Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772960 | XP_024639431.1 | 92.896 | 183 | 12 | 1 | 1 | 183 | 139 | 320 | 2.15e-92 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772960 | sp|Q8LGI2|SCPDL_ARATH | 43.719 | 199 | 72 | 3 | 182 | 341 | 225 | 422 | 3.92e-42 | 159 |
| Msa0772960 | sp|Q8LGI2|SCPDL_ARATH | 61.905 | 63 | 24 | 0 | 466 | 528 | 319 | 381 | 8.88e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772960 | A0A396HXP9 | 92.896 | 183 | 12 | 1 | 1 | 183 | 139 | 320 | 1.03e-92 | 296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0681250 | Msa0772960 | 0.804100 | 2.540094e-49 | -8.615850e-47 |
| Msa0731940 | Msa0772960 | 0.869784 | 2.388513e-66 | -8.615850e-47 |
| Msa0753720 | Msa0772960 | 0.803630 | 3.180426e-49 | -8.615850e-47 |
| Msa0772960 | Msa0810220 | 0.842584 | 2.365846e-58 | -8.615850e-47 |
| Msa0772960 | Msa0844490 | 0.810508 | 1.113222e-50 | -8.615850e-47 |
| Msa0772960 | Msa0892080 | 0.804775 | 1.837451e-49 | -8.615850e-47 |
| Msa0772960 | Msa0967580 | 0.815096 | 1.101349e-51 | -8.615850e-47 |
| Msa0772960 | Msa1121490 | 0.811053 | 8.486668e-51 | -8.615850e-47 |
| Msa0772960 | Msa1466540 | 0.802058 | 6.715726e-49 | -8.615850e-47 |
| Msa0285450 | Msa0772960 | 0.808809 | 2.580535e-50 | -8.615850e-47 |
| Msa0571010 | Msa0772960 | 0.816368 | 5.733407e-52 | -8.615850e-47 |
| Msa0571130 | Msa0772960 | 0.803670 | 3.120795e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772960 | MtrunA17_Chr5g0426721 | 92.896 | 183 | 12 | 1 | 1 | 183 | 139 | 320 | 1.98e-96 | 296 |
| Msa0772960 | MtrunA17_Chr5g0426721 | 78.378 | 37 | 8 | 0 | 381 | 417 | 115 | 151 | 8.74e-11 | 63.5 |
| Msa0772960 | MtrunA17_Chr4g0050551 | 59.091 | 198 | 41 | 2 | 183 | 341 | 223 | 419 | 1.56e-65 | 219 |
| Msa0772960 | MtrunA17_Chr4g0050551 | 38.150 | 173 | 52 | 3 | 411 | 528 | 206 | 378 | 4.74e-26 | 110 |
| Msa0772960 | MtrunA17_Chr7g0218121 | 51.562 | 192 | 53 | 3 | 189 | 341 | 104 | 294 | 5.25e-53 | 182 |
| Msa0772960 | MtrunA17_Chr7g0218121 | 65.217 | 69 | 24 | 0 | 460 | 528 | 185 | 253 | 2.15e-23 | 101 |
| Msa0772960 | MtrunA17_Chr5g0426661 | 89.655 | 116 | 12 | 0 | 68 | 183 | 46 | 161 | 1.24e-47 | 163 |
| Msa0772960 | MtrunA17_Chr3g0132461 | 48.869 | 221 | 76 | 2 | 5 | 190 | 129 | 347 | 6.77e-45 | 161 |
| Msa0772960 | MtrunA17_Chr5g0426671 | 78.947 | 76 | 15 | 1 | 183 | 258 | 18 | 92 | 1.09e-34 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772960 | AT5G39410.1 | 43.719 | 199 | 72 | 3 | 182 | 341 | 225 | 422 | 3.99e-43 | 159 |
| Msa0772960 | AT5G39410.1 | 61.905 | 63 | 24 | 0 | 466 | 528 | 319 | 381 | 9.03e-18 | 86.3 |
| Msa0772960 | AT4G09060.1 | 42.515 | 167 | 85 | 4 | 20 | 182 | 174 | 333 | 3.14e-19 | 89.7 |
| Msa0772960 | AT4G09060.2 | 42.515 | 167 | 85 | 4 | 20 | 182 | 200 | 359 | 4.21e-19 | 89.7 |
| Msa0772960 | AT1G14680.1 | 38.732 | 142 | 73 | 4 | 26 | 163 | 152 | 283 | 3.96e-15 | 76.6 |
Find 161 sgRNAs with CRISPR-Local
Find 753 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAATAACCGGACCGAAAA+TGG | 0.135273 | 5_2:+47466273 | Msa0772960:CDS |
| GACACCCGTTGGGTTAAATT+TGG | 0.185035 | 5_2:-47457269 | None:intergenic |
| TACCATAGGCTTTGCTCTTT+TGG | 0.201170 | 5_2:-47466945 | None:intergenic |
| TTGATGAAATCGTCGATTTC+CGG | 0.212466 | 5_2:-47457460 | None:intergenic |
| TCATTTAAGATGTGGTTTAT+TGG | 0.212988 | 5_2:+47466184 | Msa0772960:CDS |
| GTCTTCTACATATGAATTCT+TGG | 0.213648 | 5_2:+47460461 | Msa0772960:CDS |
| GACTAGTGCAGCTCATTATT+TGG | 0.246985 | 5_2:+47466479 | Msa0772960:intron |
| TATTACTTCATTTGTACTTT+AGG | 0.272074 | 5_2:-47468631 | None:intergenic |
| CCTTTGGTAAATTGTTTCTT+TGG | 0.273009 | 5_2:-47466348 | None:intergenic |
| TGTTGAGGAGAATCAGAAAT+TGG | 0.278657 | 5_2:+47457772 | Msa0772960:five_prime_UTR |
| GAAGCTTGATGTCGAGGGTT+TGG | 0.291158 | 5_2:-47457522 | None:intergenic |
| TGATGAAATCGTCGATTTCC+GGG | 0.296975 | 5_2:-47457459 | None:intergenic |
| TGTTCTATTATTTGTTCTTT+AGG | 0.311047 | 5_2:-47465812 | None:intergenic |
| ATAGAACACGAGAAGAAAAT+TGG | 0.317742 | 5_2:+47465827 | Msa0772960:CDS |
| AAGCTTGATGTCGAGGGTTT+GGG | 0.319462 | 5_2:-47457521 | None:intergenic |
| TACCTTGGCAGATGTACTAT+TGG | 0.320559 | 5_2:-47462785 | None:intergenic |
| CGAGCTACTTGTCTTTGAAT+TGG | 0.327323 | 5_2:-47462915 | None:intergenic |
| TGAAGAGTTGGAACGTGATT+TGG | 0.338671 | 5_2:+47466871 | Msa0772960:CDS |
| AAAAGGACAAAGAGCATCTA+AGG | 0.339255 | 5_2:+47462543 | Msa0772960:CDS |
| GAGTTTGCTTGACTCTCTTT+TGG | 0.341432 | 5_2:+47460416 | Msa0772960:CDS |
| TGAGGAGTTGGAACGTGATT+TGG | 0.358402 | 5_2:+47457931 | Msa0772960:five_prime_UTR |
| ACACCCGTTGGGTTAAATTT+GGG | 0.358866 | 5_2:-47457268 | None:intergenic |
| CAATCCATCGACCACTCTTT+AGG | 0.359406 | 5_2:+47457484 | Msa0772960:five_prime_UTR |
| GCATCATGTTTGTAGATTCC+AGG | 0.363616 | 5_2:+47465782 | Msa0772960:intron |
| TGATTTGGTTATGTATCAAT+TGG | 0.363755 | 5_2:+47457946 | Msa0772960:exon |
| ATCCCGAAACAGTTCCAAAA+AGG | 0.365143 | 5_2:+47465954 | Msa0772960:CDS |
| ATCTGTTGAAAATAGCATAT+TGG | 0.366775 | 5_2:+47462693 | Msa0772960:CDS |
| TCAGCAGATGCAACTGTTGT+TGG | 0.372056 | 5_2:+47465875 | Msa0772960:CDS |
| CGAGAAGAAAATTGGCCTTT+GGG | 0.374802 | 5_2:+47465835 | Msa0772960:CDS |
| ACGAGAAGAAAATTGGCCTT+TGG | 0.382134 | 5_2:+47465834 | Msa0772960:CDS |
| CTAGGTAGTTGCAGCGAAAA+TGG | 0.382765 | 5_2:+47468890 | Msa0772960:CDS |
| GTCGAGGGTTTGGGAGGAGA+TGG | 0.389737 | 5_2:-47457512 | None:intergenic |
| ATGAAAATTGAAAAGTAAAT+CGG | 0.391300 | 5_2:-47457399 | None:intergenic |
| CATACATGTTTGTAGATTCC+AGG | 0.394755 | 5_2:+47468601 | Msa0772960:intron |
| AAGAAGCCATCTTCCAAAAC+TGG | 0.397330 | 5_2:-47468843 | None:intergenic |
| CTCGTTATAACTACTATGTC+AGG | 0.398478 | 5_2:-47466253 | None:intergenic |
| GGGAAGAGACATGGTGGTGG+TGG | 0.398535 | 5_2:-47457436 | None:intergenic |
| GAAAGGAGTCATAGAGAATC+TGG | 0.400717 | 5_2:+47462751 | Msa0772960:CDS |
| AAGAGACATGGTGGTGGTGG+TGG | 0.403914 | 5_2:-47457433 | None:intergenic |
| GTTGGGGCATTGTAGAAAAC+TGG | 0.404992 | 5_2:+47457814 | Msa0772960:five_prime_UTR |
| TTTAGGTTCAAAATATTTGT+TGG | 0.405456 | 5_2:+47466010 | Msa0772960:CDS |
| GCGGAGTGTGAGAATCTGTT+GGG | 0.406528 | 5_2:+47457797 | Msa0772960:five_prime_UTR |
| CCTTGGATTGTTCGATGAGT+TGG | 0.415693 | 5_2:-47457617 | None:intergenic |
| TACTAAGGTTGACTCTTCTT+CGG | 0.416932 | 5_2:+47460374 | Msa0772960:intron |
| GTGCATGTTGGGAAGTCGTC+AGG | 0.434441 | 5_2:-47469010 | None:intergenic |
| AATGAGAGTCTTGCTGCAAA+TGG | 0.437219 | 5_2:+47468977 | Msa0772960:CDS |
| AGAATAACCGGACCGAAAAT+GGG | 0.442086 | 5_2:+47466274 | Msa0772960:CDS |
| TTAGGTTCAAAATATTTGTT+GGG | 0.442419 | 5_2:+47466011 | Msa0772960:CDS |
| TTATAGGTCATGTGCATGTT+GGG | 0.444290 | 5_2:-47469021 | None:intergenic |
| GTAGTTATAACGAGAATAAC+CGG | 0.453340 | 5_2:+47466262 | Msa0772960:CDS |
| TAACCCAAATTTAACCCAAC+GGG | 0.455495 | 5_2:+47457265 | Msa0772960:five_prime_UTR |
| TGAAAATAGCATATTGGAAA+AGG | 0.455763 | 5_2:+47462699 | Msa0772960:CDS |
| CTATTATTTGTTCTTTAGGA+AGG | 0.463358 | 5_2:-47465808 | None:intergenic |
| TTATGTAGTTTCGGCGAGAA+TGG | 0.467929 | 5_2:+47466133 | Msa0772960:intron |
| TCGAGGGTTTGGGAGGAGAT+GGG | 0.471014 | 5_2:-47457511 | None:intergenic |
| TCTTCTTCGGCAAGCACACA+TGG | 0.474846 | 5_2:+47460387 | Msa0772960:CDS |
| CTTTCCACTTCCTCTTCAGA+AGG | 0.476387 | 5_2:-47466157 | None:intergenic |
| TGAATTGATGTCTCTAGAAA+AGG | 0.480662 | 5_2:+47462526 | Msa0772960:CDS |
| CAAAGAAACAATTTACCAAA+GGG | 0.481582 | 5_2:+47466349 | Msa0772960:CDS |
| TCAATACCGATTCATTCTCT+TGG | 0.482581 | 5_2:-47457985 | None:intergenic |
| ATTATTTGTTCTTTAGGAAG+GGG | 0.487317 | 5_2:-47465806 | None:intergenic |
| TTGAAATCTCACGAGCCGTT+GGG | 0.488954 | 5_2:-47457301 | None:intergenic |
| GGCGGAGTGTGAGAATCTGT+TGG | 0.490375 | 5_2:+47457796 | Msa0772960:five_prime_UTR |
| CGGGATTCTCGTTCAACCCA+GGG | 0.490812 | 5_2:-47465937 | None:intergenic |
| AATGAGAGTCTTGCTGCAAA+TGG | 0.494589 | 5_2:+47466220 | Msa0772960:CDS |
| TCATTCAAGATATGGAGTAT+TGG | 0.500228 | 5_2:+47468941 | Msa0772960:CDS |
| TGGCCCTTCTGAAGAGGAAG+TGG | 0.502014 | 5_2:+47466153 | Msa0772960:CDS |
| TGGTCCTTCTGAAGAGGAAG+TGG | 0.502014 | 5_2:+47468910 | Msa0772960:CDS |
| TTCATTTGTACTTTAGGAAG+GGG | 0.502501 | 5_2:-47468625 | None:intergenic |
| ATTCCGTTCGAATTCTATAG+AGG | 0.504773 | 5_2:-47466506 | None:intergenic |
| AAGTAGCTCGATGGCGAAGA+AGG | 0.505159 | 5_2:+47462928 | Msa0772960:CDS |
| TGATTTGGTTATTCATCAGA+TGG | 0.506867 | 5_2:+47466886 | Msa0772960:CDS |
| ATTATAGGTCATGTGCATGT+TGG | 0.508942 | 5_2:-47469022 | None:intergenic |
| GGCGCGAAGCTTGATGTCGA+GGG | 0.510412 | 5_2:-47457527 | None:intergenic |
| TATCCATCAGTCTTTATCCT+AGG | 0.512644 | 5_2:+47468872 | Msa0772960:CDS |
| ACTTCATTTGTACTTTAGGA+AGG | 0.515758 | 5_2:-47468627 | None:intergenic |
| GAACATGCGAATGGTCTCCC+TGG | 0.516678 | 5_2:+47465920 | Msa0772960:CDS |
| TAGTGATGAAATACAAGGAA+AGG | 0.521881 | 5_2:+47462734 | Msa0772960:CDS |
| TATTATTTGTTCTTTAGGAA+GGG | 0.525991 | 5_2:-47465807 | None:intergenic |
| AAGATGTGGTTTATTGGACA+TGG | 0.528185 | 5_2:+47466190 | Msa0772960:CDS |
| CTTCATTTGTACTTTAGGAA+GGG | 0.529593 | 5_2:-47468626 | None:intergenic |
| ATTGAAATCTCACGAGCCGT+TGG | 0.534390 | 5_2:-47457302 | None:intergenic |
| CTAAAATGTACAGCCTTCAC+AGG | 0.537984 | 5_2:-47465992 | None:intergenic |
| TCGGGATTCTCGTTCAACCC+AGG | 0.539177 | 5_2:-47465938 | None:intergenic |
| ATGTACAGAGTTAGTTTGCA+AGG | 0.542833 | 5_2:-47462999 | None:intergenic |
| AACGTGCTTCATTCAAGATA+TGG | 0.548190 | 5_2:+47468933 | Msa0772960:CDS |
| TGTTCTTTAGGAAGGGGACC+TGG | 0.553586 | 5_2:-47465800 | None:intergenic |
| TGTACTTTAGGAAGGGGACC+TGG | 0.555048 | 5_2:-47468619 | None:intergenic |
| AGGCGCGAAGCTTGATGTCG+AGG | 0.555234 | 5_2:-47457528 | None:intergenic |
| GACCAAAAGAGCAAAGCCTA+TGG | 0.555419 | 5_2:+47466943 | Msa0772960:CDS |
| CGTTCCACTTCCTCTTCAGA+AGG | 0.557385 | 5_2:-47468914 | None:intergenic |
| CCAAAGAAACAATTTACCAA+AGG | 0.557590 | 5_2:+47466348 | Msa0772960:CDS |
| TAACCTCGACAGAGCTGAAG+AGG | 0.559410 | 5_2:+47462568 | Msa0772960:CDS |
| GGAGCGAAGCGTTCTGATCG+TGG | 0.562697 | 5_2:-47457573 | None:intergenic |
| AGCTGCTGTCAATGTGGAGC+GGG | 0.565123 | 5_2:+47460514 | Msa0772960:CDS |
| GGCGATAAAGAAATTTGTTG+AGG | 0.569108 | 5_2:+47457757 | Msa0772960:five_prime_UTR |
| GATGAAATCGTCGATTTCCG+GGG | 0.572577 | 5_2:-47457458 | None:intergenic |
| AGCTGAAGAACGAGCGAGGG+AGG | 0.574192 | 5_2:+47466835 | Msa0772960:CDS |
| CAAAGAAGTACAAGAGCACT+CGG | 0.574644 | 5_2:-47466325 | None:intergenic |
| AAAGTGCTTCATTTAAGATG+TGG | 0.575121 | 5_2:+47466176 | Msa0772960:CDS |
| TTAACCCAAATTTAACCCAA+CGG | 0.577630 | 5_2:+47457264 | Msa0772960:five_prime_UTR |
| AAGGGTGACAATCCTTGTCT+AGG | 0.578233 | 5_2:-47462980 | None:intergenic |
| GTTCAATCCGAGGAGACCAT+TGG | 0.578363 | 5_2:-47468751 | None:intergenic |
| GGTGGAAGTGAGAGCTGTAG+AGG | 0.580763 | 5_2:-47457378 | None:intergenic |
| AACATGCGAATGGTCTCCCT+GGG | 0.581277 | 5_2:+47465921 | Msa0772960:CDS |
| ATGTCGCCAAGAGAATGAAT+CGG | 0.582255 | 5_2:+47457979 | Msa0772960:CDS |
| CTACCTAGGATAAAGACTGA+TGG | 0.584172 | 5_2:-47468875 | None:intergenic |
| CTTGATGTCGAGGGTTTGGG+AGG | 0.585010 | 5_2:-47457518 | None:intergenic |
| CGAAAATGGTCCTTCTGAAG+AGG | 0.586259 | 5_2:+47468904 | Msa0772960:CDS |
| CGAGAATGGCCCTTCTGAAG+AGG | 0.588059 | 5_2:+47466147 | Msa0772960:CDS |
| TATTGGAAAAGGAGAACAGA+AGG | 0.588297 | 5_2:+47462710 | Msa0772960:CDS |
| AAGAAACAATTTACCAAAGG+GGG | 0.591306 | 5_2:+47466351 | Msa0772960:CDS |
| TGAAGCTGAAGAACGAGCGA+GGG | 0.591551 | 5_2:+47466832 | Msa0772960:CDS |
| TGGGATTCTCGTTCAATCCG+AGG | 0.591638 | 5_2:-47468761 | None:intergenic |
| AAAATTGAAAAGTAAATCGG+TGG | 0.591856 | 5_2:-47457396 | None:intergenic |
| GTGTTTGCGAGCTGAGGAGT+TGG | 0.593637 | 5_2:+47457919 | Msa0772960:five_prime_UTR |
| TTGTTTGCGAGCTGAAGAGT+TGG | 0.596147 | 5_2:+47466859 | Msa0772960:CDS |
| GAGAAGAAAATTGGCCTTTG+GGG | 0.597698 | 5_2:+47465836 | Msa0772960:CDS |
| TTTCCACTTCCTCTTCAGAA+GGG | 0.598633 | 5_2:-47466156 | None:intergenic |
| CTTCTTCGGCAAGCACACAT+GGG | 0.598949 | 5_2:+47460388 | Msa0772960:CDS |
| ATGAAGCTGAAGAACGAGCG+AGG | 0.599961 | 5_2:+47466831 | Msa0772960:CDS |
| TTGGGACCAAATACAACACA+TGG | 0.601705 | 5_2:-47466384 | None:intergenic |
| TTTCTAACAGAACACGCCAA+TGG | 0.603227 | 5_2:+47468735 | Msa0772960:intron |
| TGAAGCTGAAGAACAAGCGA+GGG | 0.604182 | 5_2:+47457892 | Msa0772960:five_prime_UTR |
| GAACACGCCAATGGTCTCCT+CGG | 0.607416 | 5_2:+47468744 | Msa0772960:intron |
| CCAACTCATCGAACAATCCA+AGG | 0.607467 | 5_2:+47457617 | Msa0772960:five_prime_UTR |
| CCTCGACAGAGCTGAAGAGG+AGG | 0.608059 | 5_2:+47462571 | Msa0772960:CDS |
| TACCAATAGTACATCTGCCA+AGG | 0.612710 | 5_2:+47462783 | Msa0772960:CDS |
| ATTCTAACAGAACATGCGAA+TGG | 0.616870 | 5_2:+47465911 | Msa0772960:CDS |
| TGTACAGAGTTAGTTTGCAA+GGG | 0.618751 | 5_2:-47462998 | None:intergenic |
| AGCTGAAGAACAAGCGAGGG+AGG | 0.619895 | 5_2:+47457895 | Msa0772960:five_prime_UTR |
| AAGATATGGAGTATTGGACA+TGG | 0.620132 | 5_2:+47468947 | Msa0772960:CDS |
| CCTCCTCTTCAGCTCTGTCG+AGG | 0.622887 | 5_2:-47462571 | None:intergenic |
| TTCAAAGACAAGTAGCTCGA+TGG | 0.623390 | 5_2:+47462919 | Msa0772960:CDS |
| GCATTGTAGAAAACTGGAGA+AGG | 0.625925 | 5_2:+47457820 | Msa0772960:five_prime_UTR |
| GGAGAATCAGAAATTGGCGG+CGG | 0.627151 | 5_2:+47457778 | Msa0772960:five_prime_UTR |
| TGAGGAGAATCAGAAATTGG+CGG | 0.627278 | 5_2:+47457775 | Msa0772960:five_prime_UTR |
| ATTGAAGAGATGCGATGCGA+TGG | 0.632923 | 5_2:-47457346 | None:intergenic |
| GGAGGCGTGTTTGCGAGCTG+AGG | 0.637109 | 5_2:+47457913 | Msa0772960:five_prime_UTR |
| TTCTTCGGCAAGCACACATG+GGG | 0.638857 | 5_2:+47460389 | Msa0772960:CDS |
| AATGGGTTATGTAACGACAC+TGG | 0.639564 | 5_2:+47466291 | Msa0772960:CDS |
| ATGAAATCGTCGATTTCCGG+GGG | 0.641409 | 5_2:-47457457 | None:intergenic |
| CGGAGTGTGAGAATCTGTTG+GGG | 0.643108 | 5_2:+47457798 | Msa0772960:five_prime_UTR |
| AAGACCTAAAGAGTGGTCGA+TGG | 0.643999 | 5_2:-47457488 | None:intergenic |
| GATTCAGTATCACCTAGACA+AGG | 0.646511 | 5_2:+47462968 | Msa0772960:CDS |
| ATGAAGCTGAAGAACAAGCG+AGG | 0.647436 | 5_2:+47457891 | Msa0772960:five_prime_UTR |
| GTGGAAGTGAGAGCTGTAGA+GGG | 0.648569 | 5_2:-47457377 | None:intergenic |
| TCACCTCTATAGAATTCGAA+CGG | 0.652072 | 5_2:+47466503 | Msa0772960:CDS |
| GTAGTGTTGTTATTCCCCAA+AGG | 0.653457 | 5_2:-47465850 | None:intergenic |
| AAGGTTAGTGATGAAATACA+AGG | 0.658115 | 5_2:+47462729 | Msa0772960:CDS |
| GTAGCTTAAAGCAATCAACT+CGG | 0.659694 | 5_2:+47462483 | Msa0772960:intron |
| AAAGAAACAATTTACCAAAG+GGG | 0.662976 | 5_2:+47466350 | Msa0772960:CDS |
| GGAGTGAAGTGTTCTGATCG+TGG | 0.667998 | 5_2:-47466531 | None:intergenic |
| AGATGGGAAGACCTAAAGAG+TGG | 0.668747 | 5_2:-47457495 | None:intergenic |
| TGAAGCGTGTGTGAATGCGC+TGG | 0.669437 | 5_2:+47457736 | Msa0772960:five_prime_UTR |
| GGAGTCATAGAGAATCTGGT+GGG | 0.674277 | 5_2:+47462755 | Msa0772960:CDS |
| AGAAACAATTTACCAAAGGG+GGG | 0.680233 | 5_2:+47466352 | Msa0772960:CDS |
| AGGAGTCATAGAGAATCTGG+TGG | 0.681121 | 5_2:+47462754 | Msa0772960:CDS |
| ATTGAACGAGAATCCCAAGA+CGG | 0.724950 | 5_2:+47468767 | Msa0772960:CDS |
| AAGCTGCTGTCAATGTGGAG+CGG | 0.726336 | 5_2:+47460513 | Msa0772960:CDS |
| TGAAATCGTCGATTTCCGGG+GGG | 0.769172 | 5_2:-47457456 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATAGCAATAATTA+TGG | - | chr5_2:47457658-47457677 | None:intergenic | 10.0% |
| !!! | TAATTTTCTTAAATTACTAT+TGG | + | chr5_2:47458327-47458346 | Msa0772960:intron | 10.0% |
| !! | AAAACTTAAAAATATAGTAA+AGG | - | chr5_2:47458646-47458665 | None:intergenic | 10.0% |
| !!! | ATATTTACTTTATTTTACTA+AGG | + | chr5_2:47460359-47460378 | Msa0772960:intron | 10.0% |
| !! | AAAAGAATAATGTAAAAATA+AGG | - | chr5_2:47460584-47460603 | None:intergenic | 10.0% |
| !! | ATGCAAATTAATTATTTAAA+AGG | - | chr5_2:47462872-47462891 | None:intergenic | 10.0% |
| !!! | AAGATAAATTCAATTTTAAA+CGG | - | chr5_2:47463670-47463689 | None:intergenic | 10.0% |
| !! | TTTCAGTAAAAAAAAAAAAA+TGG | + | chr5_2:47464351-47464370 | Msa0772960:intron | 10.0% |
| !! | ATGAAAATTGAAAAGTAAAT+CGG | - | chr5_2:47457402-47457421 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTAAGTTTTTGA+AGG | - | chr5_2:47457597-47457616 | None:intergenic | 15.0% |
| !!! | ATATTTTTGATTTTCTTCTT+TGG | + | chr5_2:47457700-47457719 | Msa0772960:intron | 15.0% |
| !! | CAAAAATCTATTAAAAGATA+GGG | - | chr5_2:47458479-47458498 | None:intergenic | 15.0% |
| !! | ACAAAAATCTATTAAAAGAT+AGG | - | chr5_2:47458480-47458499 | None:intergenic | 15.0% |
| !! | TGTATAAAAATAAGTTGTTT+AGG | + | chr5_2:47458509-47458528 | Msa0772960:intron | 15.0% |
| !! | GTATAAAAATAAGTTGTTTA+GGG | + | chr5_2:47458510-47458529 | Msa0772960:intron | 15.0% |
| !! | TTAGTAAGAAATTGATTAAA+TGG | + | chr5_2:47458887-47458906 | Msa0772960:intron | 15.0% |
| !! | TATATTCTAATAATACTTGT+AGG | + | chr5_2:47458994-47459013 | Msa0772960:intron | 15.0% |
| !!! | AACTTTTTTTCGAAAAATAA+AGG | - | chr5_2:47459176-47459195 | None:intergenic | 15.0% |
| !! | TTAGTAAGAAATTGATTAAA+TGG | + | chr5_2:47458887-47458906 | Msa0772960:intron | 15.0% |
| !! | TATATTCTAATAATACTTGT+AGG | + | chr5_2:47458994-47459013 | Msa0772960:intron | 15.0% |
| !!! | AACTTTTTTTCGAAAAATAA+AGG | - | chr5_2:47459176-47459195 | None:intergenic | 15.0% |
| !! | CAAATTAATTATTTAAAAGG+AGG | - | chr5_2:47462869-47462888 | None:intergenic | 15.0% |
| !!! | ATTAATTTTTCAAAAGAAAG+AGG | + | chr5_2:47463238-47463257 | Msa0772960:intron | 15.0% |
| !!! | CAATAATTCGATAATTTTAA+GGG | - | chr5_2:47463273-47463292 | None:intergenic | 15.0% |
| !!! | TCAATAATTCGATAATTTTA+AGG | - | chr5_2:47463274-47463293 | None:intergenic | 15.0% |
| !!! | TTGTCATGTAATTTATTTTT+TGG | + | chr5_2:47463356-47463375 | Msa0772960:intron | 15.0% |
| !! | TTATAGAAAATTATTAAAGG+TGG | + | chr5_2:47463615-47463634 | Msa0772960:intron | 15.0% |
| !!! | TCATTTATATTCAATCTTTT+CGG | + | chr5_2:47464186-47464205 | Msa0772960:intron | 15.0% |
| !! | AAAAAAAAAAAATGGTTCTT+TGG | + | chr5_2:47464359-47464378 | Msa0772960:intron | 15.0% |
| !! | AATATTTGTAGAGATATTTA+AGG | + | chr5_2:47464872-47464891 | Msa0772960:intron | 15.0% |
| !!! | CAATATTTTAACATTCAAAA+TGG | - | chr5_2:47465658-47465677 | None:intergenic | 15.0% |
| !! | AAACAAAAATATATTACACA+AGG | - | chr5_2:47465745-47465764 | None:intergenic | 15.0% |
| !!! | TAACATTTTGATAATGTTAT+TGG | + | chr5_2:47468150-47468169 | Msa0772960:intron | 15.0% |
| !! | AAAATAAAGTCAATTATACA+AGG | - | chr5_2:47468516-47468535 | None:intergenic | 15.0% |
| !! | ATAATAGCAATAATTATGGA+GGG | - | chr5_2:47457654-47457673 | None:intergenic | 20.0% |
| !! | AATAATAGCAATAATTATGG+AGG | - | chr5_2:47457655-47457674 | None:intergenic | 20.0% |
| !! | ACTTAAAAATATAGTAAAGG+AGG | - | chr5_2:47458643-47458662 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTTTTCCCATAT+TGG | + | chr5_2:47458653-47458672 | Msa0772960:intron | 20.0% |
| !!! | TTTTTAAGTTTTCCCATATT+GGG | + | chr5_2:47458654-47458673 | Msa0772960:intron | 20.0% |
| !! | ATATAAAAATATTCAGCATG+AGG | - | chr5_2:47458979-47458998 | None:intergenic | 20.0% |
| !!! | TAATTTTTCCTCTTAATTGA+TGG | + | chr5_2:47459147-47459166 | Msa0772960:intron | 20.0% |
| !!! | AGTATTTGGAATTTCATTTT+CGG | + | chr5_2:47459229-47459248 | Msa0772960:intron | 20.0% |
| !! | ATATAAAAATATTCAGCATG+AGG | - | chr5_2:47458979-47458998 | None:intergenic | 20.0% |
| !!! | TAATTTTTCCTCTTAATTGA+TGG | + | chr5_2:47459147-47459166 | Msa0772960:intron | 20.0% |
| !!! | AGTATTTGGAATTTCATTTT+CGG | + | chr5_2:47459229-47459248 | Msa0772960:intron | 20.0% |
| !! | AAGCGAAATTATTAAAATAC+TGG | - | chr5_2:47460048-47460067 | None:intergenic | 20.0% |
| !!! | TATTTTCTTTGTAAGAGAAA+AGG | - | chr5_2:47461045-47461064 | None:intergenic | 20.0% |
| !! | ATCCTTAATGTATTTAGATT+GGG | + | chr5_2:47461686-47461705 | Msa0772960:intron | 20.0% |
| !! | TTTAGTATGTAAAACAATGA+AGG | + | chr5_2:47461889-47461908 | Msa0772960:intron | 20.0% |
| !! | CAAAATCCAAATGATAATTA+GGG | - | chr5_2:47462464-47462483 | None:intergenic | 20.0% |
| !! | ACAAAATCCAAATGATAATT+AGG | - | chr5_2:47462465-47462484 | None:intergenic | 20.0% |
| !!! | TTTCAGTTTTTGGATTATAA+TGG | + | chr5_2:47462628-47462647 | Msa0772960:intron | 20.0% |
| !!! | CTGTTCAGTTTTATTTAATT+TGG | + | chr5_2:47462841-47462860 | Msa0772960:intron | 20.0% |
| !!! | GTGTTAATTTTTTAATCCTT+AGG | + | chr5_2:47463378-47463397 | Msa0772960:intron | 20.0% |
| !!! | TTTTTTAATCCTTAGGAAAA+AGG | + | chr5_2:47463385-47463404 | Msa0772960:intron | 20.0% |
| !! | CTAACATTTAGTTAAAAAAG+AGG | + | chr5_2:47463774-47463793 | Msa0772960:intron | 20.0% |
| !!! | GGATTGAATTTTATCATTTT+GGG | - | chr5_2:47464019-47464038 | None:intergenic | 20.0% |
| !!! | TGGATTGAATTTTATCATTT+TGG | - | chr5_2:47464020-47464039 | None:intergenic | 20.0% |
| !! | TCACAAACGTATTTATTTAT+TGG | - | chr5_2:47464040-47464059 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTACTGAAAGTG+AGG | - | chr5_2:47464348-47464367 | None:intergenic | 20.0% |
| !!! | TTTGAGATTGAACAAATTAA+AGG | + | chr5_2:47464555-47464574 | Msa0772960:intron | 20.0% |
| !! | TTGAGATTGAACAAATTAAA+GGG | + | chr5_2:47464556-47464575 | Msa0772960:intron | 20.0% |
| !! | TATTTAAGGACATATTAATG+TGG | + | chr5_2:47464886-47464905 | Msa0772960:intron | 20.0% |
| !! | TAAGCAATCAGAAATTATAA+AGG | + | chr5_2:47465104-47465123 | Msa0772960:intron | 20.0% |
| !! | AAGCAATCAGAAATTATAAA+GGG | + | chr5_2:47465105-47465124 | Msa0772960:intron | 20.0% |
| !!! | ATACCTTATAATTGCTTTTA+GGG | - | chr5_2:47465193-47465212 | None:intergenic | 20.0% |
| !! | GGTATGATATATCAAAATAA+TGG | + | chr5_2:47465208-47465227 | Msa0772960:intron | 20.0% |
| !! | AATATAAAGTCAATTACACA+AGG | - | chr5_2:47465586-47465605 | None:intergenic | 20.0% |
| !!! | AATATTGAATCCTCTTTTAA+TGG | + | chr5_2:47465671-47465690 | Msa0772960:intron | 20.0% |
| !!! | TATTATTTGTTCTTTAGGAA+GGG | - | chr5_2:47465810-47465829 | None:intergenic | 20.0% |
| !! | TGTTCTATTATTTGTTCTTT+AGG | - | chr5_2:47465815-47465834 | None:intergenic | 20.0% |
| !!! | TTCCAAAAAGGAAAAAATTT+TGG | + | chr5_2:47465966-47465985 | Msa0772960:CDS | 20.0% |
| !!! | TTTAGGTTCAAAATATTTGT+TGG | + | chr5_2:47466010-47466029 | Msa0772960:CDS | 20.0% |
| !! | TTAGGTTCAAAATATTTGTT+GGG | + | chr5_2:47466011-47466030 | Msa0772960:CDS | 20.0% |
| !!! | AAATATTTGTTGGGTATTTT+AGG | + | chr5_2:47466020-47466039 | Msa0772960:intron | 20.0% |
| !! | AAAAACTCATGAACAATTTA+AGG | + | chr5_2:47466575-47466594 | Msa0772960:CDS | 20.0% |
| !! | AATTATTGAAGAAAAATCGA+AGG | - | chr5_2:47466613-47466632 | None:intergenic | 20.0% |
| !! | TAATATTGAATTCATACCAT+AGG | - | chr5_2:47466962-47466981 | None:intergenic | 20.0% |
| !! | CAATATTTGTAGAGATATTT+AGG | + | chr5_2:47467202-47467221 | Msa0772960:intron | 20.0% |
| !! | TATTTAGGAACATAATAAAG+TGG | + | chr5_2:47467217-47467236 | Msa0772960:intron | 20.0% |
| !! | TAATTGTTGTAACTGTTAAT+CGG | - | chr5_2:47467293-47467312 | None:intergenic | 20.0% |
| !! | TAAGCAATCAGAAATTATAA+AGG | + | chr5_2:47465104-47465123 | Msa0772960:intron | 20.0% |
| !! | AAGCAATCAGAAATTATAAA+GGG | + | chr5_2:47465105-47465124 | Msa0772960:intron | 20.0% |
| !! | AGACAATTATAAATAGAATG+TGG | + | chr5_2:47467605-47467624 | Msa0772960:intron | 20.0% |
| !! | ACTTTAACTAATGTAATCTT+TGG | + | chr5_2:47468127-47468146 | Msa0772960:intron | 20.0% |
| !! | TCAATGATTAATATTTGTCA+AGG | + | chr5_2:47468195-47468214 | Msa0772960:intron | 20.0% |
| !! | ATATTAATCATTGACAAAGT+CGG | - | chr5_2:47468189-47468208 | None:intergenic | 20.0% |
| !! | ATGATTAATCAACATTAAGT+TGG | - | chr5_2:47468327-47468346 | None:intergenic | 20.0% |
| !! | TATTACTTCATTTGTACTTT+AGG | - | chr5_2:47468634-47468653 | None:intergenic | 20.0% |
| !!! | CAAAAATGTTTTTCTAACAA+CGG | - | chr5_2:47468715-47468734 | None:intergenic | 20.0% |
| !!! | TTCAAAAAAGGAAAGTTTTT+TGG | + | chr5_2:47468790-47468809 | Msa0772960:CDS | 20.0% |
| ! | AAAATTGAAAAGTAAATCGG+TGG | - | chr5_2:47457399-47457418 | None:intergenic | 25.0% |
| !!! | TGATTTTCTTCTTTGGTTTT+TGG | + | chr5_2:47457707-47457726 | Msa0772960:intron | 25.0% |
| !!! | TGATTTGGTTATGTATCAAT+TGG | + | chr5_2:47457946-47457965 | Msa0772960:exon | 25.0% |
| !! | TTGTTTAGGGTTATTTCATT+TGG | + | chr5_2:47458523-47458542 | Msa0772960:intron | 25.0% |
| !! | TGTTTAGGGTTATTTCATTT+GGG | + | chr5_2:47458524-47458543 | Msa0772960:intron | 25.0% |
| !! | AAATATAGTAAAGGAGGTTT+TGG | - | chr5_2:47458637-47458656 | None:intergenic | 25.0% |
| !! | GAGTTTTCGATATTTATACA+TGG | + | chr5_2:47458676-47458695 | Msa0772960:intron | 25.0% |
| !! | TTTTCGATATTTATACATGG+TGG | + | chr5_2:47458679-47458698 | Msa0772960:intron | 25.0% |
| ! | TTTCGATATTTATACATGGT+GGG | + | chr5_2:47458680-47458699 | Msa0772960:intron | 25.0% |
| ! | TAAGCATGTTATCGTTATTA+GGG | - | chr5_2:47459031-47459050 | None:intergenic | 25.0% |
| ! | TAAGCATGTTATCGTTATTA+GGG | - | chr5_2:47459031-47459050 | None:intergenic | 25.0% |
| ! | TAAGCATGTATACTTAAGAA+TGG | - | chr5_2:47460003-47460022 | None:intergenic | 25.0% |
| ! | AATTAGATTAAGCAGTATGT+TGG | - | chr5_2:47460105-47460124 | None:intergenic | 25.0% |
| ! | ACATACTGCTTAATCTAATT+TGG | + | chr5_2:47460105-47460124 | Msa0772960:intron | 25.0% |
| ! | ATTTCGAAATTAGAGAGAAA+GGG | - | chr5_2:47460284-47460303 | None:intergenic | 25.0% |
| ! | TATTTCGAAATTAGAGAGAA+AGG | - | chr5_2:47460285-47460304 | None:intergenic | 25.0% |
| ! | TTCTCTCTAATTTCGAAATA+TGG | + | chr5_2:47460285-47460304 | Msa0772960:intron | 25.0% |
| ! | TTTCACAAGTGTTAATCATT+TGG | + | chr5_2:47460317-47460336 | Msa0772960:intron | 25.0% |
| ! | TAATTCAAGAACAAAACACA+TGG | - | chr5_2:47461075-47461094 | None:intergenic | 25.0% |
| ! | TTTGTTCTTGAATTAAGAAC+AGG | + | chr5_2:47461080-47461099 | Msa0772960:intron | 25.0% |
| ! | TTGTTCTTGAATTAAGAACA+GGG | + | chr5_2:47461081-47461100 | Msa0772960:intron | 25.0% |
| !!! | TATATTTTTGGGTCCTAATT+TGG | - | chr5_2:47461291-47461310 | None:intergenic | 25.0% |
| ! | TATGATCAATGCAAATAGTA+TGG | - | chr5_2:47461649-47461668 | None:intergenic | 25.0% |
| !! | ACTATTTGCATTGATCATAT+TGG | + | chr5_2:47461650-47461669 | Msa0772960:intron | 25.0% |
| ! | GATCCTTAATGTATTTAGAT+TGG | + | chr5_2:47461685-47461704 | Msa0772960:intron | 25.0% |
| ! | ATCCCAATCTAAATACATTA+AGG | - | chr5_2:47461691-47461710 | None:intergenic | 25.0% |
| ! | ATTTAGATTGGGATAAAAGT+AGG | + | chr5_2:47461697-47461716 | Msa0772960:intron | 25.0% |
| ! | TTTAGATTGGGATAAAAGTA+GGG | + | chr5_2:47461698-47461717 | Msa0772960:intron | 25.0% |
| !! | ATTTAGTGGATAGCATAATT+CGG | - | chr5_2:47462331-47462350 | None:intergenic | 25.0% |
| ! | TTAGAACCCTAATTATCATT+TGG | + | chr5_2:47462455-47462474 | Msa0772960:intron | 25.0% |
| ! | AAAAAAGTCGACAATATAAG+GGG | - | chr5_2:47462611-47462630 | None:intergenic | 25.0% |
| ! | GAAAAAAGTCGACAATATAA+GGG | - | chr5_2:47462612-47462631 | None:intergenic | 25.0% |
| ! | TGAAAAAAGTCGACAATATA+AGG | - | chr5_2:47462613-47462632 | None:intergenic | 25.0% |
| ! | ATCTGTTGAAAATAGCATAT+TGG | + | chr5_2:47462693-47462712 | Msa0772960:CDS | 25.0% |
| ! | TGAAAATAGCATATTGGAAA+AGG | + | chr5_2:47462699-47462718 | Msa0772960:CDS | 25.0% |
| ! | TTAAGAATCAAAACCAACTT+CGG | - | chr5_2:47463135-47463154 | None:intergenic | 25.0% |
| ! | TTAAAACCATGAAAAAACAG+AGG | + | chr5_2:47463151-47463170 | Msa0772960:intron | 25.0% |
| ! | TAAAACCATGAAAAAACAGA+GGG | + | chr5_2:47463152-47463171 | Msa0772960:intron | 25.0% |
| !!! | TTCGATAATTTTAAGGGTAA+TGG | - | chr5_2:47463267-47463286 | None:intergenic | 25.0% |
| ! | CTTACATTCTGAATTACTAT+GGG | - | chr5_2:47463413-47463432 | None:intergenic | 25.0% |
| ! | ACTTACATTCTGAATTACTA+TGG | - | chr5_2:47463414-47463433 | None:intergenic | 25.0% |
| ! | TAAGTAAAGTTTAACCAAGA+TGG | + | chr5_2:47463429-47463448 | Msa0772960:intron | 25.0% |
| !!! | TTGCTGATGATTTTAATAGA+CGG | + | chr5_2:47463530-47463549 | Msa0772960:intron | 25.0% |
| ! | CTATTGTATTCTCAATTTCT+AGG | - | chr5_2:47463862-47463881 | None:intergenic | 25.0% |
| ! | ATTGATCATCACTTGTATAA+CGG | - | chr5_2:47463921-47463940 | None:intergenic | 25.0% |
| !! | AATCTTTTCGGATATTCATT+TGG | + | chr5_2:47464198-47464217 | Msa0772960:intron | 25.0% |
| ! | ATCAGTAGAAACAAAAACAT+TGG | + | chr5_2:47464284-47464303 | Msa0772960:intron | 25.0% |
| !! | GTAGGTAATTTTTGTACTTT+TGG | + | chr5_2:47464478-47464497 | Msa0772960:intron | 25.0% |
| ! | TGAGATTGAACAAATTAAAG+GGG | + | chr5_2:47464557-47464576 | Msa0772960:intron | 25.0% |
| ! | ACTGAATTGAATTTAGTGTA+AGG | + | chr5_2:47464770-47464789 | Msa0772960:intron | 25.0% |
| ! | ATACCCTAAAAGCAATTATA+AGG | + | chr5_2:47465187-47465206 | Msa0772960:intron | 25.0% |
| !!! | CATACCTTATAATTGCTTTT+AGG | - | chr5_2:47465194-47465213 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAACATCACAA+TGG | + | chr5_2:47465231-47465250 | Msa0772960:intron | 25.0% |
| ! | AGACGATTATAAATAGATTG+TGG | + | chr5_2:47465263-47465282 | Msa0772960:intron | 25.0% |
| !! | AACTAGAGAGAATATTGTTT+TGG | + | chr5_2:47465297-47465316 | Msa0772960:intron | 25.0% |
| !!! | AGCTTTGTTAGTTTAAATGA+TGG | + | chr5_2:47465334-47465353 | Msa0772960:intron | 25.0% |
| ! | GCTATTGGGAATTATTATTA+GGG | - | chr5_2:47465470-47465489 | None:intergenic | 25.0% |
| ! | AGCTATTGGGAATTATTATT+AGG | - | chr5_2:47465471-47465490 | None:intergenic | 25.0% |
| ! | AATAATAATTCCCAATAGCT+TGG | + | chr5_2:47465471-47465490 | Msa0772960:intron | 25.0% |
| ! | TTTCATCTGCAATTGAATTT+AGG | + | chr5_2:47465632-47465651 | Msa0772960:intron | 25.0% |
| !! | ATTATTTGTTCTTTAGGAAG+GGG | - | chr5_2:47465809-47465828 | None:intergenic | 25.0% |
| !! | CTATTATTTGTTCTTTAGGA+AGG | - | chr5_2:47465811-47465830 | None:intergenic | 25.0% |
| !!! | GACCAAAATTTTTTCCTTTT+TGG | - | chr5_2:47465971-47465990 | None:intergenic | 25.0% |
| !! | ATTACATTTGGAATAATCCT+AGG | + | chr5_2:47466043-47466062 | Msa0772960:intron | 25.0% |
| ! | ATCTTTACCTTATGTAGTTT+CGG | + | chr5_2:47466124-47466143 | Msa0772960:intron | 25.0% |
| !! | TCATTTAAGATGTGGTTTAT+TGG | + | chr5_2:47466184-47466203 | Msa0772960:CDS | 25.0% |
| ! | CAAAGAAACAATTTACCAAA+GGG | + | chr5_2:47466349-47466368 | Msa0772960:CDS | 25.0% |
| ! | AAAGAAACAATTTACCAAAG+GGG | + | chr5_2:47466350-47466369 | Msa0772960:CDS | 25.0% |
| ! | CAATAAAGACTTCAACAAAA+TGG | + | chr5_2:47466414-47466433 | Msa0772960:intron | 25.0% |
| ! | ACATTATCGAAATTTGGAAA+AGG | + | chr5_2:47466760-47466779 | Msa0772960:intron | 25.0% |
| ! | AAATTCAATTCAGTAAACCT+TGG | - | chr5_2:47464764-47464783 | None:intergenic | 25.0% |
| ! | ACTGAATTGAATTTAGTGTA+AGG | + | chr5_2:47464770-47464789 | Msa0772960:intron | 25.0% |
| ! | AGAATGAGCAATTCTTAAAT+AGG | + | chr5_2:47467411-47467430 | Msa0772960:intron | 25.0% |
| !! | ATAACTTTTTATTGCTTCGA+AGG | - | chr5_2:47467537-47467556 | None:intergenic | 25.0% |
| ! | GAAAAAAAACATCACAATGA+CGG | + | chr5_2:47467576-47467595 | Msa0772960:intron | 25.0% |
| !! | ACTAGAGAGAATATTGTTTT+TGG | + | chr5_2:47465298-47465317 | Msa0772960:intron | 25.0% |
| ! | TATATTCATCTGCAAATTGT+TGG | + | chr5_2:47468026-47468045 | Msa0772960:intron | 25.0% |
| ! | GAATCTTAAAAACAAACACA+CGG | + | chr5_2:47468426-47468445 | Msa0772960:intron | 25.0% |
| TTAACCCAAATTTAACCCAA+CGG | + | chr5_2:47457264-47457283 | Msa0772960:five_prime_UTR | 30.0% | |
| ATACATACCCTAAATCCTAA+TGG | + | chr5_2:47458188-47458207 | Msa0772960:intron | 30.0% | |
| ACATACACCATTAGGATTTA+GGG | - | chr5_2:47458198-47458217 | None:intergenic | 30.0% | |
| TACATACACCATTAGGATTT+AGG | - | chr5_2:47458199-47458218 | None:intergenic | 30.0% | |
| AAAGAACTACATACACCATT+AGG | - | chr5_2:47458206-47458225 | None:intergenic | 30.0% | |
| TGTATCTCACACAAAAGATA+GGG | - | chr5_2:47458391-47458410 | None:intergenic | 30.0% | |
| TTGTATCTCACACAAAAGAT+AGG | - | chr5_2:47458392-47458411 | None:intergenic | 30.0% | |
| ! | ATTTGGGATATTGTTTAGTG+AGG | + | chr5_2:47458540-47458559 | Msa0772960:intron | 30.0% |
| ! | TTTGGGATATTGTTTAGTGA+GGG | + | chr5_2:47458541-47458560 | Msa0772960:intron | 30.0% |
| TACCAAACCTTTACTTGTTT+GGG | + | chr5_2:47458586-47458605 | Msa0772960:intron | 30.0% | |
| CTAATATCCCAAACAAGTAA+AGG | - | chr5_2:47458596-47458615 | None:intergenic | 30.0% | |
| ATATCGAAAACTCCCAATAT+GGG | - | chr5_2:47458669-47458688 | None:intergenic | 30.0% | |
| AATATCGAAAACTCCCAATA+TGG | - | chr5_2:47458670-47458689 | None:intergenic | 30.0% | |
| AAGGATGGAAAGAAAAAGAA+GGG | - | chr5_2:47458716-47458735 | None:intergenic | 30.0% | |
| TGACTGAGTAATTTAATTGC+TGG | + | chr5_2:47458919-47458938 | Msa0772960:intron | 30.0% | |
| GACTGAGTAATTTAATTGCT+GGG | + | chr5_2:47458920-47458939 | Msa0772960:intron | 30.0% | |
| CTAAGCATGTTATCGTTATT+AGG | - | chr5_2:47459032-47459051 | None:intergenic | 30.0% | |
| AAATTCCAAATACTCAGTGA+TGG | - | chr5_2:47459223-47459242 | None:intergenic | 30.0% | |
| ! | TTTTACCTGAAAGTCATATG+AGG | + | chr5_2:47459263-47459282 | Msa0772960:intron | 30.0% |
| TGACTGAGTAATTTAATTGC+TGG | + | chr5_2:47458919-47458938 | Msa0772960:intron | 30.0% | |
| GACTGAGTAATTTAATTGCT+GGG | + | chr5_2:47458920-47458939 | Msa0772960:intron | 30.0% | |
| CTAAGCATGTTATCGTTATT+AGG | - | chr5_2:47459032-47459051 | None:intergenic | 30.0% | |
| AAATTCCAAATACTCAGTGA+TGG | - | chr5_2:47459223-47459242 | None:intergenic | 30.0% | |
| ! | TTTTACCTGAAAGTCATATG+AGG | + | chr5_2:47459263-47459282 | Msa0772960:intron | 30.0% |
| CATGTATACTTAAGAATGGT+GGG | - | chr5_2:47459999-47460018 | None:intergenic | 30.0% | |
| TGCTTACCCTCATTTAAATT+TGG | + | chr5_2:47460017-47460036 | Msa0772960:intron | 30.0% | |
| GCAAGTCCAAATTTAAATGA+GGG | - | chr5_2:47460026-47460045 | None:intergenic | 30.0% | |
| ACTACTACTACTACTAGAAT+AGG | + | chr5_2:47460228-47460247 | Msa0772960:intron | 30.0% | |
| TCTAATTTCGAAATATGGCT+AGG | + | chr5_2:47460290-47460309 | Msa0772960:intron | 30.0% | |
| GTCTTCTACATATGAATTCT+TGG | + | chr5_2:47460461-47460480 | Msa0772960:CDS | 30.0% | |
| ATGGCATCAGAGATAAAAAT+TGG | - | chr5_2:47460609-47460628 | None:intergenic | 30.0% | |
| TTTCACTTCAAACAAGAACA+TGG | - | chr5_2:47460628-47460647 | None:intergenic | 30.0% | |
| AGGTTATCACAAAATATCTG+AGG | + | chr5_2:47461128-47461147 | Msa0772960:intron | 30.0% | |
| GGTTATCACAAAATATCTGA+GGG | + | chr5_2:47461129-47461148 | Msa0772960:intron | 30.0% | |
| !! | CATCTGGAGCATATATTTTT+GGG | - | chr5_2:47461302-47461321 | None:intergenic | 30.0% |
| !! | ACATCTGGAGCATATATTTT+TGG | - | chr5_2:47461303-47461322 | None:intergenic | 30.0% |
| GAATCCTCAGATATTTACAA+GGG | - | chr5_2:47461434-47461453 | None:intergenic | 30.0% | |
| AGAATCCTCAGATATTTACA+AGG | - | chr5_2:47461435-47461454 | None:intergenic | 30.0% | |
| TCATACTTCAGATCTATAGT+TGG | - | chr5_2:47461564-47461583 | None:intergenic | 30.0% | |
| ! | AACTATAGATCTGAAGTATG+AGG | + | chr5_2:47461563-47461582 | Msa0772960:intron | 30.0% |
| ! | ACTATAGATCTGAAGTATGA+GGG | + | chr5_2:47461564-47461583 | Msa0772960:intron | 30.0% |
| !! | GGAACCAAATTTTGATAACT+TGG | + | chr5_2:47461602-47461621 | Msa0772960:intron | 30.0% |
| AGCACCAAGTTATCAAAATT+TGG | - | chr5_2:47461609-47461628 | None:intergenic | 30.0% | |
| !!! | AAATTTTGATAACTTGGTGC+TGG | + | chr5_2:47461608-47461627 | Msa0772960:intron | 30.0% |
| ! | GGATTATTTTCTTGGAATAG+AGG | - | chr5_2:47461745-47461764 | None:intergenic | 30.0% |
| ! | AATTCTCTCTAAAGGATTTG+GGG | - | chr5_2:47461772-47461791 | None:intergenic | 30.0% |
| ! | GAATTCTCTCTAAAGGATTT+GGG | - | chr5_2:47461773-47461792 | None:intergenic | 30.0% |
| ! | AGAATTCTCTCTAAAGGATT+TGG | - | chr5_2:47461774-47461793 | None:intergenic | 30.0% |
| TAGATGATATCATCATCACA+GGG | - | chr5_2:47461841-47461860 | None:intergenic | 30.0% | |
| !!! | TAAATCACATGGTGGATTTT+AGG | + | chr5_2:47462346-47462365 | Msa0772960:intron | 30.0% |
| TAGCATATTGTGGAAAATAG+TGG | - | chr5_2:47462376-47462395 | None:intergenic | 30.0% | |
| GTGTTATCAATAGCATATTG+TGG | - | chr5_2:47462386-47462405 | None:intergenic | 30.0% | |
| ! | TGAATTGATGTCTCTAGAAA+AGG | + | chr5_2:47462526-47462545 | Msa0772960:CDS | 30.0% |
| AAAAAGTCGACAATATAAGG+GGG | - | chr5_2:47462610-47462629 | None:intergenic | 30.0% | |
| !!! | TGTCGACTTTTTTCAGTTTT+TGG | + | chr5_2:47462618-47462637 | Msa0772960:intron | 30.0% |
| ! | TTATAATGGAATGACTGACT+TGG | + | chr5_2:47462642-47462661 | Msa0772960:intron | 30.0% |
| AAGGTTAGTGATGAAATACA+AGG | + | chr5_2:47462729-47462748 | Msa0772960:CDS | 30.0% | |
| TAGTGATGAAATACAAGGAA+AGG | + | chr5_2:47462734-47462753 | Msa0772960:CDS | 30.0% | |
| ! | TATTTTTCATTTGCCGAAGT+TGG | + | chr5_2:47463119-47463138 | Msa0772960:intron | 30.0% |
| AATAACACGTAAAACCATCT+TGG | - | chr5_2:47463446-47463465 | None:intergenic | 30.0% | |
| ! | TGTTACCCTTTCAAGATTTT+CGG | + | chr5_2:47463490-47463509 | Msa0772960:intron | 30.0% |
| TACAACCGAAAATCTTGAAA+GGG | - | chr5_2:47463498-47463517 | None:intergenic | 30.0% | |
| TTACAACCGAAAATCTTGAA+AGG | - | chr5_2:47463499-47463518 | None:intergenic | 30.0% | |
| CTAGGATTCTCTTAACTTAA+GGG | - | chr5_2:47463844-47463863 | None:intergenic | 30.0% | |
| ! | TCTAGGATTCTCTTAACTTA+AGG | - | chr5_2:47463845-47463864 | None:intergenic | 30.0% |
| AATACAATAGAGCGATAAGT+AGG | + | chr5_2:47463872-47463891 | Msa0772960:intron | 30.0% | |
| ATACAATAGAGCGATAAGTA+GGG | + | chr5_2:47463873-47463892 | Msa0772960:intron | 30.0% | |
| TTGATCATCACTTGTATAAC+GGG | - | chr5_2:47463920-47463939 | None:intergenic | 30.0% | |
| TCATTTGGAAACAATAGCAT+TGG | + | chr5_2:47464213-47464232 | Msa0772960:intron | 30.0% | |
| !! | AAAGTGAGGTTAGTATTGAT+AGG | - | chr5_2:47464334-47464353 | None:intergenic | 30.0% |
| ATATGAGTTTCATAGGTAGA+CGG | + | chr5_2:47464732-47464751 | Msa0772960:intron | 30.0% | |
| AAAAAGAAACATCACAATGG+CGG | + | chr5_2:47465234-47465253 | Msa0772960:intron | 30.0% | |
| AGTTACATTTGTAACAAGCT+TGG | + | chr5_2:47465400-47465419 | Msa0772960:intron | 30.0% | |
| ATAGAACACGAGAAGAAAAT+TGG | + | chr5_2:47465827-47465846 | Msa0772960:CDS | 30.0% | |
| !!! | TTTCCTTTTTGGAACTGTTT+CGG | - | chr5_2:47465960-47465979 | None:intergenic | 30.0% |
| !!! | GGGTATTTTAGGATTACATT+TGG | + | chr5_2:47466031-47466050 | Msa0772960:intron | 30.0% |
| ! | GGAATAATCCTAGGTATTTT+AGG | + | chr5_2:47466052-47466071 | Msa0772960:intron | 30.0% |
| CTACATAAGGTAAAGATTGA+AGG | - | chr5_2:47466121-47466140 | None:intergenic | 30.0% | |
| ! | AAAGTGCTTCATTTAAGATG+TGG | + | chr5_2:47466176-47466195 | Msa0772960:CDS | 30.0% |
| GTAGTTATAACGAGAATAAC+CGG | + | chr5_2:47466262-47466281 | Msa0772960:CDS | 30.0% | |
| ! | CCTTTGGTAAATTGTTTCTT+TGG | - | chr5_2:47466351-47466370 | None:intergenic | 30.0% |
| CCAAAGAAACAATTTACCAA+AGG | + | chr5_2:47466348-47466367 | Msa0772960:CDS | 30.0% | |
| AAGAAACAATTTACCAAAGG+GGG | + | chr5_2:47466351-47466370 | Msa0772960:CDS | 30.0% | |
| TTACATCCATGTGTTGTATT+TGG | + | chr5_2:47466378-47466397 | Msa0772960:intron | 30.0% | |
| AGTCTTTATTGCAGAACATT+GGG | - | chr5_2:47466405-47466424 | None:intergenic | 30.0% | |
| AAGTCTTTATTGCAGAACAT+TGG | - | chr5_2:47466406-47466425 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTTCAGTTTTTTG+AGG | - | chr5_2:47466555-47466574 | None:intergenic | 30.0% |
| ATTGGGACATTATCGAAATT+TGG | + | chr5_2:47466754-47466773 | Msa0772960:intron | 30.0% | |
| ! | TGCTCTTTATGATAATGATG+AGG | + | chr5_2:47466787-47466806 | Msa0772960:intron | 30.0% |
| !! | TGATTTGGTTATTCATCAGA+TGG | + | chr5_2:47466886-47466905 | Msa0772960:CDS | 30.0% |
| CATCATAATAGTTGTAGTGA+AGG | + | chr5_2:47466989-47467008 | Msa0772960:intron | 30.0% | |
| CTACAAATATTGACATGATG+AGG | - | chr5_2:47467194-47467213 | None:intergenic | 30.0% | |
| TGGGAAAATACAACAAACAT+GGG | - | chr5_2:47467354-47467373 | None:intergenic | 30.0% | |
| ATGGGAAAATACAACAAACA+TGG | - | chr5_2:47467355-47467374 | None:intergenic | 30.0% | |
| GTATAGAGTATGTAGACTAT+GGG | - | chr5_2:47467373-47467392 | None:intergenic | 30.0% | |
| AGTATAGAGTATGTAGACTA+TGG | - | chr5_2:47467374-47467393 | None:intergenic | 30.0% | |
| CAATCAGAAATTATAAAGGG+TGG | + | chr5_2:47465108-47465127 | Msa0772960:intron | 30.0% | |
| TTACAGAGTAATAAACCCTA+AGG | + | chr5_2:47467769-47467788 | Msa0772960:intron | 30.0% | |
| TCTATCGTGAATTATCCTTA+GGG | - | chr5_2:47467787-47467806 | None:intergenic | 30.0% | |
| TAGAGTAATACTCATTCCTA+AGG | + | chr5_2:47467824-47467843 | Msa0772960:intron | 30.0% | |
| CTCTATAGTGAATTATCCTT+AGG | - | chr5_2:47467843-47467862 | None:intergenic | 30.0% | |
| TCTATCGTGAATTATCCTTA+AGG | - | chr5_2:47467787-47467806 | None:intergenic | 30.0% | |
| TTAATATTTGTCAAGGAACC+TGG | + | chr5_2:47468202-47468221 | Msa0772960:intron | 30.0% | |
| CAATGATTAATATTTGTCCG+AGG | + | chr5_2:47468266-47468285 | Msa0772960:intron | 30.0% | |
| !! | GAATCCTCTTTTAATTGACA+TGG | + | chr5_2:47468448-47468467 | Msa0772960:intron | 30.0% |
| ! | TTCATTTGTACTTTAGGAAG+GGG | - | chr5_2:47468628-47468647 | None:intergenic | 30.0% |
| ! | CTTCATTTGTACTTTAGGAA+GGG | - | chr5_2:47468629-47468648 | None:intergenic | 30.0% |
| ! | ACTTCATTTGTACTTTAGGA+AGG | - | chr5_2:47468630-47468649 | None:intergenic | 30.0% |
| ATAGAACACGAGAAGAAAAT+TGG | + | chr5_2:47465827-47465846 | Msa0772960:CDS | 30.0% | |
| !!! | AGAAGAAAATTGGCCTTTTT+GGG | + | chr5_2:47468661-47468680 | Msa0772960:intron | 30.0% |
| !!! | ATTTTTGGAAGTACCAGTTT+TGG | + | chr5_2:47468830-47468849 | Msa0772960:CDS | 30.0% |
| TCATTCAAGATATGGAGTAT+TGG | + | chr5_2:47468941-47468960 | Msa0772960:CDS | 30.0% | |
| TAACCCAAATTTAACCCAAC+GGG | + | chr5_2:47457265-47457284 | Msa0772960:five_prime_UTR | 35.0% | |
| !! | TTGATGAAATCGTCGATTTC+CGG | - | chr5_2:47457463-47457482 | None:intergenic | 35.0% |
| ! | ATTTTGTTCGGATTGTTTGG+AGG | - | chr5_2:47457551-47457570 | None:intergenic | 35.0% |
| ! | GAGATTTTGTTCGGATTGTT+TGG | - | chr5_2:47457554-47457573 | None:intergenic | 35.0% |
| !! | GGCGATAAAGAAATTTGTTG+AGG | + | chr5_2:47457757-47457776 | Msa0772960:five_prime_UTR | 35.0% |
| TGTTGAGGAGAATCAGAAAT+TGG | + | chr5_2:47457772-47457791 | Msa0772960:five_prime_UTR | 35.0% | |
| !! | TCAATACCGATTCATTCTCT+TGG | - | chr5_2:47457988-47458007 | None:intergenic | 35.0% |
| !! | ATACCTAGTTGTGTTGCTTA+GGG | + | chr5_2:47458101-47458120 | Msa0772960:intron | 35.0% |
| TCGAAAATAGACACTAGTGT+CGG | - | chr5_2:47458277-47458296 | None:intergenic | 35.0% | |
| TTGGGATATTGTTTAGTGAG+GGG | + | chr5_2:47458542-47458561 | Msa0772960:intron | 35.0% | |
| CTACCAAACCTTTACTTGTT+TGG | + | chr5_2:47458585-47458604 | Msa0772960:intron | 35.0% | |
| ATCCCAAACAAGTAAAGGTT+TGG | - | chr5_2:47458591-47458610 | None:intergenic | 35.0% | |
| ATGGAAAGAAAAAGAAGGGA+GGG | - | chr5_2:47458712-47458731 | None:intergenic | 35.0% | |
| GAAGGATGGAAAGAAAAAGA+AGG | - | chr5_2:47458717-47458736 | None:intergenic | 35.0% | |
| ATTGTTTGGAAGTTGAGTGA+AGG | - | chr5_2:47458735-47458754 | None:intergenic | 35.0% | |
| AACTTCCAAACAATGCCTTA+AGG | + | chr5_2:47458741-47458760 | Msa0772960:intron | 35.0% | |
| CAAACAATGCCTTAAGGAAT+GGG | + | chr5_2:47458747-47458766 | Msa0772960:intron | 35.0% | |
| AAACAATGCCTTAAGGAATG+GGG | + | chr5_2:47458748-47458767 | Msa0772960:intron | 35.0% | |
| TCAATCCATATCATCCCTTA+CGG | - | chr5_2:47458867-47458886 | None:intergenic | 35.0% | |
| GAGTAATTTAATTGCTGGGA+TGG | + | chr5_2:47458924-47458943 | Msa0772960:intron | 35.0% | |
| CAAACCATTGTATAGCATCA+GGG | - | chr5_2:47458955-47458974 | None:intergenic | 35.0% | |
| ! | CAGATAAGTTCTGACATACT+AGG | + | chr5_2:47459081-47459100 | Msa0772960:intron | 35.0% |
| AAATTATGTTGCCACAGGTA+AGG | - | chr5_2:47459133-47459152 | None:intergenic | 35.0% | |
| AGGAAAAATTATGTTGCCAC+AGG | - | chr5_2:47459138-47459157 | None:intergenic | 35.0% | |
| AAAGGACTCCATCAATTAAG+AGG | - | chr5_2:47459158-47459177 | None:intergenic | 35.0% | |
| TCAATCCATATCATCCCTTA+CGG | - | chr5_2:47458867-47458886 | None:intergenic | 35.0% | |
| GAGTAATTTAATTGCTGGGA+TGG | + | chr5_2:47458924-47458943 | Msa0772960:intron | 35.0% | |
| CAAACCATTGTATAGCATCA+GGG | - | chr5_2:47458955-47458974 | None:intergenic | 35.0% | |
| ! | CAGATAAGTTCTGACATACT+AGG | + | chr5_2:47459081-47459100 | Msa0772960:intron | 35.0% |
| AAATTATGTTGCCACAGGTA+AGG | - | chr5_2:47459133-47459152 | None:intergenic | 35.0% | |
| AGGAAAAATTATGTTGCCAC+AGG | - | chr5_2:47459138-47459157 | None:intergenic | 35.0% | |
| AAAGGACTCCATCAATTAAG+AGG | - | chr5_2:47459158-47459177 | None:intergenic | 35.0% | |
| GCATGTATACTTAAGAATGG+TGG | - | chr5_2:47460000-47460019 | None:intergenic | 35.0% | |
| GGCAAGTCCAAATTTAAATG+AGG | - | chr5_2:47460027-47460046 | None:intergenic | 35.0% | |
| TGTTAGATGAAATGCATTGC+AGG | - | chr5_2:47460081-47460100 | None:intergenic | 35.0% | |
| CAATGTTTCACGATACTAGT+GGG | - | chr5_2:47460134-47460153 | None:intergenic | 35.0% | |
| TCAATGTTTCACGATACTAG+TGG | - | chr5_2:47460135-47460154 | None:intergenic | 35.0% | |
| CATATAACCATGCCAAATTG+TGG | + | chr5_2:47460176-47460195 | Msa0772960:intron | 35.0% | |
| TAGTAGTAGTAGTCCAAGTT+GGG | - | chr5_2:47460218-47460237 | None:intergenic | 35.0% | |
| AATTTCGAAATATGGCTAGG+CGG | + | chr5_2:47460293-47460312 | Msa0772960:intron | 35.0% | |
| ! | TACTAAGGTTGACTCTTCTT+CGG | + | chr5_2:47460374-47460393 | Msa0772960:intron | 35.0% |
| AAACTTGACAAGAGAGTAAG+AGG | - | chr5_2:47460561-47460580 | None:intergenic | 35.0% | |
| ! | TTGTTTGAAGTGAAACTCCA+TGG | + | chr5_2:47460633-47460652 | Msa0772960:intron | 35.0% |
| ! | AGCTTTTCAAACTGTTTCCA+TGG | - | chr5_2:47460653-47460672 | None:intergenic | 35.0% |
| CTATCTTAGAGACAAACTGA+GGG | - | chr5_2:47460931-47460950 | None:intergenic | 35.0% | |
| TCTATCTTAGAGACAAACTG+AGG | - | chr5_2:47460932-47460951 | None:intergenic | 35.0% | |
| AAGATAGATGAATCTAGCAG+TGG | + | chr5_2:47460944-47460963 | Msa0772960:intron | 35.0% | |
| AAGAGAAAAGGTCATCAAGA+AGG | - | chr5_2:47461033-47461052 | None:intergenic | 35.0% | |
| TTGAATTAAGAACAGGGTTG+TGG | + | chr5_2:47461087-47461106 | Msa0772960:intron | 35.0% | |
| TGAATTAAGAACAGGGTTGT+GGG | + | chr5_2:47461088-47461107 | Msa0772960:intron | 35.0% | |
| CTGGATACAATCTTTACTTC+AGG | - | chr5_2:47461177-47461196 | None:intergenic | 35.0% | |
| ATGTACTCCTTCTATCATCA+GGG | + | chr5_2:47461319-47461338 | Msa0772960:intron | 35.0% | |
| ACACACTTTATTCACAGAGA+AGG | + | chr5_2:47461500-47461519 | Msa0772960:intron | 35.0% | |
| AAATAGTATGGCTTCACCAA+TGG | - | chr5_2:47461637-47461656 | None:intergenic | 35.0% | |
| CAACTCAGAATTCTCTCTAA+AGG | - | chr5_2:47461780-47461799 | None:intergenic | 35.0% | |
| GTAGATGATATCATCATCAC+AGG | - | chr5_2:47461842-47461861 | None:intergenic | 35.0% | |
| AAAACCAAAACTGAGAAGAG+TGG | + | chr5_2:47461930-47461949 | Msa0772960:intron | 35.0% | |
| ! | AAATCCACTCTTCTCAGTTT+TGG | - | chr5_2:47461937-47461956 | None:intergenic | 35.0% |
| ACAAACCAAGTTCTTGTTAG+AGG | + | chr5_2:47462016-47462035 | Msa0772960:intron | 35.0% | |
| TGAATCCTCTAACAAGAACT+TGG | - | chr5_2:47462024-47462043 | None:intergenic | 35.0% | |
| TTGTTAGAGGATTCAAAACC+AGG | + | chr5_2:47462029-47462048 | Msa0772960:intron | 35.0% | |
| ! | GCTTACTGAAGAGGTATATA+TGG | - | chr5_2:47462063-47462082 | None:intergenic | 35.0% |
| GTAAACAATGCCTTTCTCAA+TGG | - | chr5_2:47462089-47462108 | None:intergenic | 35.0% | |
| TGTTTACATCTAGCTGTTGA+AGG | + | chr5_2:47462102-47462121 | Msa0772960:intron | 35.0% | |
| GTTTACATCTAGCTGTTGAA+GGG | + | chr5_2:47462103-47462122 | Msa0772960:intron | 35.0% | |
| TTTACATCTAGCTGTTGAAG+GGG | + | chr5_2:47462104-47462123 | Msa0772960:intron | 35.0% | |
| ATGCTATCCACTAAATCACA+TGG | + | chr5_2:47462335-47462354 | Msa0772960:intron | 35.0% | |
| AAATCCACCATGTGATTTAG+TGG | - | chr5_2:47462345-47462364 | None:intergenic | 35.0% | |
| GCAGTAAACATGTAACAATC+AGG | + | chr5_2:47462407-47462426 | Msa0772960:intron | 35.0% | |
| GTAGCTTAAAGCAATCAACT+CGG | + | chr5_2:47462483-47462502 | Msa0772960:intron | 35.0% | |
| !! | AAAAGGACAAAGAGCATCTA+AGG | + | chr5_2:47462543-47462562 | Msa0772960:CDS | 35.0% |
| TATTGGAAAAGGAGAACAGA+AGG | + | chr5_2:47462710-47462729 | Msa0772960:CDS | 35.0% | |
| !! | TGTACAGAGTTAGTTTGCAA+GGG | - | chr5_2:47463001-47463020 | None:intergenic | 35.0% |
| !! | ATGTACAGAGTTAGTTTGCA+AGG | - | chr5_2:47463002-47463021 | None:intergenic | 35.0% |
| AGATCATCAAAACAGTTGTC+TGG | - | chr5_2:47463062-47463081 | None:intergenic | 35.0% | |
| !!! | TATCACCCTCTGTTTTTTCA+TGG | - | chr5_2:47463160-47463179 | None:intergenic | 35.0% |
| ! | TAACTATGTCGAGGTTTTTC+AGG | - | chr5_2:47463187-47463206 | None:intergenic | 35.0% |
| TAGTTATGCAGTTCAGAGTA+TGG | + | chr5_2:47463201-47463220 | Msa0772960:intron | 35.0% | |
| TGATCATCACTTGTATAACG+GGG | - | chr5_2:47463919-47463938 | None:intergenic | 35.0% | |
| ACTAATCTCTCGGTTGTATT+CGG | - | chr5_2:47463950-47463969 | None:intergenic | 35.0% | |
| AACACACGATACTAATCTCT+CGG | - | chr5_2:47463960-47463979 | None:intergenic | 35.0% | |
| ! | TCTTGTTTCATTTCAAGCAG+TGG | + | chr5_2:47464427-47464446 | Msa0772960:intron | 35.0% |
| TTTCATTTCAAGCAGTGGTT+TGG | + | chr5_2:47464432-47464451 | Msa0772960:intron | 35.0% | |
| ! | ATCTGTGTTAGTTTCATGTC+TGG | + | chr5_2:47464659-47464678 | Msa0772960:intron | 35.0% |
| GTCTACCTATGAAACTCATA+CGG | - | chr5_2:47464688-47464707 | None:intergenic | 35.0% | |
| GTCTACCTATGAAACTCATA+TGG | - | chr5_2:47464688-47464707 | None:intergenic | 35.0% | |
| TTCAACCAAATCATACCACA+AGG | - | chr5_2:47464912-47464931 | None:intergenic | 35.0% | |
| ATGGGAAAACACAACAAACA+AGG | - | chr5_2:47465023-47465042 | None:intergenic | 35.0% | |
| !! | GCTTGGTGTATATCTTCTTA+TGG | + | chr5_2:47465417-47465436 | Msa0772960:intron | 35.0% |
| !! | GAATCCTCTTTTAATGGACA+TGG | + | chr5_2:47465677-47465696 | Msa0772960:intron | 35.0% |
| TACACCATGTCCATTAAAAG+AGG | - | chr5_2:47465684-47465703 | None:intergenic | 35.0% | |
| ATTCTAACAGAACATGCGAA+TGG | + | chr5_2:47465911-47465930 | Msa0772960:CDS | 35.0% | |
| !!! | TTCCTTTTTGGAACTGTTTC+GGG | - | chr5_2:47465959-47465978 | None:intergenic | 35.0% |
| !! | AAAATTTTGGTCACCTGTGA+AGG | + | chr5_2:47465979-47465998 | Msa0772960:CDS | 35.0% |
| CCATTCTTCCTAAAATACCT+AGG | - | chr5_2:47466063-47466082 | None:intergenic | 35.0% | |
| !! | CCTAGGTATTTTAGGAAGAA+TGG | + | chr5_2:47466060-47466079 | Msa0772960:intron | 35.0% |
| AAGATGTGGTTTATTGGACA+TGG | + | chr5_2:47466190-47466209 | Msa0772960:CDS | 35.0% | |
| CTCGTTATAACTACTATGTC+AGG | - | chr5_2:47466256-47466275 | None:intergenic | 35.0% | |
| ! | GTCGTTACATAACCCATTTT+CGG | - | chr5_2:47466289-47466308 | None:intergenic | 35.0% |
| AGAAACAATTTACCAAAGGG+GGG | + | chr5_2:47466352-47466371 | Msa0772960:CDS | 35.0% | |
| TCACCTCTATAGAATTCGAA+CGG | + | chr5_2:47466503-47466522 | Msa0772960:CDS | 35.0% | |
| ATTCCGTTCGAATTCTATAG+AGG | - | chr5_2:47466509-47466528 | None:intergenic | 35.0% | |
| TTCACTCCTCAAAAAACTGA+AGG | + | chr5_2:47466546-47466565 | Msa0772960:CDS | 35.0% | |
| ! | CGTTGAAGAGAATCTGAAAT+TGG | + | chr5_2:47466712-47466731 | Msa0772960:intron | 35.0% |
| ! | TGAAGAGAATCTGAAATTGG+CGG | + | chr5_2:47466715-47466734 | Msa0772960:intron | 35.0% |
| GCAGAGTCTTAGAATCTATT+GGG | + | chr5_2:47466737-47466756 | Msa0772960:intron | 35.0% | |
| TTCAGTAAACCTTGGTTACT+AGG | - | chr5_2:47467094-47467113 | None:intergenic | 35.0% | |
| ! | AACATAATAAAGTGGCCTTG+TGG | + | chr5_2:47467225-47467244 | Msa0772960:intron | 35.0% |
| TGCTCATTCTTCAATATGCA+TGG | - | chr5_2:47467401-47467420 | None:intergenic | 35.0% | |
| AAGACTAATCAAAGATGCAG+TGG | - | chr5_2:47467709-47467728 | None:intergenic | 35.0% | |
| AGCTACATTTGTAACAAGCT+TGG | + | chr5_2:47467735-47467754 | Msa0772960:intron | 35.0% | |
| CTCTATCGTGAATTATCCTT+AGG | - | chr5_2:47467788-47467807 | None:intergenic | 35.0% | |
| CTTCATATCGTTACACCTTA+AGG | + | chr5_2:47467941-47467960 | Msa0772960:intron | 35.0% | |
| !! | TTTTTCAGCTGAAGAGTTTG+TGG | - | chr5_2:47468004-47468023 | None:intergenic | 35.0% |
| ATATTCACCATGACAGTTAG+AGG | - | chr5_2:47468088-47468107 | None:intergenic | 35.0% | |
| ACATAAATTCAACAGCTTGC+AGG | - | chr5_2:47468400-47468419 | None:intergenic | 35.0% | |
| TGCACCATGTCAATTAAAAG+AGG | - | chr5_2:47468455-47468474 | None:intergenic | 35.0% | |
| CATACATGTTTGTAGATTCC+AGG | + | chr5_2:47468601-47468620 | Msa0772960:intron | 35.0% | |
| !!! | GAGAAGAAAATTGGCCTTTT+TGG | + | chr5_2:47468660-47468679 | Msa0772960:intron | 35.0% |
| !!! | GAAGAAAATTGGCCTTTTTG+GGG | + | chr5_2:47468662-47468681 | Msa0772960:intron | 35.0% |
| GGTAATGTTATTCCCCAAAA+AGG | - | chr5_2:47468677-47468696 | None:intergenic | 35.0% | |
| !!! | TTCCTTTTTTGAACCGTCTT+GGG | - | chr5_2:47468783-47468802 | None:intergenic | 35.0% |
| !!! | TTTCCTTTTTTGAACCGTCT+TGG | - | chr5_2:47468784-47468803 | None:intergenic | 35.0% |
| TATCCATCAGTCTTTATCCT+AGG | + | chr5_2:47468872-47468891 | Msa0772960:CDS | 35.0% | |
| AACGTGCTTCATTCAAGATA+TGG | + | chr5_2:47468933-47468952 | Msa0772960:CDS | 35.0% | |
| !! | AAGATATGGAGTATTGGACA+TGG | + | chr5_2:47468947-47468966 | Msa0772960:CDS | 35.0% |
| ACACCCGTTGGGTTAAATTT+GGG | - | chr5_2:47457271-47457290 | None:intergenic | 40.0% | |
| ! | GTTTCTTTTTGACACCCGTT+GGG | - | chr5_2:47457282-47457301 | None:intergenic | 40.0% |
| GGTGTCAAAAAGAAACCCAA+CGG | + | chr5_2:47457286-47457305 | Msa0772960:five_prime_UTR | 40.0% | |
| !! | TGATGAAATCGTCGATTTCC+GGG | - | chr5_2:47457462-47457481 | None:intergenic | 40.0% |
| ! | CTGATCGTGGAGATTTTGTT+CGG | - | chr5_2:47457563-47457582 | None:intergenic | 40.0% |
| TGAGGAGAATCAGAAATTGG+CGG | + | chr5_2:47457775-47457794 | Msa0772960:five_prime_UTR | 40.0% | |
| GCATTGTAGAAAACTGGAGA+AGG | + | chr5_2:47457820-47457839 | Msa0772960:five_prime_UTR | 40.0% | |
| ATGTCGCCAAGAGAATGAAT+CGG | + | chr5_2:47457979-47457998 | Msa0772960:CDS | 40.0% | |
| !! | GATACCTAGTTGTGTTGCTT+AGG | + | chr5_2:47458100-47458119 | Msa0772960:intron | 40.0% |
| ATTCCCTAAGCAACACAACT+AGG | - | chr5_2:47458107-47458126 | None:intergenic | 40.0% | |
| !! | TAGTTGTGTTGCTTAGGGAA+TGG | + | chr5_2:47458106-47458125 | Msa0772960:intron | 40.0% |
| GATATTGTTTAGTGAGGGGA+AGG | + | chr5_2:47458546-47458565 | Msa0772960:intron | 40.0% | |
| GATGGAAAGAAAAAGAAGGG+AGG | - | chr5_2:47458713-47458732 | None:intergenic | 40.0% | |
| TTTGGAAGTTGAGTGAAGGA+TGG | - | chr5_2:47458731-47458750 | None:intergenic | 40.0% | |
| !! | CCATTCCTTAAGGCATTGTT+TGG | - | chr5_2:47458749-47458768 | None:intergenic | 40.0% |
| CCAAACAATGCCTTAAGGAA+TGG | + | chr5_2:47458746-47458765 | Msa0772960:intron | 40.0% | |
| TTGTCTCTCTCTGTATGAGA+GGG | + | chr5_2:47458795-47458814 | Msa0772960:intron | 40.0% | |
| TACACCCTGATGCTATACAA+TGG | + | chr5_2:47458948-47458967 | Msa0772960:intron | 40.0% | |
| CCAAACCATTGTATAGCATC+AGG | - | chr5_2:47458956-47458975 | None:intergenic | 40.0% | |
| CCTGATGCTATACAATGGTT+TGG | + | chr5_2:47458953-47458972 | Msa0772960:intron | 40.0% | |
| ACTAGGATTCAAACCAGACA+TGG | + | chr5_2:47459098-47459117 | Msa0772960:intron | 40.0% | |
| AAGGACTTATGAACCATGTC+TGG | - | chr5_2:47459114-47459133 | None:intergenic | 40.0% | |
| AGATGCCTCATATGACTTTC+AGG | - | chr5_2:47459271-47459290 | None:intergenic | 40.0% | |
| GAGAAATCCAACAATAGCTC+AGG | - | chr5_2:47459295-47459314 | None:intergenic | 40.0% | |
| TACACCCTGATGCTATACAA+TGG | + | chr5_2:47458948-47458967 | Msa0772960:intron | 40.0% | |
| CCAAACCATTGTATAGCATC+AGG | - | chr5_2:47458956-47458975 | None:intergenic | 40.0% | |
| CCTGATGCTATACAATGGTT+TGG | + | chr5_2:47458953-47458972 | Msa0772960:intron | 40.0% | |
| ACTAGGATTCAAACCAGACA+TGG | + | chr5_2:47459098-47459117 | Msa0772960:intron | 40.0% | |
| AAGGACTTATGAACCATGTC+TGG | - | chr5_2:47459114-47459133 | None:intergenic | 40.0% | |
| AGATGCCTCATATGACTTTC+AGG | - | chr5_2:47459271-47459290 | None:intergenic | 40.0% | |
| GAGAAATCCAACAATAGCTC+AGG | - | chr5_2:47459295-47459314 | None:intergenic | 40.0% | |
| CTTTGACAGTACATTCACTC+AGG | + | chr5_2:47459386-47459405 | Msa0772960:intron | 40.0% | |
| GACTTAGCAGTACCACAATT+TGG | - | chr5_2:47460191-47460210 | None:intergenic | 40.0% | |
| AATTGTGGTACTGCTAAGTC+AGG | + | chr5_2:47460191-47460210 | Msa0772960:intron | 40.0% | |
| GTAGTAGTAGTAGTCCAAGT+TGG | - | chr5_2:47460219-47460238 | None:intergenic | 40.0% | |
| !! | GAGTTTGCTTGACTCTCTTT+TGG | + | chr5_2:47460416-47460435 | Msa0772960:CDS | 40.0% |
| GTAAAAAGCTGCTGTCAATG+TGG | + | chr5_2:47460508-47460527 | Msa0772960:CDS | 40.0% | |
| AAGCTTCTGCTGAAATCATC+TGG | - | chr5_2:47461196-47461215 | None:intergenic | 40.0% | |
| !! | TCCTAATTTGGTGTCTTGGT+GGG | - | chr5_2:47461279-47461298 | None:intergenic | 40.0% |
| ! | GATGATAGAAGGAGTACATC+TGG | - | chr5_2:47461318-47461337 | None:intergenic | 40.0% |
| GATGTACTCCTTCTATCATC+AGG | + | chr5_2:47461318-47461337 | Msa0772960:intron | 40.0% | |
| TTCACAGAGAAGGAGATTTC+AGG | + | chr5_2:47461510-47461529 | Msa0772960:intron | 40.0% | |
| TGAGGGATCAGAAACACTAT+TGG | + | chr5_2:47461581-47461600 | Msa0772960:intron | 40.0% | |
| GATAAAAGTAGGGAACCTGA+TGG | + | chr5_2:47461708-47461727 | Msa0772960:intron | 40.0% | |
| ! | GGGGAACTGGATTATTTTCT+TGG | - | chr5_2:47461753-47461772 | None:intergenic | 40.0% |
| !! | TGAGTTGATGAACTAGTTGC+TGG | + | chr5_2:47461798-47461817 | Msa0772960:intron | 40.0% |
| TTAGAGGATTCAAAACCAGG+AGG | + | chr5_2:47462032-47462051 | Msa0772960:intron | 40.0% | |
| AGTAAGCAAGCCATTGAGAA+AGG | + | chr5_2:47462076-47462095 | Msa0772960:intron | 40.0% | |
| AAAACTGTTCTCACTGTGAC+AGG | + | chr5_2:47462152-47462171 | Msa0772960:intron | 40.0% | |
| ACTGTGACAGGTTTAACAAC+AGG | + | chr5_2:47462164-47462183 | Msa0772960:intron | 40.0% | |
| GGATAGCATAATTCGGAAAG+AGG | - | chr5_2:47462324-47462343 | None:intergenic | 40.0% | |
| CTATCCACTAAATCACATGG+TGG | + | chr5_2:47462338-47462357 | Msa0772960:intron | 40.0% | |
| GAAAGGAGTCATAGAGAATC+TGG | + | chr5_2:47462751-47462770 | Msa0772960:CDS | 40.0% | |
| TACCAATAGTACATCTGCCA+AGG | + | chr5_2:47462783-47462802 | Msa0772960:CDS | 40.0% | |
| TACCTTGGCAGATGTACTAT+TGG | - | chr5_2:47462788-47462807 | None:intergenic | 40.0% | |
| CGAGCTACTTGTCTTTGAAT+TGG | - | chr5_2:47462918-47462937 | None:intergenic | 40.0% | |
| TTCAAAGACAAGTAGCTCGA+TGG | + | chr5_2:47462919-47462938 | Msa0772960:CDS | 40.0% | |
| GATTCAGTATCACCTAGACA+AGG | + | chr5_2:47462968-47462987 | Msa0772960:CDS | 40.0% | |
| AGGAAGATGAATCTAGACAG+TGG | - | chr5_2:47463035-47463054 | None:intergenic | 40.0% | |
| CAAAACAGTTGTCTGGTTAG+AGG | - | chr5_2:47463055-47463074 | None:intergenic | 40.0% | |
| TGAACTGCATAACTATGTCG+AGG | - | chr5_2:47463196-47463215 | None:intergenic | 40.0% | |
| TTTCAACCAAATGACCTCTC+AGG | - | chr5_2:47464084-47464103 | None:intergenic | 40.0% | |
| TTTCGACCACTTATGGCTAT+GGG | - | chr5_2:47464311-47464330 | None:intergenic | 40.0% | |
| TGATAGGTTTCGACCACTTA+TGG | - | chr5_2:47464318-47464337 | None:intergenic | 40.0% | |
| !! | TCTTTGGTTGTTTCTGCTTG+TGG | + | chr5_2:47464375-47464394 | Msa0772960:intron | 40.0% |
| !! | CTTTGGTTGTTTCTGCTTGT+GGG | + | chr5_2:47464376-47464395 | Msa0772960:intron | 40.0% |
| AACAAGAAACCAATCTCAGC+AGG | - | chr5_2:47464414-47464433 | None:intergenic | 40.0% | |
| !! | ATTTCAAGCAGTGGTTTGGT+GGG | + | chr5_2:47464436-47464455 | Msa0772960:intron | 40.0% |
| AATTACCTACACACCCGATT+CGG | - | chr5_2:47464468-47464487 | None:intergenic | 40.0% | |
| GTAGATGACACTCACACATA+TGG | + | chr5_2:47464602-47464621 | Msa0772960:intron | 40.0% | |
| AGACATGTTAGTTGCATGTC+TGG | + | chr5_2:47464704-47464723 | Msa0772960:intron | 40.0% | |
| GGTGTCCATATGAGTTTCAT+AGG | + | chr5_2:47464725-47464744 | Msa0772960:intron | 40.0% | |
| TAGGTAGACGGTAGTAACTA+AGG | + | chr5_2:47464744-47464763 | Msa0772960:intron | 40.0% | |
| ! | GACATATTAATGTGGCCTTG+TGG | + | chr5_2:47464894-47464913 | Msa0772960:intron | 40.0% |
| ! | GTATAGAGCATGTCGACTAT+GGG | - | chr5_2:47465041-47465060 | None:intergenic | 40.0% |
| ! | AGTATAGAGCATGTCGACTA+TGG | - | chr5_2:47465042-47465061 | None:intergenic | 40.0% |
| TATAAGGTAGAGTTCGAGGA+GGG | + | chr5_2:47465149-47465168 | Msa0772960:intron | 40.0% | |
| AAGGCATACACCAAGCTATT+GGG | - | chr5_2:47465484-47465503 | None:intergenic | 40.0% | |
| ATGTTCAGCTGAAGAGATTG+CGG | - | chr5_2:47465521-47465540 | None:intergenic | 40.0% | |
| GCATCATGTTTGTAGATTCC+AGG | + | chr5_2:47465782-47465801 | Msa0772960:intron | 40.0% | |
| !! | ACGAGAAGAAAATTGGCCTT+TGG | + | chr5_2:47465834-47465853 | Msa0772960:CDS | 40.0% |
| !! | CGAGAAGAAAATTGGCCTTT+GGG | + | chr5_2:47465835-47465854 | Msa0772960:CDS | 40.0% |
| !! | GAGAAGAAAATTGGCCTTTG+GGG | + | chr5_2:47465836-47465855 | Msa0772960:CDS | 40.0% |
| ! | GTAGTGTTGTTATTCCCCAA+AGG | - | chr5_2:47465853-47465872 | None:intergenic | 40.0% |
| ATCCCGAAACAGTTCCAAAA+AGG | + | chr5_2:47465954-47465973 | Msa0772960:CDS | 40.0% | |
| CTAAAATGTACAGCCTTCAC+AGG | - | chr5_2:47465995-47466014 | None:intergenic | 40.0% | |
| ! | CTGTGAAGGCTGTACATTTT+AGG | + | chr5_2:47465993-47466012 | Msa0772960:CDS | 40.0% |
| ATTCTCGCCGAAACTACATA+AGG | - | chr5_2:47466134-47466153 | None:intergenic | 40.0% | |
| TTATGTAGTTTCGGCGAGAA+TGG | + | chr5_2:47466133-47466152 | Msa0772960:intron | 40.0% | |
| TTTCCACTTCCTCTTCAGAA+GGG | - | chr5_2:47466159-47466178 | None:intergenic | 40.0% | |
| AATGAGAGTCTTGCTGCAAA+TGG | + | chr5_2:47466220-47466239 | Msa0772960:CDS | 40.0% | |
| AGAATAACCGGACCGAAAAT+GGG | + | chr5_2:47466274-47466293 | Msa0772960:CDS | 40.0% | |
| ! | TACATAACCCATTTTCGGTC+CGG | - | chr5_2:47466284-47466303 | None:intergenic | 40.0% |
| !! | AATGGGTTATGTAACGACAC+TGG | + | chr5_2:47466291-47466310 | Msa0772960:CDS | 40.0% |
| !! | CAAAGAAGTACAAGAGCACT+CGG | - | chr5_2:47466328-47466347 | None:intergenic | 40.0% |
| TTGGGACCAAATACAACACA+TGG | - | chr5_2:47466387-47466406 | None:intergenic | 40.0% | |
| GACTAGTGCAGCTCATTATT+TGG | + | chr5_2:47466479-47466498 | Msa0772960:intron | 40.0% | |
| GGCAGAGTCTTAGAATCTAT+TGG | + | chr5_2:47466736-47466755 | Msa0772960:intron | 40.0% | |
| TGAAGAGTTGGAACGTGATT+TGG | + | chr5_2:47466871-47466890 | Msa0772960:CDS | 40.0% | |
| ! | TACCATAGGCTTTGCTCTTT+TGG | - | chr5_2:47466948-47466967 | None:intergenic | 40.0% |
| GTTTGATGTCCTAGTAACCA+AGG | + | chr5_2:47467082-47467101 | Msa0772960:intron | 40.0% | |
| CTCCACAAACTCTACCTTAT+GGG | - | chr5_2:47467486-47467505 | None:intergenic | 40.0% | |
| CATAAGGTAGAGTTTGTGGA+GGG | + | chr5_2:47467485-47467504 | Msa0772960:intron | 40.0% | |
| TGAGTAAAACTTGAGGCTCA+AGG | - | chr5_2:47468235-47468254 | None:intergenic | 40.0% | |
| AGTCGGTTGAGTAAAACTTG+AGG | - | chr5_2:47468242-47468261 | None:intergenic | 40.0% | |
| AGATCCTTTAAGCAAAGCCT+CGG | - | chr5_2:47468286-47468305 | None:intergenic | 40.0% | |
| TTTCTAACAGAACACGCCAA+TGG | + | chr5_2:47468735-47468754 | Msa0772960:intron | 40.0% | |
| ATTGAACGAGAATCCCAAGA+CGG | + | chr5_2:47468767-47468786 | Msa0772960:CDS | 40.0% | |
| ATCCCAAGACGGTTCAAAAA+AGG | + | chr5_2:47468778-47468797 | Msa0772960:CDS | 40.0% | |
| CTGGTACTTCCAAAAATACC+CGG | - | chr5_2:47468827-47468846 | None:intergenic | 40.0% | |
| !!! | GAAGTACCAGTTTTGGAAGA+TGG | + | chr5_2:47468837-47468856 | Msa0772960:CDS | 40.0% |
| AAGAAGCCATCTTCCAAAAC+TGG | - | chr5_2:47468846-47468865 | None:intergenic | 40.0% | |
| CTACCTAGGATAAAGACTGA+TGG | - | chr5_2:47468878-47468897 | None:intergenic | 40.0% | |
| AATGAGAGTCTTGCTGCAAA+TGG | + | chr5_2:47466220-47466239 | Msa0772960:CDS | 40.0% | |
| GACACCCGTTGGGTTAAATT+TGG | - | chr5_2:47457272-47457291 | None:intergenic | 45.0% | |
| ! | GGTTTCTTTTTGACACCCGT+TGG | - | chr5_2:47457283-47457302 | None:intergenic | 45.0% |
| TTGAAATCTCACGAGCCGTT+GGG | - | chr5_2:47457304-47457323 | None:intergenic | 45.0% | |
| ATTGAAATCTCACGAGCCGT+TGG | - | chr5_2:47457305-47457324 | None:intergenic | 45.0% | |
| ATTGAAGAGATGCGATGCGA+TGG | - | chr5_2:47457349-47457368 | None:intergenic | 45.0% | |
| !! | ATGAAATCGTCGATTTCCGG+GGG | - | chr5_2:47457460-47457479 | None:intergenic | 45.0% |
| !! | GATGAAATCGTCGATTTCCG+GGG | - | chr5_2:47457461-47457480 | None:intergenic | 45.0% |
| CAATCCATCGACCACTCTTT+AGG | + | chr5_2:47457484-47457503 | Msa0772960:five_prime_UTR | 45.0% | |
| AAGACCTAAAGAGTGGTCGA+TGG | - | chr5_2:47457491-47457510 | None:intergenic | 45.0% | |
| AGATGGGAAGACCTAAAGAG+TGG | - | chr5_2:47457498-47457517 | None:intergenic | 45.0% | |
| AAGCTTGATGTCGAGGGTTT+GGG | - | chr5_2:47457524-47457543 | None:intergenic | 45.0% | |
| CCTTGGATTGTTCGATGAGT+TGG | - | chr5_2:47457620-47457639 | None:intergenic | 45.0% | |
| CCAACTCATCGAACAATCCA+AGG | + | chr5_2:47457617-47457636 | Msa0772960:five_prime_UTR | 45.0% | |
| GGAGGGTTTGAAAGAAACCT+TGG | - | chr5_2:47457637-47457656 | None:intergenic | 45.0% | |
| !! | GTTGGGGCATTGTAGAAAAC+TGG | + | chr5_2:47457814-47457833 | Msa0772960:five_prime_UTR | 45.0% |
| ATGAAGCTGAAGAACAAGCG+AGG | + | chr5_2:47457891-47457910 | Msa0772960:five_prime_UTR | 45.0% | |
| TGAAGCTGAAGAACAAGCGA+GGG | + | chr5_2:47457892-47457911 | Msa0772960:five_prime_UTR | 45.0% | |
| TGAGGAGTTGGAACGTGATT+TGG | + | chr5_2:47457931-47457950 | Msa0772960:five_prime_UTR | 45.0% | |
| !! | TATTGGTGTTGACGTGTCTG+TGG | + | chr5_2:47458344-47458363 | Msa0772960:intron | 45.0% |
| TGTTTAGTGAGGGGAAGGAA+AGG | + | chr5_2:47458551-47458570 | Msa0772960:intron | 45.0% | |
| GTTTAGTGAGGGGAAGGAAA+GGG | + | chr5_2:47458552-47458571 | Msa0772960:intron | 45.0% | |
| TTAAGGAATGGGGTCGTATG+CGG | + | chr5_2:47458758-47458777 | Msa0772960:intron | 45.0% | |
| ACAGAGAGAGACAAGAGATC+AGG | - | chr5_2:47458789-47458808 | None:intergenic | 45.0% | |
| CTTGTCTCTCTCTGTATGAG+AGG | + | chr5_2:47458794-47458813 | Msa0772960:intron | 45.0% | |
| AGAGAGAGAGAATGCCGTAA+GGG | + | chr5_2:47458850-47458869 | Msa0772960:intron | 45.0% | |
| GAATGCCGTAAGGGATGATA+TGG | + | chr5_2:47458859-47458878 | Msa0772960:intron | 45.0% | |
| GGTTCATAAGTCCTTACCTG+TGG | + | chr5_2:47459119-47459138 | Msa0772960:intron | 45.0% | |
| ! | CAAATACTCAGTGATGGAGC+CGG | - | chr5_2:47459217-47459236 | None:intergenic | 45.0% |
| GCATCTTCCTGAGCTATTGT+TGG | + | chr5_2:47459285-47459304 | Msa0772960:intron | 45.0% | |
| AGAGAGAGAGAATGCCGTAA+GGG | + | chr5_2:47458850-47458869 | Msa0772960:intron | 45.0% | |
| GAATGCCGTAAGGGATGATA+TGG | + | chr5_2:47458859-47458878 | Msa0772960:intron | 45.0% | |
| GGTTCATAAGTCCTTACCTG+TGG | + | chr5_2:47459119-47459138 | Msa0772960:intron | 45.0% | |
| ! | CAAATACTCAGTGATGGAGC+CGG | - | chr5_2:47459217-47459236 | None:intergenic | 45.0% |
| GCATCTTCCTGAGCTATTGT+TGG | + | chr5_2:47459285-47459304 | Msa0772960:intron | 45.0% | |
| AGCAGTACCACAATTTGGCA+TGG | - | chr5_2:47460186-47460205 | None:intergenic | 45.0% | |
| AACATTCCCCCTTCAAACTG+AGG | + | chr5_2:47460895-47460914 | Msa0772960:intron | 45.0% | |
| ACATTCCCCCTTCAAACTGA+GGG | + | chr5_2:47460896-47460915 | Msa0772960:intron | 45.0% | |
| TGTGACACCCTCAGTTTGAA+GGG | - | chr5_2:47460906-47460925 | None:intergenic | 45.0% | |
| TTGTGACACCCTCAGTTTGA+AGG | - | chr5_2:47460907-47460926 | None:intergenic | 45.0% | |
| ATGAATCTAGCAGTGGACAG+AGG | + | chr5_2:47460951-47460970 | Msa0772960:intron | 45.0% | |
| TGTACCTGCTCAAGATCAGT+GGG | - | chr5_2:47460994-47461013 | None:intergenic | 45.0% | |
| ATGTACCTGCTCAAGATCAG+TGG | - | chr5_2:47460995-47461014 | None:intergenic | 45.0% | |
| ACTGATCTTGAGCAGGTACA+TGG | + | chr5_2:47460994-47461013 | Msa0772960:intron | 45.0% | |
| CTGATCTTGAGCAGGTACAT+GGG | + | chr5_2:47460995-47461014 | Msa0772960:intron | 45.0% | |
| GGCAAGGAAACAAACACTAG+TGG | - | chr5_2:47461258-47461277 | None:intergenic | 45.0% | |
| !! | GTCCTAATTTGGTGTCTTGG+TGG | - | chr5_2:47461280-47461299 | None:intergenic | 45.0% |
| !! | TGGGTCCTAATTTGGTGTCT+TGG | - | chr5_2:47461283-47461302 | None:intergenic | 45.0% |
| CTTCAGACCCTGATGATAGA+AGG | - | chr5_2:47461329-47461348 | None:intergenic | 45.0% | |
| !! | CGGGTTTTGTGATGCTGATT+GGG | - | chr5_2:47461352-47461371 | None:intergenic | 45.0% |
| CCAATCAGCATCACAAAACC+CGG | + | chr5_2:47461350-47461369 | Msa0772960:intron | 45.0% | |
| TGAGAAGCAAACCATGATGC+AGG | + | chr5_2:47461406-47461425 | Msa0772960:intron | 45.0% | |
| GAGAAGCAAACCATGATGCA+GGG | + | chr5_2:47461407-47461426 | Msa0772960:intron | 45.0% | |
| GGGTCCCTTGTAAATATCTG+AGG | + | chr5_2:47461427-47461446 | Msa0772960:intron | 45.0% | |
| TCAGTTTCTATCTGCACCTC+AGG | - | chr5_2:47461481-47461500 | None:intergenic | 45.0% | |
| ! | CTCTAAAGGATTTGGGGAAC+TGG | - | chr5_2:47461766-47461785 | None:intergenic | 45.0% |
| CAATGAAGGATCACATCTGC+TGG | + | chr5_2:47461903-47461922 | Msa0772960:intron | 45.0% | |
| AGTCTGTCAAACCAAGCTCT+AGG | + | chr5_2:47461958-47461977 | Msa0772960:intron | 45.0% | |
| GTCTGTCAAACCAAGCTCTA+GGG | + | chr5_2:47461959-47461978 | Msa0772960:intron | 45.0% | |
| ! | TCTGTCAAACCAAGCTCTAG+GGG | + | chr5_2:47461960-47461979 | Msa0772960:intron | 45.0% |
| ! | AGGGGCTTGTTTCAATCCAT+AGG | + | chr5_2:47461978-47461997 | Msa0772960:intron | 45.0% |
| ! | GGGGCTTGTTTCAATCCATA+GGG | + | chr5_2:47461979-47461998 | Msa0772960:intron | 45.0% |
| ! | GGGCTTGTTTCAATCCATAG+GGG | + | chr5_2:47461980-47461999 | Msa0772960:intron | 45.0% |
| !! | CTTGGTTTGTAAGCTACGCA+AGG | - | chr5_2:47462006-47462025 | None:intergenic | 45.0% |
| !! | CAATGGCTTGCTTACTGAAG+AGG | - | chr5_2:47462072-47462091 | None:intergenic | 45.0% |
| CTCTAGCTATCACTCAACAC+TGG | - | chr5_2:47462130-47462149 | None:intergenic | 45.0% | |
| !! | ATGGAATGACTGACTTGGCT+TGG | + | chr5_2:47462647-47462666 | Msa0772960:intron | 45.0% |
| AGGAGTCATAGAGAATCTGG+TGG | + | chr5_2:47462754-47462773 | Msa0772960:CDS | 45.0% | |
| GGAGTCATAGAGAATCTGGT+GGG | + | chr5_2:47462755-47462774 | Msa0772960:CDS | 45.0% | |
| TCTGCCAAGGTAAGAATCGT+AGG | + | chr5_2:47462796-47462815 | Msa0772960:intron | 45.0% | |
| CTGCCAAGGTAAGAATCGTA+GGG | + | chr5_2:47462797-47462816 | Msa0772960:intron | 45.0% | |
| TGCCAAGGTAAGAATCGTAG+GGG | + | chr5_2:47462798-47462817 | Msa0772960:intron | 45.0% | |
| AAGGGTGACAATCCTTGTCT+AGG | - | chr5_2:47462983-47463002 | None:intergenic | 45.0% | |
| ! | CTATGGGCTCCTTTTTCCTA+AGG | - | chr5_2:47463397-47463416 | None:intergenic | 45.0% |
| CAAATGACCTCTCAGGAAAC+TGG | - | chr5_2:47464077-47464096 | None:intergenic | 45.0% | |
| CAGTTTCCTGAGAGGTCATT+TGG | + | chr5_2:47464075-47464094 | Msa0772960:intron | 45.0% | |
| GTCTCGAACTGAGTTTCACA+AGG | - | chr5_2:47464121-47464140 | None:intergenic | 45.0% | |
| GTGAAACTCAGTTCGAGACT+CGG | + | chr5_2:47464122-47464141 | Msa0772960:intron | 45.0% | |
| ATTGGACCCATAGCCATAAG+TGG | + | chr5_2:47464302-47464321 | Msa0772960:intron | 45.0% | |
| GTTTCGACCACTTATGGCTA+TGG | - | chr5_2:47464312-47464331 | None:intergenic | 45.0% | |
| ! | CATTTCAAGCAGTGGTTTGG+TGG | + | chr5_2:47464435-47464454 | Msa0772960:intron | 45.0% |
| GGTGTCCGTATGAGTTTCAT+AGG | + | chr5_2:47464680-47464699 | Msa0772960:intron | 45.0% | |
| !! | TGTGGCCTTGTGGTATGATT+TGG | + | chr5_2:47464904-47464923 | Msa0772960:intron | 45.0% |
| TTATAGGAGCCAAGTGCACT+GGG | - | chr5_2:47465134-47465153 | None:intergenic | 45.0% | |
| CTCCTATAAGGTAGAGTTCG+AGG | + | chr5_2:47465145-47465164 | Msa0772960:intron | 45.0% | |
| CTCCTCGAACTCTACCTTAT+AGG | - | chr5_2:47465150-47465169 | None:intergenic | 45.0% | |
| CTATAAGGTAGAGTTCGAGG+AGG | + | chr5_2:47465148-47465167 | Msa0772960:intron | 45.0% | |
| ! | GAAGGCATACACCAAGCTAT+TGG | - | chr5_2:47465485-47465504 | None:intergenic | 45.0% |
| TGCGGCATAGTGTCATATGA+AGG | - | chr5_2:47465503-47465522 | None:intergenic | 45.0% | |
| TCAGCAGATGCAACTGTTGT+TGG | + | chr5_2:47465875-47465894 | Msa0772960:CDS | 45.0% | |
| TTTAGGAAGAATGGCCCTTC+TGG | + | chr5_2:47466069-47466088 | Msa0772960:intron | 45.0% | |
| AAGCATCCTTCACACCAGAA+GGG | - | chr5_2:47466086-47466105 | None:intergenic | 45.0% | |
| CTTTCCACTTCCTCTTCAGA+AGG | - | chr5_2:47466160-47466179 | None:intergenic | 45.0% | |
| GAGAATAACCGGACCGAAAA+TGG | + | chr5_2:47466273-47466292 | Msa0772960:CDS | 45.0% | |
| TTGTTTGCGAGCTGAAGAGT+TGG | + | chr5_2:47466859-47466878 | Msa0772960:CDS | 45.0% | |
| GACCAAAAGAGCAAAGCCTA+TGG | + | chr5_2:47466943-47466962 | Msa0772960:CDS | 45.0% | |
| ATACATGACGCTTGTGCTAG+TGG | + | chr5_2:47467037-47467056 | Msa0772960:intron | 45.0% | |
| CTCCCATAAGGTAGAGTTTG+TGG | + | chr5_2:47467481-47467500 | Msa0772960:intron | 45.0% | |
| CCTCCACAAACTCTACCTTA+TGG | - | chr5_2:47467487-47467506 | None:intergenic | 45.0% | |
| CCATAAGGTAGAGTTTGTGG+AGG | + | chr5_2:47467484-47467503 | Msa0772960:intron | 45.0% | |
| GAAGAGTTTGTGGCATAGTC+AGG | - | chr5_2:47467994-47468013 | None:intergenic | 45.0% | |
| GAATCCTCCTCTAACTGTCA+TGG | + | chr5_2:47468078-47468097 | Msa0772960:intron | 45.0% | |
| TTCACCATGACAGTTAGAGG+AGG | - | chr5_2:47468085-47468104 | None:intergenic | 45.0% | |
| TATTTGTCAAGGAACCTGGC+TGG | + | chr5_2:47468206-47468225 | Msa0772960:intron | 45.0% | |
| TTGTCCGAGGCTTTGCTTAA+AGG | + | chr5_2:47468279-47468298 | Msa0772960:intron | 45.0% | |
| !!! | TTTTTTGGTCACCTGTGAGC+CGG | + | chr5_2:47468805-47468824 | Msa0772960:CDS | 45.0% |
| ! | CATTTTCGCTGCAACTACCT+AGG | - | chr5_2:47468892-47468911 | None:intergenic | 45.0% |
| CTAGGTAGTTGCAGCGAAAA+TGG | + | chr5_2:47468890-47468909 | Msa0772960:CDS | 45.0% | |
| ! | CGAAAATGGTCCTTCTGAAG+AGG | + | chr5_2:47468904-47468923 | Msa0772960:CDS | 45.0% |
| !! | ATATTATAGAAAATTATTAA+AGG | + | chr5_2:47463612-47463631 | Msa0772960:intron | 5.0% |
| !!! | TAATAGTTAATAATTAATTT+TGG | - | chr5_2:47463720-47463739 | None:intergenic | 5.0% |
| !!! | TAATATTAAAAATTGTATTT+TGG | - | chr5_2:47463995-47464014 | None:intergenic | 5.0% |
| !!! | TTTTATTTTAAATTTCTTTT+TGG | + | chr5_2:47466640-47466659 | Msa0772960:intron | 5.0% |
| !! | CTTAATTAAAATTTAAAAAT+TGG | - | chr5_2:47468581-47468600 | None:intergenic | 5.0% |
| GTGGAAGTGAGAGCTGTAGA+GGG | - | chr5_2:47457380-47457399 | None:intergenic | 50.0% | |
| !! | TGAAATCGTCGATTTCCGGG+GGG | - | chr5_2:47457459-47457478 | None:intergenic | 50.0% |
| GAAGCTTGATGTCGAGGGTT+TGG | - | chr5_2:47457525-47457544 | None:intergenic | 50.0% | |
| GGAGAATCAGAAATTGGCGG+CGG | + | chr5_2:47457778-47457797 | Msa0772960:five_prime_UTR | 50.0% | |
| GCGGAGTGTGAGAATCTGTT+GGG | + | chr5_2:47457797-47457816 | Msa0772960:five_prime_UTR | 50.0% | |
| CGGAGTGTGAGAATCTGTTG+GGG | + | chr5_2:47457798-47457817 | Msa0772960:five_prime_UTR | 50.0% | |
| GCATACGACCCCATTCCTTA+AGG | - | chr5_2:47458759-47458778 | None:intergenic | 50.0% | |
| TCTCTCTCTGTATGAGAGGG+AGG | + | chr5_2:47458798-47458817 | Msa0772960:intron | 50.0% | |
| CTCTCTCTGTATGAGAGGGA+GGG | + | chr5_2:47458799-47458818 | Msa0772960:intron | 50.0% | |
| GAGAGAGAGAGAATGCCGTA+AGG | + | chr5_2:47458849-47458868 | Msa0772960:intron | 50.0% | |
| TTCCCCAAGACTTCGTAGTC+CGG | + | chr5_2:47459195-47459214 | Msa0772960:intron | 50.0% | |
| CGGCTCCATCACTGAGTATT+TGG | + | chr5_2:47459215-47459234 | Msa0772960:intron | 50.0% | |
| GAGAGAGAGAGAATGCCGTA+AGG | + | chr5_2:47458849-47458868 | Msa0772960:intron | 50.0% | |
| TTCCCCAAGACTTCGTAGTC+CGG | + | chr5_2:47459195-47459214 | Msa0772960:intron | 50.0% | |
| CGGCTCCATCACTGAGTATT+TGG | + | chr5_2:47459215-47459234 | Msa0772960:intron | 50.0% | |
| TGCTAAGTCAGGACCCAACT+TGG | + | chr5_2:47460202-47460221 | Msa0772960:intron | 50.0% | |
| TCTTCTTCGGCAAGCACACA+TGG | + | chr5_2:47460387-47460406 | Msa0772960:CDS | 50.0% | |
| CTTCTTCGGCAAGCACACAT+GGG | + | chr5_2:47460388-47460407 | Msa0772960:CDS | 50.0% | |
| TTCTTCGGCAAGCACACATG+GGG | + | chr5_2:47460389-47460408 | Msa0772960:CDS | 50.0% | |
| AAGCTGCTGTCAATGTGGAG+CGG | + | chr5_2:47460513-47460532 | Msa0772960:CDS | 50.0% | |
| TGACACCCTCAGTTTGAAGG+GGG | - | chr5_2:47460904-47460923 | None:intergenic | 50.0% | |
| GTGACACCCTCAGTTTGAAG+GGG | - | chr5_2:47460905-47460924 | None:intergenic | 50.0% | |
| GGGCTAGAGAAACTGCACTA+AGG | + | chr5_2:47461108-47461127 | Msa0772960:intron | 50.0% | |
| GGAAACAAACACTAGTGGCC+AGG | - | chr5_2:47461253-47461272 | None:intergenic | 50.0% | |
| !! | ATTTGGTGTCTTGGTGGGCA+AGG | - | chr5_2:47461274-47461293 | None:intergenic | 50.0% |
| GCCCACCAAGACACCAAATT+AGG | + | chr5_2:47461275-47461294 | Msa0772960:intron | 50.0% | |
| !! | CCGGGTTTTGTGATGCTGAT+TGG | - | chr5_2:47461353-47461372 | None:intergenic | 50.0% |
| CAAAACCCGGTGATTGCAAG+TGG | + | chr5_2:47461363-47461382 | Msa0772960:intron | 50.0% | |
| ACTGAGCCACTTGCAATCAC+CGG | - | chr5_2:47461372-47461391 | None:intergenic | 50.0% | |
| TGCAAGTGGCTCAGTAGTAC+TGG | + | chr5_2:47461377-47461396 | Msa0772960:intron | 50.0% | |
| TTACAAGGGACCCTGCATCA+TGG | - | chr5_2:47461420-47461439 | None:intergenic | 50.0% | |
| GTTTCTATCTGCACCTCAGG+AGG | - | chr5_2:47461478-47461497 | None:intergenic | 50.0% | |
| !! | AACTTGGTGCTGGATGCCAT+TGG | + | chr5_2:47461618-47461637 | Msa0772960:intron | 50.0% |
| GAGGTTCATCACTCTCCATC+AGG | - | chr5_2:47461726-47461745 | None:intergenic | 50.0% | |
| TGAAACAAGCCCCTAGAGCT+TGG | - | chr5_2:47461972-47461991 | None:intergenic | 50.0% | |
| GTATATATGGAGCAGCCTCC+TGG | - | chr5_2:47462050-47462069 | None:intergenic | 50.0% | |
| TAACCTCGACAGAGCTGAAG+AGG | + | chr5_2:47462568-47462587 | Msa0772960:CDS | 50.0% | |
| CACCCCTACGATTCTTACCT+TGG | - | chr5_2:47462803-47462822 | None:intergenic | 50.0% | |
| ! | AGAATCGTAGGGGTGTGTTG+AGG | + | chr5_2:47462808-47462827 | Msa0772960:intron | 50.0% |
| AAGTAGCTCGATGGCGAAGA+AGG | + | chr5_2:47462928-47462947 | Msa0772960:CDS | 50.0% | |
| GACTCTGTTCCTGCTGAGAT+TGG | + | chr5_2:47464402-47464421 | Msa0772960:intron | 50.0% | |
| ! | TTGGTGGGTGTTTGCCGAAT+CGG | + | chr5_2:47464451-47464470 | Msa0772960:intron | 50.0% |
| CTTATAGGAGCCAAGTGCAC+TGG | - | chr5_2:47465135-47465154 | None:intergenic | 50.0% | |
| CAGTGCACTTGGCTCCTATA+AGG | + | chr5_2:47465133-47465152 | Msa0772960:intron | 50.0% | |
| ! | TGTTCTTTAGGAAGGGGACC+TGG | - | chr5_2:47465803-47465822 | None:intergenic | 50.0% |
| AACATGCGAATGGTCTCCCT+GGG | + | chr5_2:47465921-47465940 | Msa0772960:CDS | 50.0% | |
| ! | GAAGCATCCTTCACACCAGA+AGG | - | chr5_2:47466087-47466106 | None:intergenic | 50.0% |
| TGGATGTAAACTCCCCCCTT+TGG | - | chr5_2:47466367-47466386 | None:intergenic | 50.0% | |
| ! | GGAGTGAAGTGTTCTGATCG+TGG | - | chr5_2:47466534-47466553 | None:intergenic | 50.0% |
| ATGAAGCTGAAGAACGAGCG+AGG | + | chr5_2:47466831-47466850 | Msa0772960:CDS | 50.0% | |
| TGAAGCTGAAGAACGAGCGA+GGG | + | chr5_2:47466832-47466851 | Msa0772960:CDS | 50.0% | |
| ! | TGTACTTTAGGAAGGGGACC+TGG | - | chr5_2:47468622-47468641 | None:intergenic | 50.0% |
| CAACGGTTGCATCTTGCTGA+AGG | - | chr5_2:47468698-47468717 | None:intergenic | 50.0% | |
| GTTCAATCCGAGGAGACCAT+TGG | - | chr5_2:47468754-47468773 | None:intergenic | 50.0% | |
| TGGGATTCTCGTTCAATCCG+AGG | - | chr5_2:47468764-47468783 | None:intergenic | 50.0% | |
| !! | TTTTTGGTCACCTGTGAGCC+GGG | + | chr5_2:47468806-47468825 | Msa0772960:CDS | 50.0% |
| ! | ACCTGTGAGCCGGGTATTTT+TGG | + | chr5_2:47468815-47468834 | Msa0772960:CDS | 50.0% |
| TCCAAAAATACCCGGCTCAC+AGG | - | chr5_2:47468819-47468838 | None:intergenic | 50.0% | |
| ! | TGGTCCTTCTGAAGAGGAAG+TGG | + | chr5_2:47468910-47468929 | Msa0772960:CDS | 50.0% |
| CGTTCCACTTCCTCTTCAGA+AGG | - | chr5_2:47468917-47468936 | None:intergenic | 50.0% | |
| GGTGGAAGTGAGAGCTGTAG+AGG | - | chr5_2:47457381-47457400 | None:intergenic | 55.0% | |
| !! | AAGAGACATGGTGGTGGTGG+TGG | - | chr5_2:47457436-47457455 | None:intergenic | 55.0% |
| ATTTCCGGGGGGAAGAGACA+TGG | - | chr5_2:47457448-47457467 | None:intergenic | 55.0% | |
| TCGAGGGTTTGGGAGGAGAT+GGG | - | chr5_2:47457514-47457533 | None:intergenic | 55.0% | |
| CTTGATGTCGAGGGTTTGGG+AGG | - | chr5_2:47457521-47457540 | None:intergenic | 55.0% | |
| TGAAGCGTGTGTGAATGCGC+TGG | + | chr5_2:47457736-47457755 | Msa0772960:five_prime_UTR | 55.0% | |
| GGCGGAGTGTGAGAATCTGT+TGG | + | chr5_2:47457796-47457815 | Msa0772960:five_prime_UTR | 55.0% | |
| AGCTGAAGAACAAGCGAGGG+AGG | + | chr5_2:47457895-47457914 | Msa0772960:five_prime_UTR | 55.0% | |
| GTGTTTGCGAGCTGAGGAGT+TGG | + | chr5_2:47457919-47457938 | Msa0772960:five_prime_UTR | 55.0% | |
| TGAGGGGAAGGAAAGGGAAG+AGG | + | chr5_2:47458558-47458577 | Msa0772960:intron | 55.0% | |
| AGCCGGACTACGAAGTCTTG+GGG | - | chr5_2:47459200-47459219 | None:intergenic | 55.0% | |
| GAGCCGGACTACGAAGTCTT+GGG | - | chr5_2:47459201-47459220 | None:intergenic | 55.0% | |
| AGCCGGACTACGAAGTCTTG+GGG | - | chr5_2:47459200-47459219 | None:intergenic | 55.0% | |
| GAGCCGGACTACGAAGTCTT+GGG | - | chr5_2:47459201-47459220 | None:intergenic | 55.0% | |
| AGCTGCTGTCAATGTGGAGC+GGG | + | chr5_2:47460514-47460533 | Msa0772960:CDS | 55.0% | |
| TCTGCCCACTGATCTTGAGC+AGG | + | chr5_2:47460987-47461006 | Msa0772960:intron | 55.0% | |
| GGTCATCAAGAAGGAGCTGC+TGG | - | chr5_2:47461024-47461043 | None:intergenic | 55.0% | |
| TCTGTATTCCGCCTCTGCAC+TGG | + | chr5_2:47461226-47461245 | Msa0772960:intron | 55.0% | |
| CTGAGCCACTTGCAATCACC+GGG | - | chr5_2:47461371-47461390 | None:intergenic | 55.0% | |
| !! | AGTGGCTCAGTAGTACTGGC+AGG | + | chr5_2:47461381-47461400 | Msa0772960:intron | 55.0% |
| GCTTTCCAGTGATCCTCCTG+AGG | + | chr5_2:47461462-47461481 | Msa0772960:intron | 55.0% | |
| TAAGCTACGCAAGGCCCCTA+TGG | - | chr5_2:47461997-47462016 | None:intergenic | 55.0% | |
| ACAGAGCTGAAGAGGAGGTG+AGG | + | chr5_2:47462576-47462595 | Msa0772960:intron | 55.0% | |
| TGTGCTGCCAGTTTCCTGAG+AGG | + | chr5_2:47464067-47464086 | Msa0772960:intron | 55.0% | |
| ! | TGGTGGGTGTTTGCCGAATC+GGG | + | chr5_2:47464452-47464471 | Msa0772960:intron | 55.0% |
| GTTTGCCGAATCGGGTGTGT+AGG | + | chr5_2:47464460-47464479 | Msa0772960:intron | 55.0% | |
| AAAGGGTGACCCAGTGCACT+TGG | + | chr5_2:47465122-47465141 | Msa0772960:intron | 55.0% | |
| GAACATGCGAATGGTCTCCC+TGG | + | chr5_2:47465920-47465939 | Msa0772960:CDS | 55.0% | |
| CGGGATTCTCGTTCAACCCA+GGG | - | chr5_2:47465940-47465959 | None:intergenic | 55.0% | |
| TCGGGATTCTCGTTCAACCC+AGG | - | chr5_2:47465941-47465960 | None:intergenic | 55.0% | |
| GAATGGCCCTTCTGGTGTGA+AGG | + | chr5_2:47466077-47466096 | Msa0772960:intron | 55.0% | |
| ! | CGAGAATGGCCCTTCTGAAG+AGG | + | chr5_2:47466147-47466166 | Msa0772960:CDS | 55.0% |
| ! | TGGCCCTTCTGAAGAGGAAG+TGG | + | chr5_2:47466153-47466172 | Msa0772960:CDS | 55.0% |
| GAACACGCCAATGGTCTCCT+CGG | + | chr5_2:47468744-47468763 | Msa0772960:intron | 55.0% | |
| GTGCATGTTGGGAAGTCGTC+AGG | - | chr5_2:47469013-47469032 | None:intergenic | 55.0% | |
| !! | CATGGTGGTGGTGGTGGTAG+CGG | - | chr5_2:47457430-47457449 | None:intergenic | 60.0% |
| !! | GGGAAGAGACATGGTGGTGG+TGG | - | chr5_2:47457439-47457458 | None:intergenic | 60.0% |
| ACCACCATGTCTCTTCCCCC+CGG | + | chr5_2:47457441-47457460 | Msa0772960:five_prime_UTR | 60.0% | |
| GTCGAGGGTTTGGGAGGAGA+TGG | - | chr5_2:47457515-47457534 | None:intergenic | 60.0% | |
| GGCGCGAAGCTTGATGTCGA+GGG | - | chr5_2:47457530-47457549 | None:intergenic | 60.0% | |
| AGGCGCGAAGCTTGATGTCG+AGG | - | chr5_2:47457531-47457550 | None:intergenic | 60.0% | |
| ! | GGAGCGAAGCGTTCTGATCG+TGG | - | chr5_2:47457576-47457595 | None:intergenic | 60.0% |
| AGGAATGGGGTCGTATGCGG+AGG | + | chr5_2:47458761-47458780 | Msa0772960:intron | 60.0% | |
| GGAGCCGGACTACGAAGTCT+TGG | - | chr5_2:47459202-47459221 | None:intergenic | 60.0% | |
| GGAGCCGGACTACGAAGTCT+TGG | - | chr5_2:47459202-47459221 | None:intergenic | 60.0% | |
| CTGTCAATGTGGAGCGGGTG+AGG | + | chr5_2:47460519-47460538 | Msa0772960:intron | 60.0% | |
| CTGCACCTCAGGAGGATCAC+TGG | - | chr5_2:47461470-47461489 | None:intergenic | 60.0% | |
| CCTCCTCTTCAGCTCTGTCG+AGG | - | chr5_2:47462574-47462593 | None:intergenic | 60.0% | |
| CCTCGACAGAGCTGAAGAGG+AGG | + | chr5_2:47462571-47462590 | Msa0772960:CDS | 60.0% | |
| AGCTGAAGAACGAGCGAGGG+AGG | + | chr5_2:47466835-47466854 | Msa0772960:CDS | 60.0% | |
| AAAGGGTGGCTCAGTGCACG+AGG | + | chr5_2:47467458-47467477 | Msa0772960:intron | 60.0% | |
| CAGTGCACGAGGCTCCCATA+AGG | + | chr5_2:47467469-47467488 | Msa0772960:intron | 60.0% | |
| GGGGGGAAGAGACATGGTGG+TGG | - | chr5_2:47457442-47457461 | None:intergenic | 65.0% | |
| TCCGGGGGGAAGAGACATGG+TGG | - | chr5_2:47457445-47457464 | None:intergenic | 65.0% | |
| ! | GGAGGCGTGTTTGCGAGCTG+AGG | + | chr5_2:47457913-47457932 | Msa0772960:five_prime_UTR | 65.0% |
| TTCCGCCTCTGCACTGGACC+TGG | + | chr5_2:47461232-47461251 | Msa0772960:intron | 65.0% | |
| AGTGGCCAGGTCCAGTGCAG+AGG | - | chr5_2:47461240-47461259 | None:intergenic | 65.0% | |
| GAGGCTCAAGGTAGCCAGCC+AGG | - | chr5_2:47468223-47468242 | None:intergenic | 65.0% | |
| GGCCAGGTCCAGTGCAGAGG+CGG | - | chr5_2:47461237-47461256 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 47457254 | 47469036 | 47457254 | ID=Msa0772960;Name=Msa0772960 |
| chr5_2 | mRNA | 47457254 | 47469036 | 47457254 | ID=Msa0772960-mRNA-1;Parent=Msa0772960;Name=Msa0772960-mRNA-1;_AED=0.23;_eAED=0.23;_QI=607|0.54|0.5|1|0.90|0.91|12|0|534 |
| chr5_2 | exon | 47457254 | 47457638 | 47457254 | ID=Msa0772960-mRNA-1:exon:14222;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47457734 | 47458000 | 47457734 | ID=Msa0772960-mRNA-1:exon:14223;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47460381 | 47460535 | 47460381 | ID=Msa0772960-mRNA-1:exon:14224;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47462487 | 47462592 | 47462487 | ID=Msa0772960-mRNA-1:exon:14225;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47462682 | 47462804 | 47462682 | ID=Msa0772960-mRNA-1:exon:14226;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47462899 | 47463015 | 47462899 | ID=Msa0772960-mRNA-1:exon:14227;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47465797 | 47466032 | 47465797 | ID=Msa0772960-mRNA-1:exon:14228;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47466141 | 47466392 | 47466141 | ID=Msa0772960-mRNA-1:exon:14229;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47466485 | 47466596 | 47466485 | ID=Msa0772960-mRNA-1:exon:14230;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47466830 | 47466964 | 47466830 | ID=Msa0772960-mRNA-1:exon:14231;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47468616 | 47468647 | 47468616 | ID=Msa0772960-mRNA-1:exon:14232;Parent=Msa0772960-mRNA-1 |
| chr5_2 | exon | 47468745 | 47469036 | 47468745 | ID=Msa0772960-mRNA-1:exon:14233;Parent=Msa0772960-mRNA-1 |
| chr5_2 | five_prime_UTR | 47457254 | 47457638 | 47457254 | ID=Msa0772960-mRNA-1:five_prime_utr;Parent=Msa0772960-mRNA-1 |
| chr5_2 | five_prime_UTR | 47457734 | 47457955 | 47457734 | ID=Msa0772960-mRNA-1:five_prime_utr;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47457956 | 47458000 | 47457956 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47460381 | 47460535 | 47460381 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47462487 | 47462592 | 47462487 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47462682 | 47462804 | 47462682 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47462899 | 47463015 | 47462899 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47465797 | 47466032 | 47465797 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47466141 | 47466392 | 47466141 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47466485 | 47466596 | 47466485 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47466830 | 47466964 | 47466830 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47468616 | 47468647 | 47468616 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| chr5_2 | CDS | 47468745 | 47469036 | 47468745 | ID=Msa0772960-mRNA-1:cds;Parent=Msa0772960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
