0%
! CAAAGAAAAGAGCACGACAG+TGG + chr5_1:67470784-67470803 Msa0745660:three_prime_UTR 45.0%
GTGTTTCCCCATTCACTAAC+TGG + chr5_1:67470842-67470861 Msa0745660:three_prime_UTR 45.0%
TCTGGGTCTACGGTTACTAA+TGG + chr5_1:67470866-67470885 Msa0745660:three_prime_UTR 45.0%
! AAATATTCCGAAGGCATGCC+CGG - chr5_1:67471004-67471023 Msa0745670:three_prime_UTR 45.0%
! AGCGGCAAATGTTTTCGATC+TGG + chr5_1:67471063-67471082 Msa0745660:three_prime_UTR 45.0%
GTCAACGTTCAACCTTACTC+CGG - chr5_1:67471127-67471146 Msa0745670:CDS 45.0%
ATCATGAGGATTGAGAACGG+CGG + chr5_1:67471179-67471198 Msa0745660:three_prime_UTR 45.0%
CCGTTCTCAATCCTCATGAT+AGG - chr5_1:67471179-67471198 Msa0745670:CDS 45.0%
AGTCCCATGATCCTATCATG+AGG + chr5_1:67471193-67471212 Msa0745660:three_prime_UTR 45.0%
TCATGATAGGATCATGGGAC+TGG - chr5_1:67471192-67471211 Msa0745670:CDS 45.0%
TGAGTCAAATGTCCACCAGA+AGG + chr5_1:67471223-67471242 Msa0745660:three_prime_UTR 45.0%
! TCTGGTGGACATTTGACTCA+TGG - chr5_1:67471223-67471242 Msa0745670:CDS 45.0%
CATGGTTACTATACTTCCGG+TGG - chr5_1:67471241-67471260 Msa0745670:CDS 45.0%
TTCCGGTGGGAAGAAGATTT+CGG - chr5_1:67471255-67471274 Msa0745670:CDS 45.0%
ATAAGGTGAATTCGACCACG+GGG - chr5_1:67471308-67471327 Msa0745670:intron 45.0%
GGGACCCCTTAAACTCTTAT+GGG + chr5_1:67471647-67471666 Msa0745660:intron 45.0%
TGGGACCCCTTAAACTCTTA+TGG + chr5_1:67471648-67471667 Msa0745660:intron 45.0%
ATAAGAGTTTAAGGGGTCCC+AGG - chr5_1:67471647-67471666 Msa0745670:intron 45.0%
TAAGAGTTTAAGGGGTCCCA+GGG - chr5_1:67471648-67471667 Msa0745670:intron 45.0%
TAGAAGATCATACCAGCCCT+GGG + chr5_1:67471667-67471686 Msa0745660:three_prime_UTR 45.0%
TGGTATGATCTTCTACCGGA+AGG - chr5_1:67471672-67471691 Msa0745670:CDS 45.0%
GGTATGATCTTCTACCGGAA+GGG - chr5_1:67471673-67471692 Msa0745670:CDS 45.0%
!! TGCATTGGCCTTAACTTGCT+TGG + chr5_1:67471866-67471885 Msa0745660:three_prime_UTR 45.0%
! AAGGGATACAGTCTTGTCAC+TGG - chr5_1:67471913-67471932 Msa0745670:CDS 45.0%
CCTTATTGCCTGCAAGAGTA+TGG + chr5_1:67472075-67472094 Msa0745660:intron 45.0%
CCATACTCTTGCAGGCAATA+AGG - chr5_1:67472072-67472091 Msa0745670:intron 45.0%
TACTCTTGCAGGCAATAAGG+TGG - chr5_1:67472075-67472094 Msa0745670:intron 45.0%
CTAGTGTGAGAGTTACTGCA+CGG + chr5_1:67472440-67472459 Msa0745660:three_prime_UTR 45.0%
CTTCCAAAATGACTCTACCC+TGG - chr5_1:67472630-67472649 Msa0745670:CDS 45.0%
! TTGCCAGGGTAGAGTCATTT+TGG + chr5_1:67472636-67472655 Msa0745660:three_prime_UTR 45.0%
CATTATATCCCCATCTTGCC+AGG + chr5_1:67472651-67472670 Msa0745660:three_prime_UTR 45.0%
! CAAAGAAAAGAGCACGACAG+TGG + chr5_1:67470784-67470803 Msa0745660:three_prime_UTR 45.0%
GTGTTTCCCCATTCACTAAC+TGG + chr5_1:67470842-67470861 Msa0745660:three_prime_UTR 45.0%
TCTGGGTCTACGGTTACTAA+TGG + chr5_1:67470866-67470885 Msa0745660:three_prime_UTR 45.0%
! AAATATTCCGAAGGCATGCC+CGG - chr5_1:67471004-67471023 Msa0745670:three_prime_UTR 45.0%
! AGCGGCAAATGTTTTCGATC+TGG + chr5_1:67471063-67471082 Msa0745660:three_prime_UTR 45.0%
GTCAACGTTCAACCTTACTC+CGG - chr5_1:67471127-67471146 Msa0745670:CDS 45.0%
ATCATGAGGATTGAGAACGG+CGG + chr5_1:67471179-67471198 Msa0745660:three_prime_UTR 45.0%
CCGTTCTCAATCCTCATGAT+AGG - chr5_1:67471179-67471198 Msa0745670:CDS 45.0%
AGTCCCATGATCCTATCATG+AGG + chr5_1:67471193-67471212 Msa0745660:three_prime_UTR 45.0%
TCATGATAGGATCATGGGAC+TGG - chr5_1:67471192-67471211 Msa0745670:CDS 45.0%
TGAGTCAAATGTCCACCAGA+AGG + chr5_1:67471223-67471242 Msa0745660:three_prime_UTR 45.0%
! TCTGGTGGACATTTGACTCA+TGG - chr5_1:67471223-67471242 Msa0745670:CDS 45.0%
CATGGTTACTATACTTCCGG+TGG - chr5_1:67471241-67471260 Msa0745670:CDS 45.0%
TTCCGGTGGGAAGAAGATTT+CGG - chr5_1:67471255-67471274 Msa0745670:CDS 45.0%
ATAAGGTGAATTCGACCACG+GGG - chr5_1:67471308-67471327 Msa0745670:intron 45.0%
GGGACCCCTTAAACTCTTAT+GGG + chr5_1:67471647-67471666 Msa0745660:intron 45.0%
TGGGACCCCTTAAACTCTTA+TGG + chr5_1:67471648-67471667 Msa0745660:intron 45.0%
ATAAGAGTTTAAGGGGTCCC+AGG - chr5_1:67471647-67471666 Msa0745670:intron 45.0%
TAAGAGTTTAAGGGGTCCCA+GGG - chr5_1:67471648-67471667 Msa0745670:intron 45.0%
TAGAAGATCATACCAGCCCT+GGG + chr5_1:67471667-67471686 Msa0745660:three_prime_UTR 45.0%
TGGTATGATCTTCTACCGGA+AGG - chr5_1:67471672-67471691 Msa0745670:CDS 45.0%
GGTATGATCTTCTACCGGAA+GGG - chr5_1:67471673-67471692 Msa0745670:CDS 45.0%
!! TGCATTGGCCTTAACTTGCT+TGG + chr5_1:67471866-67471885 Msa0745660:three_prime_UTR 45.0%
! AAGGGATACAGTCTTGTCAC+TGG - chr5_1:67471913-67471932 Msa0745670:CDS 45.0%
CCTTATTGCCTGCAAGAGTA+TGG + chr5_1:67472075-67472094 Msa0745660:intron 45.0%
CCATACTCTTGCAGGCAATA+AGG - chr5_1:67472072-67472091 Msa0745670:intron 45.0%
TACTCTTGCAGGCAATAAGG+TGG - chr5_1:67472075-67472094 Msa0745670:intron 45.0%
CTAGTGTGAGAGTTACTGCA+CGG + chr5_1:67472440-67472459 Msa0745660:three_prime_UTR 45.0%
CTTCCAAAATGACTCTACCC+TGG - chr5_1:67472630-67472649 Msa0745670:CDS 45.0%
! TTGCCAGGGTAGAGTCATTT+TGG + chr5_1:67472636-67472655 Msa0745660:three_prime_UTR 45.0%
CATTATATCCCCATCTTGCC+AGG + chr5_1:67472651-67472670 Msa0745660:three_prime_UTR 45.0%
! GTCGTGGATTTCTGGGTCTA+CGG + chr5_1:67470876-67470895 Msa0745660:three_prime_UTR 50.0%
AGGCAATGAGTTCGATTCCG+CGG + chr5_1:67470928-67470947 Msa0745660:three_prime_UTR 50.0%
TAGGGCTTCAATGACTGCGA+AGG + chr5_1:67470966-67470985 Msa0745660:three_prime_UTR 50.0%
TTCGCAGTCATTGAAGCCCT+AGG - chr5_1:67470965-67470984 Msa0745670:three_prime_UTR 50.0%
ATGCCCGGTAACCGTTACTA+CGG - chr5_1:67471019-67471038 Msa0745670:three_prime_UTR 50.0%
ATTCGTTGCCGCCGTAGTAA+CGG + chr5_1:67471033-67471052 Msa0745660:three_prime_UTR 50.0%
ATTGAGAACGGCGGTGTAAG+CGG + chr5_1:67471170-67471189 Msa0745660:three_prime_UTR 50.0%
ATGGGACTGGATCTACCTTC+TGG - chr5_1:67471205-67471224 Msa0745670:CDS 50.0%
AGCCGAAATCTTCTTCCCAC+CGG + chr5_1:67471260-67471279 Msa0745660:three_prime_UTR 50.0%
GTAGAAGATCATACCAGCCC+TGG + chr5_1:67471668-67471687 Msa0745660:three_prime_UTR 50.0%
! GGGCTGGTATGATCTTCTAC+CGG - chr5_1:67471668-67471687 Msa0745670:CDS 50.0%
GGACCTAAGCCACCTAAGAA+GGG - chr5_1:67471694-67471713 Msa0745670:CDS 50.0%
TGACCCTTCTTAGGTGGCTT+AGG + chr5_1:67471700-67471719 Msa0745660:three_prime_UTR 50.0%
TTCTCAGGCTGACCCTTCTT+AGG + chr5_1:67471709-67471728 Msa0745660:three_prime_UTR 50.0%
!! CAACAGCAAGAGCACCAATC+TGG + chr5_1:67471804-67471823 Msa0745660:three_prime_UTR 50.0%
GGCCTATGCCAAGCAAGTTA+AGG - chr5_1:67471855-67471874 Msa0745670:CDS 50.0%
!! GGCCTTAACTTGCTTGGCAT+AGG + chr5_1:67471860-67471879 Msa0745660:three_prime_UTR 50.0%
AAGGCCAATGCAGTTGCACT+TGG - chr5_1:67471874-67471893 Msa0745670:CDS 50.0%
! GGATACAGTCTTGTCACTGG+AGG - chr5_1:67471916-67471935 Msa0745670:CDS 50.0%
GTTTACCGGTCAAGCCAAGA+GGG + chr5_1:67471975-67471994 Msa0745660:three_prime_UTR 50.0%
AGTTTACCGGTCAAGCCAAG+AGG + chr5_1:67471976-67471995 Msa0745660:three_prime_UTR 50.0%
TTACCAATCCTGACTCCTCC+AGG + chr5_1:67472172-67472191 Msa0745660:three_prime_UTR 50.0%
TGAGAGTTACTGCACGGTGA+AGG + chr5_1:67472434-67472453 Msa0745660:three_prime_UTR 50.0%
AGCTCAGACACTAGGAATCC+AGG + chr5_1:67472579-67472598 Msa0745660:three_prime_UTR 50.0%
ATGACTCTACCCTGGCAAGA+TGG - chr5_1:67472638-67472657 Msa0745670:CDS 50.0%
TGACTCTACCCTGGCAAGAT+GGG - chr5_1:67472639-67472658 Msa0745670:CDS 50.0%
! GTCGTGGATTTCTGGGTCTA+CGG + chr5_1:67470876-67470895 Msa0745660:three_prime_UTR 50.0%
AGGCAATGAGTTCGATTCCG+CGG + chr5_1:67470928-67470947 Msa0745660:three_prime_UTR 50.0%
TAGGGCTTCAATGACTGCGA+AGG + chr5_1:67470966-67470985 Msa0745660:three_prime_UTR 50.0%
TTCGCAGTCATTGAAGCCCT+AGG - chr5_1:67470965-67470984 Msa0745670:three_prime_UTR 50.0%
ATGCCCGGTAACCGTTACTA+CGG - chr5_1:67471019-67471038 Msa0745670:three_prime_UTR 50.0%
ATTCGTTGCCGCCGTAGTAA+CGG + chr5_1:67471033-67471052 Msa0745660:three_prime_UTR 50.0%
ATTGAGAACGGCGGTGTAAG+CGG + chr5_1:67471170-67471189 Msa0745660:three_prime_UTR 50.0%
ATGGGACTGGATCTACCTTC+TGG - chr5_1:67471205-67471224 Msa0745670:CDS 50.0%
AGCCGAAATCTTCTTCCCAC+CGG + chr5_1:67471260-67471279 Msa0745660:three_prime_UTR 50.0%
GTAGAAGATCATACCAGCCC+TGG + chr5_1:67471668-67471687 Msa0745660:three_prime_UTR 50.0%
! GGGCTGGTATGATCTTCTAC+CGG - chr5_1:67471668-67471687 Msa0745670:CDS 50.0%
GGACCTAAGCCACCTAAGAA+GGG - chr5_1:67471694-67471713 Msa0745670:CDS 50.0%
TGACCCTTCTTAGGTGGCTT+AGG + chr5_1:67471700-67471719 Msa0745660:three_prime_UTR 50.0%
TTCTCAGGCTGACCCTTCTT+AGG + chr5_1:67471709-67471728 Msa0745660:three_prime_UTR 50.0%
!! CAACAGCAAGAGCACCAATC+TGG + chr5_1:67471804-67471823 Msa0745660:three_prime_UTR 50.0%
GGCCTATGCCAAGCAAGTTA+AGG - chr5_1:67471855-67471874 Msa0745670:CDS 50.0%
!! GGCCTTAACTTGCTTGGCAT+AGG + chr5_1:67471860-67471879 Msa0745660:three_prime_UTR 50.0%
AAGGCCAATGCAGTTGCACT+TGG - chr5_1:67471874-67471893 Msa0745670:CDS 50.0%
! GGATACAGTCTTGTCACTGG+AGG - chr5_1:67471916-67471935 Msa0745670:CDS 50.0%
GTTTACCGGTCAAGCCAAGA+GGG + chr5_1:67471975-67471994 Msa0745660:three_prime_UTR 50.0%
AGTTTACCGGTCAAGCCAAG+AGG + chr5_1:67471976-67471995 Msa0745660:three_prime_UTR 50.0%
TTACCAATCCTGACTCCTCC+AGG + chr5_1:67472172-67472191 Msa0745660:three_prime_UTR 50.0%
TGAGAGTTACTGCACGGTGA+AGG + chr5_1:67472434-67472453 Msa0745660:three_prime_UTR 50.0%
AGCTCAGACACTAGGAATCC+AGG + chr5_1:67472579-67472598 Msa0745660:three_prime_UTR 50.0%
ATGACTCTACCCTGGCAAGA+TGG - chr5_1:67472638-67472657 Msa0745670:CDS 50.0%
TGACTCTACCCTGGCAAGAT+GGG - chr5_1:67472639-67472658 Msa0745670:CDS 50.0%
GAAAAACGCCGTCAATGCCG+CGG - chr5_1:67470908-67470927 Msa0745670:three_prime_UTR 55.0%
! GTTCGATTCCGCGGCATTGA+CGG + chr5_1:67470919-67470938 Msa0745660:three_prime_UTR 55.0%
GGCTTCAATGACTGCGAAGG+AGG + chr5_1:67470963-67470982 Msa0745660:three_prime_UTR 55.0%
TTGAACGTTGACACCCCAGG+TGG + chr5_1:67471119-67471138 Msa0745660:three_prime_UTR 55.0%
AGGTTGAACGTTGACACCCC+AGG + chr5_1:67471122-67471141 Msa0745660:three_prime_UTR 55.0%
TCAACCTTACTCCGGCTCAC+CGG - chr5_1:67471135-67471154 Msa0745670:CDS 55.0%
GTGTAAGCGGCGAAATTCGC+CGG + chr5_1:67471157-67471176 Msa0745660:three_prime_UTR 55.0%
GGACTGGATCTACCTTCTGG+TGG - chr5_1:67471208-67471227 Msa0745670:CDS 55.0%
!! TAGTGGCCTTGTTGCTGCTC+AGG - chr5_1:67471489-67471508 Msa0745670:CDS 55.0%
TAGGTGGCTTAGGTCCCTTC+CGG + chr5_1:67471690-67471709 Msa0745660:three_prime_UTR 55.0%
GGGACCTAAGCCACCTAAGA+AGG - chr5_1:67471693-67471712 Msa0745670:CDS 55.0%
TCAGGCTGACCCTTCTTAGG+TGG + chr5_1:67471706-67471725 Msa0745660:three_prime_UTR 55.0%
!!! TGCTGTTTTCCCCTCCCTTC+AGG - chr5_1:67471762-67471781 Msa0745670:CDS 55.0%
!! GCTGTTTTCCCCTCCCTTCA+GGG - chr5_1:67471763-67471782 Msa0745670:CDS 55.0%
GTTGTGAGGACCACCCTGAA+GGG + chr5_1:67471779-67471798 Msa0745660:three_prime_UTR 55.0%
GGTCCTCACAACCACCAGAT+TGG - chr5_1:67471787-67471806 Msa0745670:CDS 55.0%
GCACCAATCTGGTGGTTGTG+AGG + chr5_1:67471793-67471812 Msa0745660:three_prime_UTR 55.0%
!! CAGCAAGAGCACCAATCTGG+TGG + chr5_1:67471801-67471820 Msa0745660:three_prime_UTR 55.0%
TTGGCATAGGCCTTGAACCC+AGG + chr5_1:67471847-67471866 Msa0745660:three_prime_UTR 55.0%
GATAGTAGTGCCTTGGCACC+TGG - chr5_1:67472151-67472170 Msa0745670:CDS 55.0%
TGCCCCAGCTATGACTTCCA+GGG - chr5_1:67472371-67472390 Msa0745670:CDS 55.0%
ACCCCTGGAAGTCATAGCTG+GGG + chr5_1:67472376-67472395 Msa0745660:three_prime_UTR 55.0%
GACCCCTGGAAGTCATAGCT+GGG + chr5_1:67472377-67472396 Msa0745660:three_prime_UTR 55.0%
AGACCCCTGGAAGTCATAGC+TGG + chr5_1:67472378-67472397 Msa0745660:three_prime_UTR 55.0%
AGCTATGACTTCCAGGGGTC+TGG - chr5_1:67472377-67472396 Msa0745670:CDS 55.0%
TTCCAGGGGTCTGGTTGAGA+AGG - chr5_1:67472386-67472405 Msa0745670:CDS 55.0%
GACTCTACCCTGGCAAGATG+GGG - chr5_1:67472640-67472659 Msa0745670:CDS 55.0%
GAAAAACGCCGTCAATGCCG+CGG - chr5_1:67470908-67470927 Msa0745670:three_prime_UTR 55.0%
! GTTCGATTCCGCGGCATTGA+CGG + chr5_1:67470919-67470938 Msa0745660:three_prime_UTR 55.0%
GGCTTCAATGACTGCGAAGG+AGG + chr5_1:67470963-67470982 Msa0745660:three_prime_UTR 55.0%
TTGAACGTTGACACCCCAGG+TGG + chr5_1:67471119-67471138 Msa0745660:three_prime_UTR 55.0%
AGGTTGAACGTTGACACCCC+AGG + chr5_1:67471122-67471141 Msa0745660:three_prime_UTR 55.0%
TCAACCTTACTCCGGCTCAC+CGG - chr5_1:67471135-67471154 Msa0745670:CDS 55.0%
GTGTAAGCGGCGAAATTCGC+CGG + chr5_1:67471157-67471176 Msa0745660:three_prime_UTR 55.0%
GGACTGGATCTACCTTCTGG+TGG - chr5_1:67471208-67471227 Msa0745670:CDS 55.0%
!! TAGTGGCCTTGTTGCTGCTC+AGG - chr5_1:67471489-67471508 Msa0745670:CDS 55.0%
TAGGTGGCTTAGGTCCCTTC+CGG + chr5_1:67471690-67471709 Msa0745660:three_prime_UTR 55.0%
GGGACCTAAGCCACCTAAGA+AGG - chr5_1:67471693-67471712 Msa0745670:CDS 55.0%
TCAGGCTGACCCTTCTTAGG+TGG + chr5_1:67471706-67471725 Msa0745660:three_prime_UTR 55.0%
!!! TGCTGTTTTCCCCTCCCTTC+AGG - chr5_1:67471762-67471781 Msa0745670:CDS 55.0%
!! GCTGTTTTCCCCTCCCTTCA+GGG - chr5_1:67471763-67471782 Msa0745670:CDS 55.0%
GTTGTGAGGACCACCCTGAA+GGG + chr5_1:67471779-67471798 Msa0745660:three_prime_UTR 55.0%
GGTCCTCACAACCACCAGAT+TGG - chr5_1:67471787-67471806 Msa0745670:CDS 55.0%
GCACCAATCTGGTGGTTGTG+AGG + chr5_1:67471793-67471812 Msa0745660:three_prime_UTR 55.0%
!! CAGCAAGAGCACCAATCTGG+TGG + chr5_1:67471801-67471820 Msa0745660:three_prime_UTR 55.0%
TTGGCATAGGCCTTGAACCC+AGG + chr5_1:67471847-67471866 Msa0745660:three_prime_UTR 55.0%
GATAGTAGTGCCTTGGCACC+TGG - chr5_1:67472151-67472170 Msa0745670:CDS 55.0%
TGCCCCAGCTATGACTTCCA+GGG - chr5_1:67472371-67472390 Msa0745670:CDS 55.0%
ACCCCTGGAAGTCATAGCTG+GGG + chr5_1:67472376-67472395 Msa0745660:three_prime_UTR 55.0%
GACCCCTGGAAGTCATAGCT+GGG + chr5_1:67472377-67472396 Msa0745660:three_prime_UTR 55.0%
AGACCCCTGGAAGTCATAGC+TGG + chr5_1:67472378-67472397 Msa0745660:three_prime_UTR 55.0%
AGCTATGACTTCCAGGGGTC+TGG - chr5_1:67472377-67472396 Msa0745670:CDS 55.0%
TTCCAGGGGTCTGGTTGAGA+AGG - chr5_1:67472386-67472405 Msa0745670:CDS 55.0%
GACTCTACCCTGGCAAGATG+GGG - chr5_1:67472640-67472659 Msa0745670:CDS 55.0%
!! GTTGGTGAGGGCGCTTCCTA+GGG + chr5_1:67470984-67471003 Msa0745660:three_prime_UTR 60.0%
!! TGTTGGTGAGGGCGCTTCCT+AGG + chr5_1:67470985-67471004 Msa0745660:three_prime_UTR 60.0%
ACGGTTACCGGGCATGCCTT+CGG + chr5_1:67471014-67471033 Msa0745660:three_prime_UTR 60.0%
CCGCCGTAGTAACGGTTACC+GGG + chr5_1:67471025-67471044 Msa0745660:three_prime_UTR 60.0%
CCCGGTAACCGTTACTACGG+CGG - chr5_1:67471022-67471041 Msa0745670:exon 60.0%
GCCGCCGTAGTAACGGTTAC+CGG + chr5_1:67471026-67471045 Msa0745660:three_prime_UTR 60.0%
AACGTTGACACCCCAGGTGG+CGG + chr5_1:67471116-67471135 Msa0745660:three_prime_UTR 60.0%
AGTTTAAGGGGTCCCAGGGC+TGG - chr5_1:67471652-67471671 Msa0745670:intron 60.0%
! GTTTTCCCCTCCCTTCAGGG+TGG - chr5_1:67471766-67471785 Msa0745670:CDS 60.0%
TGAGGACCACCCTGAAGGGA+GGG + chr5_1:67471775-67471794 Msa0745660:three_prime_UTR 60.0%
GGTTGTGAGGACCACCCTGA+AGG + chr5_1:67471780-67471799 Msa0745660:three_prime_UTR 60.0%
TTGAAACAGGCCACCACGCC+TGG - chr5_1:67471826-67471845 Msa0745670:CDS 60.0%
TGAAACAGGCCACCACGCCT+GGG - chr5_1:67471827-67471846 Msa0745670:CDS 60.0%
ATAGGCCTTGAACCCAGGCG+TGG + chr5_1:67471842-67471861 Msa0745660:three_prime_UTR 60.0%
TTGTGGGATCTCCGCCCTCT+TGG - chr5_1:67471958-67471977 Msa0745670:CDS 60.0%
TACCGGTCAAGCCAAGAGGG+CGG + chr5_1:67471972-67471991 Msa0745660:three_prime_UTR 60.0%
AGTAGTGCCTTGGCACCTGG+AGG - chr5_1:67472154-67472173 Msa0745670:CDS 60.0%
GCACCTGGAGGAGTCAGGAT+TGG - chr5_1:67472166-67472185 Msa0745670:CDS 60.0%
GTGCCCCAGCTATGACTTCC+AGG - chr5_1:67472370-67472389 Msa0745670:CDS 60.0%
GCCCCAGCTATGACTTCCAG+GGG - chr5_1:67472372-67472391 Msa0745670:CDS 60.0%
GTCCTTCTCAACCAGACCCC+TGG + chr5_1:67472391-67472410 Msa0745660:three_prime_UTR 60.0%
!! GTTGGTGAGGGCGCTTCCTA+GGG + chr5_1:67470984-67471003 Msa0745660:three_prime_UTR 60.0%
!! TGTTGGTGAGGGCGCTTCCT+AGG + chr5_1:67470985-67471004 Msa0745660:three_prime_UTR 60.0%
ACGGTTACCGGGCATGCCTT+CGG + chr5_1:67471014-67471033 Msa0745660:three_prime_UTR 60.0%
CCGCCGTAGTAACGGTTACC+GGG + chr5_1:67471025-67471044 Msa0745660:three_prime_UTR 60.0%
CCCGGTAACCGTTACTACGG+CGG - chr5_1:67471022-67471041 Msa0745670:exon 60.0%
GCCGCCGTAGTAACGGTTAC+CGG + chr5_1:67471026-67471045 Msa0745660:three_prime_UTR 60.0%
AACGTTGACACCCCAGGTGG+CGG + chr5_1:67471116-67471135 Msa0745660:three_prime_UTR 60.0%
AGTTTAAGGGGTCCCAGGGC+TGG - chr5_1:67471652-67471671 Msa0745670:intron 60.0%
! GTTTTCCCCTCCCTTCAGGG+TGG - chr5_1:67471766-67471785 Msa0745670:CDS 60.0%
TGAGGACCACCCTGAAGGGA+GGG + chr5_1:67471775-67471794 Msa0745660:three_prime_UTR 60.0%
GGTTGTGAGGACCACCCTGA+AGG + chr5_1:67471780-67471799 Msa0745660:three_prime_UTR 60.0%
TTGAAACAGGCCACCACGCC+TGG - chr5_1:67471826-67471845 Msa0745670:CDS 60.0%
TGAAACAGGCCACCACGCCT+GGG - chr5_1:67471827-67471846 Msa0745670:CDS 60.0%
ATAGGCCTTGAACCCAGGCG+TGG + chr5_1:67471842-67471861 Msa0745660:three_prime_UTR 60.0%
TTGTGGGATCTCCGCCCTCT+TGG - chr5_1:67471958-67471977 Msa0745670:CDS 60.0%
TACCGGTCAAGCCAAGAGGG+CGG + chr5_1:67471972-67471991 Msa0745660:three_prime_UTR 60.0%
AGTAGTGCCTTGGCACCTGG+AGG - chr5_1:67472154-67472173 Msa0745670:CDS 60.0%
GCACCTGGAGGAGTCAGGAT+TGG - chr5_1:67472166-67472185 Msa0745670:CDS 60.0%
GTGCCCCAGCTATGACTTCC+AGG - chr5_1:67472370-67472389 Msa0745670:CDS 60.0%
GCCCCAGCTATGACTTCCAG+GGG - chr5_1:67472372-67472391 Msa0745670:CDS 60.0%
GTCCTTCTCAACCAGACCCC+TGG + chr5_1:67472391-67472410 Msa0745660:three_prime_UTR 60.0%
TTCGCCGGTGAGCCGGAGTA+AGG + chr5_1:67471142-67471161 Msa0745660:three_prime_UTR 65.0%
GGCGAAATTCGCCGGTGAGC+CGG + chr5_1:67471149-67471168 Msa0745660:three_prime_UTR 65.0%
GAGGACCACCCTGAAGGGAG+GGG + chr5_1:67471774-67471793 Msa0745660:three_prime_UTR 65.0%
GTGAGGACCACCCTGAAGGG+AGG + chr5_1:67471776-67471795 Msa0745660:three_prime_UTR 65.0%
! CTCCGCCCTCTTGGCTTGAC+CGG - chr5_1:67471967-67471986 Msa0745670:CDS 65.0%
CCTGACTCCTCCAGGTGCCA+AGG + chr5_1:67472164-67472183 Msa0745660:three_prime_UTR 65.0%
CCTTGGCACCTGGAGGAGTC+AGG - chr5_1:67472161-67472180 Msa0745670:CDS 65.0%
TTCGCCGGTGAGCCGGAGTA+AGG + chr5_1:67471142-67471161 Msa0745660:three_prime_UTR 65.0%
GGCGAAATTCGCCGGTGAGC+CGG + chr5_1:67471149-67471168 Msa0745660:three_prime_UTR 65.0%
GAGGACCACCCTGAAGGGAG+GGG + chr5_1:67471774-67471793 Msa0745660:three_prime_UTR 65.0%
GTGAGGACCACCCTGAAGGG+AGG + chr5_1:67471776-67471795 Msa0745660:three_prime_UTR 65.0%
! CTCCGCCCTCTTGGCTTGAC+CGG - chr5_1:67471967-67471986 Msa0745670:CDS 65.0%
CCTGACTCCTCCAGGTGCCA+AGG + chr5_1:67472164-67472183 Msa0745660:three_prime_UTR 65.0%
CCTTGGCACCTGGAGGAGTC+AGG - chr5_1:67472161-67472180 Msa0745670:CDS 65.0%
! AGGCGGTGAGAGCGCGTGAG+CGG + chr5_1:67471081-67471100 Msa0745660:three_prime_UTR 70.0%
! GGCGGCGTCGAGATGGAAGG+CGG + chr5_1:67471098-67471117 Msa0745660:three_prime_UTR 70.0%
! GGTGGCGGCGTCGAGATGGA+AGG + chr5_1:67471101-67471120 Msa0745660:three_prime_UTR 70.0%
TCCATCTCGACGCCGCCACC+TGG - chr5_1:67471101-67471120 Msa0745670:CDS 70.0%
CCATCTCGACGCCGCCACCT+GGG - chr5_1:67471102-67471121 Msa0745670:CDS 70.0%
CATCTCGACGCCGCCACCTG+GGG - chr5_1:67471103-67471122 Msa0745670:CDS 70.0%
GGCCACCACGCCTGGGTTCA+AGG - chr5_1:67471834-67471853 Msa0745670:CDS 70.0%
GGCCTTGAACCCAGGCGTGG+TGG + chr5_1:67471839-67471858 Msa0745660:three_prime_UTR 70.0%
! AGGCGGTGAGAGCGCGTGAG+CGG + chr5_1:67471081-67471100 Msa0745660:three_prime_UTR 70.0%
! GGCGGCGTCGAGATGGAAGG+CGG + chr5_1:67471098-67471117 Msa0745660:three_prime_UTR 70.0%
! GGTGGCGGCGTCGAGATGGA+AGG + chr5_1:67471101-67471120 Msa0745660:three_prime_UTR 70.0%
TCCATCTCGACGCCGCCACC+TGG - chr5_1:67471101-67471120 Msa0745670:CDS 70.0%
CCATCTCGACGCCGCCACCT+GGG - chr5_1:67471102-67471121 Msa0745670:CDS 70.0%
CATCTCGACGCCGCCACCTG+GGG - chr5_1:67471103-67471122 Msa0745670:CDS 70.0%
GGCCACCACGCCTGGGTTCA+AGG - chr5_1:67471834-67471853 Msa0745670:CDS 70.0%
GGCCTTGAACCCAGGCGTGG+TGG + chr5_1:67471839-67471858 Msa0745660:three_prime_UTR 70.0%
! CCCAGGTGGCGGCGTCGAGA+TGG + chr5_1:67471105-67471124 Msa0745660:three_prime_UTR 75.0%
! CCCAGGTGGCGGCGTCGAGA+TGG + chr5_1:67471105-67471124 Msa0745660:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 67470746 67472907 67470746 ID=Msa0745670;Name=Msa0745670
chr5_1 mRNA 67470746 67472907 67470746 ID=Msa0745670-mRNA-1;Parent=Msa0745670;Name=Msa0745670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=87|1|1|1|1|1|4|293|471
chr5_1 exon 67470746 67471283 67470746 ID=Msa0745670-mRNA-1:exon:20023;Parent=Msa0745670-mRNA-1
chr5_1 exon 67471466 67471567 67471466 ID=Msa0745670-mRNA-1:exon:20022;Parent=Msa0745670-mRNA-1
chr5_1 exon 67471665 67472055 67471665 ID=Msa0745670-mRNA-1:exon:20021;Parent=Msa0745670-mRNA-1
chr5_1 exon 67472143 67472907 67472143 ID=Msa0745670-mRNA-1:exon:20020;Parent=Msa0745670-mRNA-1
chr5_1 five_prime_UTR 67472821 67472907 67472821 ID=Msa0745670-mRNA-1:five_prime_utr;Parent=Msa0745670-mRNA-1
chr5_1 CDS 67472143 67472820 67472143 ID=Msa0745670-mRNA-1:cds;Parent=Msa0745670-mRNA-1
chr5_1 CDS 67471665 67472055 67471665 ID=Msa0745670-mRNA-1:cds;Parent=Msa0745670-mRNA-1
chr5_1 CDS 67471466 67471567 67471466 ID=Msa0745670-mRNA-1:cds;Parent=Msa0745670-mRNA-1
chr5_1 CDS 67471039 67471283 67471039 ID=Msa0745670-mRNA-1:cds;Parent=Msa0745670-mRNA-1
chr5_1 three_prime_UTR 67470746 67471038 67470746 ID=Msa0745670-mRNA-1:three_prime_utr;Parent=Msa0745670-mRNA-1
Gene Sequence

>Msa0745670

ATGGATCCAGTTAGTGAATGGGGAAACACACCATTAGTAACCGTAGACCCAGAAATCCACGACCTAATAGAAAAAGAAAAACGCCGTCAATGCCGCGGAATCGAACTCATTGCCTCAGAAAATTTCACCTCCTTCGCAGTCATTGAAGCCCTAGGAAGCGCCCTCACCAACAAATATTCCGAAGGCATGCCCGGTAACCGTTACTACGGCGGCAACGAATTCATCGACCAGATCGAAAACATTTGCCGCTCACGCGCTCTCACCGCCTTCCATCTCGACGCCGCCACCTGGGGTGTCAACGTTCAACCTTACTCCGGCTCACCGGCGAATTTCGCCGCTTACACCGCCGTTCTCAATCCTCATGATAGGATCATGGGACTGGATCTACCTTCTGGTGGACATTTGACTCATGGTTACTATACTTCCGGTGGGAAGAAGATTTCGGCTACTTCGATTTACTTTGAGAGTTTGCCGTATAAGGTGAATTCGACCACGGGGTTTATTGATTATGATAGGTTGGAAGAGAAAGCTTTGGATTTTAGACCAAAGTTGATTATTTGTGGTGGAAGTGCTTATCCTAGAGATTGGGATTATGGAAGGTTTAGACAAGTTGCTGATAAGTGTGGTGCTCTTTTGCTTTGTGATATGGCTCATATTAGTGGCCTTGTTGCTGCTCAGGAAGCTAACAATCCTTTTGAGTTCTGTGACATTGTCACAACAACAACCCATAAGAGTTTAAGGGGTCCCAGGGCTGGTATGATCTTCTACCGGAAGGGACCTAAGCCACCTAAGAAGGGTCAGCCTGAGAATGCTGTTTATGATTTTGAAGACAAAATCAACTTTGCTGTTTTCCCCTCCCTTCAGGGTGGTCCTCACAACCACCAGATTGGTGCTCTTGCTGTTGCTTTGAAACAGGCCACCACGCCTGGGTTCAAGGCCTATGCCAAGCAAGTTAAGGCCAATGCAGTTGCACTTGGAAATTACTTGATGAGCAAGGGATACAGTCTTGTCACTGGAGGAACTGAAAATCATCTTGTCTTGTGGGATCTCCGCCCTCTTGGCTTGACCGGCAATAAGGTGGAAAAACTTTGTGACCTCTGTAACATTACTGTGAACAAGAATGCTGTTTTTGGTGATAGTAGTGCCTTGGCACCTGGAGGAGTCAGGATTGGTGCCCCAGCTATGACTTCCAGGGGTCTGGTTGAGAAGGACTTCGAGCAGATTGCAGAGTTCCTTCACCGTGCAGTAACTCTCACACTAGAGATTCAAAAGGAATATGGTAAACTTTTGAAGGATTTCAACAAGGGCTTAGTGAACAACAAAGCTCTTGAAGACCTTAAAGCTGATGTTGAGAAGTTTTCAGCATCATTTGATATGCCTGGATTCCTAGTGTCTGAGCTAAAGTACAAGGATTAG
Protein sequence

>Msa0745670

MDPVSEWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDQIENICRSRALTAFHLDAATWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDRLEEKALDFRPKLIICGGSAYPRDWDYGRFRQVADKCGALLLCDMAHISGLVAAQEANNPFEFCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQATTPGFKAYAKQVKANAVALGNYLMSKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKALEDLKADVEKFSASFDMPGFLVSELKYKD*