Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763580 | AEX20346.1 | 99.709 | 344 | 1 | 0 | 1 | 344 | 1 | 344 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763580 | sp|Q9ZTR1|SPDS1_PEA | 92.105 | 342 | 18 | 2 | 3 | 344 | 2 | 334 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763580 | H2EIY6 | 99.709 | 344 | 1 | 0 | 1 | 344 | 1 | 344 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0721190 | Msa0763580 | 0.858642 | 7.159293e-63 | -8.615850e-47 |
| Msa0763580 | Msa0842920 | 0.924503 | 6.457467e-90 | -8.615850e-47 |
| Msa0763580 | Msa1122160 | 0.811856 | 5.678732e-51 | -8.615850e-47 |
| Msa0763580 | Msa1160570 | 0.818342 | 2.060548e-52 | -8.615850e-47 |
| Msa0763580 | Msa1374330 | 0.888097 | 7.982579e-73 | -8.615850e-47 |
| Msa0763580 | Msa1419850 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
| Msa0388720 | Msa0763580 | 0.836035 | 1.184575e-56 | -8.615850e-47 |
| Msa0514490 | Msa0763580 | 0.803683 | 3.100493e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763580 | MtrunA17_Chr5g0413701 | 97.674 | 344 | 7 | 1 | 1 | 344 | 1 | 343 | 0.0 | 691 |
| Msa0763580 | MtrunA17_Chr8g0365071 | 81.089 | 349 | 51 | 3 | 3 | 344 | 2 | 342 | 0.0 | 581 |
| Msa0763580 | MtrunA17_Chr3g0117881 | 64.865 | 296 | 100 | 1 | 53 | 344 | 41 | 336 | 1.61e-151 | 429 |
| Msa0763580 | MtrunA17_Chr3g0126551 | 65.060 | 332 | 89 | 5 | 34 | 339 | 23 | 353 | 3.05e-149 | 424 |
| Msa0763580 | MtrunA17_Chr1g0158851 | 66.337 | 303 | 87 | 4 | 50 | 339 | 57 | 357 | 6.44e-141 | 404 |
| Msa0763580 | MtrunA17_Chr1g0150851 | 33.942 | 274 | 162 | 10 | 34 | 297 | 21 | 285 | 1.14e-39 | 143 |
| Msa0763580 | MtrunA17_Chr5g0394371 | 36.771 | 223 | 133 | 6 | 73 | 290 | 42 | 261 | 2.32e-38 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763580 | AT1G23820.1 | 79.880 | 333 | 64 | 2 | 12 | 344 | 5 | 334 | 0.0 | 556 |
| Msa0763580 | AT1G70310.1 | 79.403 | 335 | 61 | 3 | 14 | 344 | 10 | 340 | 0.0 | 545 |
| Msa0763580 | AT1G23820.2 | 80.297 | 269 | 51 | 1 | 12 | 280 | 49 | 315 | 3.21e-160 | 451 |
| Msa0763580 | AT5G53120.1 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.07e-148 | 423 |
| Msa0763580 | AT5G53120.4 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.07e-148 | 423 |
| Msa0763580 | AT5G53120.2 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.07e-148 | 423 |
| Msa0763580 | AT5G53120.5 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.07e-148 | 423 |
| Msa0763580 | AT5G53120.3 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.07e-148 | 423 |
| Msa0763580 | AT5G53120.7 | 64.671 | 334 | 91 | 4 | 34 | 341 | 40 | 372 | 3.63e-148 | 422 |
| Msa0763580 | AT5G53120.6 | 59.557 | 361 | 92 | 5 | 34 | 341 | 23 | 382 | 3.72e-144 | 413 |
| Msa0763580 | AT5G19530.2 | 31.900 | 279 | 169 | 8 | 70 | 343 | 40 | 302 | 7.41e-41 | 146 |
| Msa0763580 | AT5G19530.1 | 31.900 | 279 | 169 | 8 | 70 | 343 | 47 | 309 | 8.40e-41 | 146 |
Find 93 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGGTTGAGGTTCTTT+TGG | 0.239220 | 5_2:-22861633 | None:intergenic |
| CTCAAACATTATTGACAATA+TGG | 0.252304 | 5_2:+22866553 | Msa0763580:three_prime_UTR |
| TCAAGGAAAATCTGATTATC+AGG | 0.273203 | 5_2:+22863201 | Msa0763580:CDS |
| ATATGGCAAGGTTCTTGTTT+TGG | 0.280455 | 5_2:+22863333 | Msa0763580:CDS |
| CTCAATTCCAAACCCCAAAA+AGG | 0.285078 | 5_2:+22863426 | Msa0763580:CDS |
| TCAAAACCTACTGCTATATC+AGG | 0.285866 | 5_2:-22864847 | None:intergenic |
| TGGGATTGAAAGGGTGCTTA+TGG | 0.300718 | 5_2:+22866376 | Msa0763580:three_prime_UTR |
| GGTTTATCTTCTGTTATTCC+TGG | 0.301003 | 5_2:+22861654 | Msa0763580:CDS |
| TTCTTCTCTTTGCCTCTTCA+AGG | 0.305491 | 5_2:-22861562 | None:intergenic |
| AGTTGATGGATTCAGTTCTT+AGG | 0.318848 | 5_2:+22866523 | Msa0763580:three_prime_UTR |
| TGGATCTATCGATCAATAAA+AGG | 0.320193 | 5_2:-22866417 | None:intergenic |
| TCTGCTGCTGCCGCCATGTT+TGG | 0.323278 | 5_2:-22861507 | None:intergenic |
| TCAGGATGTTATGGTCTTCC+AGG | 0.350984 | 5_2:+22863219 | Msa0763580:CDS |
| TTGGTCATTGGTGGAGGAGA+TGG | 0.355582 | 5_2:+22864153 | Msa0763580:CDS |
| TTTAGAAGCAATTGCTCTCT+TGG | 0.357834 | 5_2:-22866333 | None:intergenic |
| ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 5_2:-22865015 | None:intergenic |
| TGAAAATGAGTTGCAGTTGA+TGG | 0.370724 | 5_2:+22866509 | Msa0763580:three_prime_UTR |
| ATCTGATTATCAGGATGTTA+TGG | 0.375563 | 5_2:+22863210 | Msa0763580:CDS |
| CCGCCATGTTTGGTTTGGTT+TGG | 0.381041 | 5_2:-22861497 | None:intergenic |
| TGCTGCCGCCATGTTTGGTT+TGG | 0.385140 | 5_2:-22861502 | None:intergenic |
| TATCTTCTGTTATTCCTGGC+TGG | 0.386803 | 5_2:+22861658 | Msa0763580:CDS |
| TGACAGAGCCTTTGAATACT+TGG | 0.386990 | 5_2:-22865299 | None:intergenic |
| TTGCTCAACTGAGGGGCCTT+CGG | 0.394265 | 5_2:+22865909 | Msa0763580:CDS |
| TTTATTCCACGGTTCATTGA+TGG | 0.394520 | 5_2:-22866445 | None:intergenic |
| GTGGATTCATCTGATCCTAT+TGG | 0.395416 | 5_2:+22865042 | Msa0763580:CDS |
| AAGGGAAAATCTGTGGATTC+AGG | 0.419271 | 5_2:-22861543 | None:intergenic |
| GTTTGCAATGAAAATGAAGT+AGG | 0.420379 | 5_2:-22861475 | None:intergenic |
| ATAACAGAAGATAAACCATT+TGG | 0.430526 | 5_2:-22861648 | None:intergenic |
| GTACTCAGGCGGAAAGTATA+TGG | 0.432205 | 5_2:+22865235 | Msa0763580:CDS |
| GTGGAAAAGATTCTGTTTCA+AGG | 0.447500 | 5_2:+22863184 | Msa0763580:CDS |
| TTCGGTCGATTTCAAGCATC+CGG | 0.461644 | 5_2:+22865927 | Msa0763580:CDS |
| TGGCTATCATTCTCATCAAT+AGG | 0.466884 | 5_2:-22865955 | None:intergenic |
| TCAGAGTTGTAAAATTTCAA+TGG | 0.468115 | 5_2:-22865991 | None:intergenic |
| TGAGTACACACAACACCTCC+TGG | 0.469052 | 5_2:-22865219 | None:intergenic |
| AAAACGAACCAGGCCACATT+GGG | 0.470461 | 5_2:-22861695 | None:intergenic |
| GTTGCAAGGGCTCTTCGTCC+AGG | 0.475620 | 5_2:+22865201 | Msa0763580:CDS |
| TTTATGCTTTGCTCAACTGA+GGG | 0.479096 | 5_2:+22865901 | Msa0763580:CDS |
| TCTTCTCTTTGCCTCTTCAA+GGG | 0.480585 | 5_2:-22861561 | None:intergenic |
| GAAGATAAACCATTTGGTTG+AGG | 0.481438 | 5_2:-22861642 | None:intergenic |
| CCAAAAGAACCTCAACCAAA+TGG | 0.482653 | 5_2:+22861633 | Msa0763580:CDS |
| AACTTATGATGCAGTTATTG+TGG | 0.485527 | 5_2:+22865023 | Msa0763580:CDS |
| GTCATTGGTGGAGGAGATGG+AGG | 0.490380 | 5_2:+22864156 | Msa0763580:CDS |
| ATTGCTCTCTTGGCAAAAGA+TGG | 0.491734 | 5_2:-22866323 | None:intergenic |
| CCACGTGTGACACTTAATAT+CGG | 0.495007 | 5_2:+22864874 | Msa0763580:CDS |
| TCAATGGTCTTCCTGCATGC+TGG | 0.497270 | 5_2:-22865975 | None:intergenic |
| AAGGCTCTGTCAACTATGCT+TGG | 0.497721 | 5_2:+22865310 | Msa0763580:CDS |
| GAAATTAGCCCAATGTGGCC+TGG | 0.504538 | 5_2:+22861687 | Msa0763580:CDS |
| TTTGCAATGAAAATGAAGTA+GGG | 0.513083 | 5_2:-22861474 | None:intergenic |
| TTCTCATCAATAGGATTCAC+CGG | 0.513261 | 5_2:-22865946 | None:intergenic |
| CCTCTTCAAGGGAAAATCTG+TGG | 0.516002 | 5_2:-22861550 | None:intergenic |
| AGGGGAGGCTCACTCATTGA+AGG | 0.518756 | 5_2:+22863162 | Msa0763580:intron |
| GGGAAGTCACTCGGTTCGTG+TGG | 0.523989 | 5_2:-22861454 | None:intergenic |
| TTATTCCACGGTTCATTGAT+GGG | 0.525894 | 5_2:-22866444 | None:intergenic |
| GCAAACAGAAAGCTGCTGAA+TGG | 0.526418 | 5_2:-22866301 | None:intergenic |
| GAAGATGAGTGATCATCTCT+TGG | 0.533026 | 5_2:-22863396 | None:intergenic |
| AGAACACACCTTGGGTATGT+AGG | 0.534999 | 5_2:-22865342 | None:intergenic |
| AGGAGATGGAGGAGTCCTGC+GGG | 0.539206 | 5_2:+22864167 | Msa0763580:CDS |
| TGAAGCACTACTTTATTCCA+CGG | 0.553365 | 5_2:-22866456 | None:intergenic |
| ACGGTTCATTGATGGGCAGA+TGG | 0.560703 | 5_2:-22866437 | None:intergenic |
| AAACCAAACCAAACCAAACA+TGG | 0.561849 | 5_2:+22861494 | Msa0763580:exon |
| CTAATTTCAGAGAACCAGCC+AGG | 0.562845 | 5_2:-22861672 | None:intergenic |
| GGTCATTCAGCTCACAGAAA+GGG | 0.566371 | 5_2:+22863360 | Msa0763580:CDS |
| GGGTCATTCAGCTCACAGAA+AGG | 0.568875 | 5_2:+22863359 | Msa0763580:CDS |
| GAGAATGATAGCCAGCATGC+AGG | 0.575153 | 5_2:+22865964 | Msa0763580:CDS |
| GTAGTCAGCAACATATGGCA+AGG | 0.575663 | 5_2:+22863321 | Msa0763580:intron |
| ATGAGTGATCATCTCTTGGT+AGG | 0.576912 | 5_2:-22863392 | None:intergenic |
| GAAAACGAACCAGGCCACAT+TGG | 0.582261 | 5_2:-22861696 | None:intergenic |
| GAGGAGATGGAGGAGTCCTG+CGG | 0.584086 | 5_2:+22864166 | Msa0763580:CDS |
| GCTTCATATGCATATCATTG+AGG | 0.585111 | 5_2:+22865257 | Msa0763580:CDS |
| AGGAGGTGTTGTGTGTACTC+AGG | 0.589734 | 5_2:+22865221 | Msa0763580:CDS |
| CATTTGTGAAATAGACAAGA+TGG | 0.590675 | 5_2:+22864224 | Msa0763580:CDS |
| CAAAACCTACTGCTATATCA+GGG | 0.592364 | 5_2:-22864846 | None:intergenic |
| AATTGTCGCCAAGTATTCAA+AGG | 0.594618 | 5_2:+22865291 | Msa0763580:CDS |
| TTATGCTTTGCTCAACTGAG+GGG | 0.601606 | 5_2:+22865902 | Msa0763580:CDS |
| GGAAGTCACTCGGTTCGTGT+GGG | 0.605624 | 5_2:-22861453 | None:intergenic |
| TGTCAACTATGCTTGGACCA+CGG | 0.611981 | 5_2:+22865317 | Msa0763580:CDS |
| GGAGGCTCACTCATTGAAGG+TGG | 0.624884 | 5_2:+22863165 | Msa0763580:CDS |
| GTGACACTTAATATCGGCGA+TGG | 0.629074 | 5_2:+22864880 | Msa0763580:CDS |
| GGGTTTGGAATTGAGCAAAG+AGG | 0.635906 | 5_2:-22863418 | None:intergenic |
| ATCTGTGGATTCAGGAAGTG+TGG | 0.645081 | 5_2:-22861535 | None:intergenic |
| AGGTGTTGTGTGTACTCAGG+CGG | 0.646480 | 5_2:+22865224 | Msa0763580:CDS |
| CCACGGTTCCTACATACCCA+AGG | 0.659865 | 5_2:+22865334 | Msa0763580:CDS |
| ATCTGCCCATCAATGAACCG+TGG | 0.662440 | 5_2:+22866439 | Msa0763580:three_prime_UTR |
| GCAAGGGCTCTTCGTCCAGG+AGG | 0.667733 | 5_2:+22865204 | Msa0763580:CDS |
| AATGGCGTGAAACTTCCCGC+AGG | 0.668044 | 5_2:-22864182 | None:intergenic |
| GGATGCTTGAAATCGACCGA+AGG | 0.670797 | 5_2:-22865925 | None:intergenic |
| GTTTCAGAGACACCGTTGTG+AGG | 0.681469 | 5_2:-22861606 | None:intergenic |
| CCGATATTAAGTGTCACACG+TGG | 0.687158 | 5_2:-22864874 | None:intergenic |
| AATGAAGTAGGGAAGTCACT+CGG | 0.702406 | 5_2:-22861463 | None:intergenic |
| TCTCTGAAATTAGCCCAATG+TGG | 0.705739 | 5_2:+22861682 | Msa0763580:CDS |
| CCTTGGGTATGTAGGAACCG+TGG | 0.729877 | 5_2:-22865334 | None:intergenic |
| CCAAACCAAACCAAACATGG+CGG | 0.741503 | 5_2:+22861497 | Msa0763580:exon |
| GAAGATCAACTACCTCACAA+CGG | 0.763149 | 5_2:+22861594 | Msa0763580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATATTTTTTTTTTTA+AGG | + | chr5_2:22862006-22862025 | Msa0763580:intron | 0.0% |
| !!! | TATTTTTTTTTTTAAGGTTT+TGG | + | chr5_2:22862012-22862031 | Msa0763580:intron | 10.0% |
| !!! | ATTTTTTTTTTTAAGGTTTT+GGG | + | chr5_2:22862013-22862032 | Msa0763580:intron | 10.0% |
| !!! | TTTTGATTATATGTAATATA+TGG | + | chr5_2:22862175-22862194 | Msa0763580:intron | 10.0% |
| !!! | ACTTTTATTTTTTAAAATCA+CGG | + | chr5_2:22862641-22862660 | Msa0763580:intron | 10.0% |
| !!! | GATATGATTATTTTTTATTA+TGG | + | chr5_2:22865837-22865856 | Msa0763580:intron | 10.0% |
| !!! | TTTATTTTTTGATGAAACTT+AGG | + | chr5_2:22861800-22861819 | Msa0763580:intron | 15.0% |
| !!! | TTTTTTTTTTTAAGGTTTTG+GGG | + | chr5_2:22862014-22862033 | Msa0763580:intron | 15.0% |
| !! | TTATAATAATGACAAATCAT+GGG | - | chr5_2:22862939-22862958 | None:intergenic | 15.0% |
| !! | ATTATAATAATGACAAATCA+TGG | - | chr5_2:22862940-22862959 | None:intergenic | 15.0% |
| !! | ACATATACTAAATTATTAGA+GGG | - | chr5_2:22863469-22863488 | None:intergenic | 15.0% |
| !!! | TTTTAATCATTATATGTAGA+TGG | + | chr5_2:22863572-22863591 | Msa0763580:intron | 15.0% |
| !! | TAAAGACCATAAAAATTATA+AGG | - | chr5_2:22865086-22865105 | None:intergenic | 15.0% |
| !!! | TATAATTTTTATGGTCTTTA+CGG | + | chr5_2:22865086-22865105 | Msa0763580:intron | 15.0% |
| !!! | TTTTATTTTTTTTGTTTCAG+TGG | + | chr5_2:22865868-22865887 | Msa0763580:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTTCAGT+GGG | + | chr5_2:22865869-22865888 | Msa0763580:intron | 15.0% |
| !!! | ATTTTTTAGAATCTAAAACA+AGG | + | chr5_2:22866142-22866161 | Msa0763580:intron | 15.0% |
| !!! | TTTTTTAGAATCTAAAACAA+GGG | + | chr5_2:22866143-22866162 | Msa0763580:intron | 15.0% |
| !!! | GAATTTTAACTTCAAAAAAT+AGG | - | chr5_2:22866612-22866631 | None:intergenic | 15.0% |
| !!! | TTTTGAGAAAATGAACAAAA+GGG | - | chr5_2:22861730-22861749 | None:intergenic | 20.0% |
| !!! | TTTTTGAGAAAATGAACAAA+AGG | - | chr5_2:22861731-22861750 | None:intergenic | 20.0% |
| !! | TTATGCTGATAAATGAATAA+GGG | - | chr5_2:22861770-22861789 | None:intergenic | 20.0% |
| !! | TTTATGCTGATAAATGAATA+AGG | - | chr5_2:22861771-22861790 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTGTTGTTTGT+TGG | + | chr5_2:22861831-22861850 | Msa0763580:intron | 20.0% |
| !!! | TGTTTTTTTTGTTGTTTGTT+GGG | + | chr5_2:22861832-22861851 | Msa0763580:intron | 20.0% |
| !!! | TTTTATAATTGATTGTTAGC+TGG | + | chr5_2:22861869-22861888 | Msa0763580:intron | 20.0% |
| !!! | TTGATTATGATTGTGTTTTT+AGG | + | chr5_2:22861958-22861977 | Msa0763580:intron | 20.0% |
| !!! | CAAAATTTTGACTAAAATTC+TGG | + | chr5_2:22862276-22862295 | Msa0763580:intron | 20.0% |
| !! | GTGAAAATAAATTTGAGAAA+TGG | - | chr5_2:22862416-22862435 | None:intergenic | 20.0% |
| !! | CAAGTAAAAACAATAACAAA+TGG | - | chr5_2:22862459-22862478 | None:intergenic | 20.0% |
| !!! | TATTGTTTTTACTTGCATAT+TGG | + | chr5_2:22862464-22862483 | Msa0763580:intron | 20.0% |
| !!! | AAAAGGTAATTGAATTTTCA+GGG | - | chr5_2:22862803-22862822 | None:intergenic | 20.0% |
| !!! | AAAGTATCAAATACCTTTTT+GGG | - | chr5_2:22863442-22863461 | None:intergenic | 20.0% |
| !! | GACATATACTAAATTATTAG+AGG | - | chr5_2:22863470-22863489 | None:intergenic | 20.0% |
| !! | AATTCAGGATAATAATTGTA+AGG | + | chr5_2:22863538-22863557 | Msa0763580:intron | 20.0% |
| !! | ACTTAAACGTAAATAATCTA+CGG | - | chr5_2:22863733-22863752 | None:intergenic | 20.0% |
| !!! | AATAAGCTAAAAACAGTTTT+TGG | + | chr5_2:22864514-22864533 | Msa0763580:intron | 20.0% |
| !!! | TTTTTTTTTTTCCTTCAAGT+TGG | + | chr5_2:22864660-22864679 | Msa0763580:intron | 20.0% |
| !!! | TTTTTTTTTTCCTTCAAGTT+GGG | + | chr5_2:22864661-22864680 | Msa0763580:intron | 20.0% |
| !! | AAAAATGGAGAGTTAATATT+TGG | - | chr5_2:22866264-22866283 | None:intergenic | 20.0% |
| !!! | AAATATTAACTCTCCATTTT+TGG | + | chr5_2:22866263-22866282 | Msa0763580:intron | 20.0% |
| ! | TTTGCAATGAAAATGAAGTA+GGG | - | chr5_2:22861477-22861496 | None:intergenic | 25.0% |
| ! | ATAACAGAAGATAAACCATT+TGG | - | chr5_2:22861651-22861670 | None:intergenic | 25.0% |
| ! | TCCCTAAATTCAAGAAAAAA+GGG | - | chr5_2:22862047-22862066 | None:intergenic | 25.0% |
| ! | TTCCCTAAATTCAAGAAAAA+AGG | - | chr5_2:22862048-22862067 | None:intergenic | 25.0% |
| !! | ATTAATTTTGCTCTTCAAGA+TGG | + | chr5_2:22862108-22862127 | Msa0763580:intron | 25.0% |
| !! | ATTTTCATCAATCAAGGATT+TGG | + | chr5_2:22862202-22862221 | Msa0763580:intron | 25.0% |
| !! | TTTTCATCAATCAAGGATTT+GGG | + | chr5_2:22862203-22862222 | Msa0763580:intron | 25.0% |
| ! | GTAGATAGTAGAAATTTGAT+TGG | + | chr5_2:22862348-22862367 | Msa0763580:intron | 25.0% |
| ! | TACTTGCATATTGGATTTAA+TGG | + | chr5_2:22862473-22862492 | Msa0763580:intron | 25.0% |
| ! | AGAAACATTGAATCTCATAT+TGG | + | chr5_2:22862549-22862568 | Msa0763580:intron | 25.0% |
| ! | TAAGAACATGTGATTAATGA+TGG | - | chr5_2:22862708-22862727 | None:intergenic | 25.0% |
| !! | CAAAAGGTAATTGAATTTTC+AGG | - | chr5_2:22862804-22862823 | None:intergenic | 25.0% |
| !! | ATTTGGTATGGTTTATGTTT+TGG | + | chr5_2:22862983-22863002 | Msa0763580:intron | 25.0% |
| ! | TTTCTAATAAGACTTTGCTT+TGG | - | chr5_2:22863088-22863107 | None:intergenic | 25.0% |
| !! | AAGTATCAAATACCTTTTTG+GGG | - | chr5_2:22863441-22863460 | None:intergenic | 25.0% |
| !!! | CAAAGTATCAAATACCTTTT+TGG | - | chr5_2:22863443-22863462 | None:intergenic | 25.0% |
| !! | ATTGACTTTCTTATGTAGTT+TGG | + | chr5_2:22863508-22863527 | Msa0763580:intron | 25.0% |
| ! | AATGTCTATATTGAATCTCT+TGG | + | chr5_2:22863619-22863638 | Msa0763580:intron | 25.0% |
| ! | GTAGATTATTTACGTTTAAG+TGG | + | chr5_2:22863732-22863751 | Msa0763580:intron | 25.0% |
| !! | TTCTATTTTCTGTTAGGTTT+TGG | + | chr5_2:22864134-22864153 | Msa0763580:intron | 25.0% |
| ! | AAAAAAAACACAGCAATAAG+CGG | - | chr5_2:22864706-22864725 | None:intergenic | 25.0% |
| !! | CTTTGCACAAAATAGATTTT+AGG | - | chr5_2:22864745-22864764 | None:intergenic | 25.0% |
| ! | TATATCAGGGAAAAATTGTT+TGG | - | chr5_2:22864836-22864855 | None:intergenic | 25.0% |
| ! | TTCAGATATATCATACCAAT+AGG | - | chr5_2:22865060-22865079 | None:intergenic | 25.0% |
| !! | GAAACGCCTTATAATTTTTA+TGG | + | chr5_2:22865077-22865096 | Msa0763580:intron | 25.0% |
| !! | TATAACATGCTTTTCGATTA+GGG | + | chr5_2:22865815-22865834 | Msa0763580:intron | 25.0% |
| ! | TCAGAGTTGTAAAATTTCAA+TGG | - | chr5_2:22865994-22866013 | None:intergenic | 25.0% |
| !! | ATTGAAATTTTACAACTCTG+AGG | + | chr5_2:22865993-22866012 | Msa0763580:CDS | 25.0% |
| ! | ACCATTATGTATTACTGTTA+GGG | - | chr5_2:22866121-22866140 | None:intergenic | 25.0% |
| ! | AACCATTATGTATTACTGTT+AGG | - | chr5_2:22866122-22866141 | None:intergenic | 25.0% |
| ! | GTTAATATTTGGAGAAGAAA+AGG | - | chr5_2:22866253-22866272 | None:intergenic | 25.0% |
| ! | CTGAAATAAAGAACCAAAAA+TGG | - | chr5_2:22866279-22866298 | None:intergenic | 25.0% |
| !! | TCAAATTGAGAACATTTTCA+TGG | + | chr5_2:22866356-22866375 | Msa0763580:exon | 25.0% |
| !! | CAAATTGAGAACATTTTCAT+GGG | + | chr5_2:22866357-22866376 | Msa0763580:exon | 25.0% |
| ! | CTCAAACATTATTGACAATA+TGG | + | chr5_2:22866553-22866572 | Msa0763580:three_prime_UTR | 25.0% |
| GTTTGCAATGAAAATGAAGT+AGG | - | chr5_2:22861478-22861497 | None:intergenic | 30.0% | |
| !! | ATGAAAGTATCAATTCTCTG+TGG | + | chr5_2:22861928-22861947 | Msa0763580:intron | 30.0% |
| !!! | AGCCCTTTTTTCTTGAATTT+AGG | + | chr5_2:22862042-22862061 | Msa0763580:intron | 30.0% |
| !!! | GCCCTTTTTTCTTGAATTTA+GGG | + | chr5_2:22862043-22862062 | Msa0763580:intron | 30.0% |
| TAGCAGTACTATTGTAGTAT+AGG | - | chr5_2:22862251-22862270 | None:intergenic | 30.0% | |
| TTGAATCTCATATTGGTCAT+AGG | + | chr5_2:22862556-22862575 | Msa0763580:intron | 30.0% | |
| TGAATCTCATATTGGTCATA+GGG | + | chr5_2:22862557-22862576 | Msa0763580:intron | 30.0% | |
| TTAACTCTTTGATCAGTTGT+AGG | + | chr5_2:22862851-22862870 | Msa0763580:intron | 30.0% | |
| TATATTTCGCTGCAAACATT+TGG | + | chr5_2:22862966-22862985 | Msa0763580:intron | 30.0% | |
| !!! | CGAGATTTTGGTTTTCTTTA+AGG | + | chr5_2:22863045-22863064 | Msa0763580:intron | 30.0% |
| !! | GTATTTTTACAAAAGTGTGC+AGG | - | chr5_2:22863113-22863132 | None:intergenic | 30.0% |
| ! | TGAACTTTGTTGTAATTTGC+AGG | + | chr5_2:22863142-22863161 | Msa0763580:intron | 30.0% |
| ! | GAACTTTGTTGTAATTTGCA+GGG | + | chr5_2:22863143-22863162 | Msa0763580:intron | 30.0% |
| ! | AACTTTGTTGTAATTTGCAG+GGG | + | chr5_2:22863144-22863163 | Msa0763580:intron | 30.0% |
| TCAAGGAAAATCTGATTATC+AGG | + | chr5_2:22863201-22863220 | Msa0763580:CDS | 30.0% | |
| ATCTGATTATCAGGATGTTA+TGG | + | chr5_2:22863210-22863229 | Msa0763580:CDS | 30.0% | |
| AACAGAACTAGTACTATGAA+GGG | - | chr5_2:22863280-22863299 | None:intergenic | 30.0% | |
| AAACAGAACTAGTACTATGA+AGG | - | chr5_2:22863281-22863300 | None:intergenic | 30.0% | |
| TAGTTTGGCAAAAAGAATTC+AGG | + | chr5_2:22863523-22863542 | Msa0763580:intron | 30.0% | |
| !! | TACAGAGTGTTGTCAAATAA+CGG | - | chr5_2:22863861-22863880 | None:intergenic | 30.0% |
| TATTATATGTCGAAGAGAGT+AGG | + | chr5_2:22863969-22863988 | Msa0763580:intron | 30.0% | |
| ! | CTATCTTTTCTACTGAAGAA+TGG | - | chr5_2:22864203-22864222 | None:intergenic | 30.0% |
| CATTTGTGAAATAGACAAGA+TGG | + | chr5_2:22864224-22864243 | Msa0763580:CDS | 30.0% | |
| TGACATACTATCATCTTACT+TGG | + | chr5_2:22864313-22864332 | Msa0763580:intron | 30.0% | |
| GACATACTATCATCTTACTT+GGG | + | chr5_2:22864314-22864333 | Msa0763580:intron | 30.0% | |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | - | chr5_2:22864341-22864360 | None:intergenic | 30.0% |
| CTTATTCTCATAAATTCTCC+AGG | - | chr5_2:22864500-22864519 | None:intergenic | 30.0% | |
| AAACTATTTGCAAGAGTTCA+CGG | - | chr5_2:22864558-22864577 | None:intergenic | 30.0% | |
| TCTTGCAAATAGTTTCACAA+GGG | + | chr5_2:22864563-22864582 | Msa0763580:intron | 30.0% | |
| AAGGAAAAAAAAAAAGCGAG+GGG | - | chr5_2:22864655-22864674 | None:intergenic | 30.0% | |
| GAAGGAAAAAAAAAAAGCGA+GGG | - | chr5_2:22864656-22864675 | None:intergenic | 30.0% | |
| TGAAGGAAAAAAAAAAAGCG+AGG | - | chr5_2:22864657-22864676 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTCCTTCGTCATG+CGG | + | chr5_2:22864719-22864738 | Msa0763580:intron | 30.0% |
| AGTGAAGTGATTAAGAAACA+TGG | - | chr5_2:22864925-22864944 | None:intergenic | 30.0% | |
| TCTTAATCACTTCACTGTTT+AGG | + | chr5_2:22864929-22864948 | Msa0763580:intron | 30.0% | |
| CTTAATCACTTCACTGTTTA+GGG | + | chr5_2:22864930-22864949 | Msa0763580:intron | 30.0% | |
| ! | AGGGATAACTTTTCTAATGA+TGG | + | chr5_2:22864949-22864968 | Msa0763580:intron | 30.0% |
| AACTTATGATGCAGTTATTG+TGG | + | chr5_2:22865023-22865042 | Msa0763580:CDS | 30.0% | |
| CAACATTGTAATATGTGGAA+AGG | - | chr5_2:22865424-22865443 | None:intergenic | 30.0% | |
| ! | TTTAAGATTGCGGAAAATAG+CGG | + | chr5_2:22865449-22865468 | Msa0763580:intron | 30.0% |
| ACTATGCTTAAACACTTAAG+TGG | + | chr5_2:22865570-22865589 | Msa0763580:intron | 30.0% | |
| GTTTCAAATCAACTATCTAG+TGG | - | chr5_2:22865658-22865677 | None:intergenic | 30.0% | |
| !! | GTTGATTTGAAACTGCAAAA+TGG | + | chr5_2:22865665-22865684 | Msa0763580:intron | 30.0% |
| TCAATCATCATCAGTCATAA+TGG | + | chr5_2:22865694-22865713 | Msa0763580:intron | 30.0% | |
| !!! | TCTTATTTTCTGTATCCTCT+TGG | + | chr5_2:22865738-22865757 | Msa0763580:intron | 30.0% |
| GAATACATAACCAACACAAT+TGG | - | chr5_2:22865767-22865786 | None:intergenic | 30.0% | |
| ! | CTATAACATGCTTTTCGATT+AGG | + | chr5_2:22865814-22865833 | Msa0763580:intron | 30.0% |
| !! | GTCATCTTAGAGTTTGTTTT+AGG | - | chr5_2:22866096-22866115 | None:intergenic | 30.0% |
| ACCCTAACAGTAATACATAA+TGG | + | chr5_2:22866117-22866136 | Msa0763580:intron | 30.0% | |
| ! | AACATTTTCATGGGATTGAA+AGG | + | chr5_2:22866366-22866385 | Msa0763580:three_prime_UTR | 30.0% |
| ! | ACATTTTCATGGGATTGAAA+GGG | + | chr5_2:22866367-22866386 | Msa0763580:three_prime_UTR | 30.0% |
| TGGATCTATCGATCAATAAA+AGG | - | chr5_2:22866420-22866439 | None:intergenic | 30.0% | |
| AAACCAAACCAAACCAAACA+TGG | + | chr5_2:22861494-22861513 | Msa0763580:exon | 35.0% | |
| GAAGATAAACCATTTGGTTG+AGG | - | chr5_2:22861645-22861664 | None:intergenic | 35.0% | |
| GGTTTATCTTCTGTTATTCC+TGG | + | chr5_2:22861654-22861673 | Msa0763580:CDS | 35.0% | |
| !!! | TTTTGTTGTTTGTTGGGTCA+TGG | + | chr5_2:22861838-22861857 | Msa0763580:intron | 35.0% |
| TAATTGATTGTTAGCTGGTG+TGG | + | chr5_2:22861874-22861893 | Msa0763580:intron | 35.0% | |
| ! | TTTTGCTCTTCAAGATGGAT+TGG | + | chr5_2:22862113-22862132 | Msa0763580:intron | 35.0% |
| ! | GGACACATTTTCATCAATCA+AGG | + | chr5_2:22862196-22862215 | Msa0763580:intron | 35.0% |
| GGTCATTTAAATCGTTCAAC+TGG | - | chr5_2:22862438-22862457 | None:intergenic | 35.0% | |
| AATGTTTCTCTCACAAGACA+TGG | - | chr5_2:22862538-22862557 | None:intergenic | 35.0% | |
| CTGAGCTACTTAAGAACAAA+AGG | - | chr5_2:22862820-22862839 | None:intergenic | 35.0% | |
| TTTGTTCTTAAGTAGCTCAG+TGG | + | chr5_2:22862820-22862839 | Msa0763580:intron | 35.0% | |
| AGTTGTAGGTTCTTTCTCAT+TGG | + | chr5_2:22862865-22862884 | Msa0763580:intron | 35.0% | |
| AATGACAAATCATGGGAACT+GGG | - | chr5_2:22862932-22862951 | None:intergenic | 35.0% | |
| TAATGACAAATCATGGGAAC+TGG | - | chr5_2:22862933-22862952 | None:intergenic | 35.0% | |
| TTGGTTGAATATGCATATGC+TGG | + | chr5_2:22863002-22863021 | Msa0763580:intron | 35.0% | |
| ! | GAAGTAGATCTTCGAGATTT+TGG | + | chr5_2:22863033-22863052 | Msa0763580:intron | 35.0% |
| GTGGAAAAGATTCTGTTTCA+AGG | + | chr5_2:22863184-22863203 | Msa0763580:CDS | 35.0% | |
| ACAGAACTAGTACTATGAAG+GGG | - | chr5_2:22863279-22863298 | None:intergenic | 35.0% | |
| ! | GTTTTGTAGTCAGCAACATA+TGG | + | chr5_2:22863316-22863335 | Msa0763580:intron | 35.0% |
| !! | ATATGGCAAGGTTCTTGTTT+TGG | + | chr5_2:22863333-22863352 | Msa0763580:CDS | 35.0% |
| !!! | TCAAATACCTTTTTGGGGTT+TGG | - | chr5_2:22863436-22863455 | None:intergenic | 35.0% |
| ATATGTAGATGGTTGCTTAG+AGG | + | chr5_2:22863583-22863602 | Msa0763580:intron | 35.0% | |
| ATGGTTGCTTAGAGGAATTT+GGG | + | chr5_2:22863591-22863610 | Msa0763580:intron | 35.0% | |
| CTTTAGCACTGTAGCATAAT+GGG | - | chr5_2:22863838-22863857 | None:intergenic | 35.0% | |
| TATTCGCTATTTGACAACAC+TGG | + | chr5_2:22863944-22863963 | Msa0763580:intron | 35.0% | |
| ATACAAACCACTCTTGAGAA+TGG | + | chr5_2:22864024-22864043 | Msa0763580:intron | 35.0% | |
| TGGAATGTTGGATCATTACA+AGG | + | chr5_2:22864044-22864063 | Msa0763580:intron | 35.0% | |
| TTGAAAAGTTACGCAAGGAA+TGG | - | chr5_2:22864079-22864098 | None:intergenic | 35.0% | |
| CCTAACAGAAAATAGAAGTG+AGG | - | chr5_2:22864131-22864150 | None:intergenic | 35.0% | |
| ! | CCTCACTTCTATTTTCTGTT+AGG | + | chr5_2:22864128-22864147 | Msa0763580:intron | 35.0% |
| !! | TTCTGTTAGGTTTTGGTCAT+TGG | + | chr5_2:22864141-22864160 | Msa0763580:intron | 35.0% |
| !! | CGTGTTTTTATAAGTTGTCC+TGG | + | chr5_2:22864479-22864498 | Msa0763580:intron | 35.0% |
| CTCTTGCAAATAGTTTCACA+AGG | + | chr5_2:22864562-22864581 | Msa0763580:intron | 35.0% | |
| AGGAAAAAAAAAAAGCGAGG+GGG | - | chr5_2:22864654-22864673 | None:intergenic | 35.0% | |
| !!! | TTTTTTTCCTTCAAGTTGGG+TGG | + | chr5_2:22864664-22864683 | Msa0763580:intron | 35.0% |
| !!! | TTTTTTCCTTCAAGTTGGGT+GGG | + | chr5_2:22864665-22864684 | Msa0763580:intron | 35.0% |
| TTGAAGTCTTCTTTCTTTGC+AGG | + | chr5_2:22864807-22864826 | Msa0763580:intron | 35.0% | |
| ! | TTTTTCCCTGATATAGCAGT+AGG | + | chr5_2:22864841-22864860 | Msa0763580:CDS | 35.0% |
| CAAAACCTACTGCTATATCA+GGG | - | chr5_2:22864849-22864868 | None:intergenic | 35.0% | |
| TCAAAACCTACTGCTATATC+AGG | - | chr5_2:22864850-22864869 | None:intergenic | 35.0% | |
| ! | TGATATAGCAGTAGGTTTTG+AGG | + | chr5_2:22864849-22864868 | Msa0763580:CDS | 35.0% |
| GGTTTGTCTTTCAATGATCT+AGG | + | chr5_2:22864970-22864989 | Msa0763580:intron | 35.0% | |
| ! | TCTAGGAGTTGCATTTTTGA+AGG | + | chr5_2:22864987-22865006 | Msa0763580:intron | 35.0% |
| ! | TTTTCAAAAAGCTCTTGAGC+AGG | - | chr5_2:22865165-22865184 | None:intergenic | 35.0% |
| !!! | TGAAAAGCCCTTTTTTGAGT+CGG | + | chr5_2:22865179-22865198 | Msa0763580:CDS | 35.0% |
| GCTTCATATGCATATCATTG+AGG | + | chr5_2:22865257-22865276 | Msa0763580:CDS | 35.0% | |
| AATTGTCGCCAAGTATTCAA+AGG | + | chr5_2:22865291-22865310 | Msa0763580:CDS | 35.0% | |
| ATTGTGAAAGAACACACCTT+GGG | - | chr5_2:22865353-22865372 | None:intergenic | 35.0% | |
| AATTGTGAAAGAACACACCT+TGG | - | chr5_2:22865354-22865373 | None:intergenic | 35.0% | |
| ! | GTGTTTTGCAGAGTGTAAAT+GGG | - | chr5_2:22865390-22865409 | None:intergenic | 35.0% |
| ! | TGTGTTTTGCAGAGTGTAAA+TGG | - | chr5_2:22865391-22865410 | None:intergenic | 35.0% |
| AATATGTGGAAAGGATCACA+GGG | - | chr5_2:22865415-22865434 | None:intergenic | 35.0% | |
| TAATATGTGGAAAGGATCAC+AGG | - | chr5_2:22865416-22865435 | None:intergenic | 35.0% | |
| CGAAATAGCATATCACAGAA+CGG | + | chr5_2:22865529-22865548 | Msa0763580:intron | 35.0% | |
| TGATCAGTGTTGTCAAATAG+CGG | - | chr5_2:22865604-22865623 | None:intergenic | 35.0% | |
| !! | TTTTGTTTCAGTGGGATGAT+TGG | + | chr5_2:22865877-22865896 | Msa0763580:intron | 35.0% |
| ! | TTTTATGCTTTGCTCAACTG+AGG | + | chr5_2:22865900-22865919 | Msa0763580:CDS | 35.0% |
| TTTATGCTTTGCTCAACTGA+GGG | + | chr5_2:22865901-22865920 | Msa0763580:CDS | 35.0% | |
| TTCTCATCAATAGGATTCAC+CGG | - | chr5_2:22865949-22865968 | None:intergenic | 35.0% | |
| TGGCTATCATTCTCATCAAT+AGG | - | chr5_2:22865958-22865977 | None:intergenic | 35.0% | |
| !!! | GTTTGTTTTAGGCCTCATTA+GGG | - | chr5_2:22866085-22866104 | None:intergenic | 35.0% |
| !!! | AGTTTGTTTTAGGCCTCATT+AGG | - | chr5_2:22866086-22866105 | None:intergenic | 35.0% |
| CAAAAACACAGTATGAGTGT+TGG | - | chr5_2:22866224-22866243 | None:intergenic | 35.0% | |
| TTTAGAAGCAATTGCTCTCT+TGG | - | chr5_2:22866336-22866355 | None:intergenic | 35.0% | |
| TTATTCCACGGTTCATTGAT+GGG | - | chr5_2:22866447-22866466 | None:intergenic | 35.0% | |
| TTTATTCCACGGTTCATTGA+TGG | - | chr5_2:22866448-22866467 | None:intergenic | 35.0% | |
| ! | TGAAGCACTACTTTATTCCA+CGG | - | chr5_2:22866459-22866478 | None:intergenic | 35.0% |
| TGAAAATGAGTTGCAGTTGA+TGG | + | chr5_2:22866509-22866528 | Msa0763580:three_prime_UTR | 35.0% | |
| !! | AGTTGATGGATTCAGTTCTT+AGG | + | chr5_2:22866523-22866542 | Msa0763580:three_prime_UTR | 35.0% |
| AATGAAGTAGGGAAGTCACT+CGG | - | chr5_2:22861466-22861485 | None:intergenic | 40.0% | |
| AAGGGAAAATCTGTGGATTC+AGG | - | chr5_2:22861546-22861565 | None:intergenic | 40.0% | |
| TCTTCTCTTTGCCTCTTCAA+GGG | - | chr5_2:22861564-22861583 | None:intergenic | 40.0% | |
| TTCTTCTCTTTGCCTCTTCA+AGG | - | chr5_2:22861565-22861584 | None:intergenic | 40.0% | |
| GAAGATCAACTACCTCACAA+CGG | + | chr5_2:22861594-22861613 | Msa0763580:CDS | 40.0% | |
| ! | CCATTTGGTTGAGGTTCTTT+TGG | - | chr5_2:22861636-22861655 | None:intergenic | 40.0% |
| CCAAAAGAACCTCAACCAAA+TGG | + | chr5_2:22861633-22861652 | Msa0763580:CDS | 40.0% | |
| TATCTTCTGTTATTCCTGGC+TGG | + | chr5_2:22861658-22861677 | Msa0763580:CDS | 40.0% | |
| !! | TCTCTGAAATTAGCCCAATG+TGG | + | chr5_2:22861682-22861701 | Msa0763580:CDS | 40.0% |
| ! | TGGTATAGTGTCACCTTTTG+AGG | + | chr5_2:22862493-22862512 | Msa0763580:intron | 40.0% |
| TTTCAGCTTTCAGCCTCAAA+AGG | - | chr5_2:22862509-22862528 | None:intergenic | 40.0% | |
| TATTGGTCATAGGGTGAAAG+TGG | + | chr5_2:22862566-22862585 | Msa0763580:intron | 40.0% | |
| TATGTTTGGATGGAGGGTTT+AGG | + | chr5_2:22862606-22862625 | Msa0763580:intron | 40.0% | |
| !! | TTTTCAGGGTCTGTTTCAGA+GGG | - | chr5_2:22862789-22862808 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGTCTGTTTCAG+AGG | - | chr5_2:22862790-22862809 | None:intergenic | 40.0% |
| TTCGCTGCAAACATTTGGTA+TGG | + | chr5_2:22862971-22862990 | Msa0763580:intron | 40.0% | |
| ! | TTTGTTGTAATTTGCAGGGG+AGG | + | chr5_2:22863147-22863166 | Msa0763580:intron | 40.0% |
| !!! | GCAAGGTTCTTGTTTTGGAT+GGG | + | chr5_2:22863338-22863357 | Msa0763580:CDS | 40.0% |
| !!! | CAAGGTTCTTGTTTTGGATG+GGG | + | chr5_2:22863339-22863358 | Msa0763580:CDS | 40.0% |
| ATGAGTGATCATCTCTTGGT+AGG | - | chr5_2:22863395-22863414 | None:intergenic | 40.0% | |
| GAAGATGAGTGATCATCTCT+TGG | - | chr5_2:22863399-22863418 | None:intergenic | 40.0% | |
| CTCAATTCCAAACCCCAAAA+AGG | + | chr5_2:22863426-22863445 | Msa0763580:CDS | 40.0% | |
| GATGGTTGCTTAGAGGAATT+TGG | + | chr5_2:22863590-22863609 | Msa0763580:intron | 40.0% | |
| CTATAAAACAAGTGTGCAGC+AGG | - | chr5_2:22863684-22863703 | None:intergenic | 40.0% | |
| CGTTACAGTGTTGTCAATCT+CGG | + | chr5_2:22863784-22863803 | Msa0763580:intron | 40.0% | |
| GTTACAGTGTTGTCAATCTC+GGG | + | chr5_2:22863785-22863804 | Msa0763580:intron | 40.0% | |
| GCTTTAGCACTGTAGCATAA+TGG | - | chr5_2:22863839-22863858 | None:intergenic | 40.0% | |
| CTGTATGAAATCACGTCTCA+CGG | + | chr5_2:22863876-22863895 | Msa0763580:intron | 40.0% | |
| ACAGCAGCACTATAATGTAG+TGG | - | chr5_2:22863925-22863944 | None:intergenic | 40.0% | |
| ATATGTCGAAGAGAGTAGGA+AGG | + | chr5_2:22863973-22863992 | Msa0763580:intron | 40.0% | |
| CAACATTCCATTCTCAAGAG+TGG | - | chr5_2:22864034-22864053 | None:intergenic | 40.0% | |
| CACTCTTGAGAATGGAATGT+TGG | + | chr5_2:22864032-22864051 | Msa0763580:intron | 40.0% | |
| !! | TGTTAGGTTTTGGTCATTGG+TGG | + | chr5_2:22864144-22864163 | Msa0763580:intron | 40.0% |
| GAAAAAAAAAAAGCGAGGGG+GGG | - | chr5_2:22864652-22864671 | None:intergenic | 40.0% | |
| GGAAAAAAAAAAAGCGAGGG+GGG | - | chr5_2:22864653-22864672 | None:intergenic | 40.0% | |
| CCACGTGTGACACTTAATAT+CGG | + | chr5_2:22864874-22864893 | Msa0763580:CDS | 40.0% | |
| ACTGCATCATAAGTTCCTTC+TGG | - | chr5_2:22865018-22865037 | None:intergenic | 40.0% | |
| GTGGATTCATCTGATCCTAT+TGG | + | chr5_2:22865042-22865061 | Msa0763580:CDS | 40.0% | |
| ! | CTTGCAACCGACTCAAAAAA+GGG | - | chr5_2:22865189-22865208 | None:intergenic | 40.0% |
| !!! | CTTTTTTGAGTCGGTTGCAA+GGG | + | chr5_2:22865188-22865207 | Msa0763580:CDS | 40.0% |
| TGACAGAGCCTTTGAATACT+TGG | - | chr5_2:22865302-22865321 | None:intergenic | 40.0% | |
| TTATGCTTTGCTCAACTGAG+GGG | + | chr5_2:22865902-22865921 | Msa0763580:CDS | 40.0% | |
| !!! | TAAGGGAAGTTTTGGGGTAA+GGG | - | chr5_2:22866044-22866063 | None:intergenic | 40.0% |
| ! | TTTTAGGCCTCATTAGGGTT+TGG | - | chr5_2:22866080-22866099 | None:intergenic | 40.0% |
| ! | AACAAGGGCTTTAGTGACAT+AGG | + | chr5_2:22866158-22866177 | Msa0763580:intron | 40.0% |
| GCTTTAGTGACATAGGACTT+AGG | + | chr5_2:22866165-22866184 | Msa0763580:intron | 40.0% | |
| AAAAGACCCACAAACAAGTC+AGG | - | chr5_2:22866196-22866215 | None:intergenic | 40.0% | |
| ATTGCTCTCTTGGCAAAAGA+TGG | - | chr5_2:22866326-22866345 | None:intergenic | 40.0% | |
| CCAAACCAAACCAAACATGG+CGG | + | chr5_2:22861497-22861516 | Msa0763580:exon | 45.0% | |
| ATCTGTGGATTCAGGAAGTG+TGG | - | chr5_2:22861538-22861557 | None:intergenic | 45.0% | |
| CCTCTTCAAGGGAAAATCTG+TGG | - | chr5_2:22861553-22861572 | None:intergenic | 45.0% | |
| ! | CCACAGATTTTCCCTTGAAG+AGG | + | chr5_2:22861550-22861569 | Msa0763580:CDS | 45.0% |
| CTAATTTCAGAGAACCAGCC+AGG | - | chr5_2:22861675-22861694 | None:intergenic | 45.0% | |
| AAAACGAACCAGGCCACATT+GGG | - | chr5_2:22861698-22861717 | None:intergenic | 45.0% | |
| GTGATGAGAGAAAACGAACC+AGG | - | chr5_2:22861708-22861727 | None:intergenic | 45.0% | |
| GATTGTTAGCTGGTGTGGTT+TGG | + | chr5_2:22861879-22861898 | Msa0763580:intron | 45.0% | |
| AGCGCAGTGTGAGATTTCAA+GGG | + | chr5_2:22862321-22862340 | Msa0763580:intron | 45.0% | |
| AAAGTGGTGATTGAACTCCG+AGG | + | chr5_2:22862582-22862601 | Msa0763580:intron | 45.0% | |
| AAGTGGTGATTGAACTCCGA+GGG | + | chr5_2:22862583-22862602 | Msa0763580:intron | 45.0% | |
| ! | TTGAACTCCGAGGGTATGTT+TGG | + | chr5_2:22862592-22862611 | Msa0763580:intron | 45.0% |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5_2:22862610-22862629 | Msa0763580:intron | 45.0% | |
| TTTCAGGGTCTGTTTCAGAG+GGG | - | chr5_2:22862788-22862807 | None:intergenic | 45.0% | |
| GTTCTTAAGTAGCTCAGTGG+TGG | + | chr5_2:22862823-22862842 | Msa0763580:intron | 45.0% | |
| TCAGGATGTTATGGTCTTCC+AGG | + | chr5_2:22863219-22863238 | Msa0763580:CDS | 45.0% | |
| TAACTGAAGCTGCATGTACC+TGG | - | chr5_2:22863240-22863259 | None:intergenic | 45.0% | |
| GTAGTCAGCAACATATGGCA+AGG | + | chr5_2:22863321-22863340 | Msa0763580:intron | 45.0% | |
| !!! | GGCAAGGTTCTTGTTTTGGA+TGG | + | chr5_2:22863337-22863356 | Msa0763580:CDS | 45.0% |
| GGTCATTCAGCTCACAGAAA+GGG | + | chr5_2:22863360-22863379 | Msa0763580:CDS | 45.0% | |
| ! | GGGTTTGGAATTGAGCAAAG+AGG | - | chr5_2:22863421-22863440 | None:intergenic | 45.0% |
| TCTCGGGATGTGGAAAATAG+TGG | + | chr5_2:22863801-22863820 | Msa0763580:intron | 45.0% | |
| CACGCTTGAAAAGTTACGCA+AGG | - | chr5_2:22864084-22864103 | None:intergenic | 45.0% | |
| !! | TAGGTTTTGGTCATTGGTGG+AGG | + | chr5_2:22864147-22864166 | Msa0763580:intron | 45.0% |
| CATCTTACTTGGGTCCTGTT+TGG | + | chr5_2:22864324-22864343 | Msa0763580:intron | 45.0% | |
| CCGATATTAAGTGTCACACG+TGG | - | chr5_2:22864877-22864896 | None:intergenic | 45.0% | |
| GTGACACTTAATATCGGCGA+TGG | + | chr5_2:22864880-22864899 | Msa0763580:CDS | 45.0% | |
| !! | TTTTTGAAGGCAGCTCCAGA+AGG | + | chr5_2:22865000-22865019 | Msa0763580:CDS | 45.0% |
| ! | CCTTGCAACCGACTCAAAAA+AGG | - | chr5_2:22865190-22865209 | None:intergenic | 45.0% |
| !!! | CCTTTTTTGAGTCGGTTGCA+AGG | + | chr5_2:22865187-22865206 | Msa0763580:CDS | 45.0% |
| ! | GTACTCAGGCGGAAAGTATA+TGG | + | chr5_2:22865235-22865254 | Msa0763580:CDS | 45.0% |
| AAGGCTCTGTCAACTATGCT+TGG | + | chr5_2:22865310-22865329 | Msa0763580:CDS | 45.0% | |
| TGTCAACTATGCTTGGACCA+CGG | + | chr5_2:22865317-22865336 | Msa0763580:CDS | 45.0% | |
| AGAACACACCTTGGGTATGT+AGG | - | chr5_2:22865345-22865364 | None:intergenic | 45.0% | |
| GCAGAGTGTAAATGGGAAAG+TGG | - | chr5_2:22865383-22865402 | None:intergenic | 45.0% | |
| GCTATAGAATTGTCGCAGAG+CGG | - | chr5_2:22865487-22865506 | None:intergenic | 45.0% | |
| ! | CAACACAATTGGTCTCCAAG+AGG | - | chr5_2:22865756-22865775 | None:intergenic | 45.0% |
| CTCTTGGAGACCAATTGTGT+TGG | + | chr5_2:22865754-22865773 | Msa0763580:intron | 45.0% | |
| ! | TTCGGTCGATTTCAAGCATC+CGG | + | chr5_2:22865927-22865946 | Msa0763580:CDS | 45.0% |
| !!! | CTAAGGGAAGTTTTGGGGTA+AGG | - | chr5_2:22866045-22866064 | None:intergenic | 45.0% |
| ! | CAACGCTAAGGGAAGTTTTG+GGG | - | chr5_2:22866050-22866069 | None:intergenic | 45.0% |
| ! | CCAACGCTAAGGGAAGTTTT+GGG | - | chr5_2:22866051-22866070 | None:intergenic | 45.0% |
| ! | GCCTCATTAGGGTTTGGTTT+GGG | - | chr5_2:22866074-22866093 | None:intergenic | 45.0% |
| TAGTGACATAGGACTTAGGC+CGG | + | chr5_2:22866169-22866188 | Msa0763580:intron | 45.0% | |
| GCAAACAGAAAGCTGCTGAA+TGG | - | chr5_2:22866304-22866323 | None:intergenic | 45.0% | |
| !! | TGGGATTGAAAGGGTGCTTA+TGG | + | chr5_2:22866376-22866395 | Msa0763580:three_prime_UTR | 45.0% |
| !! | TAAAAAAAATTAACATAAAA+GGG | - | chr5_2:22862083-22862102 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATTAACATAAA+AGG | - | chr5_2:22862084-22862103 | None:intergenic | 5.0% |
| !!! | TTATTATTATTTTTTTGTTT+AGG | + | chr5_2:22865138-22865157 | Msa0763580:intron | 5.0% |
| !! | CCGCCATGTTTGGTTTGGTT+TGG | - | chr5_2:22861500-22861519 | None:intergenic | 50.0% |
| GTTTCAGAGACACCGTTGTG+AGG | - | chr5_2:22861609-22861628 | None:intergenic | 50.0% | |
| GAAATTAGCCCAATGTGGCC+TGG | + | chr5_2:22861687-22861706 | Msa0763580:CDS | 50.0% | |
| GAAAACGAACCAGGCCACAT+TGG | - | chr5_2:22861699-22861718 | None:intergenic | 50.0% | |
| CAGCGCAGTGTGAGATTTCA+AGG | + | chr5_2:22862320-22862339 | Msa0763580:intron | 50.0% | |
| ! | ACTCCGAGGGTATGTTTGGA+TGG | + | chr5_2:22862596-22862615 | Msa0763580:intron | 50.0% |
| CCTCCATCCAAACATACCCT+CGG | - | chr5_2:22862602-22862621 | None:intergenic | 50.0% | |
| ! | CGAGGGTATGTTTGGATGGA+GGG | + | chr5_2:22862600-22862619 | Msa0763580:intron | 50.0% |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5_2:22862609-22862628 | Msa0763580:intron | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5_2:22862611-22862630 | Msa0763580:intron | 50.0% | |
| !!! | TTTCAGAGGGGGGTTTTGGA+TGG | - | chr5_2:22862776-22862795 | None:intergenic | 50.0% |
| ! | TCTGTTTCAGAGGGGGGTTT+TGG | - | chr5_2:22862780-22862799 | None:intergenic | 50.0% |
| TTCAGGGTCTGTTTCAGAGG+GGG | - | chr5_2:22862787-22862806 | None:intergenic | 50.0% | |
| GGGTCATTCAGCTCACAGAA+AGG | + | chr5_2:22863359-22863378 | Msa0763580:CDS | 50.0% | |
| GTGTTGTCAATCTCGGGATG+TGG | + | chr5_2:22863791-22863810 | Msa0763580:intron | 50.0% | |
| CACGTCTCACGGAGTAATAG+TGG | + | chr5_2:22863887-22863906 | Msa0763580:intron | 50.0% | |
| TTGGTCATTGGTGGAGGAGA+TGG | + | chr5_2:22864153-22864172 | Msa0763580:CDS | 50.0% | |
| GAGATACCCACCCAACTTGA+AGG | - | chr5_2:22864674-22864693 | None:intergenic | 50.0% | |
| ! | GATTTTAGGCCGCATGACGA+AGG | - | chr5_2:22864731-22864750 | None:intergenic | 50.0% |
| TGAGTACACACAACACCTCC+TGG | - | chr5_2:22865222-22865241 | None:intergenic | 50.0% | |
| !! | AGGAGGTGTTGTGTGTACTC+AGG | + | chr5_2:22865221-22865240 | Msa0763580:CDS | 50.0% |
| ! | AGGTGTTGTGTGTACTCAGG+CGG | + | chr5_2:22865224-22865243 | Msa0763580:CDS | 50.0% |
| GGATGCTTGAAATCGACCGA+AGG | - | chr5_2:22865928-22865947 | None:intergenic | 50.0% | |
| GAGAATGATAGCCAGCATGC+AGG | + | chr5_2:22865964-22865983 | Msa0763580:CDS | 50.0% | |
| TCAATGGTCTTCCTGCATGC+TGG | - | chr5_2:22865978-22865997 | None:intergenic | 50.0% | |
| CCCAAAACTTCCCTTAGCGT+TGG | + | chr5_2:22866048-22866067 | Msa0763580:intron | 50.0% | |
| ! | GCCAACGCTAAGGGAAGTTT+TGG | - | chr5_2:22866052-22866071 | None:intergenic | 50.0% |
| !! | TTGGTTTGGGCCAACGCTAA+GGG | - | chr5_2:22866061-22866080 | None:intergenic | 50.0% |
| !! | TTTGGTTTGGGCCAACGCTA+AGG | - | chr5_2:22866062-22866081 | None:intergenic | 50.0% |
| GCCCAAACCAAACCCTAATG+AGG | + | chr5_2:22866070-22866089 | Msa0763580:intron | 50.0% | |
| ! | GGCCTCATTAGGGTTTGGTT+TGG | - | chr5_2:22866075-22866094 | None:intergenic | 50.0% |
| ACCCACAAACAAGTCAGGAC+CGG | - | chr5_2:22866191-22866210 | None:intergenic | 50.0% | |
| ! | ACGGTTCATTGATGGGCAGA+TGG | - | chr5_2:22866440-22866459 | None:intergenic | 50.0% |
| ATCTGCCCATCAATGAACCG+TGG | + | chr5_2:22866439-22866458 | Msa0763580:three_prime_UTR | 50.0% | |
| ! | GGAAGTCACTCGGTTCGTGT+GGG | - | chr5_2:22861456-22861475 | None:intergenic | 55.0% |
| TGCTGCCGCCATGTTTGGTT+TGG | - | chr5_2:22861505-22861524 | None:intergenic | 55.0% | |
| ! | CCGAGGGTATGTTTGGATGG+AGG | + | chr5_2:22862599-22862618 | Msa0763580:intron | 55.0% |
| TCAGGGTCTGTTTCAGAGGG+GGG | - | chr5_2:22862786-22862805 | None:intergenic | 55.0% | |
| AGGGGAGGCTCACTCATTGA+AGG | + | chr5_2:22863162-22863181 | Msa0763580:intron | 55.0% | |
| GGAGGCTCACTCATTGAAGG+TGG | + | chr5_2:22863165-22863184 | Msa0763580:CDS | 55.0% | |
| AGCAGGAGTTAGCACGGTGA+CGG | - | chr5_2:22863667-22863686 | None:intergenic | 55.0% | |
| GTGTGCAGCAGGAGTTAGCA+CGG | - | chr5_2:22863673-22863692 | None:intergenic | 55.0% | |
| GTCATTGGTGGAGGAGATGG+AGG | + | chr5_2:22864156-22864175 | Msa0763580:CDS | 55.0% | |
| AATGGCGTGAAACTTCCCGC+AGG | - | chr5_2:22864185-22864204 | None:intergenic | 55.0% | |
| GGAGAGGCAGACTGAGACTA+GGG | - | chr5_2:22864631-22864650 | None:intergenic | 55.0% | |
| AAAAAAAGCGAGGGGGGGAG+AGG | - | chr5_2:22864647-22864666 | None:intergenic | 55.0% | |
| CCTTGGGTATGTAGGAACCG+TGG | - | chr5_2:22865337-22865356 | None:intergenic | 55.0% | |
| CCACGGTTCCTACATACCCA+AGG | + | chr5_2:22865334-22865353 | Msa0763580:CDS | 55.0% | |
| TTGCTCAACTGAGGGGCCTT+CGG | + | chr5_2:22865909-22865928 | Msa0763580:CDS | 55.0% | |
| !! | GCCGGTCCTGACTTGTTTGT+GGG | + | chr5_2:22866187-22866206 | Msa0763580:intron | 55.0% |
| ! | GGGAAGTCACTCGGTTCGTG+TGG | - | chr5_2:22861457-22861476 | None:intergenic | 60.0% |
| TCTGCTGCTGCCGCCATGTT+TGG | - | chr5_2:22861510-22861529 | None:intergenic | 60.0% | |
| GCAGGAGTTAGCACGGTGAC+GGG | - | chr5_2:22863666-22863685 | None:intergenic | 60.0% | |
| GAGGAGATGGAGGAGTCCTG+CGG | + | chr5_2:22864166-22864185 | Msa0763580:CDS | 60.0% | |
| AGGAGATGGAGGAGTCCTGC+GGG | + | chr5_2:22864167-22864186 | Msa0763580:CDS | 60.0% | |
| GGGAGAGGCAGACTGAGACT+AGG | - | chr5_2:22864632-22864651 | None:intergenic | 60.0% | |
| GTTGCAAGGGCTCTTCGTCC+AGG | + | chr5_2:22865201-22865220 | Msa0763580:CDS | 60.0% | |
| !! | GGCCGGTCCTGACTTGTTTG+TGG | + | chr5_2:22866186-22866205 | Msa0763580:intron | 60.0% |
| GCAAGGGCTCTTCGTCCAGG+AGG | + | chr5_2:22865204-22865223 | Msa0763580:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 22861444 | 22866707 | 22861444 | ID=Msa0763580;Name=Msa0763580 |
| chr5_2 | mRNA | 22861444 | 22866707 | 22861444 | ID=Msa0763580-mRNA-1;Parent=Msa0763580;Name=Msa0763580-mRNA-1;_AED=0.15;_eAED=0.15;_QI=69|1|1|1|1|1|9|343|344 |
| chr5_2 | exon | 22861444 | 22861708 | 22861444 | ID=Msa0763580-mRNA-1:exon:9350;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22863164 | 22863240 | 22863164 | ID=Msa0763580-mRNA-1:exon:9351;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22863325 | 22863447 | 22863325 | ID=Msa0763580-mRNA-1:exon:9352;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22864150 | 22864254 | 22864150 | ID=Msa0763580-mRNA-1:exon:9353;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22864829 | 22864901 | 22864829 | ID=Msa0763580-mRNA-1:exon:9354;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22864992 | 22865063 | 22864992 | ID=Msa0763580-mRNA-1:exon:9355;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22865160 | 22865355 | 22865160 | ID=Msa0763580-mRNA-1:exon:9356;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22865888 | 22866014 | 22865888 | ID=Msa0763580-mRNA-1:exon:9357;Parent=Msa0763580-mRNA-1 |
| chr5_2 | exon | 22866299 | 22866707 | 22866299 | ID=Msa0763580-mRNA-1:exon:9358;Parent=Msa0763580-mRNA-1 |
| chr5_2 | five_prime_UTR | 22861444 | 22861512 | 22861444 | ID=Msa0763580-mRNA-1:five_prime_utr;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22861513 | 22861708 | 22861513 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22863164 | 22863240 | 22863164 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22863325 | 22863447 | 22863325 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22864150 | 22864254 | 22864150 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22864829 | 22864901 | 22864829 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22864992 | 22865063 | 22864992 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22865160 | 22865355 | 22865160 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22865888 | 22866014 | 22865888 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | CDS | 22866299 | 22866364 | 22866299 | ID=Msa0763580-mRNA-1:cds;Parent=Msa0763580-mRNA-1 |
| chr5_2 | three_prime_UTR | 22866365 | 22866707 | 22866365 | ID=Msa0763580-mRNA-1:three_prime_utr;Parent=Msa0763580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
