Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143710 | XP_024640501.2 | 65.022 | 689 | 129 | 7 | 19 | 597 | 28 | 714 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143710 | A0A396HTM3 | 65.341 | 704 | 116 | 10 | 19 | 596 | 32 | 733 | 0.0 | 851 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0143710 | -0.800485 | 1.410088e-48 | -8.615850e-47 |
| Msa0010150 | Msa0143710 | 0.815419 | 9.334657e-52 | -8.615850e-47 |
| Msa0024280 | Msa0143710 | 0.813746 | 2.189650e-51 | -8.615850e-47 |
| Msa0024290 | Msa0143710 | 0.802228 | 6.198128e-49 | -8.615850e-47 |
| Msa0036580 | Msa0143710 | 0.800696 | 1.276905e-48 | -8.615850e-47 |
| Msa0048950 | Msa0143710 | 0.862188 | 6.049940e-64 | -8.615850e-47 |
| Msa0054760 | Msa0143710 | -0.819083 | 1.399374e-52 | -8.615850e-47 |
| Msa0059880 | Msa0143710 | 0.888263 | 6.895135e-73 | -8.615850e-47 |
| Msa0072030 | Msa0143710 | 0.825095 | 5.649882e-54 | -8.615850e-47 |
| Msa0074620 | Msa0143710 | 0.805220 | 1.482602e-49 | -8.615850e-47 |
| Msa0129850 | Msa0143710 | 0.800372 | 1.486415e-48 | -8.615850e-47 |
| Msa0131460 | Msa0143710 | 0.806190 | 9.278644e-50 | -8.615850e-47 |
| Msa0139460 | Msa0143710 | 0.816288 | 5.975123e-52 | -8.615850e-47 |
| Msa0140270 | Msa0143710 | 0.823672 | 1.221303e-53 | -8.615850e-47 |
| Msa0143680 | Msa0143710 | 0.970604 | 7.195328e-132 | -8.615850e-47 |
| Msa0143710 | Msa0143740 | 0.977696 | 2.676395e-144 | -8.615850e-47 |
| Msa0143710 | Msa0143770 | 0.978209 | 2.381367e-145 | -8.615850e-47 |
| Msa0143710 | Msa0147670 | 0.816190 | 6.284921e-52 | -8.615850e-47 |
| Msa0143710 | Msa0150910 | 0.857816 | 1.261136e-62 | -8.615850e-47 |
| Msa0143710 | Msa0155850 | 0.806690 | 7.276535e-50 | -8.615850e-47 |
| Msa0143710 | Msa0163340 | 0.823723 | 1.188025e-53 | -8.615850e-47 |
| Msa0143710 | Msa0164630 | -0.802807 | 4.708090e-49 | -8.615850e-47 |
| Msa0143710 | Msa0176620 | 0.801273 | 9.733188e-49 | -8.615850e-47 |
| Msa0143710 | Msa0177550 | 0.806668 | 7.356348e-50 | -8.615850e-47 |
| Msa0143710 | Msa0190670 | 0.820165 | 7.923445e-53 | -8.615850e-47 |
| Msa0143710 | Msa0194230 | 0.800059 | 1.721676e-48 | -8.615850e-47 |
| Msa0143710 | Msa0212550 | 0.812356 | 4.417058e-51 | -8.615850e-47 |
| Msa0143710 | Msa0219210 | 0.819136 | 1.360998e-52 | -8.615850e-47 |
| Msa0143710 | Msa0223880 | 0.817116 | 3.896605e-52 | -8.615850e-47 |
| Msa0143710 | Msa0230140 | 0.803609 | 3.212476e-49 | -8.615850e-47 |
| Msa0143710 | Msa0252930 | 0.817708 | 2.865813e-52 | -8.615850e-47 |
| Msa0143710 | Msa0259110 | 0.846026 | 2.811744e-59 | -8.615850e-47 |
| Msa0143710 | Msa0259300 | 0.816084 | 6.636176e-52 | -8.615850e-47 |
| Msa0143710 | Msa0265060 | 0.818092 | 2.347315e-52 | -8.615850e-47 |
| Msa0143710 | Msa0274250 | 0.818439 | 1.959577e-52 | -8.615850e-47 |
| Msa0143710 | Msa0274260 | 0.811035 | 8.563729e-51 | -8.615850e-47 |
| Msa0143710 | Msa0278950 | 0.818026 | 2.429841e-52 | -8.615850e-47 |
| Msa0143710 | Msa0298270 | 0.837318 | 5.578609e-57 | -8.615850e-47 |
| Msa0143710 | Msa0314440 | 0.801039 | 1.086728e-48 | -8.615850e-47 |
| Msa0143710 | Msa0336070 | 0.822135 | 2.785368e-53 | -8.615850e-47 |
| Msa0143710 | Msa0340650 | 0.814100 | 1.829612e-51 | -8.615850e-47 |
| Msa0143710 | Msa0342130 | 0.832800 | 7.688099e-56 | -8.615850e-47 |
| Msa0143710 | Msa0342160 | 0.827049 | 1.939030e-54 | -8.615850e-47 |
| Msa0143710 | Msa0343720 | 0.810598 | 1.064478e-50 | -8.615850e-47 |
| Msa0143710 | Msa0374130 | 0.818624 | 1.778439e-52 | -8.615850e-47 |
| Msa0143710 | Msa0382610 | 0.801611 | 8.299809e-49 | -8.615850e-47 |
| Msa0143710 | Msa0414480 | 0.814851 | 1.247800e-51 | -8.615850e-47 |
| Msa0143710 | Msa0430460 | 0.814355 | 1.606768e-51 | -8.615850e-47 |
| Msa0143710 | Msa0469550 | 0.823109 | 1.653006e-53 | -8.615850e-47 |
| Msa0143710 | Msa0491760 | 0.819875 | 9.230396e-53 | -8.615850e-47 |
| Msa0143710 | Msa0491770 | 0.808384 | 3.180099e-50 | -8.615850e-47 |
| Msa0143710 | Msa0515260 | 0.823137 | 1.628077e-53 | -8.615850e-47 |
| Msa0143710 | Msa0535570 | 0.834917 | 2.270836e-56 | -8.615850e-47 |
| Msa0143710 | Msa0538450 | 0.816464 | 5.456617e-52 | -8.615850e-47 |
| Msa0143710 | Msa0538520 | 0.813332 | 2.700773e-51 | -8.615850e-47 |
| Msa0143710 | Msa0538650 | 0.811322 | 7.420530e-51 | -8.615850e-47 |
| Msa0143710 | Msa0543740 | 0.801075 | 1.068186e-48 | -8.615850e-47 |
| Msa0143710 | Msa0548970 | 0.824086 | 9.766063e-54 | -8.615850e-47 |
| Msa0143710 | Msa0549920 | 0.855875 | 4.704429e-62 | -8.615850e-47 |
| Msa0143710 | Msa0549930 | 0.844930 | 5.572153e-59 | -8.615850e-47 |
| Msa0143710 | Msa0554660 | 0.814170 | 1.765474e-51 | -8.615850e-47 |
| Msa0143710 | Msa0577050 | -0.800946 | 1.135144e-48 | -8.615850e-47 |
| Msa0143710 | Msa0579530 | 0.814827 | 1.263640e-51 | -8.615850e-47 |
| Msa0143710 | Msa0584970 | 0.810414 | 1.166661e-50 | -8.615850e-47 |
| Msa0143710 | Msa0591490 | 0.843548 | 1.309922e-58 | -8.615850e-47 |
| Msa0143710 | Msa0594320 | 0.821838 | 3.262647e-53 | -8.615850e-47 |
| Msa0143710 | Msa0599600 | 0.814634 | 1.393980e-51 | -8.615850e-47 |
| Msa0143710 | Msa0602050 | 0.808295 | 3.321694e-50 | -8.615850e-47 |
| Msa0143710 | Msa0603950 | 0.837712 | 4.421279e-57 | -8.615850e-47 |
| Msa0143710 | Msa0605400 | 0.828340 | 9.493729e-55 | -8.615850e-47 |
| Msa0143710 | Msa0605410 | 0.831308 | 1.797063e-55 | -8.615850e-47 |
| Msa0143710 | Msa0605470 | 0.850681 | 1.450922e-60 | -8.615850e-47 |
| Msa0143710 | Msa0618260 | -0.804607 | 1.991892e-49 | -8.615850e-47 |
| Msa0143710 | Msa0623980 | 0.857775 | 1.297166e-62 | -8.615850e-47 |
| Msa0143710 | Msa0631700 | 0.836798 | 7.574056e-57 | -8.615850e-47 |
| Msa0143710 | Msa0640290 | 0.803824 | 2.899549e-49 | -8.615850e-47 |
| Msa0143710 | Msa0643840 | 0.819947 | 8.886771e-53 | -8.615850e-47 |
| Msa0143710 | Msa0645150 | 0.815267 | 1.008998e-51 | -8.615850e-47 |
| Msa0143710 | Msa0646210 | 0.859234 | 4.762304e-63 | -8.615850e-47 |
| Msa0143710 | Msa0650310 | 0.800620 | 1.322945e-48 | -8.615850e-47 |
| Msa0143710 | Msa0650440 | 0.805029 | 1.625719e-49 | -8.615850e-47 |
| Msa0143710 | Msa0670260 | 0.812237 | 4.689836e-51 | -8.615850e-47 |
| Msa0143710 | Msa0670360 | 0.853337 | 2.554788e-61 | -8.615850e-47 |
| Msa0143710 | Msa0671640 | 0.840932 | 6.454142e-58 | -8.615850e-47 |
| Msa0143710 | Msa0676190 | 0.805064 | 1.598473e-49 | -8.615850e-47 |
| Msa0143710 | Msa0678620 | 0.840035 | 1.107952e-57 | -8.615850e-47 |
| Msa0143710 | Msa0684720 | 0.844744 | 6.252359e-59 | -8.615850e-47 |
| Msa0143710 | Msa0711240 | 0.832493 | 9.162420e-56 | -8.615850e-47 |
| Msa0143710 | Msa0716600 | 0.801682 | 8.024020e-49 | -8.615850e-47 |
| Msa0143710 | Msa0719880 | 0.864005 | 1.658975e-64 | -8.615850e-47 |
| Msa0143710 | Msa0727480 | 0.854817 | 9.558531e-62 | -8.615850e-47 |
| Msa0143710 | Msa0735280 | 0.832105 | 1.143094e-55 | -8.615850e-47 |
| Msa0143710 | Msa0735340 | 0.811208 | 7.853081e-51 | -8.615850e-47 |
| Msa0143710 | Msa0747900 | -0.801498 | 8.754104e-49 | -8.615850e-47 |
| Msa0143710 | Msa0758000 | 0.808079 | 3.693858e-50 | -8.615850e-47 |
| Msa0143710 | Msa0763300 | 0.829910 | 3.950541e-55 | -8.615850e-47 |
| Msa0143710 | Msa0768670 | 0.843258 | 1.565429e-58 | -8.615850e-47 |
| Msa0143710 | Msa0768720 | 0.838968 | 2.097809e-57 | -8.615850e-47 |
| Msa0143710 | Msa0777070 | 0.820280 | 7.455205e-53 | -8.615850e-47 |
| Msa0143710 | Msa0777250 | 0.833968 | 3.931196e-56 | -8.615850e-47 |
| Msa0143710 | Msa0787860 | 0.806492 | 8.013071e-50 | -8.615850e-47 |
| Msa0143710 | Msa0791300 | 0.812173 | 4.843528e-51 | -8.615850e-47 |
| Msa0143710 | Msa0802590 | 0.940771 | 1.318167e-100 | -8.615850e-47 |
| Msa0143710 | Msa0814160 | 0.841417 | 4.811718e-58 | -8.615850e-47 |
| Msa0143710 | Msa0824860 | 0.814662 | 1.374497e-51 | -8.615850e-47 |
| Msa0143710 | Msa0836750 | 0.801918 | 7.178925e-49 | -8.615850e-47 |
| Msa0143710 | Msa0841130 | 0.931289 | 4.704594e-94 | -8.615850e-47 |
| Msa0143710 | Msa0841170 | 0.928411 | 2.999675e-92 | -8.615850e-47 |
| Msa0143710 | Msa0847140 | 0.800716 | 1.264844e-48 | -8.615850e-47 |
| Msa0143710 | Msa0854840 | 0.840678 | 7.524172e-58 | -8.615850e-47 |
| Msa0143710 | Msa0863840 | 0.826500 | 2.622532e-54 | -8.615850e-47 |
| Msa0143710 | Msa0864160 | 0.803899 | 2.796334e-49 | -8.615850e-47 |
| Msa0143710 | Msa0883640 | 0.868840 | 4.842341e-66 | -8.615850e-47 |
| Msa0143710 | Msa0902340 | 0.846323 | 2.334361e-59 | -8.615850e-47 |
| Msa0143710 | Msa0910830 | 0.887828 | 1.012395e-72 | -8.615850e-47 |
| Msa0143710 | Msa0913550 | 0.808180 | 3.514475e-50 | -8.615850e-47 |
| Msa0143710 | Msa0941120 | 0.802492 | 5.467098e-49 | -8.615850e-47 |
| Msa0143710 | Msa0951150 | 0.807149 | 5.819530e-50 | -8.615850e-47 |
| Msa0143710 | Msa0960090 | 0.870771 | 1.134679e-66 | -8.615850e-47 |
| Msa0143710 | Msa0967820 | 0.824903 | 6.271610e-54 | -8.615850e-47 |
| Msa0143710 | Msa0982120 | -0.807473 | 4.969374e-50 | -8.615850e-47 |
| Msa0143710 | Msa0985700 | 0.869137 | 3.877944e-66 | -8.615850e-47 |
| Msa0143710 | Msa0987640 | 0.817740 | 2.819149e-52 | -8.615850e-47 |
| Msa0143710 | Msa0993450 | 0.831964 | 1.238432e-55 | -8.615850e-47 |
| Msa0143710 | Msa1003110 | 0.859416 | 4.200912e-63 | -8.615850e-47 |
| Msa0143710 | Msa1003240 | 0.800028 | 1.746732e-48 | -8.615850e-47 |
| Msa0143710 | Msa1006170 | 0.803592 | 3.238199e-49 | -8.615850e-47 |
| Msa0143710 | Msa1007940 | 0.822455 | 2.347741e-53 | -8.615850e-47 |
| Msa0143710 | Msa1007950 | 0.808953 | 2.403935e-50 | -8.615850e-47 |
| Msa0143710 | Msa1020540 | 0.863115 | 3.133884e-64 | -8.615850e-47 |
| Msa0143710 | Msa1021620 | 0.870735 | 1.165750e-66 | -8.615850e-47 |
| Msa0143710 | Msa1024350 | 0.838337 | 3.054253e-57 | -8.615850e-47 |
| Msa0143710 | Msa1026050 | 0.841409 | 4.835246e-58 | -8.615850e-47 |
| Msa0143710 | Msa1036590 | 0.802747 | 4.844642e-49 | -8.615850e-47 |
| Msa0143710 | Msa1041630 | 0.815187 | 1.050989e-51 | -8.615850e-47 |
| Msa0143710 | Msa1046210 | 0.818631 | 1.772094e-52 | -8.615850e-47 |
| Msa0143710 | Msa1046220 | 0.807219 | 5.625768e-50 | -8.615850e-47 |
| Msa0143710 | Msa1060320 | 0.801109 | 1.051415e-48 | -8.615850e-47 |
| Msa0143710 | Msa1061670 | 0.845032 | 5.230068e-59 | -8.615850e-47 |
| Msa0143710 | Msa1076830 | 0.835015 | 2.145104e-56 | -8.615850e-47 |
| Msa0143710 | Msa1076900 | 0.804313 | 2.293234e-49 | -8.615850e-47 |
| Msa0143710 | Msa1081530 | -0.804711 | 1.894366e-49 | -8.615850e-47 |
| Msa0143710 | Msa1081610 | 0.820492 | 6.667241e-53 | -8.615850e-47 |
| Msa0143710 | Msa1085370 | -0.801926 | 7.151222e-49 | -8.615850e-47 |
| Msa0143710 | Msa1087370 | 0.814037 | 1.889266e-51 | -8.615850e-47 |
| Msa0143710 | Msa1087380 | 0.834589 | 2.746878e-56 | -8.615850e-47 |
| Msa0143710 | Msa1091000 | 0.841264 | 5.281124e-58 | -8.615850e-47 |
| Msa0143710 | Msa1104960 | 0.800156 | 1.644839e-48 | -8.615850e-47 |
| Msa0143710 | Msa1106960 | 0.833447 | 5.306553e-56 | -8.615850e-47 |
| Msa0143710 | Msa1109540 | 0.808117 | 3.625351e-50 | -8.615850e-47 |
| Msa0143710 | Msa1109880 | 0.844036 | 9.693130e-59 | -8.615850e-47 |
| Msa0143710 | Msa1109890 | 0.875812 | 2.293909e-68 | -8.615850e-47 |
| Msa0143710 | Msa1133850 | 0.801776 | 7.677511e-49 | -8.615850e-47 |
| Msa0143710 | Msa1133860 | 0.855761 | 5.078671e-62 | -8.615850e-47 |
| Msa0143710 | Msa1149020 | 0.862282 | 5.660156e-64 | -8.615850e-47 |
| Msa0143710 | Msa1166530 | 0.815202 | 1.043032e-51 | -8.615850e-47 |
| Msa0143710 | Msa1182800 | -0.803144 | 4.009709e-49 | -8.615850e-47 |
| Msa0143710 | Msa1193400 | -0.809995 | 1.436247e-50 | -8.615850e-47 |
| Msa0143710 | Msa1193430 | -0.805380 | 1.372941e-49 | -8.615850e-47 |
| Msa0143710 | Msa1214960 | 0.830545 | 2.765538e-55 | -8.615850e-47 |
| Msa0143710 | Msa1216600 | 0.817032 | 4.069170e-52 | -8.615850e-47 |
| Msa0143710 | Msa1219780 | 0.801404 | 9.147881e-49 | -8.615850e-47 |
| Msa0143710 | Msa1222030 | 0.802656 | 5.059055e-49 | -8.615850e-47 |
| Msa0143710 | Msa1243730 | -0.807537 | 4.815433e-50 | -8.615850e-47 |
| Msa0143710 | Msa1249410 | -0.830163 | 3.428510e-55 | -8.615850e-47 |
| Msa0143710 | Msa1262810 | 0.800846 | 1.189804e-48 | -8.615850e-47 |
| Msa0143710 | Msa1263000 | 0.801937 | 7.113648e-49 | -8.615850e-47 |
| Msa0143710 | Msa1266710 | 0.808137 | 3.590697e-50 | -8.615850e-47 |
| Msa0143710 | Msa1286420 | 0.846286 | 2.389883e-59 | -8.615850e-47 |
| Msa0143710 | Msa1296870 | 0.831861 | 1.313054e-55 | -8.615850e-47 |
| Msa0143710 | Msa1300610 | 0.838335 | 3.056510e-57 | -8.615850e-47 |
| Msa0143710 | Msa1323030 | 0.842994 | 1.840148e-58 | -8.615850e-47 |
| Msa0143710 | Msa1323120 | 0.820996 | 5.105178e-53 | -8.615850e-47 |
| Msa0143710 | Msa1323160 | 0.827825 | 1.263268e-54 | -8.615850e-47 |
| Msa0143710 | Msa1329740 | 0.816641 | 4.980487e-52 | -8.615850e-47 |
| Msa0143710 | Msa1335500 | 0.800135 | 1.661193e-48 | -8.615850e-47 |
| Msa0143710 | Msa1341030 | 0.800619 | 1.323940e-48 | -8.615850e-47 |
| Msa0143710 | Msa1349810 | -0.801659 | 8.112223e-49 | -8.615850e-47 |
| Msa0143710 | Msa1355340 | 0.810022 | 1.417435e-50 | -8.615850e-47 |
| Msa0143710 | Msa1357490 | 0.827674 | 1.373457e-54 | -8.615850e-47 |
| Msa0143710 | Msa1357750 | 0.825856 | 3.731118e-54 | -8.615850e-47 |
| Msa0143710 | Msa1357860 | 0.805461 | 1.319920e-49 | -8.615850e-47 |
| Msa0143710 | Msa1359620 | -0.840189 | 1.009763e-57 | -8.615850e-47 |
| Msa0143710 | Msa1373560 | 0.837350 | 5.476231e-57 | -8.615850e-47 |
| Msa0143710 | Msa1376070 | 0.847316 | 1.249051e-59 | -8.615850e-47 |
| Msa0143710 | Msa1377460 | 0.808456 | 3.069654e-50 | -8.615850e-47 |
| Msa0143710 | Msa1377520 | 0.843151 | 1.670944e-58 | -8.615850e-47 |
| Msa0143710 | Msa1378400 | 0.818367 | 2.034009e-52 | -8.615850e-47 |
| Msa0143710 | Msa1386120 | 0.814704 | 1.345209e-51 | -8.615850e-47 |
| Msa0143710 | Msa1403700 | -0.840633 | 7.732085e-58 | -8.615850e-47 |
| Msa0143710 | Msa1407210 | 0.805859 | 1.089252e-49 | -8.615850e-47 |
| Msa0143710 | Msa1407670 | 0.819314 | 1.239372e-52 | -8.615850e-47 |
| Msa0143710 | Msa1409060 | 0.830248 | 3.267441e-55 | -8.615850e-47 |
| Msa0143710 | Msa1420020 | 0.827582 | 1.444673e-54 | -8.615850e-47 |
| Msa0143710 | Msa1421120 | 0.820278 | 7.463558e-53 | -8.615850e-47 |
| Msa0143710 | Msa1426420 | 0.813293 | 2.754781e-51 | -8.615850e-47 |
| Msa0143710 | Msa1427600 | -0.802260 | 6.102897e-49 | -8.615850e-47 |
| Msa0143710 | Msa1427670 | 0.814176 | 1.760345e-51 | -8.615850e-47 |
| Msa0143710 | Msa1440400 | 0.930071 | 2.791055e-93 | -8.615850e-47 |
| Msa0143710 | Msa1443550 | -0.825893 | 3.655971e-54 | -8.615850e-47 |
| Msa0143710 | Msa1449770 | 0.821693 | 3.526227e-53 | -8.615850e-47 |
| Msa0143710 | Msa1459610 | 0.830349 | 3.087616e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143710 | MtrunA17_Chr5g0410171 | 65.341 | 704 | 116 | 10 | 19 | 596 | 32 | 733 | 0.0 | 851 |
| Msa0143710 | MtrunA17_Chr5g0410341 | 85.460 | 337 | 5 | 2 | 306 | 598 | 411 | 747 | 0.0 | 562 |
| Msa0143710 | MtrunA17_Chr5g0410341 | 87.859 | 313 | 14 | 4 | 19 | 307 | 30 | 342 | 0.0 | 556 |
| Msa0143710 | MtrunA17_Chr5g0410201 | 74.924 | 327 | 38 | 2 | 314 | 596 | 1 | 327 | 8.13e-168 | 480 |
| Msa0143710 | MtrunA17_Chr5g0410271 | 74.540 | 326 | 39 | 2 | 316 | 597 | 2 | 327 | 1.96e-165 | 474 |
| Msa0143710 | MtrunA17_Chr6g0457101 | 39.882 | 677 | 291 | 16 | 19 | 597 | 30 | 688 | 5.01e-140 | 423 |
| Msa0143710 | MtrunA17_Chr5g0410461 | 51.762 | 369 | 124 | 7 | 278 | 594 | 96 | 462 | 9.06e-108 | 332 |
| Msa0143710 | MtrunA17_Chr6g0456141 | 49.555 | 337 | 122 | 5 | 306 | 597 | 51 | 384 | 4.76e-100 | 309 |
| Msa0143710 | MtrunA17_Chr5g0410371 | 57.095 | 296 | 77 | 4 | 347 | 594 | 1 | 294 | 2.53e-99 | 304 |
| Msa0143710 | MtrunA17_Chr6g0456101 | 34.728 | 717 | 311 | 23 | 19 | 590 | 30 | 734 | 3.64e-99 | 318 |
| Msa0143710 | MtrunA17_Chr5g0410191 | 80.368 | 163 | 32 | 0 | 436 | 598 | 32 | 194 | 3.25e-84 | 261 |
| Msa0143710 | MtrunA17_Chr5g0410581 | 30.720 | 778 | 325 | 25 | 19 | 595 | 31 | 795 | 1.50e-78 | 264 |
| Msa0143710 | MtrunA17_Chr5g0410291 | 67.010 | 194 | 41 | 5 | 128 | 302 | 1 | 190 | 2.89e-77 | 244 |
| Msa0143710 | MtrunA17_Chr5g0410211 | 63.918 | 194 | 50 | 4 | 128 | 301 | 1 | 194 | 5.87e-71 | 227 |
| Msa0143710 | MtrunA17_Chr5g0410181 | 79.104 | 134 | 28 | 0 | 464 | 597 | 1 | 134 | 3.46e-68 | 217 |
| Msa0143710 | MtrunA17_Chr2g0297701 | 30.686 | 554 | 297 | 18 | 108 | 598 | 44 | 573 | 8.87e-58 | 204 |
| Msa0143710 | MtrunA17_Chr5g0443001 | 30.651 | 584 | 294 | 22 | 109 | 594 | 31 | 601 | 6.82e-55 | 196 |
| Msa0143710 | MtrunA17_Chr2g0297691 | 27.179 | 677 | 368 | 23 | 22 | 594 | 36 | 691 | 2.04e-49 | 182 |
| Msa0143710 | MtrunA17_Chr2g0297681 | 26.379 | 671 | 377 | 22 | 22 | 593 | 36 | 688 | 9.73e-47 | 175 |
| Msa0143710 | MtrunA17_Chr2g0297651 | 26.449 | 673 | 375 | 21 | 22 | 594 | 38 | 690 | 1.55e-46 | 174 |
| Msa0143710 | MtrunA17_Chr5g0410451 | 49.697 | 165 | 78 | 1 | 436 | 595 | 71 | 235 | 1.04e-45 | 161 |
| Msa0143710 | MtrunA17_Chr3g0100741 | 25.760 | 559 | 313 | 13 | 109 | 577 | 33 | 579 | 3.46e-44 | 166 |
| Msa0143710 | MtrunA17_Chr5g0410541 | 52.121 | 165 | 73 | 2 | 436 | 595 | 53 | 216 | 7.04e-44 | 156 |
| Msa0143710 | MtrunA17_Chr2g0297491 | 35.971 | 278 | 144 | 4 | 348 | 594 | 103 | 377 | 1.98e-43 | 160 |
| Msa0143710 | MtrunA17_Chr6g0456151 | 42.023 | 257 | 118 | 9 | 19 | 254 | 30 | 276 | 8.18e-43 | 155 |
| Msa0143710 | MtrunA17_Chr5g0410471 | 45.909 | 220 | 105 | 5 | 23 | 239 | 105 | 313 | 5.14e-41 | 151 |
| Msa0143710 | MtrunA17_Chr3g0100301 | 41.327 | 196 | 78 | 2 | 425 | 590 | 209 | 397 | 3.81e-39 | 148 |
| Msa0143710 | MtrunA17_Chr2g0297711 | 27.186 | 526 | 298 | 16 | 108 | 594 | 47 | 526 | 1.32e-38 | 149 |
| Msa0143710 | MtrunA17_Chr2g0297481 | 34.420 | 276 | 147 | 5 | 348 | 594 | 201 | 471 | 3.66e-38 | 147 |
| Msa0143710 | MtrunA17_Chr3g0096941 | 24.777 | 561 | 315 | 15 | 109 | 576 | 33 | 579 | 4.11e-37 | 145 |
| Msa0143710 | MtrunA17_Chr5g0410411 | 39.464 | 261 | 107 | 9 | 19 | 239 | 30 | 279 | 1.46e-36 | 139 |
| Msa0143710 | MtrunA17_Chr5g0410381 | 39.837 | 246 | 101 | 8 | 100 | 304 | 3 | 242 | 3.65e-36 | 135 |
| Msa0143710 | MtrunA17_Chr5g0410251 | 65.854 | 82 | 28 | 0 | 19 | 100 | 28 | 109 | 6.37e-33 | 122 |
| Msa0143710 | MtrunA17_Chr2g0286601 | 33.106 | 293 | 141 | 6 | 329 | 576 | 371 | 653 | 1.96e-30 | 126 |
| Msa0143710 | MtrunA17_Chr5g0410511 | 42.949 | 156 | 80 | 1 | 436 | 591 | 32 | 178 | 1.22e-29 | 116 |
| Msa0143710 | MtrunA17_Chr3g0098481 | 29.560 | 318 | 159 | 8 | 334 | 594 | 22 | 331 | 4.90e-29 | 118 |
| Msa0143710 | MtrunA17_Chr3g0102001 | 30.293 | 307 | 147 | 7 | 346 | 595 | 440 | 736 | 1.11e-26 | 115 |
| Msa0143710 | MtrunA17_Chr2g0286551 | 31.488 | 289 | 149 | 6 | 347 | 590 | 370 | 654 | 5.70e-25 | 109 |
| Msa0143710 | MtrunA17_Chr2g0286561 | 38.849 | 139 | 78 | 1 | 438 | 576 | 47 | 178 | 2.21e-24 | 101 |
| Msa0143710 | MtrunA17_Chr5g0410501 | 40.972 | 144 | 68 | 3 | 307 | 435 | 147 | 288 | 6.09e-24 | 102 |
| Msa0143710 | MtrunA17_Chr3g0098301 | 27.184 | 309 | 170 | 8 | 334 | 590 | 88 | 393 | 2.17e-22 | 99.8 |
| Msa0143710 | MtrunA17_Chr5g0410561 | 37.321 | 209 | 120 | 7 | 50 | 254 | 2 | 203 | 7.71e-22 | 94.4 |
| Msa0143710 | MtrunA17_Chr5g0439081 | 36.076 | 158 | 94 | 3 | 435 | 587 | 41 | 196 | 3.48e-21 | 92.4 |
| Msa0143710 | MtrunA17_Chr5g0410551 | 46.667 | 105 | 39 | 3 | 347 | 436 | 1 | 103 | 1.06e-20 | 88.2 |
| Msa0143710 | MtrunA17_Chr1g0211541 | 25.541 | 462 | 239 | 19 | 119 | 515 | 6 | 427 | 3.07e-20 | 94.4 |
| Msa0143710 | MtrunA17_Chr2g0284501 | 28.364 | 275 | 154 | 7 | 356 | 597 | 392 | 656 | 1.20e-19 | 93.2 |
| Msa0143710 | MtrunA17_Chr3g0098531 | 27.234 | 235 | 136 | 4 | 392 | 592 | 48 | 281 | 3.34e-19 | 88.6 |
| Msa0143710 | MtrunA17_Chr5g0439061 | 28.082 | 292 | 160 | 6 | 347 | 590 | 437 | 726 | 2.69e-18 | 89.0 |
| Msa0143710 | MtrunA17_Chr3g0100921 | 40.650 | 123 | 72 | 1 | 455 | 576 | 2 | 124 | 9.91e-18 | 80.1 |
| Msa0143710 | MtrunA17_Chr2g0284541 | 27.673 | 318 | 174 | 7 | 318 | 588 | 322 | 630 | 9.92e-18 | 87.0 |
| Msa0143710 | MtrunA17_Chr5g0410441 | 43.333 | 90 | 48 | 2 | 348 | 436 | 1 | 88 | 1.54e-17 | 78.6 |
| Msa0143710 | MtrunA17_Chr5g0439051 | 34.591 | 159 | 102 | 2 | 436 | 593 | 50 | 207 | 1.20e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143710 | AT3G18670.1 | 35.334 | 583 | 275 | 19 | 88 | 598 | 35 | 587 | 4.98e-96 | 306 |
| Msa0143710 | AT3G18670.2 | 33.280 | 628 | 282 | 19 | 88 | 598 | 35 | 642 | 3.09e-93 | 300 |
| Msa0143710 | AT5G04690.3 | 30.345 | 580 | 306 | 13 | 99 | 594 | 66 | 631 | 1.09e-64 | 224 |
| Msa0143710 | AT5G04690.1 | 31.194 | 561 | 306 | 15 | 99 | 594 | 66 | 611 | 3.33e-63 | 219 |
| Msa0143710 | AT5G04690.2 | 29.798 | 594 | 305 | 14 | 99 | 594 | 66 | 645 | 3.27e-62 | 218 |
| Msa0143710 | AT5G04700.1 | 29.202 | 589 | 302 | 14 | 108 | 594 | 80 | 655 | 9.18e-60 | 211 |
| Msa0143710 | AT5G04680.3 | 28.253 | 584 | 308 | 16 | 108 | 594 | 67 | 636 | 2.55e-52 | 190 |
| Msa0143710 | AT5G04680.4 | 28.020 | 596 | 308 | 16 | 108 | 594 | 67 | 650 | 1.21e-50 | 186 |
| Msa0143710 | AT5G04680.2 | 28.518 | 533 | 262 | 15 | 169 | 594 | 7 | 527 | 4.82e-47 | 173 |
| Msa0143710 | AT5G04730.1 | 29.050 | 537 | 277 | 16 | 156 | 594 | 58 | 588 | 7.19e-47 | 174 |
| Msa0143710 | AT5G04680.1 | 27.083 | 624 | 307 | 21 | 108 | 594 | 67 | 679 | 5.11e-46 | 173 |
| Msa0143710 | AT5G35810.1 | 34.520 | 281 | 145 | 5 | 355 | 598 | 57 | 335 | 2.33e-43 | 159 |
| Msa0143710 | AT3G54065.1 | 39.535 | 172 | 68 | 2 | 422 | 557 | 8 | 179 | 9.85e-33 | 126 |
| Msa0143710 | AT5G04700.2 | 25.063 | 399 | 216 | 11 | 108 | 436 | 80 | 465 | 1.73e-22 | 101 |
| Msa0143710 | AT3G54070.1 | 28.324 | 173 | 111 | 6 | 84 | 250 | 24 | 189 | 4.85e-12 | 67.0 |
| Msa0143710 | AT5G35830.1 | 30.000 | 160 | 101 | 4 | 96 | 250 | 73 | 226 | 7.17e-12 | 67.0 |
Find 147 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCACTTGGCAGGATATTT+AGG | 0.127030 | 1_4:+2745388 | Msa0143710:CDS |
| CCAAAGAATTCAAGAGTTTA+AGG | 0.157617 | 1_4:+2745111 | Msa0143710:CDS |
| TTCACTTGCTATGCTCTTAA+AGG | 0.220345 | 1_4:+2746396 | Msa0143710:CDS |
| CCTTAAACTCTTGAATTCTT+TGG | 0.238324 | 1_4:-2745111 | None:intergenic |
| TAAAGAAGCCTGGAATAAAT+TGG | 0.241875 | 1_4:+2742028 | Msa0143710:CDS |
| ATACATGATGCAACTGTAAA+TGG | 0.242921 | 1_4:+2745316 | Msa0143710:CDS |
| TTAGAACGCGCACCAATTTC+AGG | 0.251761 | 1_4:-2741900 | None:intergenic |
| CTTCGCTATATTCGTGTTTC+CGG | 0.254247 | 1_4:-2743178 | None:intergenic |
| AATATATTCCACATCCTCTA+TGG | 0.260429 | 1_4:+2743017 | Msa0143710:CDS |
| GTGACCTCTATTCCTGAAAT+TGG | 0.292763 | 1_4:+2741888 | Msa0143710:CDS |
| TATATACCTTGCTCAATATC+TGG | 0.305429 | 1_4:-2742083 | None:intergenic |
| TGCACTTGGCAGGATATTTA+GGG | 0.308043 | 1_4:+2745389 | Msa0143710:CDS |
| TTTCCAAGTGGTAGTGGATA+TGG | 0.311953 | 1_4:+2743611 | Msa0143710:CDS |
| ACTTCGGTCCTTCTCTTCAT+TGG | 0.319322 | 1_4:+2746256 | Msa0143710:CDS |
| AATTGTATCCATCAGGAATA+AGG | 0.321064 | 1_4:+2745029 | Msa0143710:intron |
| CTTCACGTTGCGGTAGTTGC+TGG | 0.322177 | 1_4:+2743051 | Msa0143710:CDS |
| CTAAGACTGAATATGAGATT+TGG | 0.338368 | 1_4:+2741919 | Msa0143710:CDS |
| CGAGGAAATTGTGAAGAAAT+TGG | 0.372095 | 1_4:+2743077 | Msa0143710:CDS |
| ATGCAAACTCGTTTATTAAG+AGG | 0.378242 | 1_4:+2742983 | Msa0143710:CDS |
| AACAGGGATTTCACCATCAT+TGG | 0.379563 | 1_4:-2743259 | None:intergenic |
| TGTTCTTCTTGCTGCTGCTA+AGG | 0.379583 | 1_4:+2743278 | Msa0143710:CDS |
| TGGTGAAAGCTGGGGAGAAA+TGG | 0.379583 | 1_4:+2746053 | Msa0143710:CDS |
| GATAAGTAATAAGTTTCAAT+TGG | 0.388393 | 1_4:-2746530 | None:intergenic |
| AGTTGCACCCAATTTATTCC+AGG | 0.399506 | 1_4:-2742036 | None:intergenic |
| CACAAGGAGCTGGTGAAAGC+TGG | 0.403742 | 1_4:+2746043 | Msa0143710:intron |
| GCTGCAGCTTTCACTGTCCC+TGG | 0.408383 | 1_4:+2746136 | Msa0143710:CDS |
| TTAGCAGCAGCAAGAAGAAC+AGG | 0.410668 | 1_4:-2743276 | None:intergenic |
| TAGAAACCACAGAGAAGAAA+AGG | 0.416389 | 1_4:-2746354 | None:intergenic |
| TTCCAAGTGGTAGTGGATAT+GGG | 0.416844 | 1_4:+2743612 | Msa0143710:CDS |
| AAATGCCGTGTAGACGCATT+TGG | 0.419337 | 1_4:+2745355 | Msa0143710:CDS |
| AATTCCATGTTGCACTTGGC+AGG | 0.419647 | 1_4:+2745379 | Msa0143710:CDS |
| ATCAGAACTTAGAGAGGCTT+CGG | 0.421195 | 1_4:+2745135 | Msa0143710:CDS |
| CTAATATGAGTAAGATTCTC+TGG | 0.424630 | 1_4:-2741990 | None:intergenic |
| TCACTTGCTATGCTCTTAAA+GGG | 0.427681 | 1_4:+2746397 | Msa0143710:CDS |
| CATTGGTCTTCATAGATAAC+AGG | 0.427879 | 1_4:-2743242 | None:intergenic |
| ACCTTAGTGGCAATGACTTA+AGG | 0.429666 | 1_4:-2746312 | None:intergenic |
| AGATGCAAAGAGAAATTCTA+TGG | 0.430747 | 1_4:+2745452 | Msa0143710:CDS |
| TTCACGTTGCGGTAGTTGCT+GGG | 0.432176 | 1_4:+2743052 | Msa0143710:CDS |
| TCTCTTTGCATCTGCATAGC+AGG | 0.438079 | 1_4:-2745442 | None:intergenic |
| GAGATTTGGAACAGGAAGAA+TGG | 0.441267 | 1_4:+2741933 | Msa0143710:CDS |
| CCACAAATCACACTTTGAAT+CGG | 0.443086 | 1_4:+2743544 | Msa0143710:CDS |
| TCTGTGTTTCCAAGTGGTAG+TGG | 0.443413 | 1_4:+2743605 | Msa0143710:CDS |
| CTGAATATGAGATTTGGAAC+AGG | 0.444534 | 1_4:+2741925 | Msa0143710:CDS |
| GTTCTTCTTGCTGCTGCTAA+GGG | 0.445513 | 1_4:+2743279 | Msa0143710:CDS |
| GACGGAACTAGAACGATAAC+AGG | 0.453839 | 1_4:-2746463 | None:intergenic |
| CGATTCAAAGTGTGATTTGT+GGG | 0.456154 | 1_4:-2743543 | None:intergenic |
| TATAGCGAAGTGTATGACTA+TGG | 0.458675 | 1_4:+2743191 | Msa0143710:CDS |
| TCCTTAAGTCATTGCCACTA+AGG | 0.460081 | 1_4:+2746311 | Msa0143710:CDS |
| TCTTGTGGGACATGGTCTGT+GGG | 0.464135 | 1_4:+2741860 | Msa0143710:CDS |
| TTTCAGCGTAACGAGCCGTT+AGG | 0.467061 | 1_4:-2746282 | None:intergenic |
| GTTTATAGATGCAATGAGAA+AGG | 0.467103 | 1_4:+2745201 | Msa0143710:CDS |
| TTGTGGGCAAGAGGCATTTG+AGG | 0.467341 | 1_4:-2743527 | None:intergenic |
| CTTGTTAGAAACTATCTTGT+GGG | 0.467922 | 1_4:+2741846 | Msa0143710:intron |
| ATGCGTGCCAATGCGTATAA+TGG | 0.471182 | 1_4:-2743578 | None:intergenic |
| TGTGCAGCGATTTATATTGA+AGG | 0.474499 | 1_4:-2742933 | None:intergenic |
| TTCATATTGCTAAAGAAGCC+TGG | 0.477292 | 1_4:+2742018 | Msa0143710:CDS |
| AAAGAAGCCTGGAATAAATT+GGG | 0.481257 | 1_4:+2742029 | Msa0143710:CDS |
| ACAAGGAGCTGGTGAAAGCT+GGG | 0.481894 | 1_4:+2746044 | Msa0143710:intron |
| GGTGAAAGCTGGGGAGAAAT+GGG | 0.482292 | 1_4:+2746054 | Msa0143710:CDS |
| AGCTGGTTCATTTACTCTTG+TGG | 0.482801 | 1_4:+2746087 | Msa0143710:CDS |
| AGATTTGGAACAGGAAGAAT+GGG | 0.485550 | 1_4:+2741934 | Msa0143710:CDS |
| TCAGCTCAGCAACAAGAGCT+AGG | 0.486371 | 1_4:-2743155 | None:intergenic |
| CATAGCAAGTGAAGCACAGA+AGG | 0.486804 | 1_4:-2746386 | None:intergenic |
| ATCTTGTGGGACATGGTCTG+TGG | 0.486835 | 1_4:+2741859 | Msa0143710:CDS |
| GTGAAGAAATTGGTGAAGGA+AGG | 0.488215 | 1_4:+2743087 | Msa0143710:CDS |
| TTGCATCTGCATAGCAGGAC+CGG | 0.495069 | 1_4:-2745437 | None:intergenic |
| ATATATTCCACATCCTCTAT+GGG | 0.496055 | 1_4:+2743018 | Msa0143710:CDS |
| TTGTCTTGATTGTTTCCACC+AGG | 0.496117 | 1_4:-2746154 | None:intergenic |
| TTGTACACCGTTGGAAGACC+TGG | 0.502955 | 1_4:+2743332 | Msa0143710:CDS |
| TTTATAGATGCAATGAGAAA+GGG | 0.503030 | 1_4:+2745202 | Msa0143710:CDS |
| ATCATGTATGAGTTCGAAAA+CGG | 0.503307 | 1_4:-2745302 | None:intergenic |
| TGCGATAATTATCATCGGCC+AGG | 0.509460 | 1_4:-2743350 | None:intergenic |
| TGGCAATTCCATGTTGCACT+TGG | 0.511014 | 1_4:+2745375 | Msa0143710:CDS |
| TCTTTACCGTTGTACACCGT+TGG | 0.515694 | 1_4:+2743323 | Msa0143710:CDS |
| TCTGATCTTGATCGTAGATC+CGG | 0.515841 | 1_4:+2745418 | Msa0143710:CDS |
| CGCACCAATTTCAGGAATAG+AGG | 0.521001 | 1_4:-2741892 | None:intergenic |
| CAAGTTGGACTTGAGACATA+GGG | 0.524705 | 1_4:+2739936 | Msa0143710:CDS |
| GCTCTTGTTGCTGAGCTGAC+CGG | 0.526277 | 1_4:+2743159 | Msa0143710:CDS |
| CCGATTCAAAGTGTGATTTG+TGG | 0.526820 | 1_4:-2743544 | None:intergenic |
| TGCAAACTCGTTTATTAAGA+GGG | 0.527286 | 1_4:+2742984 | Msa0143710:CDS |
| TGTGATGTCGTGCAAGAACA+AGG | 0.535047 | 1_4:-2746185 | None:intergenic |
| GAGGCATTTGAGGAAATCGT+TGG | 0.537554 | 1_4:-2743517 | None:intergenic |
| GGTCCTCCCCATAGAGGATG+TGG | 0.539677 | 1_4:-2743025 | None:intergenic |
| AAGAGAAATTCTATGGTTCA+AGG | 0.541072 | 1_4:+2745459 | Msa0143710:CDS |
| TGTGCAACCATTATACGCAT+TGG | 0.543058 | 1_4:+2743571 | Msa0143710:CDS |
| AGTGCGAAAAGTAACCTTAG+TGG | 0.548121 | 1_4:-2746325 | None:intergenic |
| ATGTTGCAAGCAGCAAAGCA+TGG | 0.548691 | 1_4:+2745169 | Msa0143710:CDS |
| AACCCATATCCACTACCACT+TGG | 0.557493 | 1_4:-2743614 | None:intergenic |
| AAGTGTGATTTGTGGGCAAG+AGG | 0.558162 | 1_4:-2743536 | None:intergenic |
| TCTTGTTAGAAACTATCTTG+TGG | 0.559427 | 1_4:+2741845 | Msa0143710:intron |
| GCAAGTTGGACTTGAGACAT+AGG | 0.562622 | 1_4:+2739935 | Msa0143710:CDS |
| AGAAACTATCTTGTGGGACA+TGG | 0.562860 | 1_4:+2741852 | Msa0143710:intron |
| AGAAACCACAGAGAAGAAAA+GGG | 0.563826 | 1_4:-2746353 | None:intergenic |
| ACCTTGCTCAATATCTGGAT+CGG | 0.564323 | 1_4:-2742078 | None:intergenic |
| TGTTGCAAGCAGCAAAGCAT+GGG | 0.564523 | 1_4:+2745170 | Msa0143710:CDS |
| GCTTTAATTTGCAGGTGTGG+TGG | 0.564757 | 1_4:+2742900 | Msa0143710:intron |
| AGAGGAGGTATGTCGCAAGT+TGG | 0.567384 | 1_4:+2739921 | Msa0143710:CDS |
| ACTTGAAAATCTCAAGGAAG+AGG | 0.567742 | 1_4:-2746495 | None:intergenic |
| TAAGGAATCAGAACTTAGAG+AGG | 0.568613 | 1_4:+2745129 | Msa0143710:CDS |
| GCCGATGATAATTATCGCAA+TGG | 0.574637 | 1_4:+2743354 | Msa0143710:CDS |
| TGAAGAAATTGGTGAAGGAA+GGG | 0.574748 | 1_4:+2743088 | Msa0143710:CDS |
| CAGCTCAGCAACAAGAGCTA+GGG | 0.580236 | 1_4:-2743154 | None:intergenic |
| AAATGGGCAAAAGATACAGC+TGG | 0.580445 | 1_4:+2746070 | Msa0143710:CDS |
| TTATCTATGAAGACCAATGA+TGG | 0.582929 | 1_4:+2743246 | Msa0143710:CDS |
| TAAGAAAATATCACGGTCAG+AGG | 0.584733 | 1_4:+2743218 | Msa0143710:CDS |
| TGCGGTAGTTGCTGGGCACG+AGG | 0.589759 | 1_4:+2743059 | Msa0143710:CDS |
| TCTCTTCATTGGAATCCTAA+CGG | 0.591072 | 1_4:+2746267 | Msa0143710:CDS |
| CTGTAGACTTGAAAATCTCA+AGG | 0.594097 | 1_4:-2746501 | None:intergenic |
| GCAGCTTTCACTGTCCCTGG+TGG | 0.601445 | 1_4:+2746139 | Msa0143710:CDS |
| AGGAAGAGGCGCAATTGTGA+CGG | 0.607133 | 1_4:-2746481 | None:intergenic |
| AGTATATTGAGAGCGGTGAG+TGG | 0.609550 | 1_4:+2742956 | Msa0143710:CDS |
| ACCATTGCGATAATTATCAT+CGG | 0.609954 | 1_4:-2743355 | None:intergenic |
| TAGAACGATAACAGGAACAC+TGG | 0.611619 | 1_4:-2746455 | None:intergenic |
| AACTACCGCAACGTGAAGAA+CGG | 0.612033 | 1_4:-2743046 | None:intergenic |
| AATTGCCAAATGCGTCTACA+CGG | 0.612652 | 1_4:-2745360 | None:intergenic |
| TTAGGATTCCAATGAAGAGA+AGG | 0.614556 | 1_4:-2746264 | None:intergenic |
| GCCGATCCAGATATTGAGCA+AGG | 0.614842 | 1_4:+2742077 | Msa0143710:CDS |
| ATGCCTTCTGTGTTTCCAAG+TGG | 0.615562 | 1_4:+2743599 | Msa0143710:CDS |
| TGCAACTGTAAATGGACGGA+AGG | 0.618113 | 1_4:+2745324 | Msa0143710:CDS |
| CTTGTGGGACATGGTCTGTG+GGG | 0.619674 | 1_4:+2741861 | Msa0143710:CDS |
| CTACCACTTGGAAACACAGA+AGG | 0.622603 | 1_4:-2743602 | None:intergenic |
| AAGAACGGTCCTCCCCATAG+AGG | 0.622685 | 1_4:-2743031 | None:intergenic |
| AATTGTGAAGAAATTGGTGA+AGG | 0.625256 | 1_4:+2743083 | Msa0143710:CDS |
| ATATCCTGCCAAGTGCAACA+TGG | 0.627952 | 1_4:-2745383 | None:intergenic |
| AATGCAAACTTTGAGAGAGG+AGG | 0.628075 | 1_4:+2739906 | None:intergenic |
| GGTGGAAACAATCAAGACAA+TGG | 0.629811 | 1_4:+2746157 | Msa0143710:CDS |
| ATGATGCAACTGTAAATGGA+CGG | 0.638038 | 1_4:+2745320 | Msa0143710:CDS |
| CATATCATTCAACTAACATG+TGG | 0.643061 | 1_4:+2741966 | Msa0143710:CDS |
| CAAGGAGCTGGTGAAAGCTG+GGG | 0.651622 | 1_4:+2746045 | Msa0143710:intron |
| TGTCTTGATTGTTTCCACCA+GGG | 0.652150 | 1_4:-2746153 | None:intergenic |
| GAGGACCGTTCTTCACGTTG+CGG | 0.655029 | 1_4:+2743041 | Msa0143710:CDS |
| GTGATGTCGTGCAAGAACAA+GGG | 0.659099 | 1_4:-2746184 | None:intergenic |
| ATTCCACATCCTCTATGGGG+AGG | 0.660094 | 1_4:+2743022 | Msa0143710:CDS |
| TAGCAGCAGCAAGAAGAACA+GGG | 0.665135 | 1_4:-2743275 | None:intergenic |
| TTGGAACAGGAAGAATGGGA+AGG | 0.668429 | 1_4:+2741938 | Msa0143710:CDS |
| TATTTCAAGAGCTACACGGT+AGG | 0.669157 | 1_4:-2745074 | None:intergenic |
| GTGAAAATGAAAGACAATCG+AGG | 0.669964 | 1_4:+2743123 | Msa0143710:CDS |
| TCATCGGCCAGGTCTTCCAA+CGG | 0.671668 | 1_4:-2743339 | None:intergenic |
| TGGTATATAAGAAAATATCA+CGG | 0.677081 | 1_4:+2743211 | Msa0143710:CDS |
| CTACGATCAAGATCAGAGGA+AGG | 0.678354 | 1_4:-2745412 | None:intergenic |
| CTGCACAAGTATATTGAGAG+CGG | 0.680709 | 1_4:+2742949 | Msa0143710:CDS |
| GGATCTACGATCAAGATCAG+AGG | 0.680818 | 1_4:-2745416 | None:intergenic |
| TCAATATTTCAAGAGCTACA+CGG | 0.684421 | 1_4:-2745078 | None:intergenic |
| GGTCTTCCAACGGTGTACAA+CGG | 0.687225 | 1_4:-2743329 | None:intergenic |
| TATATTCCACATCCTCTATG+GGG | 0.688060 | 1_4:+2743019 | Msa0143710:CDS |
| AAGTTGGACTTGAGACATAG+GGG | 0.690927 | 1_4:+2739937 | Msa0143710:CDS |
| AGTTGGACTTGAGACATAGG+GGG | 0.727109 | 1_4:+2739938 | Msa0143710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGCTTATAATTAAAAA+CGG | + | chr1_4:2740372-2740391 | Msa0143710:intron | 10.0% |
| !! | TAATAATTATGTTAGTATAA+TGG | - | chr1_4:2740985-2741004 | None:intergenic | 10.0% |
| !! | TCTTAAATACTTATAATATT+AGG | + | chr1_4:2742814-2742833 | Msa0143710:intron | 10.0% |
| !! | CTTAAATACTTATAATATTA+GGG | + | chr1_4:2742815-2742834 | Msa0143710:intron | 10.0% |
| !! | ACTTTATAAAAGAAATTTAA+AGG | + | chr1_4:2743857-2743876 | Msa0143710:intron | 10.0% |
| !!! | TTTATTTTTGGTTTCATTTT+AGG | + | chr1_4:2740048-2740067 | Msa0143710:intron | 15.0% |
| !!! | TTATTTTTGGTTTCATTTTA+GGG | + | chr1_4:2740049-2740068 | Msa0143710:intron | 15.0% |
| !!! | GAAAGTGTATATATTAATTT+AGG | + | chr1_4:2740614-2740633 | Msa0143710:intron | 15.0% |
| !!! | TTTTATATAGATGATATATG+AGG | + | chr1_4:2740647-2740666 | Msa0143710:intron | 15.0% |
| !! | TTTATATAGATGATATATGA+GGG | + | chr1_4:2740648-2740667 | Msa0143710:intron | 15.0% |
| !!! | TATTTTTTTTTATCAAAGCT+AGG | + | chr1_4:2740843-2740862 | Msa0143710:intron | 15.0% |
| !! | TTATTAAACAGTAAAAGTTT+AGG | + | chr1_4:2742658-2742677 | Msa0143710:intron | 15.0% |
| !!! | ATTCAAATGTACTTATTTTT+GGG | - | chr1_4:2742751-2742770 | None:intergenic | 15.0% |
| !!! | TATTCAAATGTACTTATTTT+TGG | - | chr1_4:2742752-2742771 | None:intergenic | 15.0% |
| !!! | ACTGAATTTTAATTAAATTG+AGG | + | chr1_4:2743428-2743447 | Msa0143710:intron | 15.0% |
| !!! | CTGAATTTTAATTAAATTGA+GGG | + | chr1_4:2743429-2743448 | Msa0143710:intron | 15.0% |
| !! | ATTTAAAGGTGATTTATAAA+AGG | + | chr1_4:2743871-2743890 | Msa0143710:intron | 15.0% |
| !! | TTTAAAGGTGATTTATAAAA+GGG | + | chr1_4:2743872-2743891 | Msa0143710:intron | 15.0% |
| !!! | CAAAAGTTTGTATTTTATAA+AGG | - | chr1_4:2743914-2743933 | None:intergenic | 15.0% |
| !! | TACTTCCAATAATATATTAA+AGG | + | chr1_4:2743990-2744009 | Msa0143710:intron | 15.0% |
| !! | AAACTCCTTTAATATATTAT+TGG | - | chr1_4:2743998-2744017 | None:intergenic | 15.0% |
| !! | TAATTAATTAATCACAAAGA+GGG | - | chr1_4:2744990-2745009 | None:intergenic | 15.0% |
| !! | TTAATTAATTAATCACAAAG+AGG | - | chr1_4:2744991-2745010 | None:intergenic | 15.0% |
| !!! | AAAAACTAAATTTGAAATTC+TGG | + | chr1_4:2745748-2745767 | Msa0143710:intron | 15.0% |
| !! | ATATTTATTAGTTAGCATCA+CGG | - | chr1_4:2740087-2740106 | None:intergenic | 20.0% |
| !! | TGCTTATAATTAAAAACAGA+GGG | - | chr1_4:2740261-2740280 | None:intergenic | 20.0% |
| !! | TTGCTTATAATTAAAAACAG+AGG | - | chr1_4:2740262-2740281 | None:intergenic | 20.0% |
| !!! | ATAAGCAAATTTGACTTTTT+AGG | - | chr1_4:2740274-2740293 | None:intergenic | 20.0% |
| !! | TTTATATCATATCTATCATC+AGG | - | chr1_4:2740436-2740455 | None:intergenic | 20.0% |
| !! | TATATACACTTTCAATTCAT+TGG | - | chr1_4:2740607-2740626 | None:intergenic | 20.0% |
| !! | TTATATAGATGATATATGAG+GGG | + | chr1_4:2740649-2740668 | Msa0143710:intron | 20.0% |
| !! | ATAACTAACTAATTAACTGA+TGG | - | chr1_4:2741108-2741127 | None:intergenic | 20.0% |
| !!! | TTTTTTTCACATTTATTCCA+TGG | - | chr1_4:2741234-2741253 | None:intergenic | 20.0% |
| !!! | AATACTTTGAAAGAAACAAA+GGG | - | chr1_4:2741521-2741540 | None:intergenic | 20.0% |
| !! | ACATATTTAGAAAGACAAAA+TGG | - | chr1_4:2741674-2741693 | None:intergenic | 20.0% |
| !! | TACACATTAATCTATTCTTT+GGG | + | chr1_4:2742124-2742143 | Msa0143710:intron | 20.0% |
| !! | AACTATGTCTAATATGTATA+GGG | - | chr1_4:2742166-2742185 | None:intergenic | 20.0% |
| !! | AAACTATGTCTAATATGTAT+AGG | - | chr1_4:2742167-2742186 | None:intergenic | 20.0% |
| !! | TAGTTTCTAAATGTATTGAA+AGG | + | chr1_4:2742181-2742200 | Msa0143710:intron | 20.0% |
| !!! | ACACTTTATTTATTATCAAG+TGG | - | chr1_4:2742400-2742419 | None:intergenic | 20.0% |
| !!! | CAATAAGGAAAGATTTTTAA+AGG | + | chr1_4:2742553-2742572 | Msa0143710:intron | 20.0% |
| !! | TTATAACTAAGAACAATCAA+CGG | + | chr1_4:2742697-2742716 | Msa0143710:intron | 20.0% |
| !!! | TTTGAATATTGTGATTTTAG+TGG | + | chr1_4:2742764-2742783 | Msa0143710:intron | 20.0% |
| !!! | TTGAATATTGTGATTTTAGT+GGG | + | chr1_4:2742765-2742784 | Msa0143710:intron | 20.0% |
| !!! | CATTTATTTTCCTTACTAAT+TGG | - | chr1_4:2742842-2742861 | None:intergenic | 20.0% |
| !! | CAATTAGTAAGGAAAATAAA+TGG | + | chr1_4:2742840-2742859 | Msa0143710:intron | 20.0% |
| !! | TGGTATATAAGAAAATATCA+CGG | + | chr1_4:2743211-2743230 | Msa0143710:CDS | 20.0% |
| !!! | TTTTACGCATATTTTTTTTC+AGG | + | chr1_4:2744822-2744841 | Msa0143710:intron | 20.0% |
| !!! | TTGTTAATCCTTGTTTAAAT+CGG | + | chr1_4:2744912-2744931 | Msa0143710:intron | 20.0% |
| !! | AATTAATTAATCACAAAGAG+GGG | - | chr1_4:2744989-2745008 | None:intergenic | 20.0% |
| !!! | TCAAATTTAGTTTTTGAAGT+TGG | - | chr1_4:2745743-2745762 | None:intergenic | 20.0% |
| !! | ATACATGACATTTAAATAAG+TGG | + | chr1_4:2745811-2745830 | Msa0143710:intron | 20.0% |
| !! | ATGAATAAGATAATAATGTG+TGG | - | chr1_4:2745869-2745888 | None:intergenic | 20.0% |
| !! | ATAAAAAACTACCCTACTTT+TGG | - | chr1_4:2740033-2740052 | None:intergenic | 25.0% |
| !!! | GTAGGGTAGTTTTTTATTTT+TGG | + | chr1_4:2740036-2740055 | Msa0143710:intron | 25.0% |
| !!! | TTTTATTTCTTCTGACAACA+TGG | + | chr1_4:2740107-2740126 | Msa0143710:intron | 25.0% |
| ! | AACATGGATCTTTAATAAGT+TGG | + | chr1_4:2740123-2740142 | Msa0143710:intron | 25.0% |
| ! | GATGTATGTGATTCATATTA+TGG | - | chr1_4:2740326-2740345 | None:intergenic | 25.0% |
| ! | TTGCTTATAATTAAAAACGG+AGG | + | chr1_4:2740375-2740394 | Msa0143710:intron | 25.0% |
| ! | TGCTTATAATTAAAAACGGA+GGG | + | chr1_4:2740376-2740395 | Msa0143710:intron | 25.0% |
| ! | GATATAAACTTATAATCCAC+AGG | + | chr1_4:2740448-2740467 | Msa0143710:intron | 25.0% |
| ! | ACATTACTCAAATGTTAGAA+TGG | - | chr1_4:2740688-2740707 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTAAAAAGGTTC+AGG | - | chr1_4:2740895-2740914 | None:intergenic | 25.0% |
| !! | AACCTTTTTACAACAAAAAC+TGG | + | chr1_4:2740896-2740915 | Msa0143710:intron | 25.0% |
| ! | ATCTATTGATGAATATTCGT+TGG | + | chr1_4:2741015-2741034 | Msa0143710:intron | 25.0% |
| ! | TTGGAATTTCATTTCTTAAC+AGG | + | chr1_4:2741034-2741053 | Msa0143710:intron | 25.0% |
| !! | TTCTATTAATGGGTAAGTTT+CGG | - | chr1_4:2741300-2741319 | None:intergenic | 25.0% |
| !! | GAATACTTTGAAAGAAACAA+AGG | - | chr1_4:2741522-2741541 | None:intergenic | 25.0% |
| !! | TTCAAAGTATTCTGACTATA+CGG | + | chr1_4:2741530-2741549 | Msa0143710:intron | 25.0% |
| ! | GTACACATTAATCTATTCTT+TGG | + | chr1_4:2742123-2742142 | Msa0143710:intron | 25.0% |
| ! | ATAAATAAAGTGTGTGAATG+AGG | + | chr1_4:2742407-2742426 | Msa0143710:intron | 25.0% |
| ! | ATTGTATGAGATGTTACAAA+TGG | + | chr1_4:2742488-2742507 | Msa0143710:intron | 25.0% |
| !!! | TAAGGAAAGATTTTTAAAGG+AGG | + | chr1_4:2742556-2742575 | Msa0143710:intron | 25.0% |
| ! | AGCTAATGTTTATTAGCAAT+AGG | + | chr1_4:2742580-2742599 | Msa0143710:intron | 25.0% |
| ! | ATGTTTATTAGCAATAGGTA+AGG | + | chr1_4:2742585-2742604 | Msa0143710:intron | 25.0% |
| ! | TGTTTATTAGCAATAGGTAA+GGG | + | chr1_4:2742586-2742605 | Msa0143710:intron | 25.0% |
| ! | TAGTTATAACGCTTAAGATT+GGG | - | chr1_4:2742686-2742705 | None:intergenic | 25.0% |
| ! | TTAGTTATAACGCTTAAGAT+TGG | - | chr1_4:2742687-2742706 | None:intergenic | 25.0% |
| ! | TCGATTCAATATTGTATCTT+AGG | + | chr1_4:2743476-2743495 | Msa0143710:intron | 25.0% |
| ! | AATTTGAAAAGTAAGCGAAA+TGG | - | chr1_4:2743697-2743716 | None:intergenic | 25.0% |
| !!! | ATTTCGCTTACTTTTCAAAT+TGG | + | chr1_4:2743696-2743715 | Msa0143710:intron | 25.0% |
| !!! | TTTCGCTTACTTTTCAAATT+GGG | + | chr1_4:2743697-2743716 | Msa0143710:intron | 25.0% |
| ! | TGCAAACTTATAATGTTACA+CGG | + | chr1_4:2743747-2743766 | Msa0143710:intron | 25.0% |
| ! | AATGAATACTATATGTGTAG+TGG | - | chr1_4:2743960-2743979 | None:intergenic | 25.0% |
| ! | GAGTAAATAATGAATGAGAT+TGG | + | chr1_4:2744222-2744241 | Msa0143710:intron | 25.0% |
| ! | ATGAACACACATATATAACA+GGG | - | chr1_4:2744790-2744809 | None:intergenic | 25.0% |
| ! | TATGAACACACATATATAAC+AGG | - | chr1_4:2744791-2744810 | None:intergenic | 25.0% |
| !!! | CTAATATACCGATTTAAACA+AGG | - | chr1_4:2744923-2744942 | None:intergenic | 25.0% |
| ! | GAATGATTGTACTTACAATA+AGG | - | chr1_4:2744964-2744983 | None:intergenic | 25.0% |
| !! | TATATTTTCCTTATTCCTGA+TGG | - | chr1_4:2745040-2745059 | None:intergenic | 25.0% |
| ! | TTTATAGATGCAATGAGAAA+GGG | + | chr1_4:2745202-2745221 | Msa0143710:CDS | 25.0% |
| ! | GCCATTGATAAAAATAAAAG+AGG | + | chr1_4:2745244-2745263 | Msa0143710:intron | 25.0% |
| !!! | GCCTCTTTTATTTTTATCAA+TGG | - | chr1_4:2745248-2745267 | None:intergenic | 25.0% |
| ! | AATGTCATGTATCTCAAAAT+TGG | - | chr1_4:2745803-2745822 | None:intergenic | 25.0% |
| !! | CATATTGTGAAATTTTGTGA+AGG | + | chr1_4:2745937-2745956 | Msa0143710:intron | 25.0% |
| TCAAATTGGAATTGAGACAT+AGG | + | chr1_4:2739967-2739986 | Msa0143710:intron | 30.0% | |
| CAAATTGGAATTGAGACATA+GGG | + | chr1_4:2739968-2739987 | Msa0143710:intron | 30.0% | |
| AGTGGAAAATATAACTGTTG+CGG | - | chr1_4:2740179-2740198 | None:intergenic | 30.0% | |
| GAAATTCACACAAGATAAAG+TGG | - | chr1_4:2740197-2740216 | None:intergenic | 30.0% | |
| TATAATCCACAGGTCAAATT+TGG | + | chr1_4:2740458-2740477 | Msa0143710:intron | 30.0% | |
| AATGAGACTTGTCAAGATTA+AGG | - | chr1_4:2740816-2740835 | None:intergenic | 30.0% | |
| GGAAAATTAAATTGCAAACC+AGG | + | chr1_4:2740864-2740883 | Msa0143710:intron | 30.0% | |
| !!! | AGATTTGTTTTAGCTGAGTT+TGG | - | chr1_4:2740932-2740951 | None:intergenic | 30.0% |
| ! | TTATCTCTTTTATCCACCTT+GGG | + | chr1_4:2741353-2741372 | Msa0143710:intron | 30.0% |
| !!! | CACTCGGTTTTTAAAGTTTA+AGG | + | chr1_4:2741569-2741588 | Msa0143710:intron | 30.0% |
| TCTTGTTAGAAACTATCTTG+TGG | + | chr1_4:2741845-2741864 | Msa0143710:intron | 30.0% | |
| CTTGTTAGAAACTATCTTGT+GGG | + | chr1_4:2741846-2741865 | Msa0143710:intron | 30.0% | |
| CTAAGACTGAATATGAGATT+TGG | + | chr1_4:2741919-2741938 | Msa0143710:CDS | 30.0% | |
| CATATCATTCAACTAACATG+TGG | + | chr1_4:2741966-2741985 | Msa0143710:CDS | 30.0% | |
| CTAATATGAGTAAGATTCTC+TGG | - | chr1_4:2741993-2742012 | None:intergenic | 30.0% | |
| TAAAGAAGCCTGGAATAAAT+TGG | + | chr1_4:2742028-2742047 | Msa0143710:CDS | 30.0% | |
| AAAGAAGCCTGGAATAAATT+GGG | + | chr1_4:2742029-2742048 | Msa0143710:CDS | 30.0% | |
| TATATACCTTGCTCAATATC+TGG | - | chr1_4:2742086-2742105 | None:intergenic | 30.0% | |
| TGAGATGTTACAAATGGTAT+TGG | + | chr1_4:2742494-2742513 | Msa0143710:intron | 30.0% | |
| AGTTATAACGCTTAAGATTG+GGG | - | chr1_4:2742685-2742704 | None:intergenic | 30.0% | |
| ATATTAGGGTCCAATTAGTA+AGG | + | chr1_4:2742829-2742848 | Msa0143710:intron | 30.0% | |
| !! | ACATACATGCTTTAATTTGC+AGG | + | chr1_4:2742892-2742911 | Msa0143710:intron | 30.0% |
| ATGCAAACTCGTTTATTAAG+AGG | + | chr1_4:2742983-2743002 | Msa0143710:CDS | 30.0% | |
| TGCAAACTCGTTTATTAAGA+GGG | + | chr1_4:2742984-2743003 | Msa0143710:CDS | 30.0% | |
| AATATATTCCACATCCTCTA+TGG | + | chr1_4:2743017-2743036 | Msa0143710:CDS | 30.0% | |
| ATATATTCCACATCCTCTAT+GGG | + | chr1_4:2743018-2743037 | Msa0143710:CDS | 30.0% | |
| AATTGTGAAGAAATTGGTGA+AGG | + | chr1_4:2743083-2743102 | Msa0143710:CDS | 30.0% | |
| TTATCTATGAAGACCAATGA+TGG | + | chr1_4:2743246-2743265 | Msa0143710:CDS | 30.0% | |
| ACCATTGCGATAATTATCAT+CGG | - | chr1_4:2743358-2743377 | None:intergenic | 30.0% | |
| TGTATCACTGCAGAAATATT+TGG | + | chr1_4:2743396-2743415 | Msa0143710:intron | 30.0% | |
| TCAATATTGTATCTTAGGTG+TGG | + | chr1_4:2743481-2743500 | Msa0143710:intron | 30.0% | |
| GGAGATGTTAAATTAAGTGT+TGG | - | chr1_4:2743939-2743958 | None:intergenic | 30.0% | |
| ! | AGAGTTTTACATGATCTGTT+TGG | + | chr1_4:2744031-2744050 | Msa0143710:intron | 30.0% |
| TACATGATCTGTTTGGAAAT+TGG | + | chr1_4:2744038-2744057 | Msa0143710:intron | 30.0% | |
| ! | AGTGAAGTTTGATGAGTTTT+TGG | - | chr1_4:2744111-2744130 | None:intergenic | 30.0% |
| AGACCAACTTTACAAAATTG+AGG | + | chr1_4:2744154-2744173 | Msa0143710:intron | 30.0% | |
| ! | ACTCCTCAATTTTGTAAAGT+TGG | - | chr1_4:2744160-2744179 | None:intergenic | 30.0% |
| !! | GAGTATCGTTCCAATTTTAT+CGG | + | chr1_4:2744176-2744195 | Msa0143710:intron | 30.0% |
| GGTAATCTCAAAACTAAAAG+CGG | - | chr1_4:2744331-2744350 | None:intergenic | 30.0% | |
| !! | AGAGAAGTGCATGAATTTTA+CGG | + | chr1_4:2744355-2744374 | Msa0143710:intron | 30.0% |
| !!! | TTTGTGTTGTTTTTCCTCTT+TGG | - | chr1_4:2744407-2744426 | None:intergenic | 30.0% |
| !! | AAGCTCTAGAAAGAAGAATT+AGG | - | chr1_4:2744460-2744479 | None:intergenic | 30.0% |
| ! | GTTTTTCTACAATATGCGAA+TGG | + | chr1_4:2744499-2744518 | Msa0143710:intron | 30.0% |
| CTGAGGATTATTAATCTTCT+CGG | + | chr1_4:2744527-2744546 | Msa0143710:intron | 30.0% | |
| ! | TCACATGTCATTTCAGAATT+CGG | + | chr1_4:2744863-2744882 | Msa0143710:intron | 30.0% |
| ! | TTATTCCTGATGGATACAAT+TGG | - | chr1_4:2745030-2745049 | None:intergenic | 30.0% |
| AATTGTATCCATCAGGAATA+AGG | + | chr1_4:2745029-2745048 | Msa0143710:intron | 30.0% | |
| TCAATATTTCAAGAGCTACA+CGG | - | chr1_4:2745081-2745100 | None:intergenic | 30.0% | |
| CCTTAAACTCTTGAATTCTT+TGG | - | chr1_4:2745114-2745133 | None:intergenic | 30.0% | |
| CCAAAGAATTCAAGAGTTTA+AGG | + | chr1_4:2745111-2745130 | Msa0143710:CDS | 30.0% | |
| GTTTATAGATGCAATGAGAA+AGG | + | chr1_4:2745201-2745220 | Msa0143710:CDS | 30.0% | |
| ATCATGTATGAGTTCGAAAA+CGG | - | chr1_4:2745305-2745324 | None:intergenic | 30.0% | |
| ATACATGATGCAACTGTAAA+TGG | + | chr1_4:2745316-2745335 | Msa0143710:CDS | 30.0% | |
| AGATGCAAAGAGAAATTCTA+TGG | + | chr1_4:2745452-2745471 | Msa0143710:CDS | 30.0% | |
| AAGAGAAATTCTATGGTTCA+AGG | + | chr1_4:2745459-2745478 | Msa0143710:CDS | 30.0% | |
| TTTCACAATATGTTATAGCG+CGG | - | chr1_4:2745929-2745948 | None:intergenic | 30.0% | |
| !!! | TTTTTTGCTTCCTTACACTT+GGG | - | chr1_4:2745983-2746002 | None:intergenic | 30.0% |
| !!! | ATTTTTTGCTTCCTTACACT+TGG | - | chr1_4:2745984-2746003 | None:intergenic | 30.0% |
| ! | TCTTTTCACTTCTTCAACTT+CGG | + | chr1_4:2746240-2746259 | Msa0143710:CDS | 30.0% |
| AAAATATAACTGTTGCGGGA+CGG | - | chr1_4:2740174-2740193 | None:intergenic | 35.0% | |
| GTGGAAAATATAACTGTTGC+GGG | - | chr1_4:2740178-2740197 | None:intergenic | 35.0% | |
| TACTTTCCAAATTTGACCTG+TGG | - | chr1_4:2740467-2740486 | None:intergenic | 35.0% | |
| ACATTGATGTAGCGTTACAT+CGG | + | chr1_4:2740518-2740537 | Msa0143710:intron | 35.0% | |
| !! | GGCCAGTTTTTGTTGTAAAA+AGG | - | chr1_4:2740901-2740920 | None:intergenic | 35.0% |
| ! | CTTATCTCTTTTATCCACCT+TGG | + | chr1_4:2741352-2741371 | Msa0143710:intron | 35.0% |
| !! | CTGTAAGTTTGACTCGATTT+TGG | + | chr1_4:2741415-2741434 | Msa0143710:intron | 35.0% |
| AAAGAAACAAAGGGAGCAAA+CGG | - | chr1_4:2741512-2741531 | None:intergenic | 35.0% | |
| GAAAACGATTATAGTGTCAG+TGG | - | chr1_4:2741621-2741640 | None:intergenic | 35.0% | |
| ! | CTGAATATGAGATTTGGAAC+AGG | + | chr1_4:2741925-2741944 | Msa0143710:CDS | 35.0% |
| ! | AGATTTGGAACAGGAAGAAT+GGG | + | chr1_4:2741934-2741953 | Msa0143710:CDS | 35.0% |
| TTCATATTGCTAAAGAAGCC+TGG | + | chr1_4:2742018-2742037 | Msa0143710:CDS | 35.0% | |
| ! | TAAGTGTCTTTTGTGAGTCA+TGG | + | chr1_4:2742217-2742236 | Msa0143710:intron | 35.0% |
| ATTAAGTCCTGTCTCATAGT+CGG | - | chr1_4:2742249-2742268 | None:intergenic | 35.0% | |
| AAGAACAATCAACGGCATTT+AGG | + | chr1_4:2742705-2742724 | Msa0143710:intron | 35.0% | |
| TGTGCAGCGATTTATATTGA+AGG | - | chr1_4:2742936-2742955 | None:intergenic | 35.0% | |
| TATATTCCACATCCTCTATG+GGG | + | chr1_4:2743019-2743038 | Msa0143710:CDS | 35.0% | |
| CGAGGAAATTGTGAAGAAAT+TGG | + | chr1_4:2743077-2743096 | Msa0143710:CDS | 35.0% | |
| TGAAGAAATTGGTGAAGGAA+GGG | + | chr1_4:2743088-2743107 | Msa0143710:CDS | 35.0% | |
| GTGAAAATGAAAGACAATCG+AGG | + | chr1_4:2743123-2743142 | Msa0143710:CDS | 35.0% | |
| TATAGCGAAGTGTATGACTA+TGG | + | chr1_4:2743191-2743210 | Msa0143710:CDS | 35.0% | |
| TAAGAAAATATCACGGTCAG+AGG | + | chr1_4:2743218-2743237 | Msa0143710:CDS | 35.0% | |
| !! | CATTGGTCTTCATAGATAAC+AGG | - | chr1_4:2743245-2743264 | None:intergenic | 35.0% |
| ! | CGATTCAAAGTGTGATTTGT+GGG | - | chr1_4:2743546-2743565 | None:intergenic | 35.0% |
| CCACAAATCACACTTTGAAT+CGG | + | chr1_4:2743544-2743563 | Msa0143710:CDS | 35.0% | |
| ! | CTTTTCAAATTGGGTCATCT+CGG | + | chr1_4:2743706-2743725 | Msa0143710:intron | 35.0% |
| AATTCATGCACTTCTCTTTC+AGG | - | chr1_4:2744352-2744371 | None:intergenic | 35.0% | |
| !! | GAGAAGTGCATGAATTTTAC+GGG | + | chr1_4:2744356-2744375 | Msa0143710:intron | 35.0% |
| TCTTGCAAATATTGCCAAAG+AGG | + | chr1_4:2744390-2744409 | Msa0143710:intron | 35.0% | |
| !! | ATCTTCTCGGTTGTTTCTTT+AGG | + | chr1_4:2744540-2744559 | Msa0143710:intron | 35.0% |
| ! | GTTTCTTTAGGAAGGTTATG+TGG | + | chr1_4:2744552-2744571 | Msa0143710:intron | 35.0% |
| AAGATCACAGATCACAACAA+GGG | - | chr1_4:2744692-2744711 | None:intergenic | 35.0% | |
| AAAGATCACAGATCACAACA+AGG | - | chr1_4:2744693-2744712 | None:intergenic | 35.0% | |
| TCGGTACTATTAAAGTTCTC+TGG | + | chr1_4:2744882-2744901 | Msa0143710:intron | 35.0% | |
| TAATTAATCACAAAGAGGGG+AGG | - | chr1_4:2744986-2745005 | None:intergenic | 35.0% | |
| TAAGGAATCAGAACTTAGAG+AGG | + | chr1_4:2745129-2745148 | Msa0143710:CDS | 35.0% | |
| ! | TTTTATCAATGGCCCATAAG+AGG | - | chr1_4:2745237-2745256 | None:intergenic | 35.0% |
| ATGATGCAACTGTAAATGGA+CGG | + | chr1_4:2745320-2745339 | Msa0143710:CDS | 35.0% | |
| GCTTATATGTTGGAACAAAG+AGG | + | chr1_4:2745538-2745557 | Msa0143710:intron | 35.0% | |
| GAGAAGAGATTAGAGAGTTT+AGG | + | chr1_4:2745599-2745618 | Msa0143710:intron | 35.0% | |
| GTTGGTTGTGAAGTTGTTAT+AGG | - | chr1_4:2745725-2745744 | None:intergenic | 35.0% | |
| TATAGCGCGGTTAAAATTCA+TGG | - | chr1_4:2745916-2745935 | None:intergenic | 35.0% | |
| ! | TTTTTGCTTCCTTACACTTG+GGG | - | chr1_4:2745982-2746001 | None:intergenic | 35.0% |
| TTAGGATTCCAATGAAGAGA+AGG | - | chr1_4:2746267-2746286 | None:intergenic | 35.0% | |
| TCTCTTCATTGGAATCCTAA+CGG | + | chr1_4:2746267-2746286 | Msa0143710:CDS | 35.0% | |
| AGAAACCACAGAGAAGAAAA+GGG | - | chr1_4:2746356-2746375 | None:intergenic | 35.0% | |
| TAGAAACCACAGAGAAGAAA+AGG | - | chr1_4:2746357-2746376 | None:intergenic | 35.0% | |
| !! | TTCACTTGCTATGCTCTTAA+AGG | + | chr1_4:2746396-2746415 | Msa0143710:CDS | 35.0% |
| !! | TCACTTGCTATGCTCTTAAA+GGG | + | chr1_4:2746397-2746416 | Msa0143710:CDS | 35.0% |
| ACTTGAAAATCTCAAGGAAG+AGG | - | chr1_4:2746498-2746517 | None:intergenic | 35.0% | |
| CTGTAGACTTGAAAATCTCA+AGG | - | chr1_4:2746504-2746523 | None:intergenic | 35.0% | |
| ! | CAAGTTGGACTTGAGACATA+GGG | + | chr1_4:2739936-2739955 | Msa0143710:CDS | 40.0% |
| AAGTTGGACTTGAGACATAG+GGG | + | chr1_4:2739937-2739956 | Msa0143710:CDS | 40.0% | |
| ! | ATAGGGGGTATGTCTCAAAT+TGG | + | chr1_4:2739953-2739972 | Msa0143710:intron | 40.0% |
| ACATAGGGTATGTCTCAAGT+TGG | + | chr1_4:2739983-2740002 | Msa0143710:intron | 40.0% | |
| !! | TCAAGTTGGACTTGAGACAT+AGG | + | chr1_4:2739997-2740016 | Msa0143710:intron | 40.0% |
| ! | CAAGTTGGACTTGAGACATA+GGG | + | chr1_4:2739936-2739955 | Msa0143710:CDS | 40.0% |
| AAGTTGGACTTGAGACATAG+GGG | + | chr1_4:2739937-2739956 | Msa0143710:CDS | 40.0% | |
| GGGTCAACTTTCCAAAAGTA+GGG | + | chr1_4:2740019-2740038 | Msa0143710:intron | 40.0% | |
| AAATATAACTGTTGCGGGAC+GGG | - | chr1_4:2740173-2740192 | None:intergenic | 40.0% | |
| TAGCTGAGTTTGGTCATAGT+TGG | - | chr1_4:2740922-2740941 | None:intergenic | 40.0% | |
| TTAACAGGCGACGATGATTT+GGG | + | chr1_4:2741049-2741068 | Msa0143710:intron | 40.0% | |
| TAGGATTGATGAGAGAGGAT+GGG | - | chr1_4:2741186-2741205 | None:intergenic | 40.0% | |
| ATAGGATTGATGAGAGAGGA+TGG | - | chr1_4:2741187-2741206 | None:intergenic | 40.0% | |
| TCTCTCATCAATCCTATGTC+CGG | + | chr1_4:2741190-2741209 | Msa0143710:intron | 40.0% | |
| ! | TCTTTTATCCACCTTGGGTT+TGG | + | chr1_4:2741358-2741377 | Msa0143710:intron | 40.0% |
| CTAAACTATGTCCAAACCCA+AGG | - | chr1_4:2741372-2741391 | None:intergenic | 40.0% | |
| ! | TGCTCTAACTTTTCTCACGT+TGG | + | chr1_4:2741438-2741457 | Msa0143710:intron | 40.0% |
| TGGAACAAGAGAAAGCAACA+TGG | - | chr1_4:2741654-2741673 | None:intergenic | 40.0% | |
| TTCTACTGCTTCACAATCTG+TGG | - | chr1_4:2741749-2741768 | None:intergenic | 40.0% | |
| TTGTGAAGCAGTAGAATGAC+AGG | + | chr1_4:2741753-2741772 | Msa0143710:intron | 40.0% | |
| ! | CCAGTTTTCGTAGTTGTCTT+TGG | - | chr1_4:2741820-2741839 | None:intergenic | 40.0% |
| CCAAAGACAACTACGAAAAC+TGG | + | chr1_4:2741817-2741836 | Msa0143710:intron | 40.0% | |
| AGAAACTATCTTGTGGGACA+TGG | + | chr1_4:2741852-2741871 | Msa0143710:intron | 40.0% | |
| GTGACCTCTATTCCTGAAAT+TGG | + | chr1_4:2741888-2741907 | Msa0143710:CDS | 40.0% | |
| ! | GAGATTTGGAACAGGAAGAA+TGG | + | chr1_4:2741933-2741952 | Msa0143710:CDS | 40.0% |
| AGTTGCACCCAATTTATTCC+AGG | - | chr1_4:2742039-2742058 | None:intergenic | 40.0% | |
| ACCTTGCTCAATATCTGGAT+CGG | - | chr1_4:2742081-2742100 | None:intergenic | 40.0% | |
| !! | AAAAGAATCGTGTTGACTCG+TGG | + | chr1_4:2742443-2742462 | Msa0143710:intron | 40.0% |
| !! | AAAGAATCGTGTTGACTCGT+GGG | + | chr1_4:2742444-2742463 | Msa0143710:intron | 40.0% |
| TAGGTAAGGGAGAAGCAATA+AGG | + | chr1_4:2742599-2742618 | Msa0143710:intron | 40.0% | |
| AATCAACGGCATTTAGGCTT+TGG | + | chr1_4:2742711-2742730 | Msa0143710:intron | 40.0% | |
| ATCAACGGCATTTAGGCTTT+GGG | + | chr1_4:2742712-2742731 | Msa0143710:intron | 40.0% | |
| !! | CATGCTTTAATTTGCAGGTG+TGG | + | chr1_4:2742897-2742916 | Msa0143710:intron | 40.0% |
| CTGCACAAGTATATTGAGAG+CGG | + | chr1_4:2742949-2742968 | Msa0143710:CDS | 40.0% | |
| GTGAAGAAATTGGTGAAGGA+AGG | + | chr1_4:2743087-2743106 | Msa0143710:CDS | 40.0% | |
| CTTCGCTATATTCGTGTTTC+CGG | - | chr1_4:2743181-2743200 | None:intergenic | 40.0% | |
| AACAGGGATTTCACCATCAT+TGG | - | chr1_4:2743262-2743281 | None:intergenic | 40.0% | |
| GCCGATGATAATTATCGCAA+TGG | + | chr1_4:2743354-2743373 | Msa0143710:CDS | 40.0% | |
| ! | CTGCAGAAATATTTGGTTCG+TGG | + | chr1_4:2743403-2743422 | Msa0143710:intron | 40.0% |
| CCGATTCAAAGTGTGATTTG+TGG | - | chr1_4:2743547-2743566 | None:intergenic | 40.0% | |
| TGTGCAACCATTATACGCAT+TGG | + | chr1_4:2743571-2743590 | Msa0143710:CDS | 40.0% | |
| !! | TTTCCAAGTGGTAGTGGATA+TGG | + | chr1_4:2743611-2743630 | Msa0143710:CDS | 40.0% |
| !! | TTCCAAGTGGTAGTGGATAT+GGG | + | chr1_4:2743612-2743631 | Msa0143710:CDS | 40.0% |
| TTACTCCTCAATTGTCCCTT+CGG | - | chr1_4:2744208-2744227 | None:intergenic | 40.0% | |
| !! | AAGCGGAAGTAGATTAGTCT+TGG | - | chr1_4:2744314-2744333 | None:intergenic | 40.0% |
| CAACACAAAGCTTCTTTCGT+AGG | + | chr1_4:2744418-2744437 | Msa0143710:intron | 40.0% | |
| CAAAGCTTCTTTCGTAGGTA+TGG | + | chr1_4:2744423-2744442 | Msa0143710:intron | 40.0% | |
| !! | TCTCGGTTGTTTCTTTAGGA+AGG | + | chr1_4:2744544-2744563 | Msa0143710:intron | 40.0% |
| ! | CTTTAGGAAGGTTATGTGGA+CGG | + | chr1_4:2744556-2744575 | Msa0143710:intron | 40.0% |
| TTTATCGCCAGTAAAGCAGT+TGG | + | chr1_4:2744587-2744606 | Msa0143710:intron | 40.0% | |
| TTATCGCCAGTAAAGCAGTT+GGG | + | chr1_4:2744588-2744607 | Msa0143710:intron | 40.0% | |
| AACTTACCCAACTGCTTTAC+TGG | - | chr1_4:2744597-2744616 | None:intergenic | 40.0% | |
| TCTGGATTACAAGACGTATC+CGG | - | chr1_4:2744740-2744759 | None:intergenic | 40.0% | |
| TCTTGTAATCCAGACCCTAA+GGG | + | chr1_4:2744746-2744765 | Msa0143710:intron | 40.0% | |
| GCTTTGTATTCACACCCTTA+GGG | - | chr1_4:2744763-2744782 | None:intergenic | 40.0% | |
| CACACATATATAACAGGGAC+TGG | - | chr1_4:2744785-2744804 | None:intergenic | 40.0% | |
| ! | TCCTGATGGATACAATTGGA+GGG | - | chr1_4:2745026-2745045 | None:intergenic | 40.0% |
| ! | TTCCTGATGGATACAATTGG+AGG | - | chr1_4:2745027-2745046 | None:intergenic | 40.0% |
| TATTTCAAGAGCTACACGGT+AGG | - | chr1_4:2745077-2745096 | None:intergenic | 40.0% | |
| ATCAGAACTTAGAGAGGCTT+CGG | + | chr1_4:2745135-2745154 | Msa0143710:CDS | 40.0% | |
| ! | GTTCGAAAACGGCTTTTCTA+CGG | - | chr1_4:2745294-2745313 | None:intergenic | 40.0% |
| AATTGCCAAATGCGTCTACA+CGG | - | chr1_4:2745363-2745382 | None:intergenic | 40.0% | |
| TTGCACTTGGCAGGATATTT+AGG | + | chr1_4:2745388-2745407 | Msa0143710:CDS | 40.0% | |
| TGCACTTGGCAGGATATTTA+GGG | + | chr1_4:2745389-2745408 | Msa0143710:CDS | 40.0% | |
| TCTGATCTTGATCGTAGATC+CGG | + | chr1_4:2745418-2745437 | Msa0143710:CDS | 40.0% | |
| ! | GTGAAATTTTGTGAAGGCAG+TGG | + | chr1_4:2745943-2745962 | Msa0143710:intron | 40.0% |
| ! | AAATTTTGTGAAGGCAGTGG+AGG | + | chr1_4:2745946-2745965 | Msa0143710:intron | 40.0% |
| CTTTCTGTAAATAGCTCACG+AGG | - | chr1_4:2746022-2746041 | None:intergenic | 40.0% | |
| GCTATTTACAGAAAGCCACA+AGG | + | chr1_4:2746027-2746046 | Msa0143710:intron | 40.0% | |
| AAATGGGCAAAAGATACAGC+TGG | + | chr1_4:2746070-2746089 | Msa0143710:CDS | 40.0% | |
| ! | AGCTGGTTCATTTACTCTTG+TGG | + | chr1_4:2746087-2746106 | Msa0143710:CDS | 40.0% |
| TGTCTTGATTGTTTCCACCA+GGG | - | chr1_4:2746156-2746175 | None:intergenic | 40.0% | |
| TTGTCTTGATTGTTTCCACC+AGG | - | chr1_4:2746157-2746176 | None:intergenic | 40.0% | |
| GGTGGAAACAATCAAGACAA+TGG | + | chr1_4:2746157-2746176 | Msa0143710:CDS | 40.0% | |
| TCCTTAAGTCATTGCCACTA+AGG | + | chr1_4:2746311-2746330 | Msa0143710:CDS | 40.0% | |
| ACCTTAGTGGCAATGACTTA+AGG | - | chr1_4:2746315-2746334 | None:intergenic | 40.0% | |
| AGTGCGAAAAGTAACCTTAG+TGG | - | chr1_4:2746328-2746347 | None:intergenic | 40.0% | |
| TAGAACGATAACAGGAACAC+TGG | - | chr1_4:2746458-2746477 | None:intergenic | 40.0% | |
| ! | GCAAGTTGGACTTGAGACAT+AGG | + | chr1_4:2739935-2739954 | Msa0143710:CDS | 45.0% |
| AGTTGGACTTGAGACATAGG+GGG | + | chr1_4:2739938-2739957 | Msa0143710:CDS | 45.0% | |
| GGGGTCAACTTTCCAAAAGT+AGG | + | chr1_4:2740018-2740037 | Msa0143710:intron | 45.0% | |
| AATATAACTGTTGCGGGACG+GGG | - | chr1_4:2740172-2740191 | None:intergenic | 45.0% | |
| AAAAAGGTTCAGGCATCTCC+TGG | - | chr1_4:2740885-2740904 | None:intergenic | 45.0% | |
| CTTAACAGGCGACGATGATT+TGG | + | chr1_4:2741048-2741067 | Msa0143710:intron | 45.0% | |
| GGACATAGGATTGATGAGAG+AGG | - | chr1_4:2741191-2741210 | None:intergenic | 45.0% | |
| TGTCTCATAACACCGGACAT+AGG | - | chr1_4:2741205-2741224 | None:intergenic | 45.0% | |
| !! | ATGTCCGGTGTTATGAGACA+TGG | + | chr1_4:2741205-2741224 | Msa0143710:intron | 45.0% |
| GATGCCATGTCTCATAACAC+CGG | - | chr1_4:2741212-2741231 | None:intergenic | 45.0% | |
| GTTATGAGACATGGCATCCA+TGG | + | chr1_4:2741214-2741233 | Msa0143710:intron | 45.0% | |
| AACTATGTCCAAACCCAAGG+TGG | - | chr1_4:2741369-2741388 | None:intergenic | 45.0% | |
| AACAAAGGGAGCAAACGGAT+TGG | - | chr1_4:2741507-2741526 | None:intergenic | 45.0% | |
| AAACTGAGCACTCACACACT+CGG | + | chr1_4:2741553-2741572 | Msa0143710:intron | 45.0% | |
| TCGTAGTTGTCTTTGGTCAG+TGG | - | chr1_4:2741813-2741832 | None:intergenic | 45.0% | |
| CGCACCAATTTCAGGAATAG+AGG | - | chr1_4:2741895-2741914 | None:intergenic | 45.0% | |
| TTAGAACGCGCACCAATTTC+AGG | - | chr1_4:2741903-2741922 | None:intergenic | 45.0% | |
| TTGGAACAGGAAGAATGGGA+AGG | + | chr1_4:2741938-2741957 | Msa0143710:CDS | 45.0% | |
| GACTAAACCGACTATGAGAC+AGG | + | chr1_4:2742239-2742258 | Msa0143710:intron | 45.0% | |
| !! | AAGAATCGTGTTGACTCGTG+GGG | + | chr1_4:2742445-2742464 | Msa0143710:intron | 45.0% |
| AAACCTCTCCCAAGATGATG+TGG | + | chr1_4:2742517-2742536 | Msa0143710:intron | 45.0% | |
| AAACCACATCATCTTGGGAG+AGG | - | chr1_4:2742523-2742542 | None:intergenic | 45.0% | |
| TCTCCCAAGATGATGTGGTT+TGG | + | chr1_4:2742522-2742541 | Msa0143710:intron | 45.0% | |
| CTCCCAAGATGATGTGGTTT+GGG | + | chr1_4:2742523-2742542 | Msa0143710:intron | 45.0% | |
| TCCCAAGATGATGTGGTTTG+GGG | + | chr1_4:2742524-2742543 | Msa0143710:intron | 45.0% | |
| TCCCCAAACCACATCATCTT+GGG | - | chr1_4:2742528-2742547 | None:intergenic | 45.0% | |
| !! | GCTTTAATTTGCAGGTGTGG+TGG | + | chr1_4:2742900-2742919 | Msa0143710:intron | 45.0% |
| AGTATATTGAGAGCGGTGAG+TGG | + | chr1_4:2742956-2742975 | Msa0143710:CDS | 45.0% | |
| AACTACCGCAACGTGAAGAA+CGG | - | chr1_4:2743049-2743068 | None:intergenic | 45.0% | |
| TAGCAGCAGCAAGAAGAACA+GGG | - | chr1_4:2743278-2743297 | None:intergenic | 45.0% | |
| TTAGCAGCAGCAAGAAGAAC+AGG | - | chr1_4:2743279-2743298 | None:intergenic | 45.0% | |
| TGTTCTTCTTGCTGCTGCTA+AGG | + | chr1_4:2743278-2743297 | Msa0143710:CDS | 45.0% | |
| GTTCTTCTTGCTGCTGCTAA+GGG | + | chr1_4:2743279-2743298 | Msa0143710:CDS | 45.0% | |
| TCTTTACCGTTGTACACCGT+TGG | + | chr1_4:2743323-2743342 | Msa0143710:CDS | 45.0% | |
| TGCGATAATTATCATCGGCC+AGG | - | chr1_4:2743353-2743372 | None:intergenic | 45.0% | |
| ! | GAGGCATTTGAGGAAATCGT+TGG | - | chr1_4:2743520-2743539 | None:intergenic | 45.0% |
| ! | AAGTGTGATTTGTGGGCAAG+AGG | - | chr1_4:2743539-2743558 | None:intergenic | 45.0% |
| ATGCGTGCCAATGCGTATAA+TGG | - | chr1_4:2743581-2743600 | None:intergenic | 45.0% | |
| ATGCCTTCTGTGTTTCCAAG+TGG | + | chr1_4:2743599-2743618 | Msa0143710:CDS | 45.0% | |
| CTACCACTTGGAAACACAGA+AGG | - | chr1_4:2743605-2743624 | None:intergenic | 45.0% | |
| TCTGTGTTTCCAAGTGGTAG+TGG | + | chr1_4:2743605-2743624 | Msa0143710:CDS | 45.0% | |
| AACCCATATCCACTACCACT+TGG | - | chr1_4:2743617-2743636 | None:intergenic | 45.0% | |
| TCGGGGACATCCGATAAAAT+TGG | - | chr1_4:2744189-2744208 | None:intergenic | 45.0% | |
| ! | ATTTTATCGGATGTCCCCGA+AGG | + | chr1_4:2744189-2744208 | Msa0143710:intron | 45.0% |
| ! | TTTTATCGGATGTCCCCGAA+GGG | + | chr1_4:2744190-2744209 | Msa0143710:intron | 45.0% |
| TACTCCTCAATTGTCCCTTC+GGG | - | chr1_4:2744207-2744226 | None:intergenic | 45.0% | |
| ATATGCGAATGGCGATTCTG+AGG | + | chr1_4:2744510-2744529 | Msa0143710:intron | 45.0% | |
| GTCTTGTAATCCAGACCCTA+AGG | + | chr1_4:2744745-2744764 | Msa0143710:intron | 45.0% | |
| ! | GGCTTTGTATTCACACCCTT+AGG | - | chr1_4:2744764-2744783 | None:intergenic | 45.0% |
| TCCCTCCAATTGTATCCATC+AGG | + | chr1_4:2745022-2745041 | Msa0143710:intron | 45.0% | |
| ATGTTGCAAGCAGCAAAGCA+TGG | + | chr1_4:2745169-2745188 | Msa0143710:CDS | 45.0% | |
| TGTTGCAAGCAGCAAAGCAT+GGG | + | chr1_4:2745170-2745189 | Msa0143710:CDS | 45.0% | |
| AGGGTAATCCTGACCTCTTA+TGG | + | chr1_4:2745221-2745240 | Msa0143710:intron | 45.0% | |
| GGGTAATCCTGACCTCTTAT+GGG | + | chr1_4:2745222-2745241 | Msa0143710:intron | 45.0% | |
| TGCAACTGTAAATGGACGGA+AGG | + | chr1_4:2745324-2745343 | Msa0143710:CDS | 45.0% | |
| AAATGCCGTGTAGACGCATT+TGG | + | chr1_4:2745355-2745374 | Msa0143710:CDS | 45.0% | |
| TGGCAATTCCATGTTGCACT+TGG | + | chr1_4:2745375-2745394 | Msa0143710:CDS | 45.0% | |
| AATTCCATGTTGCACTTGGC+AGG | + | chr1_4:2745379-2745398 | Msa0143710:CDS | 45.0% | |
| ATATCCTGCCAAGTGCAACA+TGG | - | chr1_4:2745386-2745405 | None:intergenic | 45.0% | |
| CTACGATCAAGATCAGAGGA+AGG | - | chr1_4:2745415-2745434 | None:intergenic | 45.0% | |
| GGATCTACGATCAAGATCAG+AGG | - | chr1_4:2745419-2745438 | None:intergenic | 45.0% | |
| TCTCTTTGCATCTGCATAGC+AGG | - | chr1_4:2745445-2745464 | None:intergenic | 45.0% | |
| CATGTATGTATGCGAGTGAG+AGG | - | chr1_4:2745512-2745531 | None:intergenic | 45.0% | |
| CATGCGTGCAGCTTATATGT+TGG | + | chr1_4:2745528-2745547 | Msa0143710:intron | 45.0% | |
| AATTGTGCACCCCAAGTGTA+AGG | + | chr1_4:2745970-2745989 | Msa0143710:intron | 45.0% | |
| GTGATGTCGTGCAAGAACAA+GGG | - | chr1_4:2746187-2746206 | None:intergenic | 45.0% | |
| TGTGATGTCGTGCAAGAACA+AGG | - | chr1_4:2746188-2746207 | None:intergenic | 45.0% | |
| ACTTCGGTCCTTCTCTTCAT+TGG | + | chr1_4:2746256-2746275 | Msa0143710:CDS | 45.0% | |
| ! | CATTGCCCTTTTCTTCTCTG+TGG | + | chr1_4:2746348-2746367 | Msa0143710:CDS | 45.0% |
| CATAGCAAGTGAAGCACAGA+AGG | - | chr1_4:2746389-2746408 | None:intergenic | 45.0% | |
| GACGGAACTAGAACGATAAC+AGG | - | chr1_4:2746466-2746485 | None:intergenic | 45.0% | |
| !!! | ATTAATTTTTTTCTATTAAT+GGG | - | chr1_4:2741310-2741329 | None:intergenic | 5.0% |
| !!! | TATTAATTTTTTTCTATTAA+TGG | - | chr1_4:2741311-2741330 | None:intergenic | 5.0% |
| ! | AGAGGAGGTATGTCGCAAGT+TGG | + | chr1_4:2739921-2739940 | Msa0143710:CDS | 50.0% |
| ATATAACTGTTGCGGGACGG+GGG | - | chr1_4:2740171-2740190 | None:intergenic | 50.0% | |
| !! | AAGGGAGCAAACGGATTGGA+AGG | - | chr1_4:2741503-2741522 | None:intergenic | 50.0% |
| ATCTTGTGGGACATGGTCTG+TGG | + | chr1_4:2741859-2741878 | Msa0143710:CDS | 50.0% | |
| TCTTGTGGGACATGGTCTGT+GGG | + | chr1_4:2741860-2741879 | Msa0143710:CDS | 50.0% | |
| GCCGATCCAGATATTGAGCA+AGG | + | chr1_4:2742077-2742096 | Msa0143710:CDS | 50.0% | |
| !! | AGAATCGTGTTGACTCGTGG+GGG | + | chr1_4:2742446-2742465 | Msa0143710:intron | 50.0% |
| GTCCCCAAACCACATCATCT+TGG | - | chr1_4:2742529-2742548 | None:intergenic | 50.0% | |
| GGTTTGGGGACGAAGCAATA+AGG | + | chr1_4:2742538-2742557 | Msa0143710:intron | 50.0% | |
| !! | AACGGCATTTAGGCTTTGGG+TGG | + | chr1_4:2742715-2742734 | Msa0143710:intron | 50.0% |
| ATTCCACATCCTCTATGGGG+AGG | + | chr1_4:2743022-2743041 | Msa0143710:CDS | 50.0% | |
| TTCACGTTGCGGTAGTTGCT+GGG | + | chr1_4:2743052-2743071 | Msa0143710:CDS | 50.0% | |
| CAGCTCAGCAACAAGAGCTA+GGG | - | chr1_4:2743157-2743176 | None:intergenic | 50.0% | |
| TCAGCTCAGCAACAAGAGCT+AGG | - | chr1_4:2743158-2743177 | None:intergenic | 50.0% | |
| GGTCTTCCAACGGTGTACAA+CGG | - | chr1_4:2743332-2743351 | None:intergenic | 50.0% | |
| TTGTACACCGTTGGAAGACC+TGG | + | chr1_4:2743332-2743351 | Msa0143710:CDS | 50.0% | |
| !! | TTGTGGGCAAGAGGCATTTG+AGG | - | chr1_4:2743530-2743549 | None:intergenic | 50.0% |
| ACTCCTCAATTGTCCCTTCG+GGG | - | chr1_4:2744206-2744225 | None:intergenic | 50.0% | |
| TCACAACAAGGGTTCGCACA+AGG | - | chr1_4:2744681-2744700 | None:intergenic | 50.0% | |
| TCCGTTTGTGTGCTTTGCAC+CGG | + | chr1_4:2744718-2744737 | Msa0143710:intron | 50.0% | |
| TCCGGTGCAAAGCACACAAA+CGG | - | chr1_4:2744722-2744741 | None:intergenic | 50.0% | |
| GTATTCACACCCTTAGGGTC+TGG | - | chr1_4:2744758-2744777 | None:intergenic | 50.0% | |
| TCAATGGCCCATAAGAGGTC+AGG | - | chr1_4:2745232-2745251 | None:intergenic | 50.0% | |
| TTGCATCTGCATAGCAGGAC+CGG | - | chr1_4:2745440-2745459 | None:intergenic | 50.0% | |
| TACAGAAAGCCACAAGGAGC+TGG | + | chr1_4:2746033-2746052 | Msa0143710:intron | 50.0% | |
| ACAAGGAGCTGGTGAAAGCT+GGG | + | chr1_4:2746044-2746063 | Msa0143710:intron | 50.0% | |
| TGGTGAAAGCTGGGGAGAAA+TGG | + | chr1_4:2746053-2746072 | Msa0143710:CDS | 50.0% | |
| GGTGAAAGCTGGGGAGAAAT+GGG | + | chr1_4:2746054-2746073 | Msa0143710:CDS | 50.0% | |
| TTTCAGCGTAACGAGCCGTT+AGG | - | chr1_4:2746285-2746304 | None:intergenic | 50.0% | |
| ! | AGGAAGAGGCGCAATTGTGA+CGG | - | chr1_4:2746484-2746503 | None:intergenic | 50.0% |
| ! | GGAACAAGCATTGCAGCGAG+TGG | + | chr1_4:2741774-2741793 | Msa0143710:intron | 55.0% |
| CTTGTGGGACATGGTCTGTG+GGG | + | chr1_4:2741861-2741880 | Msa0143710:CDS | 55.0% | |
| AAGAACGGTCCTCCCCATAG+AGG | - | chr1_4:2743034-2743053 | None:intergenic | 55.0% | |
| GAGGACCGTTCTTCACGTTG+CGG | + | chr1_4:2743041-2743060 | Msa0143710:CDS | 55.0% | |
| CTTCACGTTGCGGTAGTTGC+TGG | + | chr1_4:2743051-2743070 | Msa0143710:CDS | 55.0% | |
| GCTCTTGTTGCTGAGCTGAC+CGG | + | chr1_4:2743159-2743178 | Msa0143710:CDS | 55.0% | |
| TCATCGGCCAGGTCTTCCAA+CGG | - | chr1_4:2743342-2743361 | None:intergenic | 55.0% | |
| TGTCCCCGAAGGGACAATTG+AGG | + | chr1_4:2744200-2744219 | Msa0143710:intron | 55.0% | |
| CAGCTTTCACCAGCTCCTTG+TGG | - | chr1_4:2746045-2746064 | None:intergenic | 55.0% | |
| CACAAGGAGCTGGTGAAAGC+TGG | + | chr1_4:2746043-2746062 | Msa0143710:intron | 55.0% | |
| CAAGGAGCTGGTGAAAGCTG+GGG | + | chr1_4:2746045-2746064 | Msa0143710:intron | 55.0% | |
| GGTCCTCCCCATAGAGGATG+TGG | - | chr1_4:2743028-2743047 | None:intergenic | 60.0% | |
| GCTGCAGCTTTCACTGTCCC+TGG | + | chr1_4:2746136-2746155 | Msa0143710:CDS | 60.0% | |
| GCAGCTTTCACTGTCCCTGG+TGG | + | chr1_4:2746139-2746158 | Msa0143710:CDS | 60.0% | |
| TGCGGTAGTTGCTGGGCACG+AGG | + | chr1_4:2743059-2743078 | Msa0143710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 2739907 | 2746537 | 2739907 | ID=Msa0143710;Name=Msa0143710 |
| chr1_4 | mRNA | 2739907 | 2746537 | 2739907 | ID=Msa0143710-mRNA-1;Parent=Msa0143710;Name=Msa0143710-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|0.87|0.28|0.37|8|0|598 |
| chr1_4 | exon | 2739907 | 2739959 | 2739907 | ID=Msa0143710-mRNA-1:exon:1204;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2741854 | 2742098 | 2741854 | ID=Msa0143710-mRNA-1:exon:1205;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2742914 | 2743144 | 2742914 | ID=Msa0143710-mRNA-1:exon:1206;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2743154 | 2743375 | 2743154 | ID=Msa0143710-mRNA-1:exon:1207;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2743498 | 2743659 | 2743498 | ID=Msa0143710-mRNA-1:exon:1208;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2745044 | 2745223 | 2745044 | ID=Msa0143710-mRNA-1:exon:1209;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2745266 | 2745480 | 2745266 | ID=Msa0143710-mRNA-1:exon:1210;Parent=Msa0143710-mRNA-1 |
| chr1_4 | exon | 2746049 | 2746537 | 2746049 | ID=Msa0143710-mRNA-1:exon:1211;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2739907 | 2739959 | 2739907 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2741854 | 2742098 | 2741854 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2742914 | 2743144 | 2742914 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2743154 | 2743375 | 2743154 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2743498 | 2743659 | 2743498 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2745044 | 2745223 | 2745044 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2745266 | 2745480 | 2745266 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| chr1_4 | CDS | 2746049 | 2746537 | 2746049 | ID=Msa0143710-mRNA-1:cds;Parent=Msa0143710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
