AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0763300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763300 MtrunA17_Chr5g0410171 66.477 704 119 10 1 589 32 733 0.0 871
Msa0763300 MtrunA17_Chr5g0410341 88.427 337 6 2 288 591 411 747 0.0 590
Msa0763300 MtrunA17_Chr5g0410341 87.540 313 15 4 1 289 30 342 0.0 555
Msa0763300 MtrunA17_Chr5g0410201 77.982 327 39 2 296 589 1 327 9.12e-179 508
Msa0763300 MtrunA17_Chr5g0410271 77.301 326 41 2 298 590 2 327 4.80e-176 501
Msa0763300 MtrunA17_Chr6g0457101 41.359 677 292 16 1 590 30 688 2.69e-149 446
Msa0763300 MtrunA17_Chr5g0410461 53.117 369 130 7 260 587 96 462 2.27e-112 343
Msa0763300 MtrunA17_Chr6g0456141 52.819 337 122 5 288 590 51 384 9.65e-112 339
Msa0763300 MtrunA17_Chr6g0456101 36.262 717 311 24 1 583 30 734 5.14e-109 343
Msa0763300 MtrunA17_Chr5g0410371 59.122 296 82 4 329 587 1 294 6.37e-103 313
Msa0763300 MtrunA17_Chr5g0410191 80.368 163 32 0 429 591 32 194 3.96e-84 261
Msa0763300 MtrunA17_Chr5g0410581 31.234 778 332 25 1 588 31 795 1.77e-81 272
Msa0763300 MtrunA17_Chr5g0410291 66.492 191 45 3 110 283 1 189 2.37e-77 244
Msa0763300 MtrunA17_Chr5g0410211 63.918 194 50 4 110 283 1 194 2.80e-71 228
Msa0763300 MtrunA17_Chr5g0410181 78.519 135 29 0 457 591 1 135 4.28e-68 217
Msa0763300 MtrunA17_Chr2g0297701 30.866 554 307 17 90 591 44 573 2.00e-61 213
Msa0763300 MtrunA17_Chr5g0443001 31.336 584 301 21 91 587 31 601 1.62e-57 203
Msa0763300 MtrunA17_Chr2g0297691 27.474 677 377 23 4 587 36 691 4.62e-52 190
Msa0763300 MtrunA17_Chr2g0297681 27.164 670 384 19 4 586 36 688 1.31e-49 183
Msa0763300 MtrunA17_Chr2g0297651 26.746 673 384 21 4 587 38 690 2.41e-49 182
Msa0763300 MtrunA17_Chr3g0100741 26.465 563 315 13 91 570 33 579 3.35e-47 174
Msa0763300 MtrunA17_Chr2g0297491 35.495 293 152 5 329 587 88 377 9.70e-46 166
Msa0763300 MtrunA17_Chr5g0410451 49.697 165 78 1 429 588 71 235 1.03e-45 161
Msa0763300 MtrunA17_Chr5g0410541 52.121 165 73 2 429 588 53 216 7.90e-44 155
Msa0763300 MtrunA17_Chr6g0456151 42.023 257 118 9 1 236 30 276 1.06e-42 155
Msa0763300 MtrunA17_Chr5g0410471 45.909 220 105 5 5 221 105 313 5.07e-41 151
Msa0763300 MtrunA17_Chr2g0297481 34.021 291 155 6 329 587 186 471 2.12e-40 153
Msa0763300 MtrunA17_Chr3g0100301 41.327 196 78 2 418 583 209 397 3.92e-39 148
Msa0763300 MtrunA17_Chr3g0096941 24.913 578 332 15 91 581 33 595 4.24e-39 151
Msa0763300 MtrunA17_Chr2g0297711 26.542 535 301 17 90 587 47 526 7.82e-38 147
Msa0763300 MtrunA17_Chr5g0410411 39.464 261 107 9 1 221 30 279 2.56e-36 138
Msa0763300 MtrunA17_Chr5g0410381 39.837 246 101 8 82 286 3 242 4.98e-36 135
Msa0763300 MtrunA17_Chr5g0410251 65.854 82 28 0 1 82 28 109 1.04e-32 121
Msa0763300 MtrunA17_Chr2g0286601 33.577 274 139 5 329 569 390 653 5.78e-30 125
Msa0763300 MtrunA17_Chr5g0410511 42.949 156 80 1 429 584 32 178 1.30e-29 115
Msa0763300 MtrunA17_Chr5g0410501 45.139 144 73 3 289 428 147 288 1.31e-29 119
Msa0763300 MtrunA17_Chr3g0098481 28.931 318 172 8 316 587 22 331 3.28e-28 115
Msa0763300 MtrunA17_Chr3g0102001 29.276 304 165 6 328 588 440 736 2.14e-26 114
Msa0763300 MtrunA17_Chr2g0286551 31.142 289 161 6 329 583 370 654 1.30e-24 108
Msa0763300 MtrunA17_Chr2g0286561 38.849 139 78 1 431 569 47 178 2.04e-24 101
Msa0763300 MtrunA17_Chr5g0410551 50.476 105 46 3 329 429 1 103 3.44e-23 95.1
Msa0763300 MtrunA17_Chr3g0098301 26.861 309 182 8 316 583 88 393 2.51e-22 99.8
Msa0763300 MtrunA17_Chr1g0211541 25.541 462 250 18 101 508 6 427 3.04e-22 100
Msa0763300 MtrunA17_Chr5g0410561 38.863 211 114 8 32 236 2 203 9.15e-22 94.0
Msa0763300 MtrunA17_Chr5g0439081 36.076 158 94 3 428 580 41 196 3.16e-21 92.4
Msa0763300 MtrunA17_Chr2g0284541 28.391 317 184 7 300 581 322 630 9.69e-20 93.2
Msa0763300 MtrunA17_Chr3g0098531 27.234 235 136 4 385 585 48 281 2.69e-19 89.0
Msa0763300 MtrunA17_Chr2g0284501 28.197 305 173 8 322 590 362 656 6.60e-19 90.9
Msa0763300 MtrunA17_Chr5g0439061 27.740 292 172 5 329 583 437 726 7.56e-19 90.9
Msa0763300 MtrunA17_Chr5g0410441 48.889 90 40 3 344 429 1 88 2.59e-18 80.9
Msa0763300 MtrunA17_Chr3g0100921 40.650 123 72 1 448 569 2 124 8.44e-18 80.5
Msa0763300 MtrunA17_Chr5g0439051 34.591 159 102 2 429 586 50 207 1.13e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763300 AT3G18670.1 35.678 583 284 19 70 591 35 587 4.44e-99 313
Msa0763300 AT3G18670.2 33.599 628 291 19 70 591 35 642 2.02e-96 308
Msa0763300 AT5G04690.3 30.756 582 312 14 81 587 66 631 2.46e-66 228
Msa0763300 AT5G04690.1 31.616 563 312 16 81 587 66 611 1.17e-64 223
Msa0763300 AT5G04690.2 30.201 596 311 15 81 587 66 645 4.06e-64 223
Msa0763300 AT5G04700.1 29.711 589 310 15 90 587 80 655 3.74e-61 214
Msa0763300 AT5G04680.3 28.767 584 316 17 90 587 67 636 9.09e-54 194
Msa0763300 AT5G04680.4 28.523 596 316 17 90 587 67 650 4.02e-52 190
Msa0763300 AT5G04730.1 29.795 537 284 16 138 587 58 588 4.05e-50 183
Msa0763300 AT5G04680.2 29.081 533 270 16 151 587 7 527 1.66e-48 177
Msa0763300 AT5G35810.1 33.993 303 158 6 329 591 35 335 1.66e-47 170
Msa0763300 AT5G04680.1 27.564 624 315 22 90 587 67 679 4.19e-47 176
Msa0763300 AT3G54065.1 39.535 172 68 2 415 550 8 179 1.08e-32 126
Msa0763300 AT5G04700.2 25.815 399 224 12 90 429 80 465 7.29e-24 105
Msa0763300 AT3G54070.1 28.324 173 111 6 66 232 24 189 6.24e-12 66.6
Msa0763300 AT5G35830.1 30.000 160 101 4 78 232 73 226 9.03e-12 66.6

Find 139 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGCAGGATATTT+AGG 0.127030 5_2:+22462814 Msa0763300:CDS
CCAAAGAATTCAAGAGTTTA+AGG 0.157617 5_2:+22462537 Msa0763300:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_2:+22463822 Msa0763300:CDS
CCTTAAACTCTTGAATTCTT+TGG 0.238324 5_2:-22462537 None:intergenic
TAAAGAAGCCTGGAATAAAT+TGG 0.241875 5_2:+22460011 Msa0763300:CDS
ATACATGATGCAACTGTAAA+TGG 0.242921 5_2:+22462742 Msa0763300:CDS
TTAGAACGCGCACCAATTTC+AGG 0.251761 5_2:-22459883 None:intergenic
CTTCGCTATATTCGTGTTTC+CGG 0.254247 5_2:-22460611 None:intergenic
AATATATTCCACATCCTCTA+TGG 0.260429 5_2:+22460450 Msa0763300:CDS
GTGACCTCTATTCCTGAAAT+TGG 0.292763 5_2:+22459871 Msa0763300:CDS
TATATACCTTGCTCAATATC+TGG 0.305429 5_2:-22460066 None:intergenic
TGCACTTGGCAGGATATTTA+GGG 0.308043 5_2:+22462815 Msa0763300:CDS
TTTCCAAGTGGTAGTGGATA+TGG 0.311953 5_2:+22461044 Msa0763300:CDS
ACTTCGGTCCTTCTCTTCAT+TGG 0.319322 5_2:+22463682 Msa0763300:CDS
AATTGTATCCATCAGGAATA+AGG 0.321064 5_2:+22462455 Msa0763300:intron
CTTCACGTTGCGGTAGTTGC+TGG 0.322177 5_2:+22460484 Msa0763300:CDS
CTAAGACTGAATATGAGATT+TGG 0.338368 5_2:+22459902 Msa0763300:CDS
AGGGTAATCCTGACCTCTTA+TGG 0.352153 5_2:+22462647 Msa0763300:CDS
CGAGGAAATTGTGAAGAAAT+TGG 0.372095 5_2:+22460510 Msa0763300:CDS
ATGCAAACTCGTTTATTAAG+AGG 0.378242 5_2:+22460416 Msa0763300:CDS
AACAGGGATTTCACCATCAT+TGG 0.379563 5_2:-22460692 None:intergenic
TGTTCTTCTTGCTGCTGCTA+AGG 0.379583 5_2:+22460711 Msa0763300:CDS
AGTTGCACCCAATTTATTCC+AGG 0.399506 5_2:-22460019 None:intergenic
GCTGCAGCTTTCACTGTCCC+TGG 0.408383 5_2:+22463562 Msa0763300:CDS
TTAGCAGCAGCAAGAAGAAC+AGG 0.410668 5_2:-22460709 None:intergenic
TAGAAACCACAGAGAAGAAA+AGG 0.416389 5_2:-22463780 None:intergenic
TTCCAAGTGGTAGTGGATAT+GGG 0.416844 5_2:+22461045 Msa0763300:CDS
AAATGCCGTGTAGACGCATT+TGG 0.419337 5_2:+22462781 Msa0763300:CDS
AATTCCATGTTGCACTTGGC+AGG 0.419647 5_2:+22462805 Msa0763300:CDS
ATCAGAACTTAGAGAGGCTT+CGG 0.421195 5_2:+22462561 Msa0763300:CDS
GGGTAATCCTGACCTCTTAT+GGG 0.423361 5_2:+22462648 Msa0763300:CDS
CTAATATGAGTAAGATTCTC+TGG 0.424630 5_2:-22459973 None:intergenic
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_2:+22463823 Msa0763300:CDS
CATTGGTCTTCATAGATAAC+AGG 0.427879 5_2:-22460675 None:intergenic
ACCTTAGTGGCAATGACTTA+AGG 0.429666 5_2:-22463738 None:intergenic
AGATGCAAAGAGAAATTCTA+TGG 0.430747 5_2:+22462878 Msa0763300:CDS
TTCACGTTGCGGTAGTTGCT+GGG 0.432176 5_2:+22460485 Msa0763300:CDS
TCTCTTTGCATCTGCATAGC+AGG 0.438079 5_2:-22462868 None:intergenic
GAGATTTGGAACAGGAAGAA+TGG 0.441267 5_2:+22459916 Msa0763300:CDS
CCACAAATCGCACTTTGAAT+CGG 0.442750 5_2:+22460977 Msa0763300:CDS
TCTGTGTTTCCAAGTGGTAG+TGG 0.443413 5_2:+22461038 Msa0763300:CDS
CTGAATATGAGATTTGGAAC+AGG 0.444534 5_2:+22459908 Msa0763300:CDS
GTTCTTCTTGCTGCTGCTAA+GGG 0.445513 5_2:+22460712 Msa0763300:CDS
GACGGAACTAGAACGATAAC+AGG 0.451356 5_2:-22463889 None:intergenic
CGATTCAAAGTGCGATTTGT+GGG 0.457581 5_2:-22460976 None:intergenic
TATAGCGAAGTGTATGACTA+TGG 0.458675 5_2:+22460624 Msa0763300:CDS
TCCTTAAGTCATTGCCACTA+AGG 0.460081 5_2:+22463737 Msa0763300:CDS
TCTTGTGGGACATGGTCTGT+GGG 0.464135 5_2:+22459843 Msa0763300:CDS
TCAATGGCCCATAAGAGGTC+AGG 0.465739 5_2:-22462655 None:intergenic
TTTCAGCGTAACGAGCCGTT+AGG 0.467061 5_2:-22463708 None:intergenic
GTTTATAGATGCAATGAGAA+AGG 0.467103 5_2:+22462627 Msa0763300:CDS
CTTGTTAGAAACTATCTTGT+GGG 0.467922 5_2:+22459829 None:intergenic
ATGCGTGCCAATGCGTATAA+TGG 0.471182 5_2:-22461011 None:intergenic
TTGTGGGCAAGAGGCATTTG+AGG 0.474333 5_2:-22460960 None:intergenic
TGTGCAGCGATTTATATTGA+AGG 0.474499 5_2:-22460366 None:intergenic
TTCATATTGCTAAAGAAGCC+TGG 0.477292 5_2:+22460001 Msa0763300:CDS
AAAGAAGCCTGGAATAAATT+GGG 0.481257 5_2:+22460012 Msa0763300:CDS
AGCTGGTTCATTTACTCTTG+TGG 0.482801 5_2:+22463513 Msa0763300:CDS
AGATTTGGAACAGGAAGAAT+GGG 0.485550 5_2:+22459917 Msa0763300:CDS
TCAGCTCAGCAACAAGAGCT+AGG 0.486371 5_2:-22460588 None:intergenic
CATAGCAAGTGAAGCACAGA+AGG 0.486804 5_2:-22463812 None:intergenic
ATCTTGTGGGACATGGTCTG+TGG 0.486835 5_2:+22459842 Msa0763300:CDS
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5_2:+22460520 Msa0763300:CDS
TTGCATCTGCATAGCAGGAC+CGG 0.495069 5_2:-22462863 None:intergenic
ATATATTCCACATCCTCTAT+GGG 0.496055 5_2:+22460451 Msa0763300:CDS
TTGTCTTGATTGTTTCCACC+AGG 0.496117 5_2:-22463580 None:intergenic
TTGTACACCGTTGGAAGACC+TGG 0.502955 5_2:+22460765 Msa0763300:CDS
TTTATAGATGCAATGAGAAA+GGG 0.503030 5_2:+22462628 Msa0763300:CDS
ATCATGTATGAGTTCGAAAA+CGG 0.503307 5_2:-22462728 None:intergenic
TGCGATAATTATCATCGGCC+AGG 0.509460 5_2:-22460783 None:intergenic
TGGCAATTCCATGTTGCACT+TGG 0.511014 5_2:+22462801 Msa0763300:CDS
TCTTTACCGTTGTACACCGT+TGG 0.515694 5_2:+22460756 Msa0763300:CDS
TCTGATCTTGATCGTAGATC+CGG 0.515841 5_2:+22462844 Msa0763300:CDS
CCGATTCAAAGTGCGATTTG+TGG 0.519858 5_2:-22460977 None:intergenic
CGCACCAATTTCAGGAATAG+AGG 0.521001 5_2:-22459875 None:intergenic
CACAAGGAGCTAGTGAAAGC+TGG 0.525545 5_2:+22463469 Msa0763300:intron
GCTCTTGTTGCTGAGCTGAC+CGG 0.526277 5_2:+22460592 Msa0763300:CDS
TGCAAACTCGTTTATTAAGA+GGG 0.527286 5_2:+22460417 Msa0763300:CDS
TGTGATGTCGTGCAAGAACA+AGG 0.535047 5_2:-22463611 None:intergenic
GAGGCATTTGAGGAAATCGT+TGG 0.537554 5_2:-22460950 None:intergenic
GGTCCTCCCCATAGAGGATG+TGG 0.539677 5_2:-22460458 None:intergenic
AAGAGAAATTCTATGGTTCA+AGG 0.541072 5_2:+22462885 Msa0763300:CDS
TGTGCAACCATTATACGCAT+TGG 0.543058 5_2:+22461004 Msa0763300:CDS
AGTGCGAAAAGTAACCTTAG+TGG 0.548121 5_2:-22463751 None:intergenic
ATGTTACAAGCAGCAAAGCA+TGG 0.552695 5_2:+22462595 Msa0763300:CDS
AACCCATATCCACTACCACT+TGG 0.557493 5_2:-22461047 None:intergenic
TCTTGTTAGAAACTATCTTG+TGG 0.559427 5_2:+22459828 None:intergenic
AGAAACTATCTTGTGGGACA+TGG 0.562860 5_2:+22459835 None:intergenic
AAATGGGCAAAAGATACAGC+TGG 0.563052 5_2:+22463496 Msa0763300:CDS
AGAAACCACAGAGAAGAAAA+GGG 0.563826 5_2:-22463779 None:intergenic
ACCTTGCTCAATATCTGGAT+CGG 0.564323 5_2:-22460061 None:intergenic
GCTTTAATTTGCAGGTGTGG+TGG 0.564757 5_2:+22460333 Msa0763300:intron
ACTTGAAAATCTCAAGGAAG+AGG 0.567742 5_2:-22463921 None:intergenic
TAAGGAATCAGAACTTAGAG+AGG 0.568613 5_2:+22462555 Msa0763300:CDS
GCCGATGATAATTATCGCAA+TGG 0.574637 5_2:+22460787 Msa0763300:CDS
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5_2:+22460521 Msa0763300:CDS
CAGCTCAGCAACAAGAGCTA+GGG 0.580236 5_2:-22460587 None:intergenic
AGGAAGAGGCGCAACTGTGA+CGG 0.582572 5_2:-22463907 None:intergenic
TTATCTATGAAGACCAATGA+TGG 0.582929 5_2:+22460679 Msa0763300:CDS
TGTTACAAGCAGCAAAGCAT+GGG 0.588268 5_2:+22462596 Msa0763300:CDS
TGCGGTAGTTGCTGGGCACG+AGG 0.589759 5_2:+22460492 Msa0763300:CDS
TAAGAAAATAACACGGTCAG+AGG 0.590331 5_2:+22460651 Msa0763300:CDS
TCTCTTCATTGGAATCCTAA+CGG 0.591072 5_2:+22463693 Msa0763300:CDS
CTGTAGACTTGAAAATCTCA+AGG 0.594097 5_2:-22463927 None:intergenic
GCAGCTTTCACTGTCCCTGG+TGG 0.601445 5_2:+22463565 Msa0763300:CDS
AAGTGCGATTTGTGGGCAAG+AGG 0.604929 5_2:-22460969 None:intergenic
AGTATATTGAGAGCGGTGAG+TGG 0.609550 5_2:+22460389 Msa0763300:CDS
ACCATTGCGATAATTATCAT+CGG 0.609954 5_2:-22460788 None:intergenic
TAGAACGATAACAGGAACAC+TGG 0.611619 5_2:-22463881 None:intergenic
AACTACCGCAACGTGAAGAA+CGG 0.612033 5_2:-22460479 None:intergenic
AATTGCCAAATGCGTCTACA+CGG 0.612652 5_2:-22462786 None:intergenic
TTAGGATTCCAATGAAGAGA+AGG 0.614556 5_2:-22463690 None:intergenic
GCCGATCCAGATATTGAGCA+AGG 0.614842 5_2:+22460060 Msa0763300:CDS
ATGCCTTCTGTGTTTCCAAG+TGG 0.615562 5_2:+22461032 Msa0763300:CDS
TGCAACTGTAAATGGACGGA+AGG 0.618113 5_2:+22462750 Msa0763300:CDS
CTTGTGGGACATGGTCTGTG+GGG 0.619674 5_2:+22459844 Msa0763300:CDS
CTACCACTTGGAAACACAGA+AGG 0.622603 5_2:-22461035 None:intergenic
AAGAACGGTCCTCCCCATAG+AGG 0.622685 5_2:-22460464 None:intergenic
AATTGTGAAGAAATTGGTGA+AGG 0.625256 5_2:+22460516 Msa0763300:CDS
ATATCCTGCCAAGTGCAACA+TGG 0.627952 5_2:-22462809 None:intergenic
GGTGGAAACAATCAAGACAA+TGG 0.629811 5_2:+22463583 Msa0763300:CDS
ATGATGCAACTGTAAATGGA+CGG 0.638038 5_2:+22462746 Msa0763300:CDS
CATATCATTCAACTAACATG+TGG 0.643061 5_2:+22459949 Msa0763300:CDS
TGTCTTGATTGTTTCCACCA+GGG 0.652150 5_2:-22463579 None:intergenic
GAGGACCGTTCTTCACGTTG+CGG 0.655029 5_2:+22460474 Msa0763300:CDS
GTGATGTCGTGCAAGAACAA+GGG 0.659099 5_2:-22463610 None:intergenic
ATTCCACATCCTCTATGGGG+AGG 0.660094 5_2:+22460455 Msa0763300:CDS
TAGCAGCAGCAAGAAGAACA+GGG 0.665135 5_2:-22460708 None:intergenic
TTGGAACAGGAAGAATGGGA+AGG 0.668429 5_2:+22459921 Msa0763300:CDS
TATTTCAAGAGCTACACGGT+AGG 0.669157 5_2:-22462500 None:intergenic
GTGAAAATGAAAGACAATCG+AGG 0.669964 5_2:+22460556 Msa0763300:CDS
TCATCGGCCAGGTCTTCCAA+CGG 0.671668 5_2:-22460772 None:intergenic
CTACGATCAAGATCAGAGGA+AGG 0.678354 5_2:-22462838 None:intergenic
CTGCACAAGTATATTGAGAG+CGG 0.680709 5_2:+22460382 Msa0763300:CDS
GGATCTACGATCAAGATCAG+AGG 0.680818 5_2:-22462842 None:intergenic
TCAATATTTCAAGAGCTACA+CGG 0.684421 5_2:-22462504 None:intergenic
GGTCTTCCAACGGTGTACAA+CGG 0.687225 5_2:-22460762 None:intergenic
TATATTCCACATCCTCTATG+GGG 0.688060 5_2:+22460452 Msa0763300:CDS
TGGTATATAAGAAAATAACA+CGG 0.754492 5_2:+22460644 Msa0763300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTAAATACTTATAATATT+AGG + chr5_2:22460247-22460266 Msa0763300:intron 10.0%
!! CTTAAATACTTATAATATTA+GGG + chr5_2:22460248-22460267 Msa0763300:intron 10.0%
!! ACTTTATAAAAGAAATTTAA+AGG + chr5_2:22461303-22461322 Msa0763300:intron 10.0%
!!! ACTGAATTTTAATTAAATTG+AGG + chr5_2:22460861-22460880 Msa0763300:intron 15.0%
!!! CTGAATTTTAATTAAATTGA+GGG + chr5_2:22460862-22460881 Msa0763300:intron 15.0%
!! ATTTAAAGGTGATTTATAAA+AGG + chr5_2:22461317-22461336 Msa0763300:intron 15.0%
!! TTTAAAGGTGATTTATAAAA+GGG + chr5_2:22461318-22461337 Msa0763300:intron 15.0%
!! TACTTCCAATAATATATTAA+AGG + chr5_2:22461432-22461451 Msa0763300:intron 15.0%
!! AAACTCCTTTAATATATTAT+TGG - chr5_2:22461440-22461459 None:intergenic 15.0%
!!! TTACACATTTTTTTTTTTTC+AGG + chr5_2:22462248-22462267 Msa0763300:intron 15.0%
!! TAATTAATTAATCACAAAGA+GGG - chr5_2:22462416-22462435 None:intergenic 15.0%
!! TTAATTAATTAATCACAAAG+AGG - chr5_2:22462417-22462436 None:intergenic 15.0%
!!! AAAAACTAAATTTGAAATTC+TGG + chr5_2:22463174-22463193 Msa0763300:intron 15.0%
!! TACACATTAATCTATTCTTT+GGG + chr5_2:22460107-22460126 Msa0763300:intron 20.0%
!! AACTATGTCTAATATGTATA+GGG - chr5_2:22460149-22460168 None:intergenic 20.0%
!! AAACTATGTCTAATATGTAT+AGG - chr5_2:22460150-22460169 None:intergenic 20.0%
!! TAGTTTCTAAATGTATTGAA+AGG + chr5_2:22460164-22460183 Msa0763300:intron 20.0%
!!! CATTTATTTTCCTTACTAAT+TGG - chr5_2:22460275-22460294 None:intergenic 20.0%
!! CAATTAGTAAGGAAAATAAA+TGG + chr5_2:22460273-22460292 Msa0763300:intron 20.0%
!! TGGTATATAAGAAAATAACA+CGG + chr5_2:22460644-22460663 Msa0763300:CDS 20.0%
!!! TTGTTAATCCTTGTTTAAAT+AGG + chr5_2:22462338-22462357 Msa0763300:intron 20.0%
!! CTAATATACCTATTTAAACA+AGG - chr5_2:22462349-22462368 None:intergenic 20.0%
!! AATTAATTAATCACAAAGAG+GGG - chr5_2:22462415-22462434 None:intergenic 20.0%
!! ATACATGACATTTAAATAAG+TGG + chr5_2:22463237-22463256 Msa0763300:intron 20.0%
!! ATGAATAAGATAATAATGTG+TGG - chr5_2:22463295-22463314 None:intergenic 20.0%
! GTACACATTAATCTATTCTT+TGG + chr5_2:22460106-22460125 Msa0763300:intron 25.0%
! TCGATTCAATATTGTATCTT+AGG + chr5_2:22460909-22460928 Msa0763300:intron 25.0%
! AATTTGAAAAGTAAGCGAAA+CGG - chr5_2:22461134-22461153 None:intergenic 25.0%
!!! TTTCGCTTACTTTTCAAATT+GGG + chr5_2:22461134-22461153 Msa0763300:intron 25.0%
! TGCAAACTTATAATGTTACA+CGG + chr5_2:22461193-22461212 Msa0763300:intron 25.0%
!! GTTTGTATTTTATAAGACAC+CGG - chr5_2:22461353-22461372 None:intergenic 25.0%
! AATGAATACTATATGTGTAG+TGG - chr5_2:22461402-22461421 None:intergenic 25.0%
! AGACCAACTTTACAAAATTA+AGG + chr5_2:22461596-22461615 Msa0763300:intron 25.0%
!! ACTCCTTAATTTTGTAAAGT+TGG - chr5_2:22461602-22461621 None:intergenic 25.0%
! GAGTAAATAATGAATGAGAT+TGG + chr5_2:22461664-22461683 Msa0763300:intron 25.0%
!! GTTTTTCTACAATATGCAAA+TGG + chr5_2:22461941-22461960 Msa0763300:intron 25.0%
! CTGAAGATTATTAATCTTCT+TGG + chr5_2:22461969-22461988 Msa0763300:intron 25.0%
! ATCAACACACATATATAACA+GGG - chr5_2:22462214-22462233 None:intergenic 25.0%
! TATCAACACACATATATAAC+AGG - chr5_2:22462215-22462234 None:intergenic 25.0%
! GAATGATTGTACTTACAATA+AGG - chr5_2:22462390-22462409 None:intergenic 25.0%
!! TATATTTTCCTTATTCCTGA+TGG - chr5_2:22462466-22462485 None:intergenic 25.0%
! TTTATAGATGCAATGAGAAA+GGG + chr5_2:22462628-22462647 Msa0763300:CDS 25.0%
! GCCATTGATAAAAATAAAAG+AGG + chr5_2:22462670-22462689 Msa0763300:CDS 25.0%
!!! GCCTCTTTTATTTTTATCAA+TGG - chr5_2:22462674-22462693 None:intergenic 25.0%
! AATGTCATGTATCTCAAAAT+TGG - chr5_2:22463229-22463248 None:intergenic 25.0%
!! CTTATTGTGAAATTTTGTGT+AGG + chr5_2:22463363-22463382 Msa0763300:intron 25.0%
CTAAGACTGAATATGAGATT+TGG + chr5_2:22459902-22459921 Msa0763300:CDS 30.0%
CATATCATTCAACTAACATG+TGG + chr5_2:22459949-22459968 Msa0763300:CDS 30.0%
CTAATATGAGTAAGATTCTC+TGG - chr5_2:22459976-22459995 None:intergenic 30.0%
TAAAGAAGCCTGGAATAAAT+TGG + chr5_2:22460011-22460030 Msa0763300:CDS 30.0%
AAAGAAGCCTGGAATAAATT+GGG + chr5_2:22460012-22460031 Msa0763300:CDS 30.0%
TATATACCTTGCTCAATATC+TGG - chr5_2:22460069-22460088 None:intergenic 30.0%
!! TTTTAAGTGTCTTTTGTGAG+TGG + chr5_2:22460197-22460216 Msa0763300:intron 30.0%
! TTTAAGTGTCTTTTGTGAGT+GGG + chr5_2:22460198-22460217 Msa0763300:intron 30.0%
ATATTAGGGTCCAATTAGTA+AGG + chr5_2:22460262-22460281 Msa0763300:intron 30.0%
!! ACATACATGCTTTAATTTGC+AGG + chr5_2:22460325-22460344 Msa0763300:intron 30.0%
ATGCAAACTCGTTTATTAAG+AGG + chr5_2:22460416-22460435 Msa0763300:CDS 30.0%
TGCAAACTCGTTTATTAAGA+GGG + chr5_2:22460417-22460436 Msa0763300:CDS 30.0%
AATATATTCCACATCCTCTA+TGG + chr5_2:22460450-22460469 Msa0763300:CDS 30.0%
ATATATTCCACATCCTCTAT+GGG + chr5_2:22460451-22460470 Msa0763300:CDS 30.0%
AATTGTGAAGAAATTGGTGA+AGG + chr5_2:22460516-22460535 Msa0763300:CDS 30.0%
TTATCTATGAAGACCAATGA+TGG + chr5_2:22460679-22460698 Msa0763300:CDS 30.0%
ACCATTGCGATAATTATCAT+CGG - chr5_2:22460791-22460810 None:intergenic 30.0%
TGTATCACTGCAGAAATATT+TGG + chr5_2:22460829-22460848 Msa0763300:intron 30.0%
TCAATATTGTATCTTAGGTG+TGG + chr5_2:22460914-22460933 Msa0763300:intron 30.0%
!! GTTTCGCTTACTTTTCAAAT+TGG + chr5_2:22461133-22461152 Msa0763300:intron 30.0%
TTGGGTCATCTTAAAATTCT+TGG + chr5_2:22461152-22461171 Msa0763300:intron 30.0%
TATAAAAGGGAAATGCTAAC+CGG + chr5_2:22461331-22461350 Msa0763300:intron 30.0%
GTGGAGATGTTAAATTATGT+TGG - chr5_2:22461383-22461402 None:intergenic 30.0%
! AGAGTTTTACATGATCTGTT+TGG + chr5_2:22461473-22461492 Msa0763300:intron 30.0%
TACATGATCTGTTTGGAAAT+TGG + chr5_2:22461480-22461499 Msa0763300:intron 30.0%
! AGTGAAGTTTGATGAGTTTT+TGG - chr5_2:22461553-22461572 None:intergenic 30.0%
!! GAGTATCGTTCCAATTTTAT+TGG + chr5_2:22461618-22461637 Msa0763300:intron 30.0%
GGTAATCTCAAAACTAAAAG+CGG - chr5_2:22461773-22461792 None:intergenic 30.0%
!! AGAGAAGTGCATGAATTTTA+CGG + chr5_2:22461797-22461816 Msa0763300:intron 30.0%
!!! TTTGTGTTGTTTTTCCTCTT+TGG - chr5_2:22461849-22461868 None:intergenic 30.0%
!! AAGCTCTAGAAAGAAGAATT+AGG - chr5_2:22461902-22461921 None:intergenic 30.0%
!! ATCTTCTTGGTTGTTTCTTT+AGG + chr5_2:22461982-22462001 Msa0763300:intron 30.0%
! TCACATGTCATTTCAGAATT+CGG + chr5_2:22462289-22462308 Msa0763300:intron 30.0%
! TTATTCCTGATGGATACAAT+TGG - chr5_2:22462456-22462475 None:intergenic 30.0%
AATTGTATCCATCAGGAATA+AGG + chr5_2:22462455-22462474 Msa0763300:intron 30.0%
TCAATATTTCAAGAGCTACA+CGG - chr5_2:22462507-22462526 None:intergenic 30.0%
CCTTAAACTCTTGAATTCTT+TGG - chr5_2:22462540-22462559 None:intergenic 30.0%
CCAAAGAATTCAAGAGTTTA+AGG + chr5_2:22462537-22462556 Msa0763300:CDS 30.0%
GTTTATAGATGCAATGAGAA+AGG + chr5_2:22462627-22462646 Msa0763300:CDS 30.0%
ATCATGTATGAGTTCGAAAA+CGG - chr5_2:22462731-22462750 None:intergenic 30.0%
ATACATGATGCAACTGTAAA+TGG + chr5_2:22462742-22462761 Msa0763300:CDS 30.0%
AGATGCAAAGAGAAATTCTA+TGG + chr5_2:22462878-22462897 Msa0763300:CDS 30.0%
AAGAGAAATTCTATGGTTCA+AGG + chr5_2:22462885-22462904 Msa0763300:CDS 30.0%
GTTAGTTGTGAAGTTGTTAT+AGG - chr5_2:22463151-22463170 None:intergenic 30.0%
TTTCACAATAAGTTATAGCG+CGG - chr5_2:22463355-22463374 None:intergenic 30.0%
!!! TTTTTTGCTTCCTTACACTT+GGG - chr5_2:22463409-22463428 None:intergenic 30.0%
!!! ATTTTTTGCTTCCTTACACT+TGG - chr5_2:22463410-22463429 None:intergenic 30.0%
! TCTTTTCACTTCTTCAACTT+CGG + chr5_2:22463666-22463685 Msa0763300:CDS 30.0%
! CTGAATATGAGATTTGGAAC+AGG + chr5_2:22459908-22459927 Msa0763300:CDS 35.0%
! AGATTTGGAACAGGAAGAAT+GGG + chr5_2:22459917-22459936 Msa0763300:CDS 35.0%
TTCATATTGCTAAAGAAGCC+TGG + chr5_2:22460001-22460020 Msa0763300:CDS 35.0%
TGTGCAGCGATTTATATTGA+AGG - chr5_2:22460369-22460388 None:intergenic 35.0%
TATATTCCACATCCTCTATG+GGG + chr5_2:22460452-22460471 Msa0763300:CDS 35.0%
CGAGGAAATTGTGAAGAAAT+TGG + chr5_2:22460510-22460529 Msa0763300:CDS 35.0%
TGAAGAAATTGGTGAAGGAA+GGG + chr5_2:22460521-22460540 Msa0763300:CDS 35.0%
GTGAAAATGAAAGACAATCG+AGG + chr5_2:22460556-22460575 Msa0763300:CDS 35.0%
TATAGCGAAGTGTATGACTA+TGG + chr5_2:22460624-22460643 Msa0763300:CDS 35.0%
TAAGAAAATAACACGGTCAG+AGG + chr5_2:22460651-22460670 Msa0763300:CDS 35.0%
!! CATTGGTCTTCATAGATAAC+AGG - chr5_2:22460678-22460697 None:intergenic 35.0%
AATTCATGCACTTCTCTTTC+AGG - chr5_2:22461794-22461813 None:intergenic 35.0%
!! GAGAAGTGCATGAATTTTAC+GGG + chr5_2:22461798-22461817 Msa0763300:intron 35.0%
TCTTGCAAATATTGCCAAAG+AGG + chr5_2:22461832-22461851 Msa0763300:intron 35.0%
!! TCTTGGTTGTTTCTTTAGGA+AGG + chr5_2:22461986-22462005 Msa0763300:intron 35.0%
! GTTTCTTTAGGAAGGTTATG+TGG + chr5_2:22461994-22462013 Msa0763300:intron 35.0%
AAGATCACAGATCACAACAA+GGG - chr5_2:22462116-22462135 None:intergenic 35.0%
AAAGATCACAGATCACAACA+AGG - chr5_2:22462117-22462136 None:intergenic 35.0%
TCGGTACTATTAAAGTTCTC+TGG + chr5_2:22462308-22462327 Msa0763300:intron 35.0%
TAATTAATCACAAAGAGGGG+AGG - chr5_2:22462412-22462431 None:intergenic 35.0%
TAAGGAATCAGAACTTAGAG+AGG + chr5_2:22462555-22462574 Msa0763300:CDS 35.0%
! TTTTATCAATGGCCCATAAG+AGG - chr5_2:22462663-22462682 None:intergenic 35.0%
ATGATGCAACTGTAAATGGA+CGG + chr5_2:22462746-22462765 Msa0763300:CDS 35.0%
GCTTATATGTTGGAACAAAG+AGG + chr5_2:22462964-22462983 Msa0763300:intron 35.0%
GAGAAGAGATTAGAGAGTTT+AGG + chr5_2:22463025-22463044 Msa0763300:intron 35.0%
! TTTTTGCTTCCTTACACTTG+GGG - chr5_2:22463408-22463427 None:intergenic 35.0%
TAGTGAAAGCTGGAGAAAAA+TGG + chr5_2:22463479-22463498 Msa0763300:CDS 35.0%
AGTGAAAGCTGGAGAAAAAT+GGG + chr5_2:22463480-22463499 Msa0763300:CDS 35.0%
TTAGGATTCCAATGAAGAGA+AGG - chr5_2:22463693-22463712 None:intergenic 35.0%
TCTCTTCATTGGAATCCTAA+CGG + chr5_2:22463693-22463712 Msa0763300:CDS 35.0%
AGAAACCACAGAGAAGAAAA+GGG - chr5_2:22463782-22463801 None:intergenic 35.0%
TAGAAACCACAGAGAAGAAA+AGG - chr5_2:22463783-22463802 None:intergenic 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG + chr5_2:22463822-22463841 Msa0763300:CDS 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG + chr5_2:22463823-22463842 Msa0763300:CDS 35.0%
ACTTGAAAATCTCAAGGAAG+AGG - chr5_2:22463924-22463943 None:intergenic 35.0%
CTGTAGACTTGAAAATCTCA+AGG - chr5_2:22463930-22463949 None:intergenic 35.0%
GTGACCTCTATTCCTGAAAT+TGG + chr5_2:22459871-22459890 Msa0763300:CDS 40.0%
! GAGATTTGGAACAGGAAGAA+TGG + chr5_2:22459916-22459935 Msa0763300:CDS 40.0%
AGTTGCACCCAATTTATTCC+AGG - chr5_2:22460022-22460041 None:intergenic 40.0%
ACCTTGCTCAATATCTGGAT+CGG - chr5_2:22460064-22460083 None:intergenic 40.0%
!! CATGCTTTAATTTGCAGGTG+TGG + chr5_2:22460330-22460349 Msa0763300:intron 40.0%
CTGCACAAGTATATTGAGAG+CGG + chr5_2:22460382-22460401 Msa0763300:CDS 40.0%
GTGAAGAAATTGGTGAAGGA+AGG + chr5_2:22460520-22460539 Msa0763300:CDS 40.0%
CTTCGCTATATTCGTGTTTC+CGG - chr5_2:22460614-22460633 None:intergenic 40.0%
AACAGGGATTTCACCATCAT+TGG - chr5_2:22460695-22460714 None:intergenic 40.0%
GCCGATGATAATTATCGCAA+TGG + chr5_2:22460787-22460806 Msa0763300:CDS 40.0%
! CTGCAGAAATATTTGGTTCG+TGG + chr5_2:22460836-22460855 Msa0763300:intron 40.0%
CGATTCAAAGTGCGATTTGT+GGG - chr5_2:22460979-22460998 None:intergenic 40.0%
CCACAAATCGCACTTTGAAT+CGG + chr5_2:22460977-22460996 Msa0763300:CDS 40.0%
TGTGCAACCATTATACGCAT+TGG + chr5_2:22461004-22461023 Msa0763300:CDS 40.0%
!! TTTCCAAGTGGTAGTGGATA+TGG + chr5_2:22461044-22461063 Msa0763300:CDS 40.0%
!! TTCCAAGTGGTAGTGGATAT+GGG + chr5_2:22461045-22461064 Msa0763300:CDS 40.0%
TCGGGGACATCCAATAAAAT+TGG - chr5_2:22461631-22461650 None:intergenic 40.0%
! ATTTTATTGGATGTCCCCGA+AGG + chr5_2:22461631-22461650 Msa0763300:intron 40.0%
! TTTTATTGGATGTCCCCGAA+GGG + chr5_2:22461632-22461651 Msa0763300:intron 40.0%
TTACTCCTCAATTGTCCCTT+CGG - chr5_2:22461650-22461669 None:intergenic 40.0%
!! AAGCGGAAGTAGATTAGTCT+TGG - chr5_2:22461756-22461775 None:intergenic 40.0%
CAACACAAAGCTTCTTTCGT+AGG + chr5_2:22461860-22461879 Msa0763300:intron 40.0%
CAAAGCTTCTTTCGTAGGTA+TGG + chr5_2:22461865-22461884 Msa0763300:intron 40.0%
! CTTTAGGAAGGTTATGTGGA+CGG + chr5_2:22461998-22462017 Msa0763300:intron 40.0%
TTTATCGCCAGTAAAGCAGT+TGG + chr5_2:22462029-22462048 Msa0763300:intron 40.0%
TTATCGCCAGTAAAGCAGTT+GGG + chr5_2:22462030-22462049 Msa0763300:intron 40.0%
AACTTACCCAACTGCTTTAC+TGG - chr5_2:22462039-22462058 None:intergenic 40.0%
TCTGGATTACAAGACGTATC+GGG - chr5_2:22462164-22462183 None:intergenic 40.0%
GTCTGGATTACAAGACGTAT+CGG - chr5_2:22462165-22462184 None:intergenic 40.0%
TCTTGTAATCCAGACCCTAA+GGG + chr5_2:22462170-22462189 Msa0763300:intron 40.0%
GCTTTGTATTCACACCCTTA+GGG - chr5_2:22462187-22462206 None:intergenic 40.0%
CACACATATATAACAGGGAC+TGG - chr5_2:22462209-22462228 None:intergenic 40.0%
! TCCTGATGGATACAATTGGA+GGG - chr5_2:22462452-22462471 None:intergenic 40.0%
! TTCCTGATGGATACAATTGG+AGG - chr5_2:22462453-22462472 None:intergenic 40.0%
TATTTCAAGAGCTACACGGT+AGG - chr5_2:22462503-22462522 None:intergenic 40.0%
ATCAGAACTTAGAGAGGCTT+CGG + chr5_2:22462561-22462580 Msa0763300:CDS 40.0%
ATGTTACAAGCAGCAAAGCA+TGG + chr5_2:22462595-22462614 Msa0763300:CDS 40.0%
TGTTACAAGCAGCAAAGCAT+GGG + chr5_2:22462596-22462615 Msa0763300:CDS 40.0%
! GTTCGAAAACGGCTTTTCTA+CGG - chr5_2:22462720-22462739 None:intergenic 40.0%
AATTGCCAAATGCGTCTACA+CGG - chr5_2:22462789-22462808 None:intergenic 40.0%
TTGCACTTGGCAGGATATTT+AGG + chr5_2:22462814-22462833 Msa0763300:CDS 40.0%
TGCACTTGGCAGGATATTTA+GGG + chr5_2:22462815-22462834 Msa0763300:CDS 40.0%
TCTGATCTTGATCGTAGATC+CGG + chr5_2:22462844-22462863 Msa0763300:CDS 40.0%
CATGCATGCAGCTTATATGT+TGG + chr5_2:22462954-22462973 Msa0763300:intron 40.0%
TATAGCGCGGTTCAAATTCA+TGG - chr5_2:22463342-22463361 None:intergenic 40.0%
! GTGAAATTTTGTGTAGGCAG+TGG + chr5_2:22463369-22463388 Msa0763300:intron 40.0%
! AAATTTTGTGTAGGCAGTGG+AGG + chr5_2:22463372-22463391 Msa0763300:intron 40.0%
CTTTCGGTAAATATCTCACG+AGG - chr5_2:22463448-22463467 None:intergenic 40.0%
GATATTTACCGAAAGCCACA+AGG + chr5_2:22463453-22463472 Msa0763300:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG + chr5_2:22463496-22463515 Msa0763300:CDS 40.0%
! AGCTGGTTCATTTACTCTTG+TGG + chr5_2:22463513-22463532 Msa0763300:CDS 40.0%
TGTCTTGATTGTTTCCACCA+GGG - chr5_2:22463582-22463601 None:intergenic 40.0%
TTGTCTTGATTGTTTCCACC+AGG - chr5_2:22463583-22463602 None:intergenic 40.0%
GGTGGAAACAATCAAGACAA+TGG + chr5_2:22463583-22463602 Msa0763300:CDS 40.0%
TCCTTAAGTCATTGCCACTA+AGG + chr5_2:22463737-22463756 Msa0763300:CDS 40.0%
ACCTTAGTGGCAATGACTTA+AGG - chr5_2:22463741-22463760 None:intergenic 40.0%
AGTGCGAAAAGTAACCTTAG+TGG - chr5_2:22463754-22463773 None:intergenic 40.0%
TAGAACGATAACAGGAACAC+TGG - chr5_2:22463884-22463903 None:intergenic 40.0%
CGCACCAATTTCAGGAATAG+AGG - chr5_2:22459878-22459897 None:intergenic 45.0%
TTAGAACGCGCACCAATTTC+AGG - chr5_2:22459886-22459905 None:intergenic 45.0%
TTGGAACAGGAAGAATGGGA+AGG + chr5_2:22459921-22459940 Msa0763300:CDS 45.0%
!! GCTTTAATTTGCAGGTGTGG+TGG + chr5_2:22460333-22460352 Msa0763300:intron 45.0%
AGTATATTGAGAGCGGTGAG+TGG + chr5_2:22460389-22460408 Msa0763300:CDS 45.0%
AACTACCGCAACGTGAAGAA+CGG - chr5_2:22460482-22460501 None:intergenic 45.0%
TAGCAGCAGCAAGAAGAACA+GGG - chr5_2:22460711-22460730 None:intergenic 45.0%
TTAGCAGCAGCAAGAAGAAC+AGG - chr5_2:22460712-22460731 None:intergenic 45.0%
TGTTCTTCTTGCTGCTGCTA+AGG + chr5_2:22460711-22460730 Msa0763300:CDS 45.0%
GTTCTTCTTGCTGCTGCTAA+GGG + chr5_2:22460712-22460731 Msa0763300:CDS 45.0%
TCTTTACCGTTGTACACCGT+TGG + chr5_2:22460756-22460775 Msa0763300:CDS 45.0%
TGCGATAATTATCATCGGCC+AGG - chr5_2:22460786-22460805 None:intergenic 45.0%
! GAGGCATTTGAGGAAATCGT+TGG - chr5_2:22460953-22460972 None:intergenic 45.0%
CCGATTCAAAGTGCGATTTG+TGG - chr5_2:22460980-22460999 None:intergenic 45.0%
ATGCGTGCCAATGCGTATAA+TGG - chr5_2:22461014-22461033 None:intergenic 45.0%
ATGCCTTCTGTGTTTCCAAG+TGG + chr5_2:22461032-22461051 Msa0763300:CDS 45.0%
CTACCACTTGGAAACACAGA+AGG - chr5_2:22461038-22461057 None:intergenic 45.0%
TCTGTGTTTCCAAGTGGTAG+TGG + chr5_2:22461038-22461057 Msa0763300:CDS 45.0%
AACCCATATCCACTACCACT+TGG - chr5_2:22461050-22461069 None:intergenic 45.0%
TACTCCTCAATTGTCCCTTC+GGG - chr5_2:22461649-22461668 None:intergenic 45.0%
GTCTTGTAATCCAGACCCTA+AGG + chr5_2:22462169-22462188 Msa0763300:intron 45.0%
! GGCTTTGTATTCACACCCTT+AGG - chr5_2:22462188-22462207 None:intergenic 45.0%
TCCCTCCAATTGTATCCATC+AGG + chr5_2:22462448-22462467 Msa0763300:intron 45.0%
AGGGTAATCCTGACCTCTTA+TGG + chr5_2:22462647-22462666 Msa0763300:CDS 45.0%
GGGTAATCCTGACCTCTTAT+GGG + chr5_2:22462648-22462667 Msa0763300:CDS 45.0%
TGCAACTGTAAATGGACGGA+AGG + chr5_2:22462750-22462769 Msa0763300:CDS 45.0%
AAATGCCGTGTAGACGCATT+TGG + chr5_2:22462781-22462800 Msa0763300:CDS 45.0%
TGGCAATTCCATGTTGCACT+TGG + chr5_2:22462801-22462820 Msa0763300:CDS 45.0%
AATTCCATGTTGCACTTGGC+AGG + chr5_2:22462805-22462824 Msa0763300:CDS 45.0%
ATATCCTGCCAAGTGCAACA+TGG - chr5_2:22462812-22462831 None:intergenic 45.0%
CTACGATCAAGATCAGAGGA+AGG - chr5_2:22462841-22462860 None:intergenic 45.0%
GGATCTACGATCAAGATCAG+AGG - chr5_2:22462845-22462864 None:intergenic 45.0%
TCTCTTTGCATCTGCATAGC+AGG - chr5_2:22462871-22462890 None:intergenic 45.0%
CATGTATGTATGCGAGTGAG+TGG - chr5_2:22462938-22462957 None:intergenic 45.0%
AATTGTGCACCCCAAGTGTA+AGG + chr5_2:22463396-22463415 Msa0763300:intron 45.0%
GTGATGTCGTGCAAGAACAA+GGG - chr5_2:22463613-22463632 None:intergenic 45.0%
TGTGATGTCGTGCAAGAACA+AGG - chr5_2:22463614-22463633 None:intergenic 45.0%
ACTTCGGTCCTTCTCTTCAT+TGG + chr5_2:22463682-22463701 Msa0763300:CDS 45.0%
! CATTGCCCTTTTCTTCTCTG+TGG + chr5_2:22463774-22463793 Msa0763300:CDS 45.0%
CATAGCAAGTGAAGCACAGA+AGG - chr5_2:22463815-22463834 None:intergenic 45.0%
GACGGAACTAGAACGATAAC+AGG - chr5_2:22463892-22463911 None:intergenic 45.0%
ATCTTGTGGGACATGGTCTG+TGG + chr5_2:22459842-22459861 Msa0763300:CDS 50.0%
TCTTGTGGGACATGGTCTGT+GGG + chr5_2:22459843-22459862 Msa0763300:CDS 50.0%
GCCGATCCAGATATTGAGCA+AGG + chr5_2:22460060-22460079 Msa0763300:CDS 50.0%
ATTCCACATCCTCTATGGGG+AGG + chr5_2:22460455-22460474 Msa0763300:CDS 50.0%
TTCACGTTGCGGTAGTTGCT+GGG + chr5_2:22460485-22460504 Msa0763300:CDS 50.0%
CAGCTCAGCAACAAGAGCTA+GGG - chr5_2:22460590-22460609 None:intergenic 50.0%
TCAGCTCAGCAACAAGAGCT+AGG - chr5_2:22460591-22460610 None:intergenic 50.0%
GGTCTTCCAACGGTGTACAA+CGG - chr5_2:22460765-22460784 None:intergenic 50.0%
TTGTACACCGTTGGAAGACC+TGG + chr5_2:22460765-22460784 Msa0763300:CDS 50.0%
!! TTGTGGGCAAGAGGCATTTG+AGG - chr5_2:22460963-22460982 None:intergenic 50.0%
AAGTGCGATTTGTGGGCAAG+AGG - chr5_2:22460972-22460991 None:intergenic 50.0%
ACTCCTCAATTGTCCCTTCG+GGG - chr5_2:22461648-22461667 None:intergenic 50.0%
TCACAACAAGGGTTCGCACA+AGG - chr5_2:22462105-22462124 None:intergenic 50.0%
TCGGGTGCAAAGCACACAAA+CGG - chr5_2:22462146-22462165 None:intergenic 50.0%
GTATTCACACCCTTAGGGTC+TGG - chr5_2:22462182-22462201 None:intergenic 50.0%
TCAATGGCCCATAAGAGGTC+AGG - chr5_2:22462658-22462677 None:intergenic 50.0%
TTGCATCTGCATAGCAGGAC+CGG - chr5_2:22462866-22462885 None:intergenic 50.0%
CACTAGCTCCTTGTGGCTTT+CGG - chr5_2:22463464-22463483 None:intergenic 50.0%
CAGCTTTCACTAGCTCCTTG+TGG - chr5_2:22463471-22463490 None:intergenic 50.0%
CACAAGGAGCTAGTGAAAGC+TGG + chr5_2:22463469-22463488 Msa0763300:intron 50.0%
TTTCAGCGTAACGAGCCGTT+AGG - chr5_2:22463711-22463730 None:intergenic 50.0%
CTTGTGGGACATGGTCTGTG+GGG + chr5_2:22459844-22459863 Msa0763300:CDS 55.0%
AAGAACGGTCCTCCCCATAG+AGG - chr5_2:22460467-22460486 None:intergenic 55.0%
GAGGACCGTTCTTCACGTTG+CGG + chr5_2:22460474-22460493 Msa0763300:CDS 55.0%
CTTCACGTTGCGGTAGTTGC+TGG + chr5_2:22460484-22460503 Msa0763300:CDS 55.0%
GCTCTTGTTGCTGAGCTGAC+CGG + chr5_2:22460592-22460611 Msa0763300:CDS 55.0%
TCATCGGCCAGGTCTTCCAA+CGG - chr5_2:22460775-22460794 None:intergenic 55.0%
TGTCCCCGAAGGGACAATTG+AGG + chr5_2:22461642-22461661 Msa0763300:intron 55.0%
! AGGAAGAGGCGCAACTGTGA+CGG - chr5_2:22463910-22463929 None:intergenic 55.0%
GGTCCTCCCCATAGAGGATG+TGG - chr5_2:22460461-22460480 None:intergenic 60.0%
GCTGCAGCTTTCACTGTCCC+TGG + chr5_2:22463562-22463581 Msa0763300:CDS 60.0%
GCAGCTTTCACTGTCCCTGG+TGG + chr5_2:22463565-22463584 Msa0763300:CDS 60.0%
TGCGGTAGTTGCTGGGCACG+AGG + chr5_2:22460492-22460511 Msa0763300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 22459838 22463960 22459838 ID=Msa0763300;Name=Msa0763300
chr5_2 mRNA 22459838 22463960 22459838 ID=Msa0763300-mRNA-1;Parent=Msa0763300;Name=Msa0763300-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0|0|0|1|0.33|0.14|7|0|591
chr5_2 exon 22459838 22460081 22459838 ID=Msa0763300-mRNA-1:exon:9191;Parent=Msa0763300-mRNA-1
chr5_2 exon 22460347 22460577 22460347 ID=Msa0763300-mRNA-1:exon:9192;Parent=Msa0763300-mRNA-1
chr5_2 exon 22460587 22460808 22460587 ID=Msa0763300-mRNA-1:exon:9193;Parent=Msa0763300-mRNA-1
chr5_2 exon 22460931 22461092 22460931 ID=Msa0763300-mRNA-1:exon:9194;Parent=Msa0763300-mRNA-1
chr5_2 exon 22462470 22462718 22462470 ID=Msa0763300-mRNA-1:exon:9195;Parent=Msa0763300-mRNA-1
chr5_2 exon 22462728 22462906 22462728 ID=Msa0763300-mRNA-1:exon:9196;Parent=Msa0763300-mRNA-1
chr5_2 exon 22463475 22463960 22463475 ID=Msa0763300-mRNA-1:exon:9197;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22459838 22460081 22459838 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22460347 22460577 22460347 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22460587 22460808 22460587 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22460931 22461092 22460931 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22462470 22462718 22462470 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22462728 22462906 22462728 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
chr5_2 CDS 22463475 22463960 22463475 ID=Msa0763300-mRNA-1:cds;Parent=Msa0763300-mRNA-1
Gene Sequence

>Msa0763300

AACTATCTTGTGGGACATGGTCTGTGGGGTGTTGTGACCTCTATTCCTGAAATTGGTGCGCGTTCTAAGACTGAATATGAGATTTGGAACAGGAAGAATGGGAAGGCATTGCATATCATTCAACTAACATGTGGACCAGAGAATCTTACTCATATTAGAGATCTTCATATTGCTAAAGAAGCCTGGAATAAATTGGGTGCAACTTATAGCTCAGATTTACAAGCCGATCCAGATATTGAGCAAGGTGTGGTGGATGATAGTCTCCTTCAATATAAATCGCTGCACAAGTATATTGAGAGCGGTGAGTGGAAAGATGCAAACTCGTTTATTAAGAGGGACAGTACAGCAATATATTCCACATCCTCTATGGGGAGGACCGTTCTTCACGTTGCGGTAGTTGCTGGGCACGAGGAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAAGTTAGTGAAAATGAAAGACAATCGAGCCCTAGCTCTTGTTGCTGAGCTGACCGGAAACACGAATATAGCGAAGTGTATGACTATGGTATATAAGAAAATAACACGGTCAGAGGACCTGTTATCTATGAAGACCAATGATGGTGAAATCCCTGTTCTTCTTGCTGCTGCTAAGGGACACAAAGAAATGACACGTTATCTTTACCGTTGTACACCGTTGGAAGACCTGGCCGATGATAATTATCGCAATGGTGTGGCTTTGAGTTTACTCCAACGATTTCCTCAAATGCCTCTTGCCCACAAATCGCACTTTGAATCGGATTGTGTGCAACCATTATACGCATTGGCACGCATGCCTTCTGTGTTTCCAAGTGGTAGTGGATATGGGTTCATACGACAATTCTTTAACGATAGAATAAGGAAAATATATAATCAGAAAATGACCTACCGTGTAGCTCTTGAAATATTGAGTTGCTTGCACCAAAGAATTCAAGAGTTTAAGGAATCAGAACTTAGAGAGGCTTCGGCTTACGATGCAATGTTACAAGCAGCAAAGCATGGGATTATTGAGTTTATAGATGCAATGAGAAAGGGTAATCCTGACCTCTTATGGGCCATTGATAAAAATAAAAGAGGCGTATTTTCACATGCAATTTTGAACCCCGTTTTCGAACTCATACATGATGCAACTGTAAATGGACGGAAGGAGATAGTTAAATGCCGTGTAGACGCATTTGGCAATTCCATGTTGCACTTGGCAGGATATTTAGGGCCTTCCTCTGATCTTGATCGTAGATCCGGTCCTGCTATGCAGATGCAAAGAGAAATTCTATGGTTCAAGGAGCTAGTGAAAGCTGGAGAAAAATGGGCAAAAGATACAGCTGGTTCATTTACTCTTGTGGCTACACTCATCACTACTATCATGTTTGCTGCAGCTTTCACTGTCCCTGGTGGAAACAATCAAGACAATGGAGTTCCCTTGTTCTTGCACGACATCACATTTGATGTGTTTATTATAGCAGATGCAGCATCTCTTTTCACTTCTTCAACTTCGGTCCTTCTCTTCATTGGAATCCTAACGGCTCGTTACGCTGAAAAAGATTTCCTTAAGTCATTGCCACTAAGGTTACTTTTCGCACTCATTGCCCTTTTCTTCTCTGTGGTTTCTATGATAGTTGCCTTCTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCATAGAGTCATAATAACAGCAATGTCATTTGCCAGTGTTCCTGTTATCGTTCTAGTTCCGTCACAGTTGCGCCTCTTCCTTGAGATTTTCAAGTCTACAGTATTATCCAAT
Protein sequence

>Msa0763300

NYLVGHGLWGVVTSIPEIGARSKTEYEIWNRKNGKALHIIQLTCGPENLTHIRDLHIAKEAWNKLGATYSSDLQADPDIEQGVVDDSLLQYKSLHKYIESGEWKDANSFIKRDSTAIYSTSSMGRTVLHVAVVAGHEEIVKKLVKEGKDKLVKMKDNRALALVAELTGNTNIAKCMTMVYKKITRSEDLLSMKTNDGEIPVLLAAAKGHKEMTRYLYRCTPLEDLADDNYRNGVALSLLQRFPQMPLAHKSHFESDCVQPLYALARMPSVFPSGSGYGFIRQFFNDRIRKIYNQKMTYRVALEILSCLHQRIQEFKESELREASAYDAMLQAAKHGIIEFIDAMRKGNPDLLWAIDKNKRGVFSHAILNPVFELIHDATVNGRKEIVKCRVDAFGNSMLHLAGYLGPSSDLDRRSGPAMQMQREILWFKELVKAGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDNGVPLFLHDITFDVFIIADAASLFTSSTSVLLFIGILTARYAEKDFLKSLPLRLLFALIALFFSVVSMIVAFCASLAMLLKGHHRVIITAMSFASVPVIVLVPSQLRLFLEIFKSTVLSN