AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419850 MtrunA17_Chr7g0256201 99.862 726 1 0 1 726 1 726 0.0 1495
Msa1419850 MtrunA17_Chr3g0089281 24.497 596 387 21 114 676 68 633 1.13e-29 126
Msa1419850 MtrunA17_Chr3g0122961 24.513 616 381 24 91 663 8 582 1.14e-28 123
Msa1419850 MtrunA17_Chr1g0172461 25.714 280 174 9 356 631 241 490 5.15e-16 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419850 AT5G04130.1 76.454 722 167 2 8 726 11 732 0.0 1103
Msa1419850 AT3G10270.2 77.317 723 155 5 9 726 22 740 0.0 1085
Msa1419850 AT3G10270.1 77.317 723 155 5 9 726 12 730 0.0 1084
Msa1419850 AT5G04130.2 73.253 501 131 2 8 505 11 511 0.0 716
Msa1419850 AT5G04130.3 73.253 501 131 2 8 505 11 511 0.0 716
Msa1419850 AT5G04110.2 58.730 252 94 3 282 530 17 261 1.17e-91 296
Msa1419850 AT5G04110.4 58.730 252 93 4 282 530 17 260 2.74e-90 291
Msa1419850 AT5G04110.1 58.730 252 93 4 282 530 17 260 4.60e-90 292
Msa1419850 AT5G04110.3 58.730 252 93 4 282 530 17 260 4.60e-90 292
Msa1419850 AT3G23890.2 25.042 591 379 23 97 663 68 618 8.20e-32 134
Msa1419850 AT3G23890.1 25.042 591 379 23 97 663 68 618 9.99e-32 133

Find 198 sgRNAs with CRISPR-Local

Find 696 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCAGGTTTATGAAATTT+TGG 0.159609 tig0024731:+18974 Msa1419850:intron
CAAGACCAAGGATTAAATTT+TGG 0.168010 tig0024731:-26852 None:intergenic
AGAATATCTTACCGAGTATT+TGG 0.173108 tig0024731:+25053 Msa1419850:CDS
AAGGAACACGTATCAAATTT+TGG 0.211413 tig0024731:+20218 Msa1419850:CDS
TCTTCCTCTCCTTCGCTTCA+TGG 0.217768 tig0024731:+17833 Msa1419850:CDS
TGTCCTTCAAACTCTGGATT+TGG 0.228780 tig0024731:-24851 None:intergenic
TAAGTTATTGAAAGTTATTC+AGG 0.261178 tig0024731:-29051 None:intergenic
TTGCACGCTGGTGGAAAATT+TGG 0.282779 tig0024731:+19734 Msa1419850:CDS
AACAGTGGCTACTCTGTTTC+AGG 0.289484 tig0024731:+19764 Msa1419850:CDS
TCAGTAGCAGAGTTCGAATA+TGG 0.289875 tig0024731:-27521 None:intergenic
TTATGGTTCTGATCAAATTC+AGG 0.299995 tig0024731:+18277 Msa1419850:CDS
TTCTTCAATAACCTCTGTTC+TGG 0.306840 tig0024731:-28176 None:intergenic
AAGCTTTCATACCATCGATA+TGG 0.316017 tig0024731:-23984 None:intergenic
CCCGCGCGGGTTGCATCATT+TGG 0.316736 tig0024731:+18869 Msa1419850:CDS
GTCCTTCAAACTCTGGATTT+GGG 0.319431 tig0024731:-24850 None:intergenic
AAGGACAGTTCTAAAGCTTA+TGG 0.320311 tig0024731:+18260 Msa1419850:CDS
AAAAGGCCTGGGATGTATAT+TGG 0.326533 tig0024731:+18837 Msa1419850:CDS
AAAGCAGATTTCTTTGTAGT+TGG 0.341350 tig0024731:-19582 None:intergenic
TGCAGGCTATTCTCCCTTTG+AGG 0.348316 tig0024731:+26770 Msa1419850:intron
ACTACTTTACCTTTGGGTTA+AGG 0.353650 tig0024731:-20416 None:intergenic
GCATGTTGTATGATGCATTA+GGG 0.354230 tig0024731:-27893 None:intergenic
TTTGTCTCATTAGGCAGCTT+TGG 0.359300 tig0024731:+25259 Msa1419850:intron
GACTGGACCCTGTAAGAAAA+AGG 0.359626 tig0024731:+18820 Msa1419850:CDS
TGCATGTTGTATGATGCATT+AGG 0.366179 tig0024731:-27894 None:intergenic
GAGTAGTCATTTGCAGTTGC+TGG 0.383503 tig0024731:+28837 Msa1419850:three_prime_UTR
CAAAATTTAATCCTTGGTCT+TGG 0.385483 tig0024731:+26853 Msa1419850:CDS
AACAGTATGGCGTGAAGGGC+TGG 0.389354 tig0024731:+20114 Msa1419850:CDS
TTGAGATCTTCATCTCTTCC+TGG 0.393346 tig0024731:+25323 Msa1419850:CDS
TAAAGCTCTGAATGCTTTCA+AGG 0.394460 tig0024731:+25110 Msa1419850:CDS
GCAGGCTATTCTCCCTTTGA+GGG 0.403577 tig0024731:+26771 Msa1419850:intron
GAGATCCAAAATTTAATCCT+TGG 0.403824 tig0024731:+26847 Msa1419850:CDS
TCAACCACTTTCCGCACCTC+TGG 0.409033 tig0024731:-25018 None:intergenic
TTTCCTCCCTTATGGGTGCT+CGG 0.417292 tig0024731:+28237 Msa1419850:CDS
TTAATCCTTGGTCTTGGTCT+CGG 0.420394 tig0024731:+26859 Msa1419850:CDS
TCTAATGAGTATTTCTATGC+TGG 0.421243 tig0024731:+21807 Msa1419850:CDS
CAGAGAGCTTTGTTTGATGA+AGG 0.424517 tig0024731:+27680 Msa1419850:intron
TACGATTGCGCTTCGGAAAG+AGG 0.426290 tig0024731:+21761 Msa1419850:CDS
AGCACTGAATCAAGAACATC+TGG 0.429077 tig0024731:-25084 None:intergenic
GGCGCTCCTGTTGTGTTCCT+CGG 0.429491 tig0024731:+28772 Msa1419850:three_prime_UTR
TTACCTGGGTTTAGAGAGAA+TGG 0.430789 tig0024731:-17919 None:intergenic
TTTGTTTGTCCTTCAAACTC+TGG 0.431218 tig0024731:-24857 None:intergenic
TGTTGCATAAAGACGAGGTT+GGG 0.433775 tig0024731:+24991 Msa1419850:intron
GTCCCTAGTTTGGTGTCAAA+TGG 0.435311 tig0024731:+18182 Msa1419850:CDS
AGGTCGTGATAGGCGCTTCC+AGG 0.437540 tig0024731:+25941 Msa1419850:CDS
CATAGAAATACTCATTAGAT+TGG 0.437881 tig0024731:-21803 None:intergenic
GGAGAGGAAGACGACGTAGT+AGG 0.439782 tig0024731:-17821 None:intergenic
CATGATTGATCTTGATCAGC+TGG 0.439797 tig0024731:+28619 Msa1419850:CDS
TCTGTTTCAGGAGGTTTACA+TGG 0.440691 tig0024731:+19776 Msa1419850:CDS
GAACAATCCGCGAGTTTGCC+AGG 0.442861 tig0024731:-25341 None:intergenic
AAAATTTGATACGTGTTCCT+TGG 0.443461 tig0024731:-20216 None:intergenic
ACACAATAGCTGGACGCATA+AGG 0.444974 tig0024731:+20382 Msa1419850:CDS
TGCTTTAGAGACAGTGTTGA+CGG 0.445996 tig0024731:+19599 Msa1419850:CDS
AAAGAAGACATATAAGCTCT+TGG 0.447036 tig0024731:-18212 None:intergenic
GCAATTTCTTAACACGGATA+AGG 0.447284 tig0024731:+21848 Msa1419850:CDS
CCATATGAACCTTCTTTGTC+AGG 0.448685 tig0024731:-20241 None:intergenic
TGGATATTTGATGATGCAAC+AGG 0.448689 tig0024731:+28639 Msa1419850:exon
TCAGGAGGTTTACATGGTGT+TGG 0.449866 tig0024731:+19782 Msa1419850:CDS
CTAATGAGTATTTCTATGCT+GGG 0.453046 tig0024731:+21808 Msa1419850:CDS
TTACTTGTGTAGGTACTTGA+AGG 0.453872 tig0024731:+18798 Msa1419850:intron
TGGTGTTCCACCACTTTACA+AGG 0.453906 tig0024731:+27715 Msa1419850:CDS
AGTTTCAGAAAAGAAATAGA+TGG 0.459840 tig0024731:+23573 Msa1419850:CDS
AAATAATAATCTTGTGATAA+CGG 0.460897 tig0024731:-27473 None:intergenic
GTGCTAAGCAAGGTCGTGAT+AGG 0.462678 tig0024731:+25931 Msa1419850:CDS
GGAAAACACAATATTTGCTT+CGG 0.469868 tig0024731:-28219 None:intergenic
TTCCTCCCTTATGGGTGCTC+GGG 0.469917 tig0024731:+28238 Msa1419850:CDS
AACATATTCTCGTGGGAAGC+CGG 0.473111 tig0024731:+20147 Msa1419850:CDS
ATTTATATCAGGTGGATGTT+CGG 0.481417 tig0024731:+28570 Msa1419850:intron
TGTAGCTTACGATTGCGCTT+CGG 0.481540 tig0024731:+21754 Msa1419850:intron
ATAGTTGAAGGTGATTCAGC+TGG 0.482769 tig0024731:+25903 Msa1419850:CDS
GAATGAAGACGGAAGGAAGA+GGG 0.483438 tig0024731:-17876 None:intergenic
GGGATGTATATTGGAAGCAC+TGG 0.484327 tig0024731:+18846 Msa1419850:CDS
GATTTGAATGGATTATTCAC+TGG 0.484895 tig0024731:+28807 Msa1419850:three_prime_UTR
AGCTTTCATACCATCGATAT+GGG 0.486541 tig0024731:-23983 None:intergenic
TTTGAGTACAACACAATAGC+TGG 0.487175 tig0024731:+20372 Msa1419850:CDS
CACAATAGCTGGACGCATAA+GGG 0.490264 tig0024731:+20383 Msa1419850:CDS
ATGTAAAACAACATCAATCT+TGG 0.490376 tig0024731:-19033 None:intergenic
CTGCAAATGACTACTCCATC+TGG 0.493027 tig0024731:-28830 None:intergenic
ACATTACCCGAGCACCCATA+AGG 0.493306 tig0024731:-28244 None:intergenic
TTTGATGATGCAACAGGGTG+TGG 0.495715 tig0024731:+28645 Msa1419850:exon
ACACCATTTGACACCAAACT+AGG 0.495830 tig0024731:-18185 None:intergenic
AAACAAAGAAGAAGATAGAG+AGG 0.497224 tig0024731:+17737 Msa1419850:five_prime_UTR
AGAGATATACCACAGTCTTC+AGG 0.498262 tig0024731:-25374 None:intergenic
AGCATTGCTGACAATGGTCG+CGG 0.500989 tig0024731:+19071 Msa1419850:CDS
GTTGTCTCCCACAGTTGTAA+AGG 0.501371 tig0024731:-28146 None:intergenic
AGGAACACAACAGGAGCGCC+TGG 0.504535 tig0024731:-28769 None:intergenic
ATGCCACCGAGGAACACAAC+AGG 0.504646 tig0024731:-28778 None:intergenic
AAAGAAATCAAAAGTTATCA+AGG 0.505346 tig0024731:+24035 Msa1419850:CDS
ACTGAAATCGGCAGGTTACA+AGG 0.507108 tig0024731:+27808 Msa1419850:intron
TAACTTTCAATAACTTAGCA+AGG 0.512180 tig0024731:+29057 Msa1419850:three_prime_UTR
AGCTGAAGATATTCATAAGA+AGG 0.512986 tig0024731:+18241 Msa1419850:CDS
CAGTAGCAGAGTTCGAATAT+GGG 0.513838 tig0024731:-27520 None:intergenic
TAACCTCTGTTCTGGATCCA+TGG 0.515088 tig0024731:-28168 None:intergenic
GCATACTCCGATACAATACT+AGG 0.515496 tig0024731:+23925 Msa1419850:CDS
TTGCAGATCTTGCACGCTGG+TGG 0.517780 tig0024731:+19725 Msa1419850:intron
TAGTTGAAGGTGATTCAGCT+GGG 0.520256 tig0024731:+25904 Msa1419850:CDS
AGAATGAAGACGGAAGGAAG+AGG 0.520441 tig0024731:-17877 None:intergenic
AGTAGTCATTTGCAGTTGCT+GGG 0.522628 tig0024731:+28838 Msa1419850:three_prime_UTR
TGCGAGAAGCCATGAAGCGA+AGG 0.524023 tig0024731:-17842 None:intergenic
TTCAGAATCTTACCCCTCAA+AGG 0.524421 tig0024731:-26784 None:intergenic
AGCTGGACGCATAAGGGAGT+TGG 0.528020 tig0024731:+20389 Msa1419850:CDS
TGTTTCTCTTAATTGAAGCC+AGG 0.529577 tig0024731:+28751 Msa1419850:three_prime_UTR
ATCTCTTCCTGGCAAACTCG+CGG 0.533566 tig0024731:+25334 Msa1419850:CDS
GACATAATCAAACACAGCTC+AGG 0.534495 tig0024731:-28989 None:intergenic
GCTGTTGATGAAGCTCAAGC+TGG 0.534932 tig0024731:+19002 Msa1419850:CDS
TGTGTAGGTACTTGAAGGAC+TGG 0.535312 tig0024731:+18803 Msa1419850:intron
TGGATTATTCACTGGCCAGA+TGG 0.535649 tig0024731:+28815 Msa1419850:three_prime_UTR
AGAGGACAATGATCCAGAAA+AGG 0.537761 tig0024731:+21779 Msa1419850:CDS
CACGCTGGTGGAAAATTTGG+TGG 0.538212 tig0024731:+19737 Msa1419850:CDS
TACAACATGCAAAGGTTCAA+AGG 0.538411 tig0024731:+27906 Msa1419850:CDS
TGGTCTTGGTCTCGGAGTGA+AGG 0.539696 tig0024731:+26867 Msa1419850:CDS
GAAAAGGATATTACTCTAAG+TGG 0.544727 tig0024731:+24782 Msa1419850:CDS
CATTACCCGAGCACCCATAA+GGG 0.549853 tig0024731:-28243 None:intergenic
GTCCCAAATCCAGAGTTTGA+AGG 0.550348 tig0024731:+24848 Msa1419850:CDS
AAATCCAGAGGTGCGGAAAG+TGG 0.550752 tig0024731:+25014 Msa1419850:CDS
AGGCACTAGAGGTAACAGTA+TGG 0.552404 tig0024731:+20101 Msa1419850:intron
TCAGAATCTTACCCCTCAAA+GGG 0.554307 tig0024731:-26783 None:intergenic
AGGTAACAGTATGGCGTGAA+GGG 0.554577 tig0024731:+20110 Msa1419850:CDS
AGCATATCCTAGTATTGTAT+CGG 0.555137 tig0024731:-23932 None:intergenic
ATCAAACACAGCTCAGGAGC+TGG 0.555693 tig0024731:-28983 None:intergenic
GAGATGAAGAAGAATGAAGA+CGG 0.558235 tig0024731:-17887 None:intergenic
TTGGAAGCACTGGCCCGCGC+GGG 0.559486 tig0024731:+18856 Msa1419850:CDS
GAAGCCATGAAGCGAAGGAG+AGG 0.561035 tig0024731:-17837 None:intergenic
GAGGTTATTGAAGAAGTTGA+CGG 0.561393 tig0024731:+28184 Msa1419850:CDS
TGAAGAAGAATGAAGACGGA+AGG 0.562978 tig0024731:-17883 None:intergenic
CCAAATGATGCAACCCGCGC+GGG 0.564692 tig0024731:-18869 None:intergenic
AACATGTGTTGTCTCAGTCA+AGG 0.567792 tig0024731:+24826 Msa1419850:CDS
CAGGCTATTCTCCCTTTGAG+GGG 0.567795 tig0024731:+26772 Msa1419850:intron
TCCAACTCCACAGGCACTAG+AGG 0.567807 tig0024731:+20090 Msa1419850:intron
CTTGACTACGATGTAATGTA+TGG 0.572986 tig0024731:-28694 None:intergenic
AACTTTCAATAACTTAGCAA+GGG 0.573888 tig0024731:+29058 Msa1419850:three_prime_UTR
GATTCTGAACATTGAAAGGA+GGG 0.574792 tig0024731:+26798 Msa1419850:CDS
GCATTGCTGACAATGGTCGC+GGG 0.575570 tig0024731:+19072 Msa1419850:CDS
GGAAGACGACGTAGTAGGAC+TGG 0.576133 tig0024731:-17816 None:intergenic
CTGAAATCGGCAGGTTACAA+GGG 0.576583 tig0024731:+27809 Msa1419850:intron
ATATCAGGTGGATGTTCGGA+AGG 0.578243 tig0024731:+28574 Msa1419850:intron
GATGATGCCTTTACAACTGT+GGG 0.578912 tig0024731:+28139 Msa1419850:CDS
ATTACATCGTAGTCAAGCAC+AGG 0.579550 tig0024731:+28700 Msa1419850:three_prime_UTR
GTAAGATTCTGAACATTGAA+AGG 0.581320 tig0024731:+26794 Msa1419850:CDS
TGTTGTTAACGCCTTGTCTG+AGG 0.583222 tig0024731:+19811 Msa1419850:CDS
AGTGGAGAGCATGTGAGAGA+AGG 0.583912 tig0024731:+24800 Msa1419850:CDS
TCAAGGCAAACCTTGTAAAG+TGG 0.585584 tig0024731:-27725 None:intergenic
GTTGGCTTTCCTTAACCCAA+AGG 0.585656 tig0024731:+20407 Msa1419850:CDS
GAGGTAACAGTATGGCGTGA+AGG 0.587049 tig0024731:+20109 Msa1419850:CDS
GATGAAGGTTACATATACGT+TGG 0.588169 tig0024731:+27695 Msa1419850:CDS
ATTGGAAGCACTGGCCCGCG+CGG 0.589460 tig0024731:+18855 Msa1419850:CDS
TAATGAGTATTTCTATGCTG+GGG 0.590247 tig0024731:+21809 Msa1419850:CDS
GTAGTTGGATGCATGTCGGT+AGG 0.591424 tig0024731:-19567 None:intergenic
TACACACAAACATATTCTCG+TGG 0.596845 tig0024731:+20139 Msa1419850:CDS
ACAAGAACACTAAATAGTCT+CGG 0.596868 tig0024731:+24012 Msa1419850:CDS
ATGCATCATACAACATGCAA+AGG 0.597009 tig0024731:+27898 Msa1419850:CDS
CACCATTTGACACCAAACTA+GGG 0.599593 tig0024731:-18184 None:intergenic
GGCACCATCGACATCAGCAT+CGG 0.600857 tig0024731:-27499 None:intergenic
TTGTTGCATAAAGACGAGGT+TGG 0.601504 tig0024731:+24990 Msa1419850:intron
GTGCTTCCAATATACATCCC+AGG 0.604777 tig0024731:-18843 None:intergenic
CTTTGTAGTTGGATGCATGT+CGG 0.606927 tig0024731:-19571 None:intergenic
TTGACCGATGCTGATGTCGA+TGG 0.608994 tig0024731:+27495 Msa1419850:CDS
AATGAGTATTTCTATGCTGG+GGG 0.609030 tig0024731:+21810 Msa1419850:CDS
AGGCAAACCTTGTAAAGTGG+TGG 0.609917 tig0024731:-27722 None:intergenic
AACAAAGAAGAAGATAGAGA+GGG 0.611484 tig0024731:+17738 Msa1419850:five_prime_UTR
ACCATTGTCAGCAATGCTGA+CGG 0.614856 tig0024731:-19066 None:intergenic
AATAGTATACGCACTGTCGA+CGG 0.616506 tig0024731:+23955 Msa1419850:CDS
TCCGTCAGCATTGCTGACAA+TGG 0.616630 tig0024731:+19065 Msa1419850:CDS
ACTTTCAATAACTTAGCAAG+GGG 0.621472 tig0024731:+29059 Msa1419850:three_prime_UTR
ACACAGTTCAGAGTTGTCAC+CGG 0.623220 tig0024731:-20166 None:intergenic
TGGATGCAGTTCCAAATACT+CGG 0.624680 tig0024731:-25064 None:intergenic
ATATGTGCAATTTCTTAACA+CGG 0.626888 tig0024731:+21842 Msa1419850:CDS
GGTTTAGAGAGAATGGAAAG+TGG 0.627190 tig0024731:-17912 None:intergenic
GCTCCTGTTGTGTTCCTCGG+TGG 0.630839 tig0024731:+28775 Msa1419850:three_prime_UTR
AGATTCTGAACATTGAAAGG+AGG 0.630976 tig0024731:+26797 Msa1419850:CDS
GACGGTGGCACCCATATCGA+TGG 0.634464 tig0024731:+23973 Msa1419850:CDS
AGTGGCTACTCTGTTTCAGG+AGG 0.634936 tig0024731:+19767 Msa1419850:CDS
AGTTGAAGGTGATTCAGCTG+GGG 0.636553 tig0024731:+25905 Msa1419850:CDS
TTTCCATTCTCTCTAAACCC+AGG 0.637331 tig0024731:+17916 Msa1419850:CDS
AGAGTTTGAAGGACAAACAA+AGG 0.638297 tig0024731:+24859 Msa1419850:CDS
AGATGATGCCTTTACAACTG+TGG 0.639512 tig0024731:+28138 Msa1419850:CDS
ACACACAAACATATTCTCGT+GGG 0.640066 tig0024731:+20140 Msa1419850:CDS
CAGTTGATATAGCTTTGCAA+TGG 0.641471 tig0024731:+23601 Msa1419850:CDS
ACAACTGTGGGAGACAACCA+TGG 0.641810 tig0024731:+28151 Msa1419850:CDS
GTACTCAAATTCAATAGCGG+TGG 0.644121 tig0024731:-20358 None:intergenic
ACCAAATGATGCAACCCGCG+CGG 0.647601 tig0024731:-18870 None:intergenic
TGAAATCGGCAGGTTACAAG+GGG 0.647860 tig0024731:+27810 Msa1419850:intron
TTCGAAAATAAAGATCGCCA+AGG 0.647900 tig0024731:+20199 Msa1419850:CDS
CATGTTGTATGATGCATTAG+GGG 0.650685 tig0024731:-27892 None:intergenic
GTTGTACTCAAATTCAATAG+CGG 0.652626 tig0024731:-20361 None:intergenic
AAATTTGGTGGCATCAACAG+TGG 0.656089 tig0024731:+19749 Msa1419850:CDS
ACTTTGCAGATCTTGCACGC+TGG 0.658529 tig0024731:+19722 Msa1419850:intron
GTTGAAGGTGATTCAGCTGG+GGG 0.658831 tig0024731:+25906 Msa1419850:CDS
AGGAAGATGTACCTCAGACA+AGG 0.662689 tig0024731:-19822 None:intergenic
GGTTGGGAAATCCAGAGGTG+CGG 0.666328 tig0024731:+25007 Msa1419850:CDS
CATTGCTGACAATGGTCGCG+GGG 0.666738 tig0024731:+19073 Msa1419850:CDS
GACGAGGTTGGGAAATCCAG+AGG 0.668643 tig0024731:+25002 Msa1419850:intron
AGTATACGCACTGTCGACGG+TGG 0.670255 tig0024731:+23958 Msa1419850:CDS
TACCCGAGCACCCATAAGGG+AGG 0.681093 tig0024731:-28240 None:intergenic
TCATCAAATCCTGAAGACTG+TGG 0.689684 tig0024731:+25365 Msa1419850:CDS
TCACTCCGAGACCAAGACCA+AGG 0.700791 tig0024731:-26864 None:intergenic
GGATATTTGATGATGCAACA+GGG 0.718141 tig0024731:+28640 Msa1419850:exon
CAACCATGGATCCAGAACAG+AGG 0.750984 tig0024731:+28165 Msa1419850:CDS
TGTTTGTGAAGTGAATACAA+TGG 0.795422 tig0024731:+17791 Msa1419850:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAAAAATTTGATTTTTT+TGG + tig0024731:18031-18050 Msa1419850:intron 10.0%
!! AAAAATCATTTATTTGAAAA+AGG - tig0024731:20757-20776 None:intergenic 10.0%
!!! AAAATAATAAAAGAGATTTT+TGG + tig0024731:21005-21024 Msa1419850:intron 10.0%
!!! AAAGTCTTATAAAAAAAATA+TGG + tig0024731:24291-24310 Msa1419850:intron 10.0%
!!! ATTTCAAAAAAGAAATATTT+TGG - tig0024731:25240-25259 None:intergenic 10.0%
!!! AATTTTTTATTAGAAGAATA+GGG + tig0024731:26136-26155 Msa1419850:intron 10.0%
!! AATACAATAATTAGAAAATT+GGG - tig0024731:26621-26640 None:intergenic 10.0%
!! AAATACAATAATTAGAAAAT+TGG - tig0024731:26622-26641 None:intergenic 10.0%
!! TAATAGAAAATTAATTAAAC+AGG - tig0024731:26904-26923 None:intergenic 10.0%
!!! GTTTAATTAATTTTCTATTA+AGG + tig0024731:26904-26923 Msa1419850:intron 10.0%
!!! TTTTATGTTTTATAAATGTA+GGG + tig0024731:28108-28127 Msa1419850:intron 10.0%
!! TAAATTAAAAATTCAGATTA+TGG - tig0024731:28550-28569 None:intergenic 10.0%
!!! TTGTTTTTGTTTTTTTTTTC+AGG + tig0024731:18132-18151 Msa1419850:intron 15.0%
!!! TTATTTAGTCTTGTAAATTT+TGG + tig0024731:18607-18626 Msa1419850:intron 15.0%
!! AAAAAAAAAAAAACACAATG+AGG - tig0024731:19167-19186 None:intergenic 15.0%
!! AAAACAAAATATAAATGTGA+TGG - tig0024731:20006-20025 None:intergenic 15.0%
!!! TCTTTTATGTTAGATATTAA+AGG + tig0024731:20607-20626 Msa1419850:intron 15.0%
!!! TCTTTTTTTTTTAAACAAGA+AGG - tig0024731:20797-20816 None:intergenic 15.0%
!! TGTTTAAAAAAAAAAGATTG+TGG + tig0024731:20800-20819 Msa1419850:intron 15.0%
!! GTTTAAAAAAAAAAGATTGT+GGG + tig0024731:20801-20820 Msa1419850:intron 15.0%
!!! AGATAAACATGTTTTAATTA+AGG + tig0024731:22181-22200 Msa1419850:intron 15.0%
!!! TTTGTAATTTGTTAACATTT+GGG + tig0024731:23011-23030 Msa1419850:intron 15.0%
!!! TAATACATAATTAGCTATTT+TGG - tig0024731:23461-23480 None:intergenic 15.0%
!!! AGCTAATTATGTATTATTTT+TGG + tig0024731:23465-23484 Msa1419850:intron 15.0%
!!! TATTACTTATTACACAATTT+TGG + tig0024731:24531-24550 Msa1419850:intron 15.0%
!! AAAAATTGAATTTCAAAACA+TGG - tig0024731:26123-26142 None:intergenic 15.0%
!!! CAATTTTTTATTAGAAGAAT+AGG + tig0024731:26135-26154 Msa1419850:intron 15.0%
!!! ATTTTTTATTAGAAGAATAG+GGG + tig0024731:26137-26156 Msa1419850:intron 15.0%
!!! GTTTAATCTTTTAGAAATTT+TGG - tig0024731:26209-26228 None:intergenic 15.0%
!!! AGGAAATTTAAAATTATTGT+GGG + tig0024731:26529-26548 Msa1419850:intron 15.0%
!! TAATTATTGTATTTAATCAC+TGG + tig0024731:26628-26647 Msa1419850:intron 15.0%
!!! GTTTAAGTTTATGTATTTAT+CGG + tig0024731:26736-26755 Msa1419850:intron 15.0%
!!! AATTAATTTTCTATTAAGGA+AGG + tig0024731:26908-26927 Msa1419850:intron 15.0%
!!! TTCAATTTTGAAATTCATTA+CGG - tig0024731:27258-27277 None:intergenic 15.0%
!! AATGAATTTCAAAATTGAAT+TGG + tig0024731:27259-27278 Msa1419850:intron 15.0%
!! AAATAATAATCTTGTGATAA+CGG - tig0024731:27476-27495 None:intergenic 15.0%
!!! CTTTTATGTTTTATAAATGT+AGG + tig0024731:28107-28126 Msa1419850:intron 15.0%
!!! TTAATTTAATTTATATCAGG+TGG + tig0024731:28562-28581 Msa1419850:intron 15.0%
!! GTAAGCTAAAAAAAAAAGTA+GGG + tig0024731:17700-17719 Msa1419850:five_prime_UTR 20.0%
!! ATTGAAAAGAAAAATTACCT+GGG - tig0024731:17936-17955 None:intergenic 20.0%
!! AATTGAAAAGAAAAATTACC+TGG - tig0024731:17937-17956 None:intergenic 20.0%
!! AAAAGAACAATTTAGTAACA+CGG - tig0024731:18589-18608 None:intergenic 20.0%
!! CAAGTAACAATAATCATTAA+TGG - tig0024731:18785-18804 None:intergenic 20.0%
!!! GAGTTTATTTTTTCTATATC+AGG + tig0024731:18959-18978 Msa1419850:intron 20.0%
!!! ATATCAGGTTTATGAAATTT+TGG + tig0024731:18974-18993 Msa1419850:intron 20.0%
!! AAATAAACTACTTTACCTTT+GGG - tig0024731:20425-20444 None:intergenic 20.0%
!! AAAATAAACTACTTTACCTT+TGG - tig0024731:20426-20445 None:intergenic 20.0%
!! TTGATAAATTATACACAATG+AGG - tig0024731:20506-20525 None:intergenic 20.0%
!! TCATTGTGTATAATTTATCA+AGG + tig0024731:20505-20524 Msa1419850:intron 20.0%
!!! TTGAAAAAGGTGATTTTTAT+GGG - tig0024731:20744-20763 None:intergenic 20.0%
!!! TTTGAAAAAGGTGATTTTTA+TGG - tig0024731:20745-20764 None:intergenic 20.0%
!! TATGATGTTTAAAAAAAGAG+TGG + tig0024731:22552-22571 Msa1419850:intron 20.0%
!!! GTGTTCATTTTAGATTTTAA+AGG + tig0024731:22605-22624 Msa1419850:intron 20.0%
!!! GTTTGTAATTTGTTAACATT+TGG + tig0024731:23010-23029 Msa1419850:intron 20.0%
!! TAATCAATGATGATAAAATC+AGG - tig0024731:23400-23419 None:intergenic 20.0%
!! ATACTTGATGAAAATAATTC+AGG - tig0024731:23674-23693 None:intergenic 20.0%
!!! GAATTATTTTCATCAAGTAT+CGG + tig0024731:23674-23693 Msa1419850:intron 20.0%
!! GTAAATATAAAAGTTCCAAA+TGG + tig0024731:23798-23817 Msa1419850:intron 20.0%
!! ATTGTACAAATGTTTGTAAT+AGG + tig0024731:23829-23848 Msa1419850:intron 20.0%
!! TTGTACAAATGTTTGTAATA+GGG + tig0024731:23830-23849 Msa1419850:intron 20.0%
!! ATGAAAAGAATAACACATAT+CGG - tig0024731:23881-23900 None:intergenic 20.0%
!! AAAGAAATCAAAAGTTATCA+AGG + tig0024731:24035-24054 Msa1419850:CDS 20.0%
!!! AATCTTTTACTTCTCAAATT+CGG - tig0024731:24357-24376 None:intergenic 20.0%
!! AATTTGAGAAGTAAAAGATT+TGG + tig0024731:24357-24376 Msa1419850:intron 20.0%
!! CTAAATAGATATCAAGTTAT+TGG + tig0024731:24570-24589 Msa1419850:intron 20.0%
!!! TTTTTGAAATTTGTCTCATT+AGG + tig0024731:25250-25269 Msa1419850:intron 20.0%
!! TATAAAAATTTCTGCAAAGT+GGG - tig0024731:25886-25905 None:intergenic 20.0%
!!! TTCTAAAAGATTAAACTGTT+TGG + tig0024731:26213-26232 Msa1419850:intron 20.0%
!!! AACTTTTTTATTAGACGAAA+TGG + tig0024731:26308-26327 Msa1419850:intron 20.0%
!!! ACTTTTTTATTAGACGAAAT+GGG + tig0024731:26309-26328 Msa1419850:intron 20.0%
!!! CAGGAAATTTAAAATTATTG+TGG + tig0024731:26528-26547 Msa1419850:intron 20.0%
!! AACACACAAATTTGTATTTA+TGG - tig0024731:26716-26735 None:intergenic 20.0%
!! TTTCAAAATTGAATTGGAAA+AGG + tig0024731:27265-27284 Msa1419850:intron 20.0%
!!! CTTTTGATTTATTATTCTCA+AGG - tig0024731:27631-27650 None:intergenic 20.0%
!! CTTGAGAATAATAAATCAAA+AGG + tig0024731:27629-27648 Msa1419850:intron 20.0%
!! AAAAACAATTATTCAGCATT+GGG - tig0024731:28033-28052 None:intergenic 20.0%
!!! ATACACATTTTCAAACAAAT+AGG - tig0024731:28062-28081 None:intergenic 20.0%
!! TTGTTTGAAAATGTGTATAT+CGG + tig0024731:28064-28083 Msa1419850:intron 20.0%
!! TAAGTTATTGAAAGTTATTC+AGG - tig0024731:29054-29073 None:intergenic 20.0%
!!! AAGCTGGGAATTTTTTATAA+GGG - tig0024731:17987-18006 None:intergenic 25.0%
!!! AAAGCTGGGAATTTTTTATA+AGG - tig0024731:17988-18007 None:intergenic 25.0%
!!! TGTTGATGATAGAAAGAAAA+AGG + tig0024731:18073-18092 Msa1419850:intron 25.0%
!!! GTTGATGATAGAAAGAAAAA+GGG + tig0024731:18074-18093 Msa1419850:intron 25.0%
!! TTGATGATAGAAAGAAAAAG+GGG + tig0024731:18075-18094 Msa1419850:intron 25.0%
! ATTACATGTATGTGTAAAAC+CGG - tig0024731:18364-18383 None:intergenic 25.0%
! AGTTATATGTTTATACGGTA+AGG + tig0024731:18536-18555 Msa1419850:intron 25.0%
! TGTATAGATTCTAGACAATT+TGG + tig0024731:18637-18656 Msa1419850:intron 25.0%
! TCGAGTTTCATATAATTCAT+AGG + tig0024731:18726-18745 Msa1419850:intron 25.0%
!! ATGATTATTGTTACTTGTGT+AGG + tig0024731:18788-18807 Msa1419850:intron 25.0%
! ATGTAAAACAACATCAATCT+TGG - tig0024731:19036-19055 None:intergenic 25.0%
! ATCAAAATGACATTACATCA+AGG - tig0024731:19199-19218 None:intergenic 25.0%
! ATATTTAACTCAATGAAACC+AGG - tig0024731:19291-19310 None:intergenic 25.0%
!! TATGACGTTTGACATATTTT+TGG + tig0024731:19308-19327 Msa1419850:intron 25.0%
! AACCTATTGTTAAGGAAATT+TGG + tig0024731:19440-19459 Msa1419850:intron 25.0%
! GTTATCATCTAAACATATGA+TGG - tig0024731:19975-19994 None:intergenic 25.0%
!!! TATATTTTGTTTTCAGTCAG+AGG + tig0024731:20013-20032 Msa1419850:intron 25.0%
! TGTCAAGTAGAGAAAAAAAT+GGG - tig0024731:20327-20346 None:intergenic 25.0%
! ATGTCAAGTAGAGAAAAAAA+TGG - tig0024731:20328-20347 None:intergenic 25.0%
!! TTATCAAGGTATTTCATTCA+TGG + tig0024731:20519-20538 Msa1419850:intron 25.0%
!! TATCAAGGTATTTCATTCAT+GGG + tig0024731:20520-20539 Msa1419850:intron 25.0%
!!! TCTAAAAGAGTGTTTATTAC+TGG + tig0024731:21171-21190 Msa1419850:intron 25.0%
! ACGATGGTAATTAAGAAATT+CGG - tig0024731:21290-21309 None:intergenic 25.0%
! TTTGGACTTTGAATAACAAT+AGG + tig0024731:21576-21595 Msa1419850:intron 25.0%
! TTGGACTTTGAATAACAATA+GGG + tig0024731:21577-21596 Msa1419850:intron 25.0%
! CATAGAAATACTCATTAGAT+TGG - tig0024731:21806-21825 None:intergenic 25.0%
! ATATGTGCAATTTCTTAACA+CGG + tig0024731:21842-21861 Msa1419850:CDS 25.0%
! TAACATTATATGCAGTATGA+TGG - tig0024731:22098-22117 None:intergenic 25.0%
!!! TTTTAATTAAGGTGTTGTTG+TGG + tig0024731:22192-22211 Msa1419850:intron 25.0%
! ACTCATAAAATAAACAAGCT+GGG - tig0024731:22244-22263 None:intergenic 25.0%
! CTAAAATGAACACTATATGT+TGG - tig0024731:22598-22617 None:intergenic 25.0%
! TAAAAAAATGCTAAGTAGTG+AGG + tig0024731:22671-22690 Msa1419850:intron 25.0%
! AAAAAAATGCTAAGTAGTGA+GGG + tig0024731:22672-22691 Msa1419850:intron 25.0%
! ATAGAAATAAAATGATTGCG+TGG + tig0024731:22926-22945 Msa1419850:intron 25.0%
!!! TGGTTAAAGTTTTTAGGAAT+AGG + tig0024731:22946-22965 Msa1419850:intron 25.0%
! GATATCATCAACTAAAAAGT+GGG - tig0024731:23099-23118 None:intergenic 25.0%
! TAAACTCAATCTTTGTCTTT+AGG + tig0024731:23151-23170 Msa1419850:intron 25.0%
!! GATAGTCAAATTTGCTTTAA+AGG - tig0024731:23508-23527 None:intergenic 25.0%
! AGTTTCAGAAAAGAAATAGA+TGG + tig0024731:23573-23592 Msa1419850:CDS 25.0%
! TGATGAATTGATTATGACTA+AGG + tig0024731:23737-23756 Msa1419850:intron 25.0%
! AATAACACATATCGGTAAAA+AGG - tig0024731:23873-23892 None:intergenic 25.0%
!! CTTTTCATTTCTTCTTTACT+AGG + tig0024731:23893-23912 Msa1419850:intron 25.0%
!! AAAGTATCAAAGTAAAAACC+AGG - tig0024731:24136-24155 None:intergenic 25.0%
! TATGGAAACATGTAAAATGA+AGG + tig0024731:24309-24328 Msa1419850:intron 25.0%
! AATAGAAGAGAAACATGTTT+AGG - tig0024731:24411-24430 None:intergenic 25.0%
!!! TATTACACAATTTTGGTCTT+TGG + tig0024731:24538-24557 Msa1419850:intron 25.0%
! ATAGATATCAAGTTATTGGA+AGG + tig0024731:24574-24593 Msa1419850:intron 25.0%
! TAAAACACAATAGTCAGAAA+TGG + tig0024731:24719-24738 Msa1419850:intron 25.0%
!!! AAGGTACTTCTTTATTTTAC+TGG + tig0024731:24878-24897 Msa1419850:intron 25.0%
! CTTTATGCAACAAAGAAATT+AGG - tig0024731:24983-25002 None:intergenic 25.0%
! TATACTAAAGAGATGACATT+AGG - tig0024731:25577-25596 None:intergenic 25.0%
! AGACAGAGAATAACAATAAA+AGG - tig0024731:25755-25774 None:intergenic 25.0%
! AAAGTCAAAAGATTAACTCA+AGG - tig0024731:25816-25835 None:intergenic 25.0%
! ATAAAAATTTCTGCAAAGTG+GGG - tig0024731:25885-25904 None:intergenic 25.0%
! CTATAAAAATTTCTGCAAAG+TGG - tig0024731:25887-25906 None:intergenic 25.0%
!! GCAGAAATTTTTATAGTTGA+AGG + tig0024731:25891-25910 Msa1419850:intron 25.0%
! AAAAAGTTAATTTCAGCACA+AGG - tig0024731:26296-26315 None:intergenic 25.0%
!!! CTTTTTTATTAGACGAAATG+GGG + tig0024731:26310-26329 Msa1419850:intron 25.0%
!!! TTTTTTATTAGACGAAATGG+GGG + tig0024731:26311-26330 Msa1419850:intron 25.0%
! AGACTTTGATATCATATCAA+TGG + tig0024731:26375-26394 Msa1419850:intron 25.0%
! TTGTAAGACAATTTGAACAA+AGG + tig0024731:26491-26510 Msa1419850:intron 25.0%
! AAGGAGTCTCAAAAATTTAA+AGG - tig0024731:27110-27129 None:intergenic 25.0%
!!! AAATTTTTGAGACTCCTTAA+TGG + tig0024731:27112-27131 Msa1419850:intron 25.0%
!! AAAATGTGTTCTTTTTGTTC+AGG + tig0024731:27425-27444 Msa1419850:intron 25.0%
!! AAATGTGTTCTTTTTGTTCA+GGG + tig0024731:27426-27445 Msa1419850:intron 25.0%
!! GACATTTTTCTATAGATATC+AGG + tig0024731:27542-27561 Msa1419850:CDS 25.0%
!! AAAGGATTAAATTGATTCAG+TGG + tig0024731:27647-27666 Msa1419850:intron 25.0%
!! TTACAAGGTGTTTATTAGAT+TGG + tig0024731:27755-27774 Msa1419850:intron 25.0%
! GAAAAACAATTATTCAGCAT+TGG - tig0024731:28034-28053 None:intergenic 25.0%
! ACAAAATTCACACAATATGA+CGG - tig0024731:28279-28298 None:intergenic 25.0%
! ACTTATTTAAACACACACTT+AGG + tig0024731:28358-28377 Msa1419850:intron 25.0%
! TAACTTTCAATAACTTAGCA+AGG + tig0024731:29057-29076 Msa1419850:three_prime_UTR 25.0%
! AACTTTCAATAACTTAGCAA+GGG + tig0024731:29058-29077 Msa1419850:three_prime_UTR 25.0%
AAACAAAGAAGAAGATAGAG+AGG + tig0024731:17737-17756 Msa1419850:five_prime_UTR 30.0%
AACAAAGAAGAAGATAGAGA+GGG + tig0024731:17738-17757 Msa1419850:five_prime_UTR 30.0%
TGTTTGTGAAGTGAATACAA+TGG + tig0024731:17791-17810 Msa1419850:exon 30.0%
! AATTCCCAGCTTTTTGTTAA+TGG + tig0024731:17995-18014 Msa1419850:intron 30.0%
! ATTCCCAGCTTTTTGTTAAT+GGG + tig0024731:17996-18015 Msa1419850:intron 30.0%
AAAGAAGACATATAAGCTCT+TGG - tig0024731:18215-18234 None:intergenic 30.0%
AGCTGAAGATATTCATAAGA+AGG + tig0024731:18241-18260 Msa1419850:CDS 30.0%
!! TTATGGTTCTGATCAAATTC+AGG + tig0024731:18277-18296 Msa1419850:CDS 30.0%
!! AGTTTTATGATAGCGTAAAC+CGG + tig0024731:18342-18361 Msa1419850:intron 30.0%
ATATAACTCAGGGATATCAT+AGG - tig0024731:18524-18543 None:intergenic 30.0%
CCGTATAAACATATAACTCA+GGG - tig0024731:18534-18553 None:intergenic 30.0%
CCCTGAGTTATATGTTTATA+CGG + tig0024731:18531-18550 Msa1419850:intron 30.0%
ACCGTATAAACATATAACTC+AGG - tig0024731:18535-18554 None:intergenic 30.0%
ATAGATTCTAGACAATTTGG+TGG + tig0024731:18640-18659 Msa1419850:intron 30.0%
! GAACTTGTTTGACTGTAAAT+TGG + tig0024731:18662-18681 Msa1419850:intron 30.0%
CTGTAAATTGGATATTGACA+CGG + tig0024731:18674-18693 Msa1419850:intron 30.0%
TGTTAGAGTTAATAGATTGC+TGG + tig0024731:18754-18773 Msa1419850:intron 30.0%
!! TTTTTGTTTGCAGTCATTGA+AGG + tig0024731:18935-18954 Msa1419850:intron 30.0%
TTGTTGTCTGATGTTTCTTA+TGG + tig0024731:19102-19121 Msa1419850:intron 30.0%
TGTTGTCTGATGTTTCTTAT+GGG + tig0024731:19103-19122 Msa1419850:intron 30.0%
!!! ATTTTTGGCAATCCTAACAA+TGG + tig0024731:19323-19342 Msa1419850:intron 30.0%
CCATAAAAAGAACCATTGTT+AGG - tig0024731:19338-19357 None:intergenic 30.0%
! CCTAACAATGGTTCTTTTTA+TGG + tig0024731:19335-19354 Msa1419850:intron 30.0%
AAGCTGAAAACCTATTGTTA+AGG + tig0024731:19432-19451 Msa1419850:intron 30.0%
AGCCAAATTTCCTTAACAAT+AGG - tig0024731:19445-19464 None:intergenic 30.0%
AAAGCAGATTTCTTTGTAGT+TGG - tig0024731:19585-19604 None:intergenic 30.0%
!! AGAGGATTGTTGTATTTTGA+AGG + tig0024731:19652-19671 Msa1419850:intron 30.0%
!! TGTATTTTGAAGGTTTCAGA+AGG + tig0024731:19662-19681 Msa1419850:intron 30.0%
AGACAAAAAGAGAATTGGTA+AGG - tig0024731:19845-19864 None:intergenic 30.0%
GTTCAAGACAAAAAGAGAAT+TGG - tig0024731:19850-19869 None:intergenic 30.0%
CAAGATATCTTAAATGTGAG+CGG - tig0024731:19933-19952 None:intergenic 30.0%
! ATTTAAGATATCTTGGCACT+TGG + tig0024731:19938-19957 Msa1419850:intron 30.0%
ATACATAACTAACCAGAACA+AGG - tig0024731:20046-20065 None:intergenic 30.0%
AAAATTTGATACGTGTTCCT+TGG - tig0024731:20219-20238 None:intergenic 30.0%
! AAGGAACACGTATCAAATTT+TGG + tig0024731:20218-20237 Msa1419850:CDS 30.0%
CAACAGAAAAACCATAAACT+AGG - tig0024731:20276-20295 None:intergenic 30.0%
GTTGTACTCAAATTCAATAG+CGG - tig0024731:20364-20383 None:intergenic 30.0%
! AATTTCCTTTGTTGTCTAGA+AGG + tig0024731:20578-20597 Msa1419850:intron 30.0%
! CTCTAGAGAAAAAAAAACTC+TGG - tig0024731:20681-20700 None:intergenic 30.0%
!!! GTCGTTTGTTTTGGATTTTT+TGG - tig0024731:21055-21074 None:intergenic 30.0%
!! TTGAGCTTTTTGGAGATTAA+GGG + tig0024731:21107-21126 Msa1419850:intron 30.0%
TATATATCAGTGCCATCATT+TGG + tig0024731:21245-21264 Msa1419850:intron 30.0%
! TTTTTCTGTGCCTTGAAATT+TGG + tig0024731:21387-21406 Msa1419850:intron 30.0%
AGATGCCTTTAATTGATTAG+AGG + tig0024731:21546-21565 Msa1419850:intron 30.0%
GAACTCCTCTAATCAATTAA+AGG - tig0024731:21554-21573 None:intergenic 30.0%
!! TTGGCTTGATTTGATCTTTT+TGG + tig0024731:21616-21635 Msa1419850:intron 30.0%
GTTTATAGGACAAAATGCTA+TGG - tig0024731:21672-21691 None:intergenic 30.0%
! AGCATTTTGTCCTATAAACA+TGG + tig0024731:21673-21692 Msa1419850:intron 30.0%
! TCTAATGAGTATTTCTATGC+TGG + tig0024731:21807-21826 Msa1419850:CDS 30.0%
! CTAATGAGTATTTCTATGCT+GGG + tig0024731:21808-21827 Msa1419850:CDS 30.0%
! TAATGAGTATTTCTATGCTG+GGG + tig0024731:21809-21828 Msa1419850:CDS 30.0%
CAACAACTGGAATAAGAAAA+AGG - tig0024731:21922-21941 None:intergenic 30.0%
! CTTTTTCTTATTCCAGTTGT+TGG + tig0024731:21920-21939 Msa1419850:intron 30.0%
CACTCATAAAATAAACAAGC+TGG - tig0024731:22245-22264 None:intergenic 30.0%
!!! CAGCTTGTTTATTTTATGAG+TGG + tig0024731:22243-22262 Msa1419850:intron 30.0%
!!! GTTTATTTTATGAGTGGACT+AGG + tig0024731:22249-22268 Msa1419850:intron 30.0%
AGAATTGGAAAAACAGATGA+GGG - tig0024731:22360-22379 None:intergenic 30.0%
AAGAATTGGAAAAACAGATG+AGG - tig0024731:22361-22380 None:intergenic 30.0%
!! CATCTGTTTTTCCAATTCTT+TGG + tig0024731:22361-22380 Msa1419850:intron 30.0%
!! TTTTTCCAATTCTTTGGCTT+TGG + tig0024731:22367-22386 Msa1419850:intron 30.0%
!! ATGAAACATAGTTTGCTCAA+AGG + tig0024731:22630-22649 Msa1419850:intron 30.0%
AAAAAATGCTAAGTAGTGAG+GGG + tig0024731:22673-22692 Msa1419850:intron 30.0%
! ATTGCGTGGTTAAAGTTTTT+AGG + tig0024731:22940-22959 Msa1419850:intron 30.0%
AAAACGATAAAAGTGGTTTC+AGG + tig0024731:22988-23007 Msa1419850:intron 30.0%
GGATATCATCAACTAAAAAG+TGG - tig0024731:23100-23119 None:intergenic 30.0%
CATTTGATTATCCTGCATAT+GGG - tig0024731:23192-23211 None:intergenic 30.0%
ATATTTCACTGTTAGTTGTG+TGG + tig0024731:23220-23239 Msa1419850:intron 30.0%
TATTTCACTGTTAGTTGTGT+GGG + tig0024731:23221-23240 Msa1419850:intron 30.0%
TGTGTAATTGATGTTCTCTA+TGG + tig0024731:23345-23364 Msa1419850:intron 30.0%
TACTTGTAGTCATTCTTAGA+AGG - tig0024731:23371-23390 None:intergenic 30.0%
GTCATAATCAATTCATCACA+AGG - tig0024731:23735-23754 None:intergenic 30.0%
AAAAGTTCCAAATGGACAAT+CGG + tig0024731:23806-23825 Msa1419850:intron 30.0%
AGCATATCCTAGTATTGTAT+CGG - tig0024731:23935-23954 None:intergenic 30.0%
ACAAGAACACTAAATAGTCT+CGG + tig0024731:24012-24031 Msa1419850:CDS 30.0%
!!! AGGAGTCTTCTATTTTAGTA+GGG - tig0024731:24116-24135 None:intergenic 30.0%
CTACATAATTTCCTGTTATG+TGG + tig0024731:24190-24209 Msa1419850:intron 30.0%
AAGAACAATTGGAATTGCTA+AGG - tig0024731:24468-24487 None:intergenic 30.0%
CAATTCCAATTGTTCTTCTA+CGG + tig0024731:24471-24490 Msa1419850:intron 30.0%
ATCAAGTTATTGGAAGGTTT+AGG + tig0024731:24580-24599 Msa1419850:intron 30.0%
TGGCATTTATTCTACGTTAA+TGG - tig0024731:24623-24642 None:intergenic 30.0%
GAAAAGGATATTACTCTAAG+TGG + tig0024731:24782-24801 Msa1419850:CDS 30.0%
AGAATATCTTACCGAGTATT+TGG + tig0024731:25053-25072 Msa1419850:CDS 30.0%
AAAGAGATGACATTAGGATT+TGG - tig0024731:25571-25590 None:intergenic 30.0%
GAATTTCAAAACATGGTTGT+TGG - tig0024731:26116-26135 None:intergenic 30.0%
! TTTTATTAGAAGAATAGGGG+CGG + tig0024731:26140-26159 Msa1419850:intron 30.0%
!!! AGAAATTTTGGCTCATAACT+TGG - tig0024731:26197-26216 None:intergenic 30.0%
CTAAATGTAAAACAACACTC+AGG - tig0024731:26247-26266 None:intergenic 30.0%
ACCTAGAAGTTTAAACTCTT+CGG + tig0024731:26405-26424 Msa1419850:intron 30.0%
! GAAGTTTTCACATATGGTTT+TGG + tig0024731:26553-26572 Msa1419850:intron 30.0%
! ATTATTTGTTAACTGACCTG+TGG + tig0024731:26652-26671 Msa1419850:intron 30.0%
GTAAGATTCTGAACATTGAA+AGG + tig0024731:26794-26813 Msa1419850:CDS 30.0%
GAGATCCAAAATTTAATCCT+TGG + tig0024731:26847-26866 Msa1419850:CDS 30.0%
! CAAGACCAAGGATTAAATTT+TGG - tig0024731:26855-26874 None:intergenic 30.0%
CAAAATTTAATCCTTGGTCT+TGG + tig0024731:26853-26872 Msa1419850:CDS 30.0%
TCATGTATGCAAGTATGTAA+TGG - tig0024731:27003-27022 None:intergenic 30.0%
TTACATACTTGCATACATGA+AGG + tig0024731:27003-27022 Msa1419850:intron 30.0%
! TCACTAGCAATTAGTTTCTT+CGG - tig0024731:27081-27100 None:intergenic 30.0%
ACAATTGATGCAAACATTGA+AGG + tig0024731:27157-27176 Msa1419850:intron 30.0%
AGATATCAGGTAAAGTATAC+AGG + tig0024731:27555-27574 Msa1419850:intron 30.0%
!! TTGTTTTTCTTCTTCCATGA+AGG - tig0024731:27601-27620 None:intergenic 30.0%
! GGTTGTTTGTTTGTTTCTTA+TGG + tig0024731:27944-27963 Msa1419850:intron 30.0%
! ATGTTTTATAAATGTAGGGC+TGG + tig0024731:28112-28131 Msa1419850:intron 30.0%
! TGTTTTATAAATGTAGGGCT+GGG + tig0024731:28113-28132 Msa1419850:intron 30.0%
GGAAAACACAATATTTGCTT+CGG - tig0024731:28222-28241 None:intergenic 30.0%
! CAACTTTTGTAATACCAACT+AGG - tig0024731:28397-28416 None:intergenic 30.0%
ACATTATCTAAGAATCTACG+CGG - tig0024731:28477-28496 None:intergenic 30.0%
ATTTATATCAGGTGGATGTT+CGG + tig0024731:28570-28589 Msa1419850:intron 30.0%
!! GATTTGAATGGATTATTCAC+TGG + tig0024731:28807-28826 Msa1419850:three_prime_UTR 30.0%
ACTTTCAATAACTTAGCAAG+GGG + tig0024731:29059-29078 Msa1419850:three_prime_UTR 30.0%
GAGATGAAGAAGAATGAAGA+CGG - tig0024731:17890-17909 None:intergenic 35.0%
TGACCCATTAACAAAAAGCT+GGG - tig0024731:18002-18021 None:intergenic 35.0%
TTGACCCATTAACAAAAAGC+TGG - tig0024731:18003-18022 None:intergenic 35.0%
!!! TTTGGTTTTTGTTTTGTCCG+AGG + tig0024731:18049-18068 Msa1419850:intron 35.0%
CTTTCTATCATCAACAACCT+CGG - tig0024731:18069-18088 None:intergenic 35.0%
! GAAATTTTCTGTCCCTAGTT+TGG + tig0024731:18172-18191 Msa1419850:CDS 35.0%
!! AAGGACAGTTCTAAAGCTTA+TGG + tig0024731:18260-18279 Msa1419850:CDS 35.0%
ATGTTTATACGGTAAGGCAA+TGG + tig0024731:18542-18561 Msa1419850:intron 35.0%
TTACTTGTGTAGGTACTTGA+AGG + tig0024731:18798-18817 Msa1419850:intron 35.0%
AGTTCAAATCTAGATTGCAG+AGG - tig0024731:19234-19253 None:intergenic 35.0%
TTAACTCAATGAAACCAGGT+GGG - tig0024731:19287-19306 None:intergenic 35.0%
TTTAACTCAATGAAACCAGG+TGG - tig0024731:19288-19307 None:intergenic 35.0%
! ATGCCACATTTACCATCTTT+TGG + tig0024731:19498-19517 Msa1419850:intron 35.0%
CAACCAAAAGATGGTAAATG+TGG - tig0024731:19504-19523 None:intergenic 35.0%
AGTCGAAATCAACCAAAAGA+TGG - tig0024731:19513-19532 None:intergenic 35.0%
ATACAACAATCCTCTAGACT+CGG - tig0024731:19647-19666 None:intergenic 35.0%
TTCAGAAGGTTAATACTCAC+TGG + tig0024731:19676-19695 Msa1419850:intron 35.0%
! CGCTCACATTTAAGATATCT+TGG + tig0024731:19931-19950 Msa1419850:intron 35.0%
TACACACAAACATATTCTCG+TGG + tig0024731:20139-20158 Msa1419850:CDS 35.0%
ACACACAAACATATTCTCGT+GGG + tig0024731:20140-20159 Msa1419850:CDS 35.0%
!!! TGGCGATCTTTATTTTCGAA+AGG - tig0024731:20199-20218 None:intergenic 35.0%
TTCGAAAATAAAGATCGCCA+AGG + tig0024731:20199-20218 Msa1419850:CDS 35.0%
!! AAATTTTGGCCTGACAAAGA+AGG + tig0024731:20232-20251 Msa1419850:CDS 35.0%
GGTCATTCTTTCCTAGTTTA+TGG + tig0024731:20262-20281 Msa1419850:intron 35.0%
TTTGAGTACAACACAATAGC+TGG + tig0024731:20372-20391 Msa1419850:CDS 35.0%
! ACTACTTTACCTTTGGGTTA+AGG - tig0024731:20419-20438 None:intergenic 35.0%
!! TTCACTTTTCTCATCAGCAA+TGG + tig0024731:20479-20498 Msa1419850:intron 35.0%
!!! TGGGTTTTAGTTACTTTGAG+TGG + tig0024731:20539-20558 Msa1419850:intron 35.0%
TTGATCCTTCTAGACAACAA+AGG - tig0024731:20586-20605 None:intergenic 35.0%
! ACTTAGTAGCTTGAGCTTTT+TGG + tig0024731:21097-21116 Msa1419850:intron 35.0%
!! CTTGAGCTTTTTGGAGATTA+AGG + tig0024731:21106-21125 Msa1419850:intron 35.0%
! AAGGGATGATGTTGTTCTTT+TGG + tig0024731:21125-21144 Msa1419850:intron 35.0%
!!! TTGTTCTTTTGGAGTGTAGT+AGG + tig0024731:21136-21155 Msa1419850:intron 35.0%
!!! TGTTCTTTTGGAGTGTAGTA+GGG + tig0024731:21137-21156 Msa1419850:intron 35.0%
!! TCTGAAGGTATTCCAAATGA+TGG - tig0024731:21260-21279 None:intergenic 35.0%
TTGAGGAAAAATTCTGACGA+TGG - tig0024731:21306-21325 None:intergenic 35.0%
!! AAGATGGTGACTTTGATTTG+AGG - tig0024731:21323-21342 None:intergenic 35.0%
CACAGAAAAACAATCAGCAA+TGG - tig0024731:21377-21396 None:intergenic 35.0%
AGCCTGTTTCATCTATTAGA+GGG - tig0024731:21416-21435 None:intergenic 35.0%
TAGCCTGTTTCATCTATTAG+AGG - tig0024731:21417-21436 None:intergenic 35.0%
CGTATTTCATCTAATTGACC+AGG - tig0024731:21479-21498 None:intergenic 35.0%
TTGATTAGAGGAGTTCACTT+TGG + tig0024731:21558-21577 Msa1419850:intron 35.0%
GGGTGCATAATAATGCATAT+TGG + tig0024731:21597-21616 Msa1419850:intron 35.0%
! GAGAGCAACTTTTATCTACT+TGG + tig0024731:21704-21723 Msa1419850:intron 35.0%
! TCATTAGATTGGACCTTTTC+TGG - tig0024731:21795-21814 None:intergenic 35.0%
! AATGAGTATTTCTATGCTGG+GGG + tig0024731:21810-21829 Msa1419850:CDS 35.0%
GCAATTTCTTAACACGGATA+AGG + tig0024731:21848-21867 Msa1419850:CDS 35.0%
TTCATGCACTACAAGCATAA+AGG - tig0024731:21889-21908 None:intergenic 35.0%
!!! CTGGGAGTTTTTTGTACTTT+TGG + tig0024731:22403-22422 Msa1419850:intron 35.0%
!! TTTTGGTTGTATTGTGACGT+TGG + tig0024731:22420-22439 Msa1419850:intron 35.0%
!! GGTGTTGTGTTTTCCAATTT+TGG + tig0024731:22441-22460 Msa1419850:intron 35.0%
!! TGTGTTTTCCAATTTTGGTG+TGG + tig0024731:22446-22465 Msa1419850:intron 35.0%
AAAACGATGCCGTAAATATG+CGG - tig0024731:22476-22495 None:intergenic 35.0%
AGAGTGGTATTTGCATTTCT+AGG + tig0024731:22568-22587 Msa1419850:intron 35.0%
!! TAGTTTGCTCAAAGGAAGAA+AGG + tig0024731:22638-22657 Msa1419850:intron 35.0%
TTATCAGTTATGACCATGCA+GGG - tig0024731:22866-22885 None:intergenic 35.0%
ACAGTCGAAAACGATAAAAG+TGG + tig0024731:22981-23000 Msa1419850:intron 35.0%
TTAAAGAAAGTGAGAGAGAG+TGG - tig0024731:23134-23153 None:intergenic 35.0%
CCATTTGATTATCCTGCATA+TGG - tig0024731:23193-23212 None:intergenic 35.0%
CCATATGCAGGATAATCAAA+TGG + tig0024731:23190-23209 Msa1419850:intron 35.0%
TGCCTGAGCATTTATAAATC+TGG + tig0024731:23265-23284 Msa1419850:intron 35.0%
AGCCAGATTTATAAATGCTC+AGG - tig0024731:23270-23289 None:intergenic 35.0%
! CAGTTGATATAGCTTTGCAA+TGG + tig0024731:23601-23620 Msa1419850:CDS 35.0%
AGCTTTCATACCATCGATAT+GGG - tig0024731:23986-24005 None:intergenic 35.0%
AAGCTTTCATACCATCGATA+TGG - tig0024731:23987-24006 None:intergenic 35.0%
!!! CTTCTATTTTAGTAGGGGAA+AGG - tig0024731:24110-24129 None:intergenic 35.0%
!!! GGAGTCTTCTATTTTAGTAG+GGG - tig0024731:24115-24134 None:intergenic 35.0%
!!! CAGGAGTCTTCTATTTTAGT+AGG - tig0024731:24117-24136 None:intergenic 35.0%
CTACTAAAATAGAAGACTCC+TGG + tig0024731:24115-24134 Msa1419850:intron 35.0%
AGGAAATTATGTAGTTGCAG+TGG - tig0024731:24184-24203 None:intergenic 35.0%
TACAACTTGCATGTATCCAA+GGG + tig0024731:24238-24257 Msa1419850:intron 35.0%
TACTTCCCTATCATCAATCT+AGG - tig0024731:24385-24404 None:intergenic 35.0%
CTTCTATTCTTTCATCAAGC+AGG + tig0024731:24423-24442 Msa1419850:intron 35.0%
GGAATTGCTAAGGAACTAAA+AGG - tig0024731:24458-24477 None:intergenic 35.0%
TGCCAAGTCTGTCTTAATAA+AGG + tig0024731:24638-24657 Msa1419850:intron 35.0%
GTCCTTTATTAAGACAGACT+TGG - tig0024731:24643-24662 None:intergenic 35.0%
AAAGGACAAAATGATACTGC+AGG + tig0024731:24656-24675 Msa1419850:intron 35.0%
GTCTATCATCTGTTCTTTAC+AGG + tig0024731:24760-24779 Msa1419850:intron 35.0%
CATCTGTTCTTTACAGGAAA+AGG + tig0024731:24766-24785 Msa1419850:intron 35.0%
TTTGTTTGTCCTTCAAACTC+TGG - tig0024731:24860-24879 None:intergenic 35.0%
AGAGTTTGAAGGACAAACAA+AGG + tig0024731:24859-24878 Msa1419850:CDS 35.0%
TGAAGTGCAGGAAAAGAAAT+TGG - tig0024731:24954-24973 None:intergenic 35.0%
ATTAGGATGATATGAAGTGC+AGG - tig0024731:24966-24985 None:intergenic 35.0%
TTCTTTGTTGCATAAAGACG+AGG + tig0024731:24986-25005 Msa1419850:intron 35.0%
!! TAAAGCTCTGAATGCTTTCA+AGG + tig0024731:25110-25129 Msa1419850:CDS 35.0%
! TGTGGTATATCTCTGTTTTG+TGG + tig0024731:25383-25402 Msa1419850:intron 35.0%
TTTGATCATACAAGGCTACT+GGG - tig0024731:25505-25524 None:intergenic 35.0%
AGCAAACCTTTGATCATACA+AGG - tig0024731:25513-25532 None:intergenic 35.0%
CTCTTTAGTATAGCTTTCCT+CGG + tig0024731:25585-25604 Msa1419850:intron 35.0%
TTTGACATGAATACCTATGC+TGG - tig0024731:25719-25738 None:intergenic 35.0%
GTTCATGCCAAATTAGTTGA+GGG + tig0024731:25788-25807 Msa1419850:intron 35.0%
! CTGATAATGTGTACTTTACC+TGG - tig0024731:25962-25981 None:intergenic 35.0%
CAGGTAAAGTACACATTATC+AGG + tig0024731:25960-25979 Msa1419850:intron 35.0%
! TTCGATTGGTGACAATGATT+AGG + tig0024731:26089-26108 Msa1419850:intron 35.0%
TTTCAGCACAAGGTATAGTA+AGG - tig0024731:26286-26305 None:intergenic 35.0%
TTGACAAGTGGTTACTAGTT+AGG - tig0024731:26353-26372 None:intergenic 35.0%
TCCGAAGAGTTTAAACTTCT+AGG - tig0024731:26409-26428 None:intergenic 35.0%
TGGGCTAATAAGAGTTAAGT+AGG - tig0024731:26446-26465 None:intergenic 35.0%
TTAGCCCATTAACAGAACAA+AGG + tig0024731:26458-26477 Msa1419850:intron 35.0%
!! GAGCAGTTAATTTGTCAGAT+TGG + tig0024731:26674-26693 Msa1419850:intron 35.0%
AGATTCTGAACATTGAAAGG+AGG + tig0024731:26797-26816 Msa1419850:CDS 35.0%
GATTCTGAACATTGAAAGGA+GGG + tig0024731:26798-26817 Msa1419850:CDS 35.0%
TAATGGTCTATACTTGACAG+TGG - tig0024731:26986-27005 None:intergenic 35.0%
! CACTTGCAATTTTCTTACCT+TGG + tig0024731:27039-27058 Msa1419850:intron 35.0%
! TTGCAATTTTCTTACCTTGG+TGG + tig0024731:27042-27061 Msa1419850:intron 35.0%
GACAAAAGAAAAATCCACCA+AGG - tig0024731:27059-27078 None:intergenic 35.0%
!!! TTTTTGAGACTCCTTAATGG+AGG + tig0024731:27115-27134 Msa1419850:intron 35.0%
!! CAATTGTTCACTTGGTTTTC+TGG - tig0024731:27144-27163 None:intergenic 35.0%
GTTTGCATCAATTGTTCACT+TGG - tig0024731:27152-27171 None:intergenic 35.0%
!! TCAGGGAGAGGATTTTAAAA+AGG + tig0024731:27443-27462 Msa1419850:intron 35.0%
ATATGATCAAGCTAACTTCC+TGG + tig0024731:27778-27797 Msa1419850:intron 35.0%
CATGTTGTATGATGCATTAG+GGG - tig0024731:27895-27914 None:intergenic 35.0%
GCATGTTGTATGATGCATTA+GGG - tig0024731:27896-27915 None:intergenic 35.0%
TGCATGTTGTATGATGCATT+AGG - tig0024731:27897-27916 None:intergenic 35.0%
ATGCATCATACAACATGCAA+AGG + tig0024731:27898-27917 Msa1419850:CDS 35.0%
TACAACATGCAAAGGTTCAA+AGG + tig0024731:27906-27925 Msa1419850:CDS 35.0%
! CAAAGGTATGATAGAAAGCT+AGG + tig0024731:27923-27942 Msa1419850:intron 35.0%
TTCTTCAATAACCTCTGTTC+TGG - tig0024731:28179-28198 None:intergenic 35.0%
GAGGTTATTGAAGAAGTTGA+CGG + tig0024731:28184-28203 Msa1419850:CDS 35.0%
! TATTGTGTTTTCCTCCCTTA+TGG + tig0024731:28229-28248 Msa1419850:CDS 35.0%
! ATTGTGTTTTCCTCCCTTAT+GGG + tig0024731:28230-28249 Msa1419850:CDS 35.0%
GAGCTTAAAAATGCTTTCCT+TGG + tig0024731:28447-28466 Msa1419850:intron 35.0%
!! TGGATATTTGATGATGCAAC+AGG + tig0024731:28639-28658 Msa1419850:exon 35.0%
!! GGATATTTGATGATGCAACA+GGG + tig0024731:28640-28659 Msa1419850:exon 35.0%
CTTGACTACGATGTAATGTA+TGG - tig0024731:28697-28716 None:intergenic 35.0%
!! CAGGTTTTTCAATATGCTAG+CGG + tig0024731:28719-28738 Msa1419850:three_prime_UTR 35.0%
TGTTTCTCTTAATTGAAGCC+AGG + tig0024731:28751-28770 Msa1419850:three_prime_UTR 35.0%
! TGGCATTTTTGCGATTTGAA+TGG + tig0024731:28795-28814 Msa1419850:three_prime_UTR 35.0%
TGAAGAAGAATGAAGACGGA+AGG - tig0024731:17886-17905 None:intergenic 40.0%
GGTTTAGAGAGAATGGAAAG+TGG - tig0024731:17915-17934 None:intergenic 40.0%
TTTCCATTCTCTCTAAACCC+AGG + tig0024731:17916-17935 Msa1419850:CDS 40.0%
TTACCTGGGTTTAGAGAGAA+TGG - tig0024731:17922-17941 None:intergenic 40.0%
! TCAGGAAGAGATTTTCTCTG+AGG + tig0024731:18150-18169 Msa1419850:intron 40.0%
CACCATTTGACACCAAACTA+GGG - tig0024731:18187-18206 None:intergenic 40.0%
ACACCATTTGACACCAAACT+AGG - tig0024731:18188-18207 None:intergenic 40.0%
AAAAGGCCTGGGATGTATAT+TGG + tig0024731:18837-18856 Msa1419850:CDS 40.0%
AGGAATCTGCAGTCATTTGA+AGG - tig0024731:19550-19569 None:intergenic 40.0%
CTTTGTAGTTGGATGCATGT+CGG - tig0024731:19574-19593 None:intergenic 40.0%
!! TGCTTTAGAGACAGTGTTGA+CGG + tig0024731:19599-19618 Msa1419850:CDS 40.0%
TACTTGAATACCGAGTCTAG+AGG + tig0024731:19634-19653 Msa1419850:intron 40.0%
! AAATTTGGTGGCATCAACAG+TGG + tig0024731:19749-19768 Msa1419850:CDS 40.0%
TCTGTTTCAGGAGGTTTACA+TGG + tig0024731:19776-19795 Msa1419850:CDS 40.0%
CCATATGAACCTTCTTTGTC+AGG - tig0024731:20244-20263 None:intergenic 40.0%
CCTGACAAAGAAGGTTCATA+TGG + tig0024731:20241-20260 Msa1419850:intron 40.0%
GTACTCAAATTCAATAGCGG+TGG - tig0024731:20361-20380 None:intergenic 40.0%
!! CAGTTTAGGGTCGTTTGTTT+TGG - tig0024731:21064-21083 None:intergenic 40.0%
AAGCTCAAGCTACTAAGTGA+AGG - tig0024731:21095-21114 None:intergenic 40.0%
AGCGTTACATACTACTCTGT+TGG + tig0024731:21194-21213 Msa1419850:intron 40.0%
AAATTCGGCACTTCTTCTGA+AGG - tig0024731:21275-21294 None:intergenic 40.0%
GCAAGCAACATTGCAAAAGA+TGG - tig0024731:21339-21358 None:intergenic 40.0%
TAGAGGGACTCCAAATTTCA+AGG - tig0024731:21400-21419 None:intergenic 40.0%
GTCCCTCTAATAGATGAAAC+AGG + tig0024731:21411-21430 Msa1419850:intron 40.0%
TACCGTGCAATTTAGCATAG+TGG + tig0024731:21447-21466 Msa1419850:intron 40.0%
GTCCACTATGCTAAATTGCA+CGG - tig0024731:21452-21471 None:intergenic 40.0%
TCCTATAAACATGGATGTGC+AGG + tig0024731:21682-21701 Msa1419850:intron 40.0%
TCCTGCACATCCATGTTTAT+AGG - tig0024731:21686-21705 None:intergenic 40.0%
AGAGGACAATGATCCAGAAA+AGG + tig0024731:21779-21798 Msa1419850:CDS 40.0%
!! TTCCAGTTGTTGGTTTGCTT+AGG + tig0024731:21930-21949 Msa1419850:intron 40.0%
ATCCTAAGCAAACCAACAAC+TGG - tig0024731:21935-21954 None:intergenic 40.0%
TCAACTTTGAACATCTCTCC+AGG + tig0024731:22138-22157 Msa1419850:intron 40.0%
CAACTTTGAACATCTCTCCA+GGG + tig0024731:22139-22158 Msa1419850:intron 40.0%
!! TTAAGGTGTTGTTGTGGCAT+TGG + tig0024731:22198-22217 Msa1419850:intron 40.0%
TATCGCTTCAAACAATCCCT+CGG - tig0024731:22278-22297 None:intergenic 40.0%
! GGGATTGTTTGAAGCGATAA+CGG + tig0024731:22279-22298 Msa1419850:intron 40.0%
! ATTGTTTGAAGCGATAACGG+TGG + tig0024731:22282-22301 Msa1419850:intron 40.0%
! TTGTTTGAAGCGATAACGGT+GGG + tig0024731:22283-22302 Msa1419850:intron 40.0%
AGGAACCAAAGCCAAAGAAT+TGG - tig0024731:22375-22394 None:intergenic 40.0%
TGTGGATGTCCGCATATTTA+CGG + tig0024731:22464-22483 Msa1419850:intron 40.0%
CAACAGATCCTTTGCCTATT+TGG - tig0024731:22707-22726 None:intergenic 40.0%
CAAATAGGCAAAGGATCTGT+TGG + tig0024731:22705-22724 Msa1419850:intron 40.0%
TATCAGTTATGACCATGCAG+GGG - tig0024731:22865-22884 None:intergenic 40.0%
CTTATCAGTTATGACCATGC+AGG - tig0024731:22867-22886 None:intergenic 40.0%
CTGCATGGTCATAACTGATA+AGG + tig0024731:22865-22884 Msa1419850:intron 40.0%
GTCATAACTGATAAGGCCTT+GGG + tig0024731:22872-22891 Msa1419850:intron 40.0%
GAAATCTCTCTCCATCACAA+AGG - tig0024731:23052-23071 None:intergenic 40.0%
TAACTCTATGACCCATATGC+AGG + tig0024731:23178-23197 Msa1419850:intron 40.0%
AATGCTCAGGCAGCATATAT+AGG - tig0024731:23257-23276 None:intergenic 40.0%
! AACAGAGATGTAAGAAGTGC+AGG - tig0024731:23650-23669 None:intergenic 40.0%
! CGGATTTGAGTATCTCGTTT+TGG + tig0024731:23694-23713 Msa1419850:intron 40.0%
TCAATTCATCACAAGGAGTG+AGG - tig0024731:23728-23747 None:intergenic 40.0%
GTACAATCCGATTGTCCATT+TGG - tig0024731:23816-23835 None:intergenic 40.0%
GCATACTCCGATACAATACT+AGG + tig0024731:23925-23944 Msa1419850:CDS 40.0%
AATAGTATACGCACTGTCGA+CGG + tig0024731:23955-23974 Msa1419850:CDS 40.0%
CAACAGGGCAAATAGATGAA+AGG - tig0024731:24082-24101 None:intergenic 40.0%
!! ATTTTAGTAGGGGAAAGGCA+TGG - tig0024731:24105-24124 None:intergenic 40.0%
! TTTCCTGTTATGTGGCTTTG+AGG + tig0024731:24198-24217 Msa1419850:intron 40.0%
CTACAACTTGCATGTATCCA+AGG + tig0024731:24237-24256 Msa1419850:intron 40.0%
TTGTGCATAAATCTCACCCT+TGG - tig0024731:24257-24276 None:intergenic 40.0%
! TTGGTGCCTAGATTGATGAT+AGG + tig0024731:24376-24395 Msa1419850:intron 40.0%
! TGGTGCCTAGATTGATGATA+GGG + tig0024731:24377-24396 Msa1419850:intron 40.0%
CATGTCCGTAGAAGAACAAT+TGG - tig0024731:24479-24498 None:intergenic 40.0%
AACATGTGTTGTCTCAGTCA+AGG + tig0024731:24826-24845 Msa1419850:CDS 40.0%
GTCCTTCAAACTCTGGATTT+GGG - tig0024731:24853-24872 None:intergenic 40.0%
TGTCCTTCAAACTCTGGATT+TGG - tig0024731:24854-24873 None:intergenic 40.0%
TTGTTGCATAAAGACGAGGT+TGG + tig0024731:24990-25009 Msa1419850:intron 40.0%
TGTTGCATAAAGACGAGGTT+GGG + tig0024731:24991-25010 Msa1419850:intron 40.0%
TGGATGCAGTTCCAAATACT+CGG - tig0024731:25067-25086 None:intergenic 40.0%
! AGCACTGAATCAAGAACATC+TGG - tig0024731:25087-25106 None:intergenic 40.0%
TTTGTCTCATTAGGCAGCTT+TGG + tig0024731:25259-25278 Msa1419850:intron 40.0%
TTTGGCTGCAAAAAGAGCAA+GGG + tig0024731:25277-25296 Msa1419850:CDS 40.0%
TGCAAAAAGAGCAAGGGAAT+TGG + tig0024731:25283-25302 Msa1419850:CDS 40.0%
TTGAGATCTTCATCTCTTCC+TGG + tig0024731:25323-25342 Msa1419850:CDS 40.0%
TCATCAAATCCTGAAGACTG+TGG + tig0024731:25365-25384 Msa1419850:CDS 40.0%
AGAGATATACCACAGTCTTC+AGG - tig0024731:25377-25396 None:intergenic 40.0%
! GTCGCACAACTTTAGTTCAA+AGG - tig0024731:25437-25456 None:intergenic 40.0%
CAAGGCTACTGGGAATTAAT+AGG - tig0024731:25495-25514 None:intergenic 40.0%
CTTTGATCATACAAGGCTAC+TGG - tig0024731:25506-25525 None:intergenic 40.0%
!! CAGTAGCCTTGTATGATCAA+AGG + tig0024731:25504-25523 Msa1419850:intron 40.0%
TTAAAGGTAAAGAGAGACCG+AGG - tig0024731:25605-25624 None:intergenic 40.0%
AGAGACAGTCTGGTAGTTAA+AGG - tig0024731:25621-25640 None:intergenic 40.0%
TAAGAGATGTGTTCCAGCAT+AGG + tig0024731:25703-25722 Msa1419850:intron 40.0%
CGTTCATGCCAAATTAGTTG+AGG + tig0024731:25787-25806 Msa1419850:intron 40.0%
CAAGGATCCCTCAACTAATT+TGG - tig0024731:25798-25817 None:intergenic 40.0%
ATAGTTGAAGGTGATTCAGC+TGG + tig0024731:25903-25922 Msa1419850:CDS 40.0%
TAGTTGAAGGTGATTCAGCT+GGG + tig0024731:25904-25923 Msa1419850:CDS 40.0%
TTTAGACCACTTGGTCATAG+AGG + tig0024731:26163-26182 Msa1419850:intron 40.0%
ATCAAAGTCTCGTTGACAAG+TGG - tig0024731:26365-26384 None:intergenic 40.0%
TAAGAGTTAAGTAGGTCGCT+TGG - tig0024731:26438-26457 None:intergenic 40.0%
CGAGCCTTTGTTCTGTTAAT+GGG - tig0024731:26465-26484 None:intergenic 40.0%
AAAGGTTACGATGCAATGAC+AGG + tig0024731:26509-26528 Msa1419850:intron 40.0%
TGACAAATTAACTGCTCCAC+AGG - tig0024731:26671-26690 None:intergenic 40.0%
AGAATAGCCTGCAACAAGTA+TGG - tig0024731:26763-26782 None:intergenic 40.0%
TCAGAATCTTACCCCTCAAA+GGG - tig0024731:26786-26805 None:intergenic 40.0%
TTCAGAATCTTACCCCTCAA+AGG - tig0024731:26787-26806 None:intergenic 40.0%
!! TTAATCCTTGGTCTTGGTCT+CGG + tig0024731:26859-26878 Msa1419850:CDS 40.0%
!! TTGTTCACTTGGTTTTCTGG+AGG - tig0024731:27141-27160 None:intergenic 40.0%
! TGTTCTTTTTGTTCAGGGAG+AGG + tig0024731:27431-27450 Msa1419850:intron 40.0%
CAGTAGCAGAGTTCGAATAT+GGG - tig0024731:27523-27542 None:intergenic 40.0%
TCAGTAGCAGAGTTCGAATA+TGG - tig0024731:27524-27543 None:intergenic 40.0%
TCAAGGCAAACCTTGTAAAG+TGG - tig0024731:27728-27747 None:intergenic 40.0%
TGCCTTGAACTTCTGTTACA+AGG + tig0024731:27740-27759 Msa1419850:intron 40.0%
CACCTTGTAACAGAAGTTCA+AGG - tig0024731:27745-27764 None:intergenic 40.0%
! CCTGGCGTTTTTACTGAAAT+CGG + tig0024731:27796-27815 Msa1419850:intron 40.0%
TCGGTCTGTACATAACAGTA+TGG + tig0024731:28083-28102 Msa1419850:intron 40.0%
AGATGATGCCTTTACAACTG+TGG + tig0024731:28138-28157 Msa1419850:CDS 40.0%
GATGATGCCTTTACAACTGT+GGG + tig0024731:28139-28158 Msa1419850:CDS 40.0%
GTAATACCAACTAGGTTTCC+AGG - tig0024731:28389-28408 None:intergenic 40.0%
CATGATTGATCTTGATCAGC+TGG + tig0024731:28619-28638 Msa1419850:CDS 40.0%
CAACAGGGTGTGGAAAAAAT+AGG + tig0024731:28655-28674 Msa1419850:three_prime_UTR 40.0%
ATTACATCGTAGTCAAGCAC+AGG + tig0024731:28700-28719 Msa1419850:three_prime_UTR 40.0%
AGTAGTCATTTGCAGTTGCT+GGG + tig0024731:28838-28857 Msa1419850:three_prime_UTR 40.0%
! AGGAGCTGGTAACTTTTGAA+GGG - tig0024731:28972-28991 None:intergenic 40.0%
GACATAATCAAACACAGCTC+AGG - tig0024731:28992-29011 None:intergenic 40.0%
GAATGAAGACGGAAGGAAGA+GGG - tig0024731:17879-17898 None:intergenic 45.0%
AGAATGAAGACGGAAGGAAG+AGG - tig0024731:17880-17899 None:intergenic 45.0%
!! GTCCCTAGTTTGGTGTCAAA+TGG + tig0024731:18182-18201 Msa1419850:CDS 45.0%
TGTGTAGGTACTTGAAGGAC+TGG + tig0024731:18803-18822 Msa1419850:intron 45.0%
GACTGGACCCTGTAAGAAAA+AGG + tig0024731:18820-18839 Msa1419850:CDS 45.0%
ACCCTGTAAGAAAAAGGCCT+GGG + tig0024731:18826-18845 Msa1419850:CDS 45.0%
! TCCCAGGCCTTTTTCTTACA+GGG - tig0024731:18830-18849 None:intergenic 45.0%
! ATCCCAGGCCTTTTTCTTAC+AGG - tig0024731:18831-18850 None:intergenic 45.0%
GTGCTTCCAATATACATCCC+AGG - tig0024731:18846-18865 None:intergenic 45.0%
! GGGATGTATATTGGAAGCAC+TGG + tig0024731:18846-18865 Msa1419850:CDS 45.0%
ACCATTGTCAGCAATGCTGA+CGG - tig0024731:19069-19088 None:intergenic 45.0%
CTGAGTTCAAATTTCCCACC+TGG + tig0024731:19270-19289 Msa1419850:intron 45.0%
GGTTAATACTCACTGGTGCA+CGG + tig0024731:19683-19702 Msa1419850:intron 45.0%
TTGCACGCTGGTGGAAAATT+TGG + tig0024731:19734-19753 Msa1419850:CDS 45.0%
AACAGTGGCTACTCTGTTTC+AGG + tig0024731:19764-19783 Msa1419850:CDS 45.0%
TCAGGAGGTTTACATGGTGT+TGG + tig0024731:19782-19801 Msa1419850:CDS 45.0%
TGTTGTTAACGCCTTGTCTG+AGG + tig0024731:19811-19830 Msa1419850:CDS 45.0%
AGGAAGATGTACCTCAGACA+AGG - tig0024731:19825-19844 None:intergenic 45.0%
AGAGGTTCTCTTCCTTGTTC+TGG + tig0024731:20031-20050 Msa1419850:intron 45.0%
AGGCACTAGAGGTAACAGTA+TGG + tig0024731:20101-20120 Msa1419850:intron 45.0%
AGGTAACAGTATGGCGTGAA+GGG + tig0024731:20110-20129 Msa1419850:CDS 45.0%
AACATATTCTCGTGGGAAGC+CGG + tig0024731:20147-20166 Msa1419850:CDS 45.0%
ACACAGTTCAGAGTTGTCAC+CGG - tig0024731:20169-20188 None:intergenic 45.0%
ACACAATAGCTGGACGCATA+AGG + tig0024731:20382-20401 Msa1419850:CDS 45.0%
CACAATAGCTGGACGCATAA+GGG + tig0024731:20383-20402 Msa1419850:CDS 45.0%
!! GTTGGCTTTCCTTAACCCAA+AGG + tig0024731:20407-20426 Msa1419850:CDS 45.0%
!! TTAGCATAGTGGACTCTTCC+TGG + tig0024731:21458-21477 Msa1419850:intron 45.0%
CAAAATGCTATGGACAGCTC+AGG - tig0024731:21662-21681 None:intergenic 45.0%
AGCGCAATCGTAAGCTACAT+AGG - tig0024731:21753-21772 None:intergenic 45.0%
TGTAGCTTACGATTGCGCTT+CGG + tig0024731:21754-21773 Msa1419850:intron 45.0%
! GTATTTCTATGCTGGGGGAT+TGG + tig0024731:21815-21834 Msa1419850:CDS 45.0%
!! TTTGGCTTTGGTTCCTGTCA+AGG + tig0024731:22379-22398 Msa1419850:intron 45.0%
!! TTGGCTTTGGTTCCTGTCAA+GGG + tig0024731:22380-22399 Msa1419850:intron 45.0%
ACAATTGAAACACCCCTGCA+TGG + tig0024731:22850-22869 Msa1419850:intron 45.0%
GGTCATAACTGATAAGGCCT+TGG + tig0024731:22871-22890 Msa1419850:intron 45.0%
TAGCACTAGCTCCTTTGTGA+TGG + tig0024731:23038-23057 Msa1419850:intron 45.0%
GGAGAGAGATTTCTCTGCTT+AGG + tig0024731:23059-23078 Msa1419850:intron 45.0%
TGAGTTTCCTTCTCTACGCT+TGG + tig0024731:23306-23325 Msa1419850:intron 45.0%
AACTCATCCAAGCGTAGAGA+AGG - tig0024731:23316-23335 None:intergenic 45.0%
CATGAACAGCTTTCTGCAAC+AGG - tig0024731:23545-23564 None:intergenic 45.0%
GGTAGCACAAATAGAGTGCA+TGG - tig0024731:24163-24182 None:intergenic 45.0%
ATGCCTCAAAGCCACATAAC+AGG - tig0024731:24204-24223 None:intergenic 45.0%
TCGGCTTATCACAAGTGTCT+TGG - tig0024731:24338-24357 None:intergenic 45.0%
TCTACGGACATGATTCTGCA+AGG + tig0024731:24487-24506 Msa1419850:intron 45.0%
GTCCCAAATCCAGAGTTTGA+AGG + tig0024731:24848-24867 Msa1419850:CDS 45.0%
CTTTGGCTGCAAAAAGAGCA+AGG + tig0024731:25276-25295 Msa1419850:CDS 45.0%
AGTTGAAGGTGATTCAGCTG+GGG + tig0024731:25905-25924 Msa1419850:CDS 45.0%
GTCAGGTGGTTACACTTTGT+AGG - tig0024731:25992-26011 None:intergenic 45.0%
GCGAGCCTTTGTTCTGTTAA+TGG - tig0024731:26466-26485 None:intergenic 45.0%
! GTGGGCGAAGTTTTCACATA+TGG + tig0024731:26547-26566 Msa1419850:intron 45.0%
! TATCGGACCATACTTGTTGC+AGG + tig0024731:26753-26772 Msa1419850:intron 45.0%
!! TTTTCTGGAGGCCTCCATTA+AGG - tig0024731:27129-27148 None:intergenic 45.0%
! AAGAGCATAGAGTTCGAGCA+CGG - tig0024731:27380-27399 None:intergenic 45.0%
! ATGAAGGAGCAGGTTTTGCA+GGG - tig0024731:27585-27604 None:intergenic 45.0%
TTCTTCTTCCATGAAGGAGC+AGG - tig0024731:27595-27614 None:intergenic 45.0%
TGGTGTTCCACCACTTTACA+AGG + tig0024731:27715-27734 Msa1419850:CDS 45.0%
AGGCAAACCTTGTAAAGTGG+TGG - tig0024731:27725-27744 None:intergenic 45.0%
CCGATTTCAGTAAAAACGCC+AGG - tig0024731:27799-27818 None:intergenic 45.0%
! GCGTTTTTACTGAAATCGGC+AGG + tig0024731:27800-27819 Msa1419850:intron 45.0%
ACTGAAATCGGCAGGTTACA+AGG + tig0024731:27808-27827 Msa1419850:intron 45.0%
CTGAAATCGGCAGGTTACAA+GGG + tig0024731:27809-27828 Msa1419850:intron 45.0%
TGAAATCGGCAGGTTACAAG+GGG + tig0024731:27810-27829 Msa1419850:intron 45.0%
GTTGTCTCCCACAGTTGTAA+AGG - tig0024731:28149-28168 None:intergenic 45.0%
! TAACCTCTGTTCTGGATCCA+TGG - tig0024731:28171-28190 None:intergenic 45.0%
ATATCAGGTGGATGTTCGGA+AGG + tig0024731:28574-28593 Msa1419850:intron 45.0%
!! TTTGATGATGCAACAGGGTG+TGG + tig0024731:28645-28664 Msa1419850:exon 45.0%
AAATCGCAAAAATGCCACCG+AGG - tig0024731:28792-28811 None:intergenic 45.0%
TGGATTATTCACTGGCCAGA+TGG + tig0024731:28815-28834 Msa1419850:three_prime_UTR 45.0%
CTGCAAATGACTACTCCATC+TGG - tig0024731:28833-28852 None:intergenic 45.0%
GAGTAGTCATTTGCAGTTGC+TGG + tig0024731:28837-28856 Msa1419850:three_prime_UTR 45.0%
! CAGGAGCTGGTAACTTTTGA+AGG - tig0024731:28973-28992 None:intergenic 45.0%
!!! TTTTAAAAAAAACAATATTA+GGG - tig0024731:20951-20970 None:intergenic 5.0%
!!! ATTTTAAAAAAAACAATATT+AGG - tig0024731:20952-20971 None:intergenic 5.0%
!!! TTTTTAATTTAATTTATATC+AGG + tig0024731:28559-28578 Msa1419850:intron 5.0%
TCTTCCTCTCCTTCGCTTCA+TGG + tig0024731:17833-17852 Msa1419850:CDS 50.0%
GACCCTGTAAGAAAAAGGCC+TGG + tig0024731:18825-18844 Msa1419850:CDS 50.0%
! GCTGTTGATGAAGCTCAAGC+TGG + tig0024731:19002-19021 Msa1419850:CDS 50.0%
TCCGTCAGCATTGCTGACAA+TGG + tig0024731:19065-19084 Msa1419850:CDS 50.0%
AGCATTGCTGACAATGGTCG+CGG + tig0024731:19071-19090 Msa1419850:CDS 50.0%
GTAGTTGGATGCATGTCGGT+AGG - tig0024731:19570-19589 None:intergenic 50.0%
ACTTTGCAGATCTTGCACGC+TGG + tig0024731:19722-19741 Msa1419850:intron 50.0%
CACGCTGGTGGAAAATTTGG+TGG + tig0024731:19737-19756 Msa1419850:CDS 50.0%
AGTGGCTACTCTGTTTCAGG+AGG + tig0024731:19767-19786 Msa1419850:CDS 50.0%
ACTGTTACCTCTAGTGCCTG+TGG - tig0024731:20100-20119 None:intergenic 50.0%
GAGGTAACAGTATGGCGTGA+AGG + tig0024731:20109-20128 Msa1419850:CDS 50.0%
GAAGGCTCGTGAGCAGTTTA+GGG - tig0024731:21077-21096 None:intergenic 50.0%
TGAAGGCTCGTGAGCAGTTT+AGG - tig0024731:21078-21097 None:intergenic 50.0%
TACGATTGCGCTTCGGAAAG+AGG + tig0024731:21761-21780 Msa1419850:CDS 50.0%
ACATCTCTCCAGGGCTTTCA+TGG + tig0024731:22148-22167 Msa1419850:intron 50.0%
AACTAGTGCCATGAAAGCCC+TGG - tig0024731:22159-22178 None:intergenic 50.0%
!! ATGAGTGGACTAGGAATCCG+AGG + tig0024731:22258-22277 Msa1419850:intron 50.0%
!! TGAGTGGACTAGGAATCCGA+GGG + tig0024731:22259-22278 Msa1419850:intron 50.0%
! TTTGAAGCGATAACGGTGGG+AGG + tig0024731:22286-22305 Msa1419850:intron 50.0%
! TTGAAGCGATAACGGTGGGA+GGG + tig0024731:22287-22306 Msa1419850:intron 50.0%
! TTTGGTTCCTGTCAAGGGCT+GGG + tig0024731:22385-22404 Msa1419850:intron 50.0%
AAAAACTCCCAGCCCTTGAC+AGG - tig0024731:22395-22414 None:intergenic 50.0%
GCGGACATCCACACCAAAAT+TGG - tig0024731:22457-22476 None:intergenic 50.0%
TTTCCCTGCTCTTCTCGAGT+GGG + tig0024731:22512-22531 Msa1419850:intron 50.0%
TTGGCTGAGCTGTCTTCTGA+TGG + tig0024731:22724-22743 Msa1419850:intron 50.0%
AACTGATAAGGCCTTGGGCT+TGG + tig0024731:22877-22896 Msa1419850:intron 50.0%
GAGAGAGTGGCGAGTATTAG+AGG - tig0024731:23121-23140 None:intergenic 50.0%
! AAGAAGTGCAGGACTGAGTG+TGG - tig0024731:23639-23658 None:intergenic 50.0%
! AGTGGAGAGCATGTGAGAGA+AGG + tig0024731:24800-24819 Msa1419850:CDS 50.0%
! AAATCCAGAGGTGCGGAAAG+TGG + tig0024731:25014-25033 Msa1419850:CDS 50.0%
ATCTCTTCCTGGCAAACTCG+CGG + tig0024731:25334-25353 Msa1419850:CDS 50.0%
CTACCAGACTGTCTCTCATC+TGG + tig0024731:25625-25644 Msa1419850:intron 50.0%
AGACCAGATGAGAGACAGTC+TGG - tig0024731:25631-25650 None:intergenic 50.0%
GTTGAAGGTGATTCAGCTGG+GGG + tig0024731:25906-25925 Msa1419850:CDS 50.0%
GTGCTAAGCAAGGTCGTGAT+AGG + tig0024731:25931-25950 Msa1419850:CDS 50.0%
TGTGTGTGCTCATGCATGTC+AGG - tig0024731:26009-26028 None:intergenic 50.0%
TCACAGCTCTCTTGCGTGAA+GGG - tig0024731:26067-26086 None:intergenic 50.0%
AGAGAGCTGTGAGCTTCGAT+TGG + tig0024731:26075-26094 Msa1419850:intron 50.0%
TCACAGCCTCTATGACCAAG+TGG - tig0024731:26172-26191 None:intergenic 50.0%
TAGACGAAATGGGGGCTGTA+AGG + tig0024731:26319-26338 Msa1419850:intron 50.0%
TGCAGGCTATTCTCCCTTTG+AGG + tig0024731:26770-26789 Msa1419850:intron 50.0%
GCAGGCTATTCTCCCTTTGA+GGG + tig0024731:26771-26790 Msa1419850:intron 50.0%
CAGGCTATTCTCCCTTTGAG+GGG + tig0024731:26772-26791 Msa1419850:intron 50.0%
AGAGCATAGAGTTCGAGCAC+GGG - tig0024731:27379-27398 None:intergenic 50.0%
TTGACCGATGCTGATGTCGA+TGG + tig0024731:27495-27514 Msa1419850:CDS 50.0%
! CATGAAGGAGCAGGTTTTGC+AGG - tig0024731:27586-27605 None:intergenic 50.0%
CTGCAAAACCTGCTCCTTCA+TGG + tig0024731:27584-27603 Msa1419850:intron 50.0%
ACAACTGTGGGAGACAACCA+TGG + tig0024731:28151-28170 Msa1419850:CDS 50.0%
CAACCATGGATCCAGAACAG+AGG + tig0024731:28165-28184 Msa1419850:CDS 50.0%
TTTCCTCCCTTATGGGTGCT+CGG + tig0024731:28237-28256 Msa1419850:CDS 50.0%
CATTACCCGAGCACCCATAA+GGG - tig0024731:28246-28265 None:intergenic 50.0%
ACATTACCCGAGCACCCATA+AGG - tig0024731:28247-28266 None:intergenic 50.0%
ACACACACTTAGGCTTGTCC+TGG + tig0024731:28368-28387 Msa1419850:intron 50.0%
GCTTGTCCTGGAAACCTAGT+TGG + tig0024731:28380-28399 Msa1419850:intron 50.0%
AGAATCTACGCGGTCAACCA+AGG - tig0024731:28467-28486 None:intergenic 50.0%
ATCAAACACAGCTCAGGAGC+TGG - tig0024731:28986-29005 None:intergenic 50.0%
GGAAGACGACGTAGTAGGAC+TGG - tig0024731:17819-17838 None:intergenic 55.0%
GGAGAGGAAGACGACGTAGT+AGG - tig0024731:17824-17843 None:intergenic 55.0%
GAAGCCATGAAGCGAAGGAG+AGG - tig0024731:17840-17859 None:intergenic 55.0%
TGCGAGAAGCCATGAAGCGA+AGG - tig0024731:17845-17864 None:intergenic 55.0%
ACCAAATGATGCAACCCGCG+CGG - tig0024731:18873-18892 None:intergenic 55.0%
GCATTGCTGACAATGGTCGC+GGG + tig0024731:19072-19091 Msa1419850:CDS 55.0%
CATTGCTGACAATGGTCGCG+GGG + tig0024731:19073-19092 Msa1419850:CDS 55.0%
TTGCAGATCTTGCACGCTGG+TGG + tig0024731:19725-19744 Msa1419850:intron 55.0%
TGTGGAGTTGGACAGCGAAG+AGG - tig0024731:20082-20101 None:intergenic 55.0%
TCTTCGCTGTCCAACTCCAC+AGG + tig0024731:20081-20100 Msa1419850:intron 55.0%
TCCAACTCCACAGGCACTAG+AGG + tig0024731:20090-20109 Msa1419850:intron 55.0%
ACCTCTAGTGCCTGTGGAGT+TGG - tig0024731:20094-20113 None:intergenic 55.0%
AACAGTATGGCGTGAAGGGC+TGG + tig0024731:20114-20133 Msa1419850:CDS 55.0%
AGCTGGACGCATAAGGGAGT+TGG + tig0024731:20389-20408 Msa1419850:CDS 55.0%
ACAGCTCAGGCTCACTCGAA+AGG - tig0024731:21649-21668 None:intergenic 55.0%
! TGAAGCGATAACGGTGGGAG+GGG + tig0024731:22288-22307 Msa1419850:intron 55.0%
!! AGGGGCGGTTTTGGTACTCT+GGG + tig0024731:22306-22325 Msa1419850:intron 55.0%
! CTTTGGTTCCTGTCAAGGGC+TGG + tig0024731:22384-22403 Msa1419850:intron 55.0%
CTTTCCCTGCTCTTCTCGAG+TGG + tig0024731:22511-22530 Msa1419850:intron 55.0%
TTCCCTGCTCTTCTCGAGTG+GGG + tig0024731:22513-22532 Msa1419850:intron 55.0%
GCAGGACTGAGTGTGGATGA+AGG - tig0024731:23632-23651 None:intergenic 55.0%
AGTATACGCACTGTCGACGG+TGG + tig0024731:23958-23977 Msa1419850:CDS 55.0%
! AGGGGAAAGGCATGGCAACA+GGG - tig0024731:24097-24116 None:intergenic 55.0%
! TAGGGGAAAGGCATGGCAAC+AGG - tig0024731:24098-24117 None:intergenic 55.0%
GACGAGGTTGGGAAATCCAG+AGG + tig0024731:25002-25021 Msa1419850:intron 55.0%
GGTTGGGAAATCCAGAGGTG+CGG + tig0024731:25007-25026 Msa1419850:CDS 55.0%
TCAACCACTTTCCGCACCTC+TGG - tig0024731:25021-25040 None:intergenic 55.0%
GAACAATCCGCGAGTTTGCC+AGG - tig0024731:25344-25363 None:intergenic 55.0%
GTGTGCTCATGCATGTCAGG+TGG - tig0024731:26006-26025 None:intergenic 55.0%
ACAGCTCTCTTGCGTGAAGG+GGG - tig0024731:26065-26084 None:intergenic 55.0%
CACAGCTCTCTTGCGTGAAG+GGG - tig0024731:26066-26085 None:intergenic 55.0%
CTCACAGCTCTCTTGCGTGA+AGG - tig0024731:26068-26087 None:intergenic 55.0%
TAGGGGCGGTTTAGACCACT+TGG + tig0024731:26154-26173 Msa1419850:intron 55.0%
TCACTCCGAGACCAAGACCA+AGG - tig0024731:26867-26886 None:intergenic 55.0%
! TGGTCTTGGTCTCGGAGTGA+AGG + tig0024731:26867-26886 Msa1419850:CDS 55.0%
GAGCATAGAGTTCGAGCACG+GGG - tig0024731:27378-27397 None:intergenic 55.0%
GGCACCATCGACATCAGCAT+CGG - tig0024731:27502-27521 None:intergenic 55.0%
TTCCTCCCTTATGGGTGCTC+GGG + tig0024731:28238-28257 Msa1419850:CDS 55.0%
ATGCCACCGAGGAACACAAC+AGG - tig0024731:28781-28800 None:intergenic 55.0%
CCAAATGATGCAACCCGCGC+GGG - tig0024731:18872-18891 None:intergenic 60.0%
GCTCAGGCTCACTCGAAAGG+TGG - tig0024731:21646-21665 None:intergenic 60.0%
!! GAGGGGCGGTTTTGGTACTC+TGG + tig0024731:22305-22324 Msa1419850:intron 60.0%
!! GGGGCGGTTTTGGTACTCTG+GGG + tig0024731:22307-22326 Msa1419850:intron 60.0%
!! CTCTGGGGTGTCTGAATCCG+CGG + tig0024731:22322-22341 Msa1419850:intron 60.0%
GAGGGCAGAAACATCAGCCG+CGG - tig0024731:22342-22361 None:intergenic 60.0%
TCCCTGCTCTTCTCGAGTGG+GGG + tig0024731:22514-22533 Msa1419850:intron 60.0%
TCCCCCACTCGAGAAGAGCA+GGG - tig0024731:22518-22537 None:intergenic 60.0%
CTACCTGCTCTCCAAGCCCA+AGG - tig0024731:22891-22910 None:intergenic 60.0%
GACGGTGGCACCCATATCGA+TGG + tig0024731:23973-23992 Msa1419850:CDS 60.0%
!! GCTGGGGGAAGTGCTAAGCA+AGG + tig0024731:25921-25940 Msa1419850:CDS 60.0%
AGGTCGTGATAGGCGCTTCC+AGG + tig0024731:25941-25960 Msa1419850:CDS 60.0%
TACCCGAGCACCCATAAGGG+AGG - tig0024731:28243-28262 None:intergenic 60.0%
!! AGGAACACAACAGGAGCGCC+TGG - tig0024731:28772-28791 None:intergenic 60.0%
GGCGCTCCTGTTGTGTTCCT+CGG + tig0024731:28772-28791 Msa1419850:three_prime_UTR 60.0%
GCTCCTGTTGTGTTCCTCGG+TGG + tig0024731:28775-28794 Msa1419850:three_prime_UTR 60.0%
!! ATTGGAAGCACTGGCCCGCG+CGG + tig0024731:18855-18874 Msa1419850:CDS 65.0%
! CCCGCGCGGGTTGCATCATT+TGG + tig0024731:18869-18888 Msa1419850:CDS 65.0%
! AGCGATAACGGTGGGAGGGG+CGG + tig0024731:22291-22310 Msa1419850:intron 65.0%
! AACGGTGGGAGGGGCGGTTT+TGG + tig0024731:22297-22316 Msa1419850:intron 65.0%
CTCCCCCACTCGAGAAGAGC+AGG - tig0024731:22519-22538 None:intergenic 65.0%
AGGCCTTGGGCTTGGAGAGC+AGG + tig0024731:22885-22904 Msa1419850:intron 65.0%
!! TTGGAAGCACTGGCCCGCGC+GGG + tig0024731:18856-18875 Msa1419850:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0024731 gene 17700 29124 17700 ID=Msa1419850;Name=Msa1419850
tig0024731 mRNA 17700 29124 17700 ID=Msa1419850-mRNA-1;Parent=Msa1419850;Name=Msa1419850-mRNA-1;_AED=0.11;_eAED=0.11;_QI=110|1|1|1|1|1|21|475|726
tig0024731 exon 17700 17937 17700 ID=Msa1419850-mRNA-1:exon:1095;Parent=Msa1419850-mRNA-1
tig0024731 exon 18154 18298 18154 ID=Msa1419850-mRNA-1:exon:1096;Parent=Msa1419850-mRNA-1
tig0024731 exon 18810 18890 18810 ID=Msa1419850-mRNA-1:exon:1097;Parent=Msa1419850-mRNA-1
tig0024731 exon 18981 19094 18981 ID=Msa1419850-mRNA-1:exon:1098;Parent=Msa1419850-mRNA-1
tig0024731 exon 19564 19620 19564 ID=Msa1419850-mRNA-1:exon:1099;Parent=Msa1419850-mRNA-1
tig0024731 exon 19731 19832 19731 ID=Msa1419850-mRNA-1:exon:1100;Parent=Msa1419850-mRNA-1
tig0024731 exon 20103 20253 20103 ID=Msa1419850-mRNA-1:exon:1101;Parent=Msa1419850-mRNA-1
tig0024731 exon 20352 20428 20352 ID=Msa1419850-mRNA-1:exon:1102;Parent=Msa1419850-mRNA-1
tig0024731 exon 21759 21869 21759 ID=Msa1419850-mRNA-1:exon:1103;Parent=Msa1419850-mRNA-1
tig0024731 exon 23552 23622 23552 ID=Msa1419850-mRNA-1:exon:1104;Parent=Msa1419850-mRNA-1
tig0024731 exon 23915 24056 23915 ID=Msa1419850-mRNA-1:exon:1105;Parent=Msa1419850-mRNA-1
tig0024731 exon 24782 24880 24782 ID=Msa1419850-mRNA-1:exon:1106;Parent=Msa1419850-mRNA-1
tig0024731 exon 25003 25131 25003 ID=Msa1419850-mRNA-1:exon:1107;Parent=Msa1419850-mRNA-1
tig0024731 exon 25272 25386 25272 ID=Msa1419850-mRNA-1:exon:1108;Parent=Msa1419850-mRNA-1
tig0024731 exon 25895 25962 25895 ID=Msa1419850-mRNA-1:exon:1109;Parent=Msa1419850-mRNA-1
tig0024731 exon 26775 26888 26775 ID=Msa1419850-mRNA-1:exon:1110;Parent=Msa1419850-mRNA-1
tig0024731 exon 27447 27563 27447 ID=Msa1419850-mRNA-1:exon:1111;Parent=Msa1419850-mRNA-1
tig0024731 exon 27683 27736 27683 ID=Msa1419850-mRNA-1:exon:1112;Parent=Msa1419850-mRNA-1
tig0024731 exon 27822 27927 27822 ID=Msa1419850-mRNA-1:exon:1113;Parent=Msa1419850-mRNA-1
tig0024731 exon 28129 28259 28129 ID=Msa1419850-mRNA-1:exon:1114;Parent=Msa1419850-mRNA-1
tig0024731 exon 28581 29124 28581 ID=Msa1419850-mRNA-1:exon:1115;Parent=Msa1419850-mRNA-1
tig0024731 five_prime_UTR 17700 17809 17700 ID=Msa1419850-mRNA-1:five_prime_utr;Parent=Msa1419850-mRNA-1
tig0024731 CDS 17810 17937 17810 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 18154 18298 18154 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 18810 18890 18810 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 18981 19094 18981 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 19564 19620 19564 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 19731 19832 19731 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 20103 20253 20103 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 20352 20428 20352 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 21759 21869 21759 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 23552 23622 23552 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 23915 24056 23915 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 24782 24880 24782 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 25003 25131 25003 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 25272 25386 25272 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 25895 25962 25895 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 26775 26888 26775 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 27447 27563 27447 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 27683 27736 27683 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 27822 27927 27822 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 28129 28259 28129 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 CDS 28581 28649 28581 ID=Msa1419850-mRNA-1:cds;Parent=Msa1419850-mRNA-1
tig0024731 three_prime_UTR 28650 29124 28650 ID=Msa1419850-mRNA-1:three_prime_utr;Parent=Msa1419850-mRNA-1
Gene Sequence

>Msa1419850

ATGGCACCAGTCCTACTACGTCGTCTTCCTCTCCTTCGCTTCATGGCTTCTCGCACTTTCTTCACTCCCTCTTCCTTCCGTCTTCATTCTTCTTCATCTCTTCCACTTTCCATTCTCTCTAAACCCAGGAAGAGATTTTCTCTGAGGAAATTTTCTGTCCCTAGTTTGGTGTCAAATGGTGTTACTCCAAGAGCTTATATGTCTTCTTTATCAGCAGCTGAAGATATTCATAAGAAGGACAGTTCTAAAGCTTATGGTTCTGATCAAATTCAGGTACTTGAAGGACTGGACCCTGTAAGAAAAAGGCCTGGGATGTATATTGGAAGCACTGGCCCGCGCGGGTTGCATCATTTGGTTTATGAAATTTTGGATAATGCTGTTGATGAAGCTCAAGCTGGATTTGCTTCCAAGATTGATGTTGTTTTACATGCAGATGATTCCGTCAGCATTGCTGACAATGGTCGCGGGATTCCTACCGACATGCATCCAACTACAAAGAAATCTGCTTTAGAGACAGTGTTGACGATCTTGCACGCTGGTGGAAAATTTGGTGGCATCAACAGTGGCTACTCTGTTTCAGGAGGTTTACATGGTGTTGGTTTATCTGTTGTTAACGCCTTGTCTGAGGCACTAGAGGTAACAGTATGGCGTGAAGGGCTGGAATACACACAAACATATTCTCGTGGGAAGCCGGTGACAACTCTGAACTGTGTCATGCTTCCTTTCGAAAATAAAGATCGCCAAGGAACACGTATCAAATTTTGGCCTGACAAAGAAGTATTCACCACCGCTATTGAATTTGAGTACAACACAATAGCTGGACGCATAAGGGAGTTGGCTTTCCTTAACCCAAAGCTTACGATTGCGCTTCGGAAAGAGGACAATGATCCAGAAAAGGTCCAATCTAATGAGTATTTCTATGCTGGGGGATTGGCTGAATATGTGCAATTTCTTAACACGGATAAGAAAGCTGTTCATGATGTTCTGAGTTTCAGAAAAGAAATAGATGGAATCACAGTTGATATAGCTTTGCAATGGTGTGAAGATGCATACTCCGATACAATACTAGGATATGCTAATAGTATACGCACTGTCGACGGTGGCACCCATATCGATGGTATGAAAGCTTCTTTAACAAGAACACTAAATAGTCTCGGAAAGAAATCAAAAGTTATCAAGGAAAAGGATATTACTCTAAGTGGAGAGCATGTGAGAGAAGGTTTAACATGTGTTGTCTCAGTCAAGGTCCCAAATCCAGAGTTTGAAGGACAAACAAAGACGAGGTTGGGAAATCCAGAGGTGCGGAAAGTGGTTGATCAATCTATTCAAGAATATCTTACCGAGTATTTGGAACTGCATCCAGATGTTCTTGATTCAGTGCTCTCTAAAGCTCTGAATGCTTTCAAGGCAGCTTTGGCTGCAAAAAGAGCAAGGGAATTGGTGAGACAAAAGAGTGTATTGAGATCTTCATCTCTTCCTGGCAAACTCGCGGATTGTTCATCATCAAATCCTGAAGACTGTGAAATTTTTATAGTTGAAGGTGATTCAGCTGGGGGAAGTGCTAAGCAAGGTCGTGATAGGCGCTTCCAGGCTATTCTCCCTTTGAGGGGTAAGATTCTGAACATTGAAAGGAGGGATGAAGCAGCAATGTACAAAAATGAAGAGATCCAAAATTTAATCCTTGGTCTTGGTCTCGGAGTGAAGGGAGAGGATTTTAAAAAGGATGCACTCCGTTATCACAAGATTATTATTTTGACCGATGCTGATGTCGATGGTGCCCATATTCGAACTCTGCTACTGACATTTTTCTATAGATATCAGAGAGCTTTGTTTGATGAAGGTTACATATACGTTGGTGTTCCACCACTTTACAAGGTTACAAGGGGAAAACAAGTGCACTATTGTTACGATGAAGCTGATCTTAAAAAACTTAAGAGCTCATTCGCCCCTAATGCATCATACAACATGCAAAGGTTCAAAGGGCTGGGAGAGATGATGCCTTTACAACTGTGGGAGACAACCATGGATCCAGAACAGAGGTTATTGAAGAAGTTGACGGTCGAAGATGCTGCCGAAGCAAATATTGTGTTTTCCTCCCTTATGGGTGCTCGGGTGGATGTTCGGAAGGAGTTGATACAAAATGCTGCAAACATGATTGATCTTGATCAGCTGGATATTTGA

Protein sequence

>Msa1419850

MAPVLLRRLPLLRFMASRTFFTPSSFRLHSSSSLPLSILSKPRKRFSLRKFSVPSLVSNGVTPRAYMSSLSAAEDIHKKDSSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPTTKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNPKLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKELIQNAANMIDLDQLDI*