AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0285450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0285450 MtrunA17_Chr2g0301851 98.491 729 9 1 1 729 1 727 0.0 1489
Msa0285450 MtrunA17_Chr8g0345011 60.999 741 263 11 1 729 2 728 0.0 860
Msa0285450 MtrunA17_Chr8g0352941 53.368 193 78 4 1 192 2 183 5.32e-60 202
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0285450 AT3G43240.1 64.022 731 241 10 2 729 1 712 0.0 904

Find 171 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAAACCATTGTGCTTAAT+TGG 0.120497 2_3:-25216153 None:intergenic
ACATATCGATTTCGTATCTT+AGG 0.121783 2_3:+25210846 Msa0285450:five_prime_UTR
AAGTAAACTAATTGAGTTTA+AGG 0.130833 2_3:-25218428 None:intergenic
CTAATTCCTGGGTTTCTTAA+AGG 0.135464 2_3:+25211044 Msa0285450:five_prime_UTR
CATATATCACTCTTGGTTTC+TGG 0.157438 2_3:+25214368 Msa0285450:CDS
GAAGGATGTAATGCAATTTC+TGG 0.171195 2_3:+25216413 Msa0285450:CDS
ACTCACGGTATTAGGTAATT+TGG 0.204870 2_3:-25211797 None:intergenic
CCCTCAAAATATCCTGAAAA+AGG 0.204985 2_3:-25216084 None:intergenic
GTTAGGCGTTGCTAGTATTC+AGG 0.226328 2_3:+25215777 Msa0285450:CDS
TTAAAAGGATGCGTGCTTAT+TGG 0.242537 2_3:+25213148 Msa0285450:intron
CAAACAAAATTGAATTGAAT+TGG 0.243717 2_3:-25210714 None:intergenic
CCAATTAAGCACAATGGTTT+AGG 0.261786 2_3:+25216153 Msa0285450:CDS
GTCTTGACACACCCTGAAAA+TGG 0.263487 2_3:-25211242 None:intergenic
GAGTACCTTACACTATTTAC+TGG 0.275735 2_3:+25212157 Msa0285450:CDS
GCAAGGACTCGGAGCATTTA+AGG 0.276262 2_3:+25217650 Msa0285450:CDS
AGTCTTGTTAATTAGTGATT+TGG 0.276546 2_3:+25218293 Msa0285450:three_prime_UTR
TTCTTAGCAAAACTTCGATT+TGG 0.283092 2_3:+25210887 Msa0285450:five_prime_UTR
CTGGGTTGATTTGTAGTATT+GGG 0.287319 2_3:+25211101 Msa0285450:five_prime_UTR
TGTGGTGAGTGGGCTCATTT+TGG 0.301828 2_3:+25217615 Msa0285450:CDS
TTAACTCTAGAGCATGATTC+TGG 0.305574 2_3:-25215952 None:intergenic
CACCAAACACTCACGGTATT+AGG 0.305701 2_3:-25211805 None:intergenic
GGCAGAGGCACTACATTCTA+AGG 0.308299 2_3:+25211937 Msa0285450:CDS
TCTTAGCAAAACTTCGATTT+GGG 0.317494 2_3:+25210888 Msa0285450:five_prime_UTR
TTCCGGAACTTTCTTCGTTC+GGG 0.321766 2_3:+25211373 Msa0285450:CDS
ACCAAACATTAAAACTATTC+TGG 0.328063 2_3:-25210656 None:intergenic
TTCTCTAGAGAAAGAAATTC+AGG 0.329109 2_3:+25218379 Msa0285450:three_prime_UTR
AACTGCAAATGGTTATTAAC+AGG 0.332403 2_3:+25218150 Msa0285450:CDS
AATAATCCACACAAGGCTTC+CGG 0.335869 2_3:-25211769 None:intergenic
TAATTCCTGGGTTTCTTAAA+GGG 0.338325 2_3:+25211045 Msa0285450:five_prime_UTR
GCTAGAGAAAACAATATCTT+TGG 0.338685 2_3:-25215881 None:intergenic
TATTATTAATCAACAATATC+AGG 0.342433 2_3:+25217673 Msa0285450:CDS
AATACGAGATTTCTTCTTTG+TGG 0.345310 2_3:+25212999 Msa0285450:CDS
TTTCCGGAACTTTCTTCGTT+CGG 0.347309 2_3:+25211372 Msa0285450:CDS
GAAATTGCATTACATCCTTC+AGG 0.347475 2_3:-25216410 None:intergenic
CAAGAGGAGGCTTTCATGTT+GGG 0.358461 2_3:+25216631 Msa0285450:CDS
AGTCTTCTTGCTGTTCTTAG+TGG 0.359874 2_3:+25211270 Msa0285450:CDS
ATAATCCACACAAGGCTTCC+GGG 0.375399 2_3:-25211768 None:intergenic
TTCTGCTCATATATCACTCT+TGG 0.375957 2_3:+25214361 Msa0285450:CDS
CTGGACAAGTTGACTATTCT+CGG 0.378507 2_3:-25214542 None:intergenic
CATGGACCAACTTCAATGTT+AGG 0.379866 2_3:-25212900 None:intergenic
GTAGTATTGGGAAGTTGTTT+TGG 0.379941 2_3:+25211113 Msa0285450:five_prime_UTR
TCTGGGTTGATTTGTAGTAT+TGG 0.384513 2_3:+25211100 Msa0285450:five_prime_UTR
TTAGCATTCAGAACGGCATC+AGG 0.387346 2_3:-25216486 None:intergenic
TTCTGTGCTTGATCCTCAAT+TGG 0.387951 2_3:+25218238 Msa0285450:CDS
ATTGGTAAAGGTAGGTTTGT+AGG 0.388619 2_3:+25218256 Msa0285450:CDS
ACAGTAGCGCAGCAGGTGAC+TGG 0.395006 2_3:+25217577 Msa0285450:intron
GTGGATTCAAAGATATTATC+TGG 0.397675 2_3:-25216227 None:intergenic
TTAGATGATAGTGGAGAAAT+CGG 0.401326 2_3:+25211712 Msa0285450:CDS
ACCTCTGAGCAAACTCGTAT+TGG 0.406911 2_3:-25216282 None:intergenic
GTGCTTATTGGAGTCATTAG+AGG 0.416010 2_3:+25213160 Msa0285450:CDS
ACGAAGAAAGTTCCGGAAAC+GGG 0.417940 2_3:-25211368 None:intergenic
TTCTTCGTTCGGGCGACTTG+AGG 0.424131 2_3:+25211383 Msa0285450:CDS
CATATCGATTTCGTATCTTA+GGG 0.427252 2_3:+25210847 Msa0285450:five_prime_UTR
AACGAAGAAAGTTCCGGAAA+CGG 0.427488 2_3:-25211369 None:intergenic
AAACAAAATTGAATTGAATT+GGG 0.431061 2_3:-25210713 None:intergenic
TGGCGATGAGACTGAGGGAT+TGG 0.441828 2_3:-25216051 None:intergenic
AAACCTACCTTTACCAATTG+AGG 0.447186 2_3:-25218251 None:intergenic
ATGTTGGGAATGGTATCAAT+TGG 0.448776 2_3:+25216646 Msa0285450:CDS
AGACGCTTGTTTCAATGATC+AGG 0.449178 2_3:+25214397 Msa0285450:CDS
TTTGTATGCGTGTTCCTACA+TGG 0.452207 2_3:+25214653 Msa0285450:CDS
GGTTTATTTGGAAACTCCTA+AGG 0.454681 2_3:+25211904 Msa0285450:intron
CCTTGCAAGTAAACAAAATC+CGG 0.457763 2_3:-25211682 None:intergenic
CGCCCGAACGAAGAAAGTTC+CGG 0.466593 2_3:-25211375 None:intergenic
TTAGGCGTTGCTAGTATTCA+GGG 0.466983 2_3:+25215778 Msa0285450:CDS
TTGAAGATAATGGCAGTGAT+AGG 0.469399 2_3:+25216001 Msa0285450:CDS
ATCCAAGCCTACCACTGTGC+AGG 0.475502 2_3:-25213027 None:intergenic
GTTCATGGCTAGGAATTGCC+TGG 0.478110 2_3:-25214561 None:intergenic
TCCTTCGTGTCTGCTTCACA+TGG 0.479727 2_3:-25212918 None:intergenic
AGGCAGCGGTACGACACATT+AGG 0.481904 2_3:-25215748 None:intergenic
CGTTCTGAATGCTAAACGTC+TGG 0.484571 2_3:+25216494 Msa0285450:CDS
TTTCCTAGAGCCAATGTACA+TGG 0.486337 2_3:+25218190 Msa0285450:CDS
CAGAAGGGCAGCGGTAAGCC+TGG 0.488329 2_3:+25212855 Msa0285450:CDS
GTTGGAAAGCATCCCATGTA+TGG 0.489682 2_3:-25212773 None:intergenic
CGAGCAAGTTCATCGAAAGT+AGG 0.491578 2_3:-25211640 None:intergenic
TGTGATAGGCGGCAAGGACT+CGG 0.492876 2_3:+25217639 Msa0285450:CDS
ATGCAATTTCTGGTTCTTCG+AGG 0.493393 2_3:+25216423 Msa0285450:CDS
ACGAGAATCAGTGACCCATT+TGG 0.495130 2_3:-25210966 None:intergenic
TCTAGAGCATGATTCTGGTT+CGG 0.495832 2_3:-25215947 None:intergenic
AAATCGCAGAAAACTGCAAA+TGG 0.497504 2_3:+25218139 Msa0285450:CDS
ACAAGGCTTCCGGGGTAGAC+AGG 0.498979 2_3:-25211759 None:intergenic
TGTTCCTACATGGGCTTCAC+AGG 0.500006 2_3:+25214663 Msa0285450:CDS
CTGTGGTATGTGTGGTGAGT+GGG 0.501449 2_3:+25217605 Msa0285450:CDS
CTACGCGAAAACTGATGGGC+TGG 0.502485 2_3:+25218075 Msa0285450:CDS
GGGGATGTAAACTTCAAAAT+CGG 0.503125 2_3:+25214120 Msa0285450:CDS
GGTCAGCAGTTAGATGATAG+TGG 0.504243 2_3:+25211703 Msa0285450:CDS
TGAAGCAGACACGAAGGAAG+AGG 0.507245 2_3:+25212923 Msa0285450:CDS
TCAAGAGGAGGCTTTCATGT+TGG 0.508202 2_3:+25216630 Msa0285450:CDS
TTTATAGAAGAACTAGTCTC+AGG 0.513374 2_3:-25212957 None:intergenic
GTCAACAACAGTAGCGCAGC+AGG 0.516609 2_3:+25217570 Msa0285450:intron
ATAATCCAACAAAATAAAGT+TGG 0.517042 2_3:-25217733 None:intergenic
CAGGACTACGCGAAAACTGA+TGG 0.518231 2_3:+25218070 Msa0285450:intron
TACCGCTGCCTAGTTATGTT+AGG 0.522097 2_3:+25215760 Msa0285450:CDS
GCTGCTTGGAGAGGAGGTGG+TGG 0.523024 2_3:-25214287 None:intergenic
TGCAATTTCTGGTTCTTCGA+GGG 0.523821 2_3:+25216424 Msa0285450:CDS
CGAGAATAGTCAACTTGTCC+AGG 0.524411 2_3:+25214543 Msa0285450:CDS
ACAAAAGCAGAAGCAGAAGC+AGG 0.527969 2_3:+25211311 Msa0285450:CDS
GATCTTCGAGGCTCGTATGA+AGG 0.532815 2_3:-25214595 None:intergenic
GAAAGCATCCCATGTATGGC+TGG 0.537247 2_3:-25212769 None:intergenic
TAGCAACGCCTAACATAACT+AGG 0.538395 2_3:-25215768 None:intergenic
TTGTATGCGTGTTCCTACAT+GGG 0.540688 2_3:+25214654 Msa0285450:CDS
TTAGCTCATGATGATGTAGA+TGG 0.541719 2_3:+25217438 Msa0285450:CDS
GTAGTACATCCAGCCATACA+TGG 0.542147 2_3:+25212760 Msa0285450:intron
AATGCTGCTTATTGTGTCAC+AGG 0.542245 2_3:+25217463 Msa0285450:CDS
TTCAAACACACTAGATCCAC+AGG 0.544026 2_3:-25214629 None:intergenic
AGTTCTAGAACAACTGCAGC+CGG 0.546683 2_3:+25211663 Msa0285450:CDS
GCTACTGAAGCTGATCTTCG+AGG 0.548233 2_3:-25214607 None:intergenic
GGAGGCTTTCATGTTGGGAA+TGG 0.550648 2_3:+25216636 Msa0285450:CDS
GAACCTCCTAACATTGAAGT+TGG 0.554306 2_3:+25212894 Msa0285450:CDS
CAAGGCCACCTTGTGGAATG+AGG 0.556124 2_3:-25216455 None:intergenic
CTTGTTTCAATGATCAGGCA+CGG 0.556320 2_3:+25214402 Msa0285450:CDS
GTTGCTGCTTGGAGAGGAGG+TGG 0.556794 2_3:-25214290 None:intergenic
CAGTAGCGCAGCAGGTGACT+GGG 0.557484 2_3:+25217578 Msa0285450:intron
GCTTGATCCTCAATTGGTAA+AGG 0.557537 2_3:+25218244 Msa0285450:CDS
TAAAAGATGACTGAGCAAGT+TGG 0.561412 2_3:-25212791 None:intergenic
TTGTTTCAATGATCAGGCAC+GGG 0.562754 2_3:+25214403 Msa0285450:CDS
GCAGGATGATGATGCTTCTG+AGG 0.573214 2_3:+25211329 Msa0285450:CDS
CGGCATCAGGGAACTCAGCA+AGG 0.574376 2_3:-25216473 None:intergenic
ACAAACTTACTTCAGTACAT+AGG 0.576760 2_3:-25213199 None:intergenic
GGCGTGAAAGTTGAAGATAA+TGG 0.577013 2_3:+25215991 Msa0285450:CDS
TTAACACTAGCCATGTACAT+TGG 0.578866 2_3:-25218200 None:intergenic
CTTAGCAAAACTTCGATTTG+GGG 0.580554 2_3:+25210889 Msa0285450:five_prime_UTR
AACAAAATAAAGTTGGCAGA+AGG 0.580605 2_3:-25217726 None:intergenic
TGCGTGAGAATGTTGCTGCT+TGG 0.581290 2_3:-25214301 None:intergenic
TCCAAGCCTACCACTGTGCA+GGG 0.581847 2_3:-25213026 None:intergenic
TTTGGTTGTGATAGGCGGCA+AGG 0.582920 2_3:+25217633 Msa0285450:CDS
GATCCTCAATTGGTAAAGGT+AGG 0.585308 2_3:+25218248 Msa0285450:CDS
AATGTTGCTGCTTGGAGAGG+AGG 0.594965 2_3:-25214293 None:intergenic
GCTGGAGGCATCAACCAACT+AGG 0.596103 2_3:-25215907 None:intergenic
ACTGTGGTATGTGTGGTGAG+TGG 0.596504 2_3:+25217604 Msa0285450:CDS
TAGCCATGTACATTGGCTCT+AGG 0.598362 2_3:-25218193 None:intergenic
TCTACCCCGGAAGCCTTGTG+TGG 0.602418 2_3:+25211763 Msa0285450:CDS
AGGACTACGCGAAAACTGAT+GGG 0.603153 2_3:+25218071 Msa0285450:intron
CGCCTAACATAACTAGGCAG+CGG 0.603194 2_3:-25215762 None:intergenic
CATGTTCCAATTAAGCACAA+TGG 0.605715 2_3:+25216147 Msa0285450:CDS
TAGATGATAGTGGAGAAATC+GGG 0.606612 2_3:+25211713 Msa0285450:CDS
GGGAATGGTATCAATTGGAA+AGG 0.606924 2_3:+25216651 Msa0285450:CDS
TAATCCACACAAGGCTTCCG+GGG 0.610738 2_3:-25211767 None:intergenic
CGTGGATATATCACAGCGCA+TGG 0.614411 2_3:-25214333 None:intergenic
GTTAAATCTATCAATGCTAG+TGG 0.615417 2_3:+25215970 Msa0285450:CDS
GGACCAACTTCAATGTTAGG+AGG 0.616126 2_3:-25212897 None:intergenic
GAGGCATCAACCAACTAGGA+TGG 0.619735 2_3:-25215903 None:intergenic
CATACCTCACAACAGTCAGA+AGG 0.629474 2_3:+25212839 Msa0285450:CDS
CACAACAGTCAGAAGGGCAG+CGG 0.630640 2_3:+25212846 Msa0285450:CDS
TTTCTGTTTGTAACTGAACG+AGG 0.636062 2_3:-25216177 None:intergenic
TGGGTGAACTGTGGTATGTG+TGG 0.638192 2_3:+25217597 Msa0285450:CDS
TTATTGGAGTCATTAGAGGA+TGG 0.641905 2_3:+25213164 Msa0285450:CDS
GCATTGGGGTGAAACAGTAG+AGG 0.643928 2_3:+25211168 Msa0285450:five_prime_UTR
AACTCAGCAAGGCCACCTTG+TGG 0.644829 2_3:-25216462 None:intergenic
GTAAACTTCAAAATCGGACG+AGG 0.646275 2_3:+25214126 Msa0285450:CDS
GTTTATTTGGAAACTCCTAA+GGG 0.646559 2_3:+25211905 Msa0285450:CDS
GAGAATGTTGCTGCTTGGAG+AGG 0.646813 2_3:-25214296 None:intergenic
TAGCATTCAGAACGGCATCA+GGG 0.648273 2_3:-25216485 None:intergenic
TAGTACATCCAGCCATACAT+GGG 0.649585 2_3:+25212761 Msa0285450:intron
CTGCCCTTCTGACTGTTGTG+AGG 0.649813 2_3:-25212843 None:intergenic
AGATCAGCTTCAGTAGCCTG+TGG 0.650358 2_3:+25214613 Msa0285450:CDS
ATACCTCACAACAGTCAGAA+GGG 0.652494 2_3:+25212840 Msa0285450:CDS
TTAACCTGTGAAGCCCATGT+AGG 0.655672 2_3:-25214667 None:intergenic
TTGTGCTTAATTGGAACATG+AGG 0.656277 2_3:-25216144 None:intergenic
GGAAGAAAATAATCCACACA+AGG 0.664859 2_3:-25211776 None:intergenic
CAGACGTTTAGCATTCAGAA+CGG 0.667993 2_3:-25216493 None:intergenic
CATACTCGCCTCATTCCACA+AGG 0.680159 2_3:+25216447 Msa0285450:CDS
AGCAACATTCTCACGCAGCG+TGG 0.682119 2_3:+25214307 Msa0285450:CDS
TTGTGGATTTCCCTGCACAG+TGG 0.689802 2_3:+25213016 Msa0285450:CDS
TCCAATACGAGTTTGCTCAG+AGG 0.694110 2_3:+25216281 Msa0285450:CDS
ACTATACTGTGTGCAAAACG+AGG 0.696352 2_3:+25212815 Msa0285450:CDS
TCCATGTGAAGCAGACACGA+AGG 0.700858 2_3:+25212917 Msa0285450:CDS
GTGACAGGAGGAATTCCTGA+AGG 0.703165 2_3:+25216395 Msa0285450:intron
ACTCGCCTCATTCCACAAGG+TGG 0.716807 2_3:+25216450 Msa0285450:CDS
TATATGAGCAGAACTAGACG+TGG 0.718027 2_3:-25214351 None:intergenic
AAATTTGACATGCTGCAGTG+TGG 0.731876 2_3:-25218109 None:intergenic
GCAGGTGACTGGGTGAACTG+TGG 0.732040 2_3:+25217588 Msa0285450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCAATCTTATAAAT+TGG + chr2_3:25210802-25210821 Msa0285450:five_prime_UTR 10.0%
!!! TTTTTTCAATCTTATAAATT+GGG + chr2_3:25210803-25210822 Msa0285450:five_prime_UTR 10.0%
!!! TTTTGTTTTTATTTGTTTTA+AGG + chr2_3:25211550-25211569 Msa0285450:intron 10.0%
!!! AAAATTTTACTTAATTCTAA+TGG - chr2_3:25211582-25211601 None:intergenic 10.0%
!! AAACAAAATTGAATTGAATT+GGG - chr2_3:25210716-25210735 None:intergenic 15.0%
!! TAACAAAAACATATAATGTA+AGG - chr2_3:25212097-25212116 None:intergenic 15.0%
!!! TTACATTATATGTTTTTGTT+AGG + chr2_3:25212096-25212115 Msa0285450:intron 15.0%
!!! TACAATTTTTTGTCAAATAA+CGG + chr2_3:25212398-25212417 Msa0285450:intron 15.0%
!!! TAATTGTTTTTTCTTTCTTA+AGG + chr2_3:25214687-25214706 Msa0285450:intron 15.0%
!! TTATAATAATAAAGTTCTGT+AGG + chr2_3:25215441-25215460 Msa0285450:intron 15.0%
!! TATAATAATAAAGTTCTGTA+GGG + chr2_3:25215442-25215461 Msa0285450:intron 15.0%
!! TATATATGTTAGATACTTTA+TGG + chr2_3:25215523-25215542 Msa0285450:intron 15.0%
!!! TAAATTGTACCTTTTATTTA+TGG + chr2_3:25215631-25215650 Msa0285450:intron 15.0%
!! TATTATTAATCAACAATATC+AGG + chr2_3:25217673-25217692 Msa0285450:CDS 15.0%
!! CAAACAAAATTGAATTGAAT+TGG - chr2_3:25210717-25210736 None:intergenic 20.0%
!!! ATTCAATTCAATTTTGTTTG+TGG + chr2_3:25210717-25210736 Msa0285450:five_prime_UTR 20.0%
!!! TATAAATTGGGTTTTTAGTT+TGG + chr2_3:25210815-25210834 Msa0285450:five_prime_UTR 20.0%
!!! AAAGCTAAAACTTTGATTTT+TGG + chr2_3:25211071-25211090 Msa0285450:five_prime_UTR 20.0%
!!! TTACTTCATGATATTTTTGT+AGG + chr2_3:25211883-25211902 Msa0285450:intron 20.0%
!!! GATATTTTTGTAGGTTTATT+TGG + chr2_3:25211892-25211911 Msa0285450:intron 20.0%
!! GAGTATAATTAATGAGATTA+AGG + chr2_3:25212034-25212053 Msa0285450:intron 20.0%
!!! TTTTTAAATATTACTGTTCC+TGG + chr2_3:25212278-25212297 Msa0285450:intron 20.0%
!! ACAATTGTAGTAATTGTTAT+AGG + chr2_3:25213323-25213342 Msa0285450:intron 20.0%
!! TGTAATCAATGTATTACTTA+AGG + chr2_3:25213463-25213482 Msa0285450:intron 20.0%
!! CATTATGTTTGTTCATAATT+GGG + chr2_3:25213519-25213538 Msa0285450:intron 20.0%
!! TATTTCCTTAAATCATTGAA+CGG + chr2_3:25213619-25213638 Msa0285450:intron 20.0%
!!! GTTTTTGTTATAGTTTTTCT+AGG - chr2_3:25213863-25213882 None:intergenic 20.0%
!! AACAATCACTTAAATTATGA+GGG - chr2_3:25214025-25214044 None:intergenic 20.0%
!! AAACAATCACTTAAATTATG+AGG - chr2_3:25214026-25214045 None:intergenic 20.0%
!! TCAATACATATAATTAAGTC+TGG + chr2_3:25215142-25215161 Msa0285450:intron 20.0%
!!! TTTTTACCAGCTATTTTTAA+TGG - chr2_3:25215406-25215425 None:intergenic 20.0%
!! ATGCAATGAAATGTTTATTA+AGG - chr2_3:25216757-25216776 None:intergenic 20.0%
!! TTTCCTAAAAGTAAAATTCT+AGG - chr2_3:25216823-25216842 None:intergenic 20.0%
!! ACATAAAATCATACTAAACT+AGG - chr2_3:25216980-25216999 None:intergenic 20.0%
!! CAAACTTTATGAATAAATTG+AGG + chr2_3:25217268-25217287 Msa0285450:intron 20.0%
!!! ATTGTGAAAATGATACTTTT+GGG + chr2_3:25217310-25217329 Msa0285450:intron 20.0%
!! ATTTCCATAATATTGTATAC+AGG - chr2_3:25217339-25217358 None:intergenic 20.0%
!! ATAATCCAACAAAATAAAGT+TGG - chr2_3:25217736-25217755 None:intergenic 20.0%
!! TATGAAATGAAACTGATAAA+AGG + chr2_3:25217792-25217811 Msa0285450:intron 20.0%
!! AAGTAAACTAATTGAGTTTA+AGG - chr2_3:25218431-25218450 None:intergenic 20.0%
!!! CGTACATTTTTGATTTGATT+TGG - chr2_3:25210634-25210653 None:intergenic 25.0%
!!! ACCAGAATAGTTTTAATGTT+TGG + chr2_3:25210655-25210674 Msa0285450:five_prime_UTR 25.0%
! ACCAAACATTAAAACTATTC+TGG - chr2_3:25210659-25210678 None:intergenic 25.0%
!!! TTTTGCTTTTTTCTAATTCC+TGG + chr2_3:25211032-25211051 Msa0285450:five_prime_UTR 25.0%
!!! TTTGCTTTTTTCTAATTCCT+GGG + chr2_3:25211033-25211052 Msa0285450:five_prime_UTR 25.0%
!!! TTTGATTTTTGGTTTCTTTC+TGG + chr2_3:25211082-25211101 Msa0285450:five_prime_UTR 25.0%
!!! TTGATTTTTGGTTTCTTTCT+GGG + chr2_3:25211083-25211102 Msa0285450:five_prime_UTR 25.0%
!! ATATATGATGTTCCATTTTC+AGG + chr2_3:25211230-25211249 Msa0285450:exon 25.0%
!! TATATGATGTTCCATTTTCA+GGG + chr2_3:25211231-25211250 Msa0285450:exon 25.0%
!!! ACTACATTCTAAGGTTATAT+TGG + chr2_3:25211946-25211965 Msa0285450:intron 25.0%
!! AAGACAATCTATACTTCTTT+TGG + chr2_3:25211973-25211992 Msa0285450:intron 25.0%
!! AGACAATCTATACTTCTTTT+GGG + chr2_3:25211974-25211993 Msa0285450:intron 25.0%
!! TTTTTCCAGTAAATAGTGTA+AGG - chr2_3:25212165-25212184 None:intergenic 25.0%
! TTGTACTAAATAGCATATCA+TGG - chr2_3:25212383-25212402 None:intergenic 25.0%
! AAAAACACTATTCGAGAAAT+AGG - chr2_3:25212714-25212733 None:intergenic 25.0%
!!! GTGTTTTTGTTTATGATAGT+TGG + chr2_3:25212726-25212745 Msa0285450:intron 25.0%
! TTGTAATAGTTCTTACAATG+TGG + chr2_3:25213084-25213103 Msa0285450:intron 25.0%
! GAAATAAATCAGTCTATAAC+AGG - chr2_3:25213114-25213133 None:intergenic 25.0%
!! CATCTCTATTTTCTCTTAAA+AGG + chr2_3:25213133-25213152 Msa0285450:intron 25.0%
!!! AATTGTTATAGGTTAGTTTG+TGG + chr2_3:25213334-25213353 Msa0285450:intron 25.0%
! CCAATTATGAACAAACATAA+TGG - chr2_3:25213521-25213540 None:intergenic 25.0%
! CCATTATGTTTGTTCATAAT+TGG + chr2_3:25213518-25213537 Msa0285450:intron 25.0%
!!! TAGTAAAGATGATGGAAAAT+AGG + chr2_3:25213782-25213801 Msa0285450:intron 25.0%
! AGATTTAGAGATTAATGAGT+TGG + chr2_3:25213892-25213911 Msa0285450:intron 25.0%
!! TAATGAGTTGGATCAAAATA+TGG + chr2_3:25213904-25213923 Msa0285450:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr2_3:25213924-25213943 Msa0285450:intron 25.0%
! ATAACATTGTAGGTAAAAGA+TGG - chr2_3:25214224-25214243 None:intergenic 25.0%
! AACAAACAGAATAACATTGT+AGG - chr2_3:25214234-25214253 None:intergenic 25.0%
!!! AAGGTAGTTTATTTTGTTCA+TGG - chr2_3:25214579-25214598 None:intergenic 25.0%
!!! AATAGTTTTGACCAATCAAA+TGG + chr2_3:25214761-25214780 Msa0285450:intron 25.0%
! TTTCAACTAAACCATTTGAT+TGG - chr2_3:25214775-25214794 None:intergenic 25.0%
! GATGATAAAATAATGCTACA+AGG + chr2_3:25214948-25214967 Msa0285450:intron 25.0%
! TTTGCAATTTCATGAATGAA+AGG + chr2_3:25214971-25214990 Msa0285450:intron 25.0%
! AACTTTCCATTAAAAATAGC+TGG + chr2_3:25215397-25215416 Msa0285450:intron 25.0%
! TCATTGTAGCCATAAATAAA+AGG - chr2_3:25215643-25215662 None:intergenic 25.0%
! AAAAAAAAGTCCATGAAGTA+TGG - chr2_3:25215667-25215686 None:intergenic 25.0%
!!! TTTTTTCATTAATGGCTTCT+TGG + chr2_3:25215694-25215713 Msa0285450:intron 25.0%
!! GTCTTCTTTTCTTTTGTAAT+CGG + chr2_3:25215839-25215858 Msa0285450:CDS 25.0%
! AAGGTCAACAAAAACATATA+CGG - chr2_3:25216313-25216332 None:intergenic 25.0%
!!! TCTTTTTAACTTGTATAGAG+AGG + chr2_3:25216518-25216537 Msa0285450:CDS 25.0%
!! CTAAGAAACTTGAGTATTTT+AGG + chr2_3:25216602-25216621 Msa0285450:intron 25.0%
!!! TAGCCTAGAATTTTACTTTT+AGG + chr2_3:25216817-25216836 Msa0285450:intron 25.0%
! CTCAAAATGTAAGATTATCT+AGG - chr2_3:25216867-25216886 None:intergenic 25.0%
! TTAGTAATCCATTCCTTATT+AGG + chr2_3:25216905-25216924 Msa0285450:intron 25.0%
! AAAGTACAAGATTCCTAATA+AGG - chr2_3:25216921-25216940 None:intergenic 25.0%
!! CATTGTGAAAATGATACTTT+TGG + chr2_3:25217309-25217328 Msa0285450:intron 25.0%
!!! TAATTTCTTTTTGCTGTTGT+AGG + chr2_3:25217362-25217381 Msa0285450:intron 25.0%
!!! AATTTCTTTTTGCTGTTGTA+GGG + chr2_3:25217363-25217382 Msa0285450:intron 25.0%
! TGTTGGATTATGATCAATAT+AGG + chr2_3:25217745-25217764 Msa0285450:intron 25.0%
!!! GCTGTTTTCTTAAACTATAT+TGG + chr2_3:25217914-25217933 Msa0285450:intron 25.0%
!! TTTTCACCCTTTATTATGAA+TGG + chr2_3:25218047-25218066 Msa0285450:intron 25.0%
!!! AGTCTTGTTAATTAGTGATT+TGG + chr2_3:25218293-25218312 Msa0285450:three_prime_UTR 25.0%
! AAAATCACGAAGAGACTTTT+TGG - chr2_3:25210751-25210770 None:intergenic 30.0%
!! ACATATCGATTTCGTATCTT+AGG + chr2_3:25210846-25210865 Msa0285450:five_prime_UTR 30.0%
!! CATATCGATTTCGTATCTTA+GGG + chr2_3:25210847-25210866 Msa0285450:five_prime_UTR 30.0%
TTCTTAGCAAAACTTCGATT+TGG + chr2_3:25210887-25210906 Msa0285450:five_prime_UTR 30.0%
TCTTAGCAAAACTTCGATTT+GGG + chr2_3:25210888-25210907 Msa0285450:five_prime_UTR 30.0%
!! TTTTCTTCGTTTTGACCAAA+TGG + chr2_3:25210951-25210970 Msa0285450:five_prime_UTR 30.0%
!! TTTCTTCGTTTTGACCAAAT+GGG + chr2_3:25210952-25210971 Msa0285450:five_prime_UTR 30.0%
!!! ATTCTCGTTTTAGTTTCTTC+TGG + chr2_3:25210981-25211000 Msa0285450:five_prime_UTR 30.0%
!!! TTCTCGTTTTAGTTTCTTCT+GGG + chr2_3:25210982-25211001 Msa0285450:five_prime_UTR 30.0%
TAATTCCTGGGTTTCTTAAA+GGG + chr2_3:25211045-25211064 Msa0285450:five_prime_UTR 30.0%
!!! AGTTGTTTTGGTGTTGATTT+TGG + chr2_3:25211125-25211144 Msa0285450:five_prime_UTR 30.0%
!!! GGTAATAGTAGAGTTTTTTG+AGG + chr2_3:25211146-25211165 Msa0285450:five_prime_UTR 30.0%
! TTAACTTTTCACGTGAATTC+AGG + chr2_3:25211600-25211619 Msa0285450:intron 30.0%
!! TTAGATGATAGTGGAGAAAT+CGG + chr2_3:25211712-25211731 Msa0285450:CDS 30.0%
GTTTATTTGGAAACTCCTAA+GGG + chr2_3:25211905-25211924 Msa0285450:CDS 30.0%
!!! ATCTATACTTCTTTTGGGTT+TGG + chr2_3:25211979-25211998 Msa0285450:intron 30.0%
AATGAGATTAAGGCTAAACT+AGG + chr2_3:25212044-25212063 Msa0285450:intron 30.0%
ATGAGATTAAGGCTAAACTA+GGG + chr2_3:25212045-25212064 Msa0285450:intron 30.0%
GTTTCGTGATTATTAAACAG+AGG + chr2_3:25212118-25212137 Msa0285450:intron 30.0%
!!! TTAAACAGAGGTGTTTTGTT+TGG + chr2_3:25212130-25212149 Msa0285450:intron 30.0%
CTGCTATATAACAACAACAT+AGG - chr2_3:25212304-25212323 None:intergenic 30.0%
TTGTTATATAGCAGCTATAG+TGG + chr2_3:25212310-25212329 Msa0285450:intron 30.0%
TTCTACTAAATAATGTGCCT+CGG - chr2_3:25212456-25212475 None:intergenic 30.0%
! CTTTTTATGCAGATAGCAAT+AGG + chr2_3:25212579-25212598 Msa0285450:intron 30.0%
ACACTTCTCTCTTATTACTT+CGG + chr2_3:25212618-25212637 Msa0285450:intron 30.0%
! TTTATAGAAGAACTAGTCTC+AGG - chr2_3:25212960-25212979 None:intergenic 30.0%
AATACGAGATTTCTTCTTTG+TGG + chr2_3:25212999-25213018 Msa0285450:CDS 30.0%
TAAATCAGTCTATAACAGGT+AGG - chr2_3:25213110-25213129 None:intergenic 30.0%
ACAAACTTACTTCAGTACAT+AGG - chr2_3:25213202-25213221 None:intergenic 30.0%
! TGAAGTAAGTTTGTTTCACA+CGG + chr2_3:25213208-25213227 Msa0285450:intron 30.0%
! TTATCGCATTTTTCACCATT+TGG + chr2_3:25213434-25213453 Msa0285450:intron 30.0%
TTGATTACATTGTCTCCAAA+TGG - chr2_3:25213452-25213471 None:intergenic 30.0%
TATTACTTAAGGCATATGCA+TGG + chr2_3:25213474-25213493 Msa0285450:intron 30.0%
TAACAAACCTAAAGAAGCTA+TGG + chr2_3:25213557-25213576 Msa0285450:intron 30.0%
! TTTTGTACCATAGCTTCTTT+AGG - chr2_3:25213567-25213586 None:intergenic 30.0%
CAAGAATAAAATAAGCGTAG+TGG + chr2_3:25213667-25213686 Msa0285450:intron 30.0%
ACCTATAGTAGTAAAGATGA+TGG + chr2_3:25213774-25213793 Msa0285450:intron 30.0%
TCCATCATCTTTACTACTAT+AGG - chr2_3:25213778-25213797 None:intergenic 30.0%
! GGCATGTATATTTTGTAGTA+AGG + chr2_3:25213829-25213848 Msa0285450:intron 30.0%
! ATGTTTTTCTGTTTTCACTC+TGG + chr2_3:25214082-25214101 Msa0285450:intron 30.0%
!! GTGTTTTCCGATGTTTTATT+CGG + chr2_3:25214177-25214196 Msa0285450:intron 30.0%
!!! AGTTTATTTTGTTCATGGCT+AGG - chr2_3:25214574-25214593 None:intergenic 30.0%
TTCTTAAGGTTTATGTCAGT+TGG + chr2_3:25214701-25214720 Msa0285450:intron 30.0%
TCTTCTGTTAATTTAACAGC+TGG + chr2_3:25214797-25214816 Msa0285450:intron 30.0%
TTACTTGAATGAACTTGGTA+TGG + chr2_3:25214821-25214840 Msa0285450:intron 30.0%
GAATTTGCAAGATGCTAAAT+TGG + chr2_3:25214861-25214880 Msa0285450:intron 30.0%
TTATATCACCTTAACGTGAT+TGG + chr2_3:25215034-25215053 Msa0285450:intron 30.0%
TGTGTTTATGTTGCAAAAGA+AGG - chr2_3:25215064-25215083 None:intergenic 30.0%
! GGAAACTATTGAAGACTTTT+AGG + chr2_3:25215163-25215182 Msa0285450:intron 30.0%
TTGTCAAATAGAAGCTATAG+TGG + chr2_3:25215210-25215229 Msa0285450:intron 30.0%
TGTACTAAACATTGTATTGC+AGG - chr2_3:25215280-25215299 None:intergenic 30.0%
GCTAGAGAAAACAATATCTT+TGG - chr2_3:25215884-25215903 None:intergenic 30.0%
GTTAAATCTATCAATGCTAG+TGG + chr2_3:25215970-25215989 Msa0285450:CDS 30.0%
! AATTAAGTTTTGCTGCAATG+AGG + chr2_3:25216028-25216047 Msa0285450:CDS 30.0%
CCTCAAAATATCCTGAAAAA+GGG - chr2_3:25216086-25216105 None:intergenic 30.0%
!!! CCTTTTTCAGGATATTTTGA+GGG + chr2_3:25216084-25216103 Msa0285450:CDS 30.0%
TTTGAGGGAGAAAAATATGA+TGG + chr2_3:25216099-25216118 Msa0285450:CDS 30.0%
GTGGATTCAAAGATATTATC+TGG - chr2_3:25216230-25216249 None:intergenic 30.0%
!! AGAAACTTGAGTATTTTAGG+TGG + chr2_3:25216605-25216624 Msa0285450:intron 30.0%
AAATTTATGAAAGCCGTTTC+AGG - chr2_3:25216798-25216817 None:intergenic 30.0%
TGTAAGATTATCTAGGTAGA+GGG - chr2_3:25216860-25216879 None:intergenic 30.0%
ATGTAAGATTATCTAGGTAG+AGG - chr2_3:25216861-25216880 None:intergenic 30.0%
!!! TCTTACATTTTGAGTTCTAC+TGG + chr2_3:25216873-25216892 Msa0285450:intron 30.0%
ACAAGATTCCTAATAAGGAA+TGG - chr2_3:25216916-25216935 None:intergenic 30.0%
!!! ATCTTGTACTTTTTCTTCTG+AGG + chr2_3:25216929-25216948 Msa0285450:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr2_3:25217047-25217066 Msa0285450:intron 30.0%
ATGATCACCTAAAATGCAAA+TGG + chr2_3:25217167-25217186 Msa0285450:intron 30.0%
TTTCTCTGCAAAGACAATAA+CGG - chr2_3:25217199-25217218 None:intergenic 30.0%
GCATCCTGTATACAATATTA+TGG + chr2_3:25217332-25217351 Msa0285450:intron 30.0%
AACAAAATAAAGTTGGCAGA+AGG - chr2_3:25217729-25217748 None:intergenic 30.0%
!!! TTCTGCCAACTTTATTTTGT+TGG + chr2_3:25217728-25217747 Msa0285450:intron 30.0%
ATCCAATTGATTATCCAAAC+AGG - chr2_3:25217819-25217838 None:intergenic 30.0%
AACTGCAAATGGTTATTAAC+AGG + chr2_3:25218150-25218169 Msa0285450:CDS 30.0%
!! TTTGGAATTTTGACACACTA+TGG + chr2_3:25218311-25218330 Msa0285450:three_prime_UTR 30.0%
! AAAAGGCCATCAAAATTTTC+TGG + chr2_3:25218341-25218360 Msa0285450:three_prime_UTR 30.0%
! GTAATGCCAGAAAATTTTGA+TGG - chr2_3:25218350-25218369 None:intergenic 30.0%
! TTCTCTAGAGAAAGAAATTC+AGG + chr2_3:25218379-25218398 Msa0285450:three_prime_UTR 30.0%
! CTTAGCAAAACTTCGATTTG+GGG + chr2_3:25210889-25210908 Msa0285450:five_prime_UTR 35.0%
CTAATTCCTGGGTTTCTTAA+AGG + chr2_3:25211044-25211063 Msa0285450:five_prime_UTR 35.0%
!! TTTTACCCTTTAAGAAACCC+AGG - chr2_3:25211053-25211072 None:intergenic 35.0%
!! TCTGGGTTGATTTGTAGTAT+TGG + chr2_3:25211100-25211119 Msa0285450:five_prime_UTR 35.0%
!! CTGGGTTGATTTGTAGTATT+GGG + chr2_3:25211101-25211120 Msa0285450:five_prime_UTR 35.0%
!! GTAGTATTGGGAAGTTGTTT+TGG + chr2_3:25211113-25211132 Msa0285450:five_prime_UTR 35.0%
!!! AGTAGAGTTTTTTGAGGCAT+TGG + chr2_3:25211152-25211171 Msa0285450:five_prime_UTR 35.0%
!!! GTAGAGTTTTTTGAGGCATT+GGG + chr2_3:25211153-25211172 Msa0285450:five_prime_UTR 35.0%
!!! TAGAGTTTTTTGAGGCATTG+GGG + chr2_3:25211154-25211173 Msa0285450:five_prime_UTR 35.0%
CCTTGCAAGTAAACAAAATC+CGG - chr2_3:25211685-25211704 None:intergenic 35.0%
!! TAGATGATAGTGGAGAAATC+GGG + chr2_3:25211713-25211732 Msa0285450:CDS 35.0%
! AGAAATCGGGTCTTTTGTAT+GGG + chr2_3:25211726-25211745 Msa0285450:CDS 35.0%
GGAAGAAAATAATCCACACA+AGG - chr2_3:25211779-25211798 None:intergenic 35.0%
ACTCACGGTATTAGGTAATT+TGG - chr2_3:25211800-25211819 None:intergenic 35.0%
AATTATCCACCAAACACTCA+CGG - chr2_3:25211815-25211834 None:intergenic 35.0%
TCTTCTGTGATTGTTTGACA+TGG + chr2_3:25211836-25211855 Msa0285450:intron 35.0%
GGTTTATTTGGAAACTCCTA+AGG + chr2_3:25211904-25211923 Msa0285450:intron 35.0%
ATATGCAAACTAAGATGTGC+TGG + chr2_3:25212007-25212026 Msa0285450:intron 35.0%
GAGTACCTTACACTATTTAC+TGG + chr2_3:25212157-25212176 Msa0285450:CDS 35.0%
!!! TCATCAAGCTTTTTTCTCAG+TGG + chr2_3:25212215-25212234 Msa0285450:CDS 35.0%
! AAAAGCATGACAATCCAAGA+TGG - chr2_3:25212262-25212281 None:intergenic 35.0%
ATATAACAACAACATAGGCC+AGG - chr2_3:25212299-25212318 None:intergenic 35.0%
AACAAATCACTATTGTTCCG+AGG + chr2_3:25212436-25212455 Msa0285450:intron 35.0%
! TCGTTTTACAATACTGTTCC+CGG + chr2_3:25212546-25212565 Msa0285450:intron 35.0%
GAAGTAATAAGAGAGAAGTG+TGG - chr2_3:25212619-25212638 None:intergenic 35.0%
TAAAAGATGACTGAGCAAGT+TGG - chr2_3:25212794-25212813 None:intergenic 35.0%
TTAAAAGGATGCGTGCTTAT+TGG + chr2_3:25213148-25213167 Msa0285450:intron 35.0%
TTATTGGAGTCATTAGAGGA+TGG + chr2_3:25213164-25213183 Msa0285450:CDS 35.0%
!! GTTTATCCGTTACTGCTTTT+TGG + chr2_3:25213247-25213266 Msa0285450:intron 35.0%
TGCAGATAACTTCATATGCA+TGG + chr2_3:25213294-25213313 Msa0285450:intron 35.0%
GTTTGTTCATAATTGGGATC+AGG + chr2_3:25213525-25213544 Msa0285450:intron 35.0%
ACACTCCGTTCAATGATTTA+AGG - chr2_3:25213627-25213646 None:intergenic 35.0%
TAAATCATTGAACGGAGTGT+TGG + chr2_3:25213627-25213646 Msa0285450:intron 35.0%
! AAATCATTGAACGGAGTGTT+GGG + chr2_3:25213628-25213647 Msa0285450:intron 35.0%
!! AGATGATGGAAAATAGGCTT+AGG + chr2_3:25213788-25213807 Msa0285450:intron 35.0%
ATGGAAAATAGGCTTAGGTT+GGG + chr2_3:25213793-25213812 Msa0285450:intron 35.0%
ATGTAACCAATCCCACTTAT+CGG + chr2_3:25213960-25213979 Msa0285450:intron 35.0%
GGGGATGTAAACTTCAAAAT+CGG + chr2_3:25214120-25214139 Msa0285450:CDS 35.0%
TGTTGCACCGAATAAAACAT+CGG - chr2_3:25214187-25214206 None:intergenic 35.0%
TTCTGCTCATATATCACTCT+TGG + chr2_3:25214361-25214380 Msa0285450:CDS 35.0%
CATATATCACTCTTGGTTTC+TGG + chr2_3:25214368-25214387 Msa0285450:CDS 35.0%
ATATGATTCTCCAAAAGCTG+AGG - chr2_3:25214508-25214527 None:intergenic 35.0%
TGGCATTTAGTGAATAGAGT+AGG + chr2_3:25214881-25214900 Msa0285450:intron 35.0%
!! AAGACTTTTAGGCTGATTTC+TGG + chr2_3:25215174-25215193 Msa0285450:intron 35.0%
AACCTGGATCATGAAAATAG+CGG - chr2_3:25215367-25215386 None:intergenic 35.0%
TACTTTGTCTAACATGAGTG+CGG - chr2_3:25215505-25215524 None:intergenic 35.0%
AAACTGTAAAACGAAGCTAC+AGG - chr2_3:25215560-25215579 None:intergenic 35.0%
CTACAATGAACCATACTTCA+TGG + chr2_3:25215654-25215673 Msa0285450:intron 35.0%
! GCTTCTTGGTATTTGTTAAC+AGG + chr2_3:25215708-25215727 Msa0285450:intron 35.0%
! TCTTTTCTTTTGTAATCGGC+AGG + chr2_3:25215843-25215862 Msa0285450:CDS 35.0%
!! TTAACTCTAGAGCATGATTC+TGG - chr2_3:25215955-25215974 None:intergenic 35.0%
! TTGAAGATAATGGCAGTGAT+AGG + chr2_3:25216001-25216020 Msa0285450:CDS 35.0%
!!! CCCTTTTTCAGGATATTTTG+AGG + chr2_3:25216083-25216102 Msa0285450:CDS 35.0%
CCCTCAAAATATCCTGAAAA+AGG - chr2_3:25216087-25216106 None:intergenic 35.0%
TTGTGCTTAATTGGAACATG+AGG - chr2_3:25216147-25216166 None:intergenic 35.0%
CATGTTCCAATTAAGCACAA+TGG + chr2_3:25216147-25216166 Msa0285450:CDS 35.0%
CCTAAACCATTGTGCTTAAT+TGG - chr2_3:25216156-25216175 None:intergenic 35.0%
CCAATTAAGCACAATGGTTT+AGG + chr2_3:25216153-25216172 Msa0285450:CDS 35.0%
TTTCTGTTTGTAACTGAACG+AGG - chr2_3:25216180-25216199 None:intergenic 35.0%
!!! CCATGTTTTTTCATTGGTAG+TGG - chr2_3:25216249-25216268 None:intergenic 35.0%
CCACTACCAATGAAAAAACA+TGG + chr2_3:25216246-25216265 Msa0285450:CDS 35.0%
AATAGAACTGAAGGTAGCAA+AGG - chr2_3:25216332-25216351 None:intergenic 35.0%
! CCTTCAGTTCTATTTTACGT+CGG + chr2_3:25216338-25216357 Msa0285450:intron 35.0%
GAAATTGCATTACATCCTTC+AGG - chr2_3:25216413-25216432 None:intergenic 35.0%
GAAGGATGTAATGCAATTTC+TGG + chr2_3:25216413-25216432 Msa0285450:CDS 35.0%
! AGGTAAGACTTTTGTACATG+TGG + chr2_3:25216538-25216557 Msa0285450:intron 35.0%
!! GTATTTTAGGTGGTTTCAAG+AGG + chr2_3:25216615-25216634 Msa0285450:intron 35.0%
ATGTTGGGAATGGTATCAAT+TGG + chr2_3:25216646-25216665 Msa0285450:CDS 35.0%
TGACACATAGAATGACAGTA+AGG + chr2_3:25216706-25216725 Msa0285450:intron 35.0%
!!! TTACTTTTAGGAAAAGCACC+AGG + chr2_3:25216829-25216848 Msa0285450:intron 35.0%
GTAAGATTATCTAGGTAGAG+GGG - chr2_3:25216859-25216878 None:intergenic 35.0%
AGAAACTAGCAAGAAAGACA+TGG + chr2_3:25217027-25217046 Msa0285450:intron 35.0%
! GATCAAGCCATTTGCATTTT+AGG - chr2_3:25217177-25217196 None:intergenic 35.0%
CAACAAAATAACCAACTTCG+TGG - chr2_3:25217227-25217246 None:intergenic 35.0%
! TTAGCTCATGATGATGTAGA+TGG + chr2_3:25217438-25217457 Msa0285450:CDS 35.0%
TGTTGTTGACACAACATGAA+AGG - chr2_3:25217560-25217579 None:intergenic 35.0%
AACTGATAAAAGGTCCTGTT+TGG + chr2_3:25217802-25217821 Msa0285450:intron 35.0%
GTCCTGTTTGGATAATCAAT+TGG + chr2_3:25217814-25217833 Msa0285450:intron 35.0%
CTTTAACATGAGCACTTATG+TGG - chr2_3:25217879-25217898 None:intergenic 35.0%
GTCCTGCCATTCATAATAAA+GGG - chr2_3:25218056-25218075 None:intergenic 35.0%
AGTCCTGCCATTCATAATAA+AGG - chr2_3:25218057-25218076 None:intergenic 35.0%
AAATCGCAGAAAACTGCAAA+TGG + chr2_3:25218139-25218158 Msa0285450:CDS 35.0%
TTAACACTAGCCATGTACAT+TGG - chr2_3:25218203-25218222 None:intergenic 35.0%
AAACCTACCTTTACCAATTG+AGG - chr2_3:25218254-25218273 None:intergenic 35.0%
ATTGGTAAAGGTAGGTTTGT+AGG + chr2_3:25218256-25218275 Msa0285450:CDS 35.0%
CACACTATGGTCACAAAAAA+AGG + chr2_3:25218324-25218343 Msa0285450:three_prime_UTR 35.0%
! GTTTTGCAGTTGTGAGAAGT+GGG + chr2_3:25211190-25211209 Msa0285450:five_prime_UTR 40.0%
! TTTTGCAGTTGTGAGAAGTG+GGG + chr2_3:25211191-25211210 Msa0285450:five_prime_UTR 40.0%
!! AGTCTTCTTGCTGTTCTTAG+TGG + chr2_3:25211270-25211289 Msa0285450:CDS 40.0%
AACGAAGAAAGTTCCGGAAA+CGG - chr2_3:25211372-25211391 None:intergenic 40.0%
TTTCCGGAACTTTCTTCGTT+CGG + chr2_3:25211372-25211391 Msa0285450:CDS 40.0%
ATGCATAGCAAGGCTAACAT+AGG - chr2_3:25211455-25211474 None:intergenic 40.0%
!! GTTAGCCTTGCTATGCATTA+CGG + chr2_3:25211457-25211476 Msa0285450:intron 40.0%
!! TTAGCCTTGCTATGCATTAC+GGG + chr2_3:25211458-25211477 Msa0285450:intron 40.0%
!! CCGGATTTTGTTTACTTGCA+AGG + chr2_3:25211682-25211701 Msa0285450:CDS 40.0%
! GAGAAATCGGGTCTTTTGTA+TGG + chr2_3:25211725-25211744 Msa0285450:CDS 40.0%
AATAATCCACACAAGGCTTC+CGG - chr2_3:25211772-25211791 None:intergenic 40.0%
TACCTAATACCGTGAGTGTT+TGG + chr2_3:25211803-25211822 Msa0285450:intron 40.0%
CTGTGATTGTTTGACATGGA+TGG + chr2_3:25211840-25211859 Msa0285450:intron 40.0%
AACTCCTAAGGGCGAAAAAT+TGG + chr2_3:25211916-25211935 Msa0285450:CDS 40.0%
GTATTAGTCATCCACCATCT+TGG + chr2_3:25212245-25212264 Msa0285450:intron 40.0%
TGTCAAATAACGGCTATAGC+AGG + chr2_3:25212408-25212427 Msa0285450:intron 40.0%
TACCATAGCACTGTTGTGTA+GGG + chr2_3:25212491-25212510 Msa0285450:intron 40.0%
GTATTGTAAAACGAGGATCG+CGG - chr2_3:25212540-25212559 None:intergenic 40.0%
GGGAACAGTATTGTAAAACG+AGG - chr2_3:25212547-25212566 None:intergenic 40.0%
ATAAAAAGAGATGCACAGCC+GGG - chr2_3:25212567-25212586 None:intergenic 40.0%
CATAAAAAGAGATGCACAGC+CGG - chr2_3:25212568-25212587 None:intergenic 40.0%
TTCTCATGCCATGGATTCAT+TGG - chr2_3:25212650-25212669 None:intergenic 40.0%
TAGTACATCCAGCCATACAT+GGG + chr2_3:25212761-25212780 Msa0285450:intron 40.0%
ACTATACTGTGTGCAAAACG+AGG + chr2_3:25212815-25212834 Msa0285450:CDS 40.0%
ATACCTCACAACAGTCAGAA+GGG + chr2_3:25212840-25212859 Msa0285450:CDS 40.0%
AAGCCTGGTCCAAAAATTCT+CGG + chr2_3:25212870-25212889 Msa0285450:CDS 40.0%
GAACCTCCTAACATTGAAGT+TGG + chr2_3:25212894-25212913 Msa0285450:CDS 40.0%
CATGGACCAACTTCAATGTT+AGG - chr2_3:25212903-25212922 None:intergenic 40.0%
GTGCTTATTGGAGTCATTAG+AGG + chr2_3:25213160-25213179 Msa0285450:CDS 40.0%
GAGCATCCAAAAAGCAGTAA+CGG - chr2_3:25213256-25213275 None:intergenic 40.0%
! GTATGTGCTGAAAAGTGCAA+TGG + chr2_3:25213596-25213615 Msa0285450:intron 40.0%
!! AATCATTGAACGGAGTGTTG+GGG + chr2_3:25213629-25213648 Msa0285450:intron 40.0%
ATGTGTGGTAAGACTTAGAC+AGG + chr2_3:25213710-25213729 Msa0285450:intron 40.0%
TGGTAAGACTTAGACAGGAT+AGG + chr2_3:25213715-25213734 Msa0285450:intron 40.0%
ATGAGAACATCAGAGAGAGT+TGG + chr2_3:25213745-25213764 Msa0285450:intron 40.0%
TGAGAACATCAGAGAGAGTT+GGG + chr2_3:25213746-25213765 Msa0285450:intron 40.0%
GATGGAAAATAGGCTTAGGT+TGG + chr2_3:25213792-25213811 Msa0285450:intron 40.0%
!! GATAAGTGGGATTGGTTACA+TGG - chr2_3:25213961-25213980 None:intergenic 40.0%
TGTAACCAATCCCACTTATC+GGG + chr2_3:25213961-25213980 Msa0285450:intron 40.0%
TTTATCCCGATAAGTGGGAT+TGG - chr2_3:25213969-25213988 None:intergenic 40.0%
! CAAGCTTTATCCCGATAAGT+GGG - chr2_3:25213974-25213993 None:intergenic 40.0%
!!! CTCTGGCTTTTCTACAGATA+CGG + chr2_3:25214099-25214118 Msa0285450:intron 40.0%
!!! TCTGGCTTTTCTACAGATAC+GGG + chr2_3:25214100-25214119 Msa0285450:intron 40.0%
GTAAACTTCAAAATCGGACG+AGG + chr2_3:25214126-25214145 Msa0285450:CDS 40.0%
! TCAAAATCGGACGAGGTATT+TGG + chr2_3:25214133-25214152 Msa0285450:intron 40.0%
TATATGAGCAGAACTAGACG+TGG - chr2_3:25214354-25214373 None:intergenic 40.0%
AGACGCTTGTTTCAATGATC+AGG + chr2_3:25214397-25214416 Msa0285450:CDS 40.0%
CTTGTTTCAATGATCAGGCA+CGG + chr2_3:25214402-25214421 Msa0285450:CDS 40.0%
TTGTTTCAATGATCAGGCAC+GGG + chr2_3:25214403-25214422 Msa0285450:CDS 40.0%
! GTATGTGTTTCCTCAGCTTT+TGG + chr2_3:25214495-25214514 Msa0285450:intron 40.0%
! CTGGACAAGTTGACTATTCT+CGG - chr2_3:25214545-25214564 None:intergenic 40.0%
TTCAAACACACTAGATCCAC+AGG - chr2_3:25214632-25214651 None:intergenic 40.0%
TTTGTATGCGTGTTCCTACA+TGG + chr2_3:25214653-25214672 Msa0285450:CDS 40.0%
TTGTATGCGTGTTCCTACAT+GGG + chr2_3:25214654-25214673 Msa0285450:CDS 40.0%
! AGGTTTATGTCAGTTGGTCT+AGG + chr2_3:25214707-25214726 Msa0285450:intron 40.0%
CTGGCTTACTTGAATGAACT+TGG + chr2_3:25214816-25214835 Msa0285450:intron 40.0%
TCTCTACCACATGTATAAGC+TGG + chr2_3:25214997-25215016 Msa0285450:intron 40.0%
CGATTACCAGCTTATACATG+TGG - chr2_3:25215006-25215025 None:intergenic 40.0%
AAGGATCACCAATCACGTTA+AGG - chr2_3:25215045-25215064 None:intergenic 40.0%
GTTATAGCGTTGTAGCATAG+AGG + chr2_3:25215329-25215348 Msa0285450:intron 40.0%
!! AACCGCTATTTTCATGATCC+AGG + chr2_3:25215362-25215381 Msa0285450:intron 40.0%
AAAGTTTGTGTTGTCGAACC+TGG - chr2_3:25215383-25215402 None:intergenic 40.0%
TAGCAACGCCTAACATAACT+AGG - chr2_3:25215771-25215790 None:intergenic 40.0%
! TTAGGCGTTGCTAGTATTCA+GGG + chr2_3:25215778-25215797 Msa0285450:CDS 40.0%
! TTTTCTCTAGCCATCCTAGT+TGG + chr2_3:25215893-25215912 Msa0285450:CDS 40.0%
! TCTAGAGCATGATTCTGGTT+CGG - chr2_3:25215950-25215969 None:intergenic 40.0%
GGCGTGAAAGTTGAAGATAA+TGG + chr2_3:25215991-25216010 Msa0285450:CDS 40.0%
! CTGAAAAAGGGAGAAGCTTT+TGG - chr2_3:25216074-25216093 None:intergenic 40.0%
! CAAAAGCTTCTCCCTTTTTC+AGG + chr2_3:25216072-25216091 Msa0285450:CDS 40.0%
! GAAAAATATGATGGAGACCG+TGG + chr2_3:25216108-25216127 Msa0285450:CDS 40.0%
!!! GAGGCTGATTTGATTTTCCA+CGG - chr2_3:25216128-25216147 None:intergenic 40.0%
!!! TCGCAGCCATGTTTTTTCAT+TGG - chr2_3:25216255-25216274 None:intergenic 40.0%
CCGACGTAAAATAGAACTGA+AGG - chr2_3:25216341-25216360 None:intergenic 40.0%
!! TTGTTTTTCCCTGTTGTGAC+AGG + chr2_3:25216380-25216399 Msa0285450:intron 40.0%
!! ATGCAATTTCTGGTTCTTCG+AGG + chr2_3:25216423-25216442 Msa0285450:CDS 40.0%
!! TGCAATTTCTGGTTCTTCGA+GGG + chr2_3:25216424-25216443 Msa0285450:CDS 40.0%
CAGACGTTTAGCATTCAGAA+CGG - chr2_3:25216496-25216515 None:intergenic 40.0%
!! TTTTAGGTGGTTTCAAGAGG+AGG + chr2_3:25216618-25216637 Msa0285450:intron 40.0%
GGGAATGGTATCAATTGGAA+AGG + chr2_3:25216651-25216670 Msa0285450:CDS 40.0%
TGCACATGCATTACCTGAAA+CGG + chr2_3:25216782-25216801 Msa0285450:intron 40.0%
GAGAAATTAAGCCACGAAGT+TGG + chr2_3:25217213-25217232 Msa0285450:intron 40.0%
!!! TTTTTGCTGTTGTAGGGTGT+TGG + chr2_3:25217369-25217388 Msa0285450:intron 40.0%
! AATGCTGCTTATTGTGTCAC+AGG + chr2_3:25217463-25217482 Msa0285450:CDS 40.0%
TGTGTCTGAGTATGTGTGTA+AGG + chr2_3:25217502-25217521 Msa0285450:intron 40.0%
!!! CTCATTTTGGTTGTGATAGG+CGG + chr2_3:25217628-25217647 Msa0285450:CDS 40.0%
GTATACTAGAGAGTGAGAGA+TGG + chr2_3:25218008-25218027 Msa0285450:intron 40.0%
CACCCTTTATTATGAATGGC+AGG + chr2_3:25218051-25218070 Msa0285450:intron 40.0%
AAATTTGACATGCTGCAGTG+TGG - chr2_3:25218112-25218131 None:intergenic 40.0%
TTTCCTAGAGCCAATGTACA+TGG + chr2_3:25218190-25218209 Msa0285450:CDS 40.0%
TTCTGTGCTTGATCCTCAAT+TGG + chr2_3:25218238-25218257 Msa0285450:CDS 40.0%
GCTTGATCCTCAATTGGTAA+AGG + chr2_3:25218244-25218263 Msa0285450:CDS 40.0%
GATCCTCAATTGGTAAAGGT+AGG + chr2_3:25218248-25218267 Msa0285450:CDS 40.0%
ACGAGAATCAGTGACCCATT+TGG - chr2_3:25210969-25210988 None:intergenic 45.0%
! GGTTTTGCAGTTGTGAGAAG+TGG + chr2_3:25211189-25211208 Msa0285450:five_prime_UTR 45.0%
GTCTTGACACACCCTGAAAA+TGG - chr2_3:25211245-25211264 None:intergenic 45.0%
ACAAAAGCAGAAGCAGAAGC+AGG + chr2_3:25211311-25211330 Msa0285450:CDS 45.0%
! ATTTTCGTCGTACCCGTTTC+CGG + chr2_3:25211356-25211375 Msa0285450:CDS 45.0%
ACGAAGAAAGTTCCGGAAAC+GGG - chr2_3:25211371-25211390 None:intergenic 45.0%
TTCCGGAACTTTCTTCGTTC+GGG + chr2_3:25211373-25211392 Msa0285450:CDS 45.0%
ATAGCAAGGCTAACATAGGC+AGG - chr2_3:25211451-25211470 None:intergenic 45.0%
CTTATCCCACTGAGTGTAGT+CGG - chr2_3:25211499-25211518 None:intergenic 45.0%
ACACTCAGTGGGATAAGACT+TGG + chr2_3:25211502-25211521 Msa0285450:intron 45.0%
CGAGCAAGTTCATCGAAAGT+AGG - chr2_3:25211643-25211662 None:intergenic 45.0%
!! AGTTCTAGAACAACTGCAGC+CGG + chr2_3:25211663-25211682 Msa0285450:CDS 45.0%
GGTCAGCAGTTAGATGATAG+TGG + chr2_3:25211703-25211722 Msa0285450:CDS 45.0%
!! AGATTTTGACCTGTCTACCC+CGG + chr2_3:25211750-25211769 Msa0285450:CDS 45.0%
ATAATCCACACAAGGCTTCC+GGG - chr2_3:25211771-25211790 None:intergenic 45.0%
CACCAAACACTCACGGTATT+AGG - chr2_3:25211808-25211827 None:intergenic 45.0%
CTAATACCGTGAGTGTTTGG+TGG + chr2_3:25211806-25211825 Msa0285450:intron 45.0%
! TCTGCCAATTTTTCGCCCTT+AGG - chr2_3:25211923-25211942 None:intergenic 45.0%
TAAGGGCGAAAAATTGGCAG+AGG + chr2_3:25211922-25211941 Msa0285450:CDS 45.0%
! GCTAAACTAGGGTGTTAACG+AGG + chr2_3:25212056-25212075 Msa0285450:intron 45.0%
!!! ACAGAGGTGTTTTGTTTGGC+AGG + chr2_3:25212134-25212153 Msa0285450:intron 45.0%
!!! CAGAGGTGTTTTGTTTGGCA+GGG + chr2_3:25212135-25212154 Msa0285450:intron 45.0%
!!! CTTTTTTCTCAGTGGCACAG+AGG + chr2_3:25212223-25212242 Msa0285450:CDS 45.0%
AGCATGACAATCCAAGATGG+TGG - chr2_3:25212259-25212278 None:intergenic 45.0%
GTACCATAGCACTGTTGTGT+AGG + chr2_3:25212490-25212509 Msa0285450:intron 45.0%
ACCATAGCACTGTTGTGTAG+GGG + chr2_3:25212492-25212511 Msa0285450:intron 45.0%
GGATTCCACCAATGAATCCA+TGG + chr2_3:25212639-25212658 Msa0285450:intron 45.0%
TCATGCCATGGATTCATTGG+TGG - chr2_3:25212647-25212666 None:intergenic 45.0%
TTGCTACACTTCTCATGCCA+TGG - chr2_3:25212659-25212678 None:intergenic 45.0%
GTAGTACATCCAGCCATACA+TGG + chr2_3:25212760-25212779 Msa0285450:intron 45.0%
!! GTTGGAAAGCATCCCATGTA+TGG - chr2_3:25212776-25212795 None:intergenic 45.0%
CATACCTCACAACAGTCAGA+AGG + chr2_3:25212839-25212858 Msa0285450:CDS 45.0%
AGCCTGGTCCAAAAATTCTC+GGG + chr2_3:25212871-25212890 Msa0285450:CDS 45.0%
GGACCAACTTCAATGTTAGG+AGG - chr2_3:25212900-25212919 None:intergenic 45.0%
AGTGGTAGGCTTGGATACTT+TGG + chr2_3:25213034-25213053 Msa0285450:intron 45.0%
ACACGGTTGCTTGCATTTCT+TGG + chr2_3:25213225-25213244 Msa0285450:intron 45.0%
!! ATCATTGAACGGAGTGTTGG+GGG + chr2_3:25213630-25213649 Msa0285450:intron 45.0%
! AAATAAGCGTAGTGGAGACG+AGG + chr2_3:25213675-25213694 Msa0285450:intron 45.0%
AGGATGTTACGTTGGATGTG+TGG + chr2_3:25213695-25213714 Msa0285450:intron 45.0%
GAGAACATCAGAGAGAGTTG+GGG + chr2_3:25213747-25213766 Msa0285450:intron 45.0%
! CCAAGCTTTATCCCGATAAG+TGG - chr2_3:25213975-25213994 None:intergenic 45.0%
CCACTTATCGGGATAAAGCT+TGG + chr2_3:25213972-25213991 Msa0285450:intron 45.0%
!! CTGGCTTTTCTACAGATACG+GGG + chr2_3:25214101-25214120 Msa0285450:intron 45.0%
! AAATCGGACGAGGTATTTGG+TGG + chr2_3:25214136-25214155 Msa0285450:intron 45.0%
CGAGAATAGTCAACTTGTCC+AGG + chr2_3:25214543-25214562 Msa0285450:CDS 45.0%
TTAACCTGTGAAGCCCATGT+AGG - chr2_3:25214670-25214689 None:intergenic 45.0%
TATTCGAGAGCCTCACATTG+TGG + chr2_3:25215106-25215125 Msa0285450:intron 45.0%
!! ATTGACTCGACCACAATGTG+AGG - chr2_3:25215119-25215138 None:intergenic 45.0%
TTGAAGTTTCTGCACCTCCT+GGG - chr2_3:25215474-25215493 None:intergenic 45.0%
! TTTGAAGTTTCTGCACCTCC+TGG - chr2_3:25215475-25215494 None:intergenic 45.0%
TACCGCTGCCTAGTTATGTT+AGG + chr2_3:25215760-25215779 Msa0285450:CDS 45.0%
! GTTAGGCGTTGCTAGTATTC+AGG + chr2_3:25215777-25215796 Msa0285450:CDS 45.0%
!!! GATCTTTTTCGACTAGGTGC+TGG - chr2_3:25215928-25215947 None:intergenic 45.0%
!!! GGTTCGGATCTTTTTCGACT+AGG - chr2_3:25215934-25215953 None:intergenic 45.0%
! TCCAATACGAGTTTGCTCAG+AGG + chr2_3:25216281-25216300 Msa0285450:CDS 45.0%
ACCTCTGAGCAAACTCGTAT+TGG - chr2_3:25216285-25216304 None:intergenic 45.0%
! AATACGAGTTTGCTCAGAGG+TGG + chr2_3:25216284-25216303 Msa0285450:intron 45.0%
! TTTTTCCCTGTTGTGACAGG+AGG + chr2_3:25216383-25216402 Msa0285450:intron 45.0%
GAATTCCTCCTGTCACAACA+GGG - chr2_3:25216391-25216410 None:intergenic 45.0%
TAGCATTCAGAACGGCATCA+GGG - chr2_3:25216488-25216507 None:intergenic 45.0%
TTAGCATTCAGAACGGCATC+AGG - chr2_3:25216489-25216508 None:intergenic 45.0%
! CGTTCTGAATGCTAAACGTC+TGG + chr2_3:25216494-25216513 Msa0285450:CDS 45.0%
TCAAGAGGAGGCTTTCATGT+TGG + chr2_3:25216630-25216649 Msa0285450:CDS 45.0%
CAAGAGGAGGCTTTCATGTT+GGG + chr2_3:25216631-25216650 Msa0285450:CDS 45.0%
TATCAAACGACGCCACTAAG+TGG - chr2_3:25217098-25217117 None:intergenic 45.0%
!!! GGGCTCATTTTGGTTGTGAT+AGG + chr2_3:25217625-25217644 Msa0285450:CDS 45.0%
AGGACTACGCGAAAACTGAT+GGG + chr2_3:25218071-25218090 Msa0285450:intron 45.0%
!! TAGCCATGTACATTGGCTCT+AGG - chr2_3:25218196-25218215 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTCATTAA+TGG + chr2_3:25215686-25215705 Msa0285450:intron 5.0%
!!! TTTTTTTTTTTTTTTTGAAT+CGG - chr2_3:25218482-25218501 None:intergenic 5.0%
GCATTGGGGTGAAACAGTAG+AGG + chr2_3:25211168-25211187 Msa0285450:five_prime_UTR 50.0%
! GCAGGATGATGATGCTTCTG+AGG + chr2_3:25211329-25211348 Msa0285450:CDS 50.0%
TGTAGTCGGCTACATGGCTT+GGG - chr2_3:25211485-25211504 None:intergenic 50.0%
ACTGAGTGTAGTCGGCTACA+TGG - chr2_3:25211491-25211510 None:intergenic 50.0%
ATGTAGCCGACTACACTCAG+TGG + chr2_3:25211490-25211509 Msa0285450:intron 50.0%
TGTAGCCGACTACACTCAGT+GGG + chr2_3:25211491-25211510 Msa0285450:intron 50.0%
TAATCCACACAAGGCTTCCG+GGG - chr2_3:25211770-25211789 None:intergenic 50.0%
!! GGCAGAGGCACTACATTCTA+AGG + chr2_3:25211937-25211956 Msa0285450:CDS 50.0%
TCCCCTACACAACAGTGCTA+TGG - chr2_3:25212496-25212515 None:intergenic 50.0%
!! GAAAGCATCCCATGTATGGC+TGG - chr2_3:25212772-25212791 None:intergenic 50.0%
GCCTGGTCCAAAAATTCTCG+GGG + chr2_3:25212872-25212891 Msa0285450:CDS 50.0%
!! TCCCCGAGAATTTTTGGACC+AGG - chr2_3:25212876-25212895 None:intergenic 50.0%
! GGAGGTTCCCCGAGAATTTT+TGG - chr2_3:25212882-25212901 None:intergenic 50.0%
TCCATGTGAAGCAGACACGA+AGG + chr2_3:25212917-25212936 Msa0285450:CDS 50.0%
TCCTTCGTGTCTGCTTCACA+TGG - chr2_3:25212921-25212940 None:intergenic 50.0%
TGAAGCAGACACGAAGGAAG+AGG + chr2_3:25212923-25212942 Msa0285450:CDS 50.0%
TTGTGGATTTCCCTGCACAG+TGG + chr2_3:25213016-25213035 Msa0285450:CDS 50.0%
!! TCATTGAACGGAGTGTTGGG+GGG + chr2_3:25213631-25213650 Msa0285450:intron 50.0%
TGGAGACGAGGATGTTACGT+TGG + chr2_3:25213687-25213706 Msa0285450:intron 50.0%
AGGTTGGGCATGTAGAGAGA+AGG + chr2_3:25213808-25213827 Msa0285450:intron 50.0%
! AATGTTGCTGCTTGGAGAGG+AGG - chr2_3:25214296-25214315 None:intergenic 50.0%
! GAGAATGTTGCTGCTTGGAG+AGG - chr2_3:25214299-25214318 None:intergenic 50.0%
TGCGTGAGAATGTTGCTGCT+TGG - chr2_3:25214304-25214323 None:intergenic 50.0%
CGTGGATATATCACAGCGCA+TGG - chr2_3:25214336-25214355 None:intergenic 50.0%
GTTCATGGCTAGGAATTGCC+TGG - chr2_3:25214564-25214583 None:intergenic 50.0%
GATCTTCGAGGCTCGTATGA+AGG - chr2_3:25214598-25214617 None:intergenic 50.0%
GCTACTGAAGCTGATCTTCG+AGG - chr2_3:25214610-25214629 None:intergenic 50.0%
AGATCAGCTTCAGTAGCCTG+TGG + chr2_3:25214613-25214632 Msa0285450:CDS 50.0%
TGTTCCTACATGGGCTTCAC+AGG + chr2_3:25214663-25214682 Msa0285450:CDS 50.0%
GCTGTAGTGCTATAGCACAG+AGG + chr2_3:25215234-25215253 Msa0285450:intron 50.0%
CGCCTAACATAACTAGGCAG+CGG - chr2_3:25215765-25215784 None:intergenic 50.0%
! GAGGCATCAACCAACTAGGA+TGG - chr2_3:25215906-25215925 None:intergenic 50.0%
!!! CTTTTTCGACTAGGTGCTGG+AGG - chr2_3:25215925-25215944 None:intergenic 50.0%
! GCTTTTGGCGATGAGACTGA+GGG - chr2_3:25216059-25216078 None:intergenic 50.0%
! AGCTTTTGGCGATGAGACTG+AGG - chr2_3:25216060-25216079 None:intergenic 50.0%
GGAATTCCTCCTGTCACAAC+AGG - chr2_3:25216392-25216411 None:intergenic 50.0%
GTGACAGGAGGAATTCCTGA+AGG + chr2_3:25216395-25216414 Msa0285450:intron 50.0%
CATACTCGCCTCATTCCACA+AGG + chr2_3:25216447-25216466 Msa0285450:CDS 50.0%
GGAGGCTTTCATGTTGGGAA+TGG + chr2_3:25216636-25216655 Msa0285450:CDS 50.0%
! ATGTAGCCGACTCCACTTAG+TGG + chr2_3:25217083-25217102 Msa0285450:intron 50.0%
TGGGTGAACTGTGGTATGTG+TGG + chr2_3:25217597-25217616 Msa0285450:CDS 50.0%
ACTGTGGTATGTGTGGTGAG+TGG + chr2_3:25217604-25217623 Msa0285450:CDS 50.0%
CTGTGGTATGTGTGGTGAGT+GGG + chr2_3:25217605-25217624 Msa0285450:CDS 50.0%
!! TGTGGTGAGTGGGCTCATTT+TGG + chr2_3:25217615-25217634 Msa0285450:CDS 50.0%
TTTGGTTGTGATAGGCGGCA+AGG + chr2_3:25217633-25217652 Msa0285450:CDS 50.0%
! GCAAGGACTCGGAGCATTTA+AGG + chr2_3:25217650-25217669 Msa0285450:CDS 50.0%
CAGGACTACGCGAAAACTGA+TGG + chr2_3:25218070-25218089 Msa0285450:intron 50.0%
CGCCCGAACGAAGAAAGTTC+CGG - chr2_3:25211378-25211397 None:intergenic 55.0%
TTCTTCGTTCGGGCGACTTG+AGG + chr2_3:25211383-25211402 Msa0285450:CDS 55.0%
GGGACCCGTAATGCATAGCA+AGG - chr2_3:25211465-25211484 None:intergenic 55.0%
GTGTAGTCGGCTACATGGCT+TGG - chr2_3:25211486-25211505 None:intergenic 55.0%
CTGCCCTTCTGACTGTTGTG+AGG - chr2_3:25212846-25212865 None:intergenic 55.0%
CACAACAGTCAGAAGGGCAG+CGG + chr2_3:25212846-25212865 Msa0285450:CDS 55.0%
GGATTTCCCTGCACAGTGGT+AGG + chr2_3:25213020-25213039 Msa0285450:intron 55.0%
TCCAAGCCTACCACTGTGCA+GGG - chr2_3:25213029-25213048 None:intergenic 55.0%
ATCCAAGCCTACCACTGTGC+AGG - chr2_3:25213030-25213049 None:intergenic 55.0%
AGCAACATTCTCACGCAGCG+TGG + chr2_3:25214307-25214326 Msa0285450:CDS 55.0%
AGGCAGCGGTACGACACATT+AGG - chr2_3:25215751-25215770 None:intergenic 55.0%
!! GCTGGAGGCATCAACCAACT+AGG - chr2_3:25215910-25215929 None:intergenic 55.0%
TGGCGATGAGACTGAGGGAT+TGG - chr2_3:25216054-25216073 None:intergenic 55.0%
ACTCGCCTCATTCCACAAGG+TGG + chr2_3:25216450-25216469 Msa0285450:CDS 55.0%
CAAGGCCACCTTGTGGAATG+AGG - chr2_3:25216458-25216477 None:intergenic 55.0%
AACTCAGCAAGGCCACCTTG+TGG - chr2_3:25216465-25216484 None:intergenic 55.0%
TCTAGGTAGAGGGGAATGCC+TGG - chr2_3:25216850-25216869 None:intergenic 55.0%
ACGACGCCACTAAGTGGAGT+CGG - chr2_3:25217092-25217111 None:intergenic 55.0%
GTCAACAACAGTAGCGCAGC+AGG + chr2_3:25217570-25217589 Msa0285450:intron 55.0%
TGTGATAGGCGGCAAGGACT+CGG + chr2_3:25217639-25217658 Msa0285450:CDS 55.0%
! CTACGCGAAAACTGATGGGC+TGG + chr2_3:25218075-25218094 Msa0285450:CDS 55.0%
ACAAGGCTTCCGGGGTAGAC+AGG - chr2_3:25211762-25211781 None:intergenic 60.0%
! TCTACCCCGGAAGCCTTGTG+TGG + chr2_3:25211763-25211782 Msa0285450:CDS 60.0%
TCCCTGCACAGTGGTAGGCT+TGG + chr2_3:25213025-25213044 Msa0285450:intron 60.0%
! GTTGCTGCTTGGAGAGGAGG+TGG - chr2_3:25214293-25214312 None:intergenic 60.0%
GTTCTGTAGGGTGCACACCC+AGG + chr2_3:25215454-25215473 Msa0285450:intron 60.0%
CGGCATCAGGGAACTCAGCA+AGG - chr2_3:25216476-25216495 None:intergenic 60.0%
ACAGTAGCGCAGCAGGTGAC+TGG + chr2_3:25217577-25217596 Msa0285450:intron 60.0%
CAGTAGCGCAGCAGGTGACT+GGG + chr2_3:25217578-25217597 Msa0285450:intron 60.0%
GCAGGTGACTGGGTGAACTG+TGG + chr2_3:25217588-25217607 Msa0285450:CDS 60.0%
CAGAAGGGCAGCGGTAAGCC+TGG + chr2_3:25212855-25212874 Msa0285450:CDS 65.0%
GCTGCTTGGAGAGGAGGTGG+TGG - chr2_3:25214290-25214309 None:intergenic 65.0%
CTGTAGGGTGCACACCCAGG+AGG + chr2_3:25215457-25215476 Msa0285450:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 25210604 25218520 25210604 ID=Msa0285450;Name=Msa0285450
chr2_3 mRNA 25210604 25218520 25210604 ID=Msa0285450-mRNA-1;Parent=Msa0285450;Name=Msa0285450-mRNA-1;_AED=0.10;_eAED=0.10;_QI=630|0.85|0.86|1|0.92|0.93|15|243|821
chr2_3 exon 25210604 25211404 25210604 ID=Msa0285450-mRNA-1:exon:9386;Parent=Msa0285450-mRNA-1
chr2_3 exon 25211622 25211813 25211622 ID=Msa0285450-mRNA-1:exon:9387;Parent=Msa0285450-mRNA-1
chr2_3 exon 25211905 25211958 25211905 ID=Msa0285450-mRNA-1:exon:9388;Parent=Msa0285450-mRNA-1
chr2_3 exon 25212156 25212244 25212156 ID=Msa0285450-mRNA-1:exon:9389;Parent=Msa0285450-mRNA-1
chr2_3 exon 25212764 25213037 25212764 ID=Msa0285450-mRNA-1:exon:9390;Parent=Msa0285450-mRNA-1
chr2_3 exon 25213155 25213211 25213155 ID=Msa0285450-mRNA-1:exon:9391;Parent=Msa0285450-mRNA-1
chr2_3 exon 25214116 25214147 25214116 ID=Msa0285450-mRNA-1:exon:9392;Parent=Msa0285450-mRNA-1
chr2_3 exon 25214283 25214424 25214283 ID=Msa0285450-mRNA-1:exon:9393;Parent=Msa0285450-mRNA-1
chr2_3 exon 25214511 25214684 25214511 ID=Msa0285450-mRNA-1:exon:9394;Parent=Msa0285450-mRNA-1
chr2_3 exon 25215730 25216302 25215730 ID=Msa0285450-mRNA-1:exon:9395;Parent=Msa0285450-mRNA-1
chr2_3 exon 25216402 25216539 25216402 ID=Msa0285450-mRNA-1:exon:9396;Parent=Msa0285450-mRNA-1
chr2_3 exon 25216624 25216722 25216624 ID=Msa0285450-mRNA-1:exon:9397;Parent=Msa0285450-mRNA-1
chr2_3 exon 25217384 25217484 25217384 ID=Msa0285450-mRNA-1:exon:9398;Parent=Msa0285450-mRNA-1
chr2_3 exon 25217581 25217745 25217581 ID=Msa0285450-mRNA-1:exon:9399;Parent=Msa0285450-mRNA-1
chr2_3 exon 25218073 25218520 25218073 ID=Msa0285450-mRNA-1:exon:9400;Parent=Msa0285450-mRNA-1
chr2_3 five_prime_UTR 25210604 25211233 25210604 ID=Msa0285450-mRNA-1:five_prime_utr;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25211234 25211404 25211234 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25211622 25211813 25211622 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25211905 25211958 25211905 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25212156 25212244 25212156 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25212764 25213037 25212764 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25213155 25213211 25213155 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25214116 25214147 25214116 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25214283 25214424 25214283 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25214511 25214684 25214511 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25215730 25216302 25215730 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25216402 25216539 25216402 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25216624 25216722 25216624 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25217384 25217484 25217384 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25217581 25217745 25217581 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 CDS 25218073 25218277 25218073 ID=Msa0285450-mRNA-1:cds;Parent=Msa0285450-mRNA-1
chr2_3 three_prime_UTR 25218278 25218520 25218278 ID=Msa0285450-mRNA-1:three_prime_utr;Parent=Msa0285450-mRNA-1
Gene Sequence

>Msa0285450

ATGATGTTCCATTTTCAGGGTGTGTCAAGACATTGTAGTCTTCTTGCTGTTCTTAGTGGTAAATCACATGATAGTAAACAAAAGCAGAAGCAGAAGCAGGATGATGATGCTTCTGAGGATCAATTTTCGTCGTACCCGTTTCCGGAACTTTCTTCGTTCGGGCGACTTGAGGTTAAAGTGTTGACTAAACCTACTTTCGATGAACTTGCTCGAGTTCTAGAACAACTGCAGCCGGATTTTGTTTACTTGCAAGGTCAGCAGTTAGATGATAGTGGAGAAATCGGGTCTTTTGTATGGGAAGATTTTGACCTGTCTACCCCGGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAGGGCGAAAAATTGGCAGAGGCACTACATTCTAAGGGAGTACCTTACACTATTTACTGGAAAAATGAATTTTCAAAGTATGCAGCTTCACATTTTCATCAAGCTTTTTTCTCAGTGGCACAGAGTACATCCAGCCATACATGGGATGCTTTCCAACTTGCTCAGTCATCTTTTAGACTATACTGTGTGCAAAACGAGGTCATACCTCACAACAGTCAGAAGGGCAGCGGTAAGCCTGGTCCAAAAATTCTCGGGGAACCTCCTAACATTGAAGTTGGTCCATGTGAAGCAGACACGAAGGAAGAGGAAGAAGATTCACCTGAGACTAGTTCTTCTATAAAGATATATGATGATGATGTGAATACGAGATTTCTTCTTTGTGGATTTCCCTGCACAGTGGATGCGTGCTTATTGGAGTCATTAGAGGATGGACTCAATGCTCTCCTATGTACTGAAATACGGGGATGTAAACTTCAAAATCGGACGAGTGCTCCACCACCTCCTCTCCAAGCAGCAACATTCTCACGCAGCGTGGTGACCATGCGCTGTGATATATCCACGTCTAGTTCTGCTCATATATCACTCTTGGTTTCTGGTAGTGCAGACGCTTGTTTCAATGATCAGGCACGGCTTTTGGAGAATCATATTAAGAAAGAGCTCACCGAGAATAGTCAACTTGTCCAGGCAATTCCTAGCCATGAACAAAATAAACTACCTTCATACGAGCCTCGAAGATCAGCTTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGTGTTCCTACATGGGCTTCACAGGTTCTTAGACAACTTGCACCTAATGTGTCGTACCGCTGCCTAGTTATGTTAGGCGTTGCTAGTATTCAGGGATTATCAGTTGCATCTTTTACTAAAGATGATGCAGAACGTCTTCTTTTCTTTTGTAATCGGCAGGAGAAAGATAACTGCTCCAAAGATATTGTTTTCTCTAGCCATCCTAGTTGGTTGATGCCTCCAGCACCTAGTCGAAAAAGATCCGAACCAGAATCATGCTCTAGAGTTAAATCTATCAATGCTAGTGGCGTGAAAGTTGAAGATAATGGCAGTGATAGGCAGAAATTAAGTTTTGCTGCAATGAGGCCAATCCCTCAGTCTCATCGCCAAAAGCTTCTCCCTTTTTCAGGATATTTTGAGGGAGAAAAATATGATGGAGACCGTGGAAAATCAAATCAGCCTCATGTTCCAATTAAGCACAATGGTTTAGGTCCTCGTTCAGTTACAAACAGAAAATCTGTGTCAAACTCGTTTCAAGCTCACCAGATAATATCTTTGAATCCACTACCAATGAAAAAACATGGCTGCGACAGAGCTCCAATACGAGTTTGCTCAGAGGAGGAATTCCTGAAGGATGTAATGCAATTTCTGGTTCTTCGAGGGCATACTCGCCTCATTCCACAAGGTGGCCTTGCTGAGTTCCCTGATGCCGTTCTGAATGCTAAACGTCTGGATCTTTTTAACTTGTATAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGGAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGAGCAATCACACTCTGACACATAGAATGACAGGTGTTGGCAATACACTCAAAAGACATTACGAAACTTATCTTTTAGAATATGAATTAGCTCATGATGATGTAGATGGCGAATGCTGCTTATTGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGTGGTATGTGTGGTGAGTGGGCTCATTTTGGTTGTGATAGGCGGCAAGGACTCGGAGCATTTAAGGTATTATTAATCAACAATATCAGGCTAAGTTGCAACTATCTATGCTATTTGAATCCTTCTGCCAACTTTATTTTGACTACGCGAAAACTGATGGGCTGGAGTACGTTTGTCCACACTGCAGCATGTCAAATTTCAGTAAAAAATCGCAGAAAACTGCAAATGGTTATTAACAGGTTAAACAATGCTGTTTCTTTCCTAGAGCCAATGTACATGGCTAGTGTTAACAAATTTTATTCTGTTTCTGTGCTTGATCCTCAATTGGTAAAGGTAGGTTTGTAG

Protein sequence

>Msa0285450

MMFHFQGVSRHCSLLAVLSGKSHDSKQKQKQKQDDDASEDQFSSYPFPELSSFGRLEVKVLTKPTFDELARVLEQLQPDFVYLQGQQLDDSGEIGSFVWEDFDLSTPEALCGLFSSKLPNTVYLETPKGEKLAEALHSKGVPYTIYWKNEFSKYAASHFHQAFFSVAQSTSSHTWDAFQLAQSSFRLYCVQNEVIPHNSQKGSGKPGPKILGEPPNIEVGPCEADTKEEEEDSPETSSSIKIYDDDVNTRFLLCGFPCTVDACLLESLEDGLNALLCTEIRGCKLQNRTSAPPPPLQAATFSRSVVTMRCDISTSSSAHISLLVSGSADACFNDQARLLENHIKKELTENSQLVQAIPSHEQNKLPSYEPRRSASVACGSSVFEVCMRVPTWASQVLRQLAPNVSYRCLVMLGVASIQGLSVASFTKDDAERLLFFCNRQEKDNCSKDIVFSSHPSWLMPPAPSRKRSEPESCSRVKSINASGVKVEDNGSDRQKLSFAAMRPIPQSHRQKLLPFSGYFEGEKYDGDRGKSNQPHVPIKHNGLGPRSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRVCSEEEFLKDVMQFLVLRGHTRLIPQGGLAEFPDAVLNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMSNHTLTHRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGMCGEWAHFGCDRRQGLGAFKVLLINNIRLSCNYLCYLNPSANFILTTRKLMGWSTFVHTAACQISVKNRRKLQMVINRLNNAVSFLEPMYMASVNKFYSVSVLDPQLVKVGL*