AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0731940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731940 MtrunA17_Chr5g0426721 93.889 180 10 1 1 180 139 317 2.42e-95 292
Msa0731940 MtrunA17_Chr4g0050551 53.968 189 47 2 178 327 223 410 9.47e-53 185
Msa0731940 MtrunA17_Chr4g0050551 43.836 219 67 4 350 512 206 424 2.89e-46 167
Msa0731940 MtrunA17_Chr5g0426661 91.150 113 10 0 68 180 46 158 1.87e-46 159
Msa0731940 MtrunA17_Chr7g0218121 48.087 183 55 3 184 327 104 285 1.41e-43 157
Msa0731940 MtrunA17_Chr7g0218121 65.421 107 36 1 405 510 191 297 2.29e-42 154
Msa0731940 MtrunA17_Chr3g0132461 49.524 210 69 2 5 179 129 336 6.52e-43 155
Msa0731940 MtrunA17_Chr5g0426671 75.000 76 18 1 178 253 18 92 1.39e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731940 AT5G39410.1 42.222 180 64 3 181 321 229 407 2.02e-35 138
Msa0731940 AT5G39410.1 55.963 109 47 1 405 512 319 427 9.24e-34 133
Msa0731940 AT4G09060.1 42.331 163 83 4 20 178 174 329 1.74e-18 87.4
Msa0731940 AT4G09060.2 42.331 163 83 4 20 178 200 355 2.26e-18 87.4
Msa0731940 AT1G14680.1 38.298 141 75 4 26 163 152 283 8.72e-15 75.5

Find 153 sgRNAs with CRISPR-Local

Find 957 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATAACCGGACCGAAAA+TGG 0.135273 5_1:+43616082 Msa0731940:CDS
TACCATAGGCTTTGCTCTTT+TGG 0.201170 5_1:-43616754 None:intergenic
TTGATGAAATCGTCGATTTC+CGG 0.212466 5_1:-43605865 None:intergenic
TCATTTAAGATGTGGTTTAT+TGG 0.212988 5_1:+43615993 Msa0731940:CDS
GTCTTCTACATATGAATTCT+TGG 0.213648 5_1:+43608333 Msa0731940:CDS
TATTACTTCATTTGTACTTT+AGG 0.272074 5_1:-43618440 None:intergenic
TGTTGAGGAGAATCAGAAAT+TGG 0.278657 5_1:+43606176 Msa0731940:five_prime_UTR
GAAGCTTGATGTCGAGGGTT+TGG 0.291158 5_1:-43605927 None:intergenic
GAGAATAACCGAACTCGAAA+TGG 0.305698 5_1:+43618839 Msa0731940:CDS
TGATGAAATCGTCGATTTCC+GGG 0.309987 5_1:-43605864 None:intergenic
TGTTCTATTATTTGTTCTTT+AGG 0.311047 5_1:-43615621 None:intergenic
ATAGAACACGAGAAGAAAAT+TGG 0.317742 5_1:+43615636 Msa0731940:CDS
AAGCTTGATGTCGAGGGTTT+GGG 0.319462 5_1:-43605926 None:intergenic
TACCTTGGCAGATGTACTAT+TGG 0.320559 5_1:-43612580 None:intergenic
CGAGCTACTTGTCTTTGAAT+TGG 0.327323 5_1:-43612710 None:intergenic
TGAAGAGTTGGAACGTGATT+TGG 0.338671 5_1:+43616680 Msa0731940:CDS
AAAAGGACAAAGAGCATCTA+AGG 0.339255 5_1:+43612338 Msa0731940:CDS
GAGTTTGCTTGACTCTCTTT+TGG 0.341432 5_1:+43608288 Msa0731940:CDS
TGAGGAGTTGGAACGTGATT+TGG 0.358402 5_1:+43606335 Msa0731940:five_prime_UTR
CAATCCATCGACCACTCTTT+AGG 0.359406 5_1:+43605889 Msa0731940:five_prime_UTR
TGATTTGGTTATGTATCAAT+TGG 0.363755 5_1:+43606350 Msa0731940:exon
ATCCCGAAACAGTTCCAAAA+AGG 0.365143 5_1:+43615763 Msa0731940:CDS
ATCTGTTGAAAATAGCATAT+TGG 0.366775 5_1:+43612488 Msa0731940:CDS
TCAGCAGATGCAACTGTTGT+TGG 0.372056 5_1:+43615684 Msa0731940:CDS
CGAGAAGAAAATTGGCCTTT+GGG 0.374802 5_1:+43615644 Msa0731940:CDS
ACGAGAAGAAAATTGGCCTT+TGG 0.382134 5_1:+43615643 Msa0731940:CDS
CTAGGTAGTTGCAGCGAAAA+TGG 0.382765 5_1:+43618699 Msa0731940:CDS
GAAAGTAGTCATAGAGAATC+TGG 0.386490 5_1:+43612546 Msa0731940:CDS
GTCGAGGGTTTGGGAGGAGA+TGG 0.389737 5_1:-43605917 None:intergenic
ATGAAAATTGAAAAGTAAAT+CGG 0.391300 5_1:-43605805 None:intergenic
CATACATGTTTGTAGATTCC+AGG 0.394755 5_1:+43618410 Msa0731940:intron
GCACACTCAATCATAATTAT+CGG 0.396947 5_1:-43618876 None:intergenic
AAGAAGCCATCTTCCAAAAC+TGG 0.397330 5_1:-43618652 None:intergenic
CTCGTTATAACTACTATGTC+AGG 0.398478 5_1:-43616062 None:intergenic
GGGAAGAGACATGGTGGTGG+TGG 0.398535 5_1:-43605842 None:intergenic
AAGAGACATGGTGGTGGTGG+TGG 0.403914 5_1:-43605839 None:intergenic
GTTGGGGCATTGTAGAAAAC+TGG 0.404992 5_1:+43606218 Msa0731940:five_prime_UTR
TTTAGGTTCAAAATATTTGT+TGG 0.405456 5_1:+43615819 Msa0731940:CDS
CTCGTTATAACTTCCACGTC+AGG 0.405491 5_1:-43618819 None:intergenic
GCGGAGTGTGAGAATCTGTT+GGG 0.406528 5_1:+43606201 Msa0731940:five_prime_UTR
CCTTGGATTGTTCGATGAGT+TGG 0.415693 5_1:-43606022 None:intergenic
TACTAAGGTTGACTCTTCTT+CGG 0.416932 5_1:+43608246 Msa0731940:intron
CATTGAAAATTTAACCCAAC+GGG 0.429793 5_1:+43605671 Msa0731940:five_prime_UTR
TACATCACCCATTTCGAGTT+CGG 0.431063 5_1:-43618847 None:intergenic
TCATTCAAGATATGGTGTAT+TGG 0.432832 5_1:+43618750 Msa0731940:CDS
AATGAGAGTCTTGCTGCAAA+TGG 0.437219 5_1:+43618786 Msa0731940:CDS
AGAATAACCGGACCGAAAAT+GGG 0.442086 5_1:+43616083 Msa0731940:CDS
TTAGGTTCAAAATATTTGTT+GGG 0.442419 5_1:+43615820 Msa0731940:CDS
CAGGGAGGAGTTTATTCTCC+AGG 0.446809 5_1:+43618930 Msa0731940:CDS
GTAGTTATAACGAGAATAAC+CGG 0.453340 5_1:+43616071 Msa0731940:CDS
TGAAAATAGCATATTGGAAA+AGG 0.455763 5_1:+43612494 Msa0731940:CDS
AGAATAACCGAACTCGAAAT+GGG 0.463040 5_1:+43618840 Msa0731940:CDS
CTATTATTTGTTCTTTAGGA+AGG 0.463358 5_1:-43615617 None:intergenic
TTATGTAGTTTCGGCGAGAA+TGG 0.467929 5_1:+43615942 Msa0731940:intron
TCGAGGGTTTGGGAGGAGAT+GGG 0.471014 5_1:-43605916 None:intergenic
TCTTCTTCGGCAAGCACACA+TGG 0.474846 5_1:+43608259 Msa0731940:CDS
CTTTCCACTTCCTCTTCAGA+AGG 0.476387 5_1:-43615966 None:intergenic
TGAATTGATGTCTCTAGAAA+AGG 0.480662 5_1:+43612321 Msa0731940:CDS
TCAATACCGATTCATTCTCT+TGG 0.482581 5_1:-43606389 None:intergenic
ATTATTTGTTCTTTAGGAAG+GGG 0.487317 5_1:-43615615 None:intergenic
TTGAAATCTCACGAGCCGTT+GGG 0.488954 5_1:-43605707 None:intergenic
GGCGGAGTGTGAGAATCTGT+TGG 0.490375 5_1:+43606200 Msa0731940:five_prime_UTR
CGGGATTCTCGTTCAACCCA+GGG 0.490812 5_1:-43615746 None:intergenic
AATGAGAGTCTTGCTGCAAA+TGG 0.494589 5_1:+43616029 Msa0731940:CDS
TGGCCCTTCTGAAGAGGAAG+TGG 0.502014 5_1:+43615962 Msa0731940:CDS
TGGTCCTTCTGAAGAGGAAG+TGG 0.502014 5_1:+43618719 Msa0731940:CDS
TTCATTTGTACTTTAGGAAG+GGG 0.502501 5_1:-43618434 None:intergenic
AAGTAGCTCGATGGCGAAGA+AGG 0.505159 5_1:+43612723 Msa0731940:CDS
TGATTTGGTTATTCATCAGA+TGG 0.506867 5_1:+43616695 Msa0731940:CDS
GGCGCGAAGCTTGATGTCGA+GGG 0.510412 5_1:-43605932 None:intergenic
ATGTACAGAGTTACTTTGCA+AGG 0.512458 5_1:-43612794 None:intergenic
TATCCATCAGTCTTTATCCT+AGG 0.512644 5_1:+43618681 Msa0731940:CDS
ACTTCATTTGTACTTTAGGA+AGG 0.515758 5_1:-43618436 None:intergenic
GAACATGCGAATGGTCTCCC+TGG 0.516678 5_1:+43615729 Msa0731940:CDS
TCGAAAAGAAACGAATTACC+AGG 0.520224 5_1:+43618911 Msa0731940:CDS
TATTATTTGTTCTTTAGGAA+GGG 0.525991 5_1:-43615616 None:intergenic
AAGATGTGGTTTATTGGACA+TGG 0.528185 5_1:+43615999 Msa0731940:CDS
CTTCATTTGTACTTTAGGAA+GGG 0.529593 5_1:-43618435 None:intergenic
ATTGAAATCTCACGAGCCGT+TGG 0.534390 5_1:-43605708 None:intergenic
CTAAAATGTACAGCCTTCAC+AGG 0.537984 5_1:-43615801 None:intergenic
TCGGGATTCTCGTTCAACCC+AGG 0.539177 5_1:-43615747 None:intergenic
CACCACCATGTCTCTTCCCC+CGG 0.543748 5_1:+43605846 Msa0731940:five_prime_UTR
AACGTGCTTCATTCAAGATA+TGG 0.552409 5_1:+43618742 Msa0731940:CDS
TGTACTTTAGGAAGGGGACC+TGG 0.555048 5_1:-43618428 None:intergenic
AGGCGCGAAGCTTGATGTCG+AGG 0.555234 5_1:-43605933 None:intergenic
GACCAAAAGAGCAAAGCCTA+TGG 0.555419 5_1:+43616752 Msa0731940:CDS
CGTTCCACTTCCTCTTCAGA+AGG 0.557385 5_1:-43618723 None:intergenic
TAACCTCGACAGAGCTGAAG+AGG 0.559410 5_1:+43612363 Msa0731940:CDS
CTGGAGAATAAACTCCTCCC+TGG 0.560506 5_1:-43618929 None:intergenic
GGAGCGAAGCGTTCTGATCG+TGG 0.562697 5_1:-43605978 None:intergenic
AGCTGCTGTCAATGTGGAGC+GGG 0.565123 5_1:+43608386 Msa0731940:CDS
AAGATATGGTGTATTGGACA+TGG 0.566466 5_1:+43618756 Msa0731940:CDS
GGCGATAAAGAAATTTGTTG+AGG 0.569108 5_1:+43606161 Msa0731940:five_prime_UTR
AGCTGAAGAACGAGCGAGGG+AGG 0.574192 5_1:+43616644 Msa0731940:CDS
GATGAAATCGTCGATTTCCG+GGG 0.574596 5_1:-43605863 None:intergenic
CAAAGAAGTACAAGAGCACT+CGG 0.574644 5_1:-43616134 None:intergenic
AAAGTGCTTCATTTAAGATG+TGG 0.575121 5_1:+43615985 Msa0731940:CDS
AAGGGTGACAATCCTTGTCT+AGG 0.578233 5_1:-43612775 None:intergenic
GTTCAATCCGAGGAGACCAT+TGG 0.578363 5_1:-43618560 None:intergenic
GGTGGAAGTGAGAGCTGTAG+AGG 0.580763 5_1:-43605784 None:intergenic
AACATGCGAATGGTCTCCCT+GGG 0.581277 5_1:+43615730 Msa0731940:CDS
ATGTCGCCAAGAGAATGAAT+CGG 0.582255 5_1:+43606383 Msa0731940:CDS
CTACCTAGGATAAAGACTGA+TGG 0.584172 5_1:-43618684 None:intergenic
CTTGATGTCGAGGGTTTGGG+AGG 0.585010 5_1:-43605923 None:intergenic
TCATTGAAAATTTAACCCAA+CGG 0.585592 5_1:+43605670 Msa0731940:five_prime_UTR
CGAAAATGGTCCTTCTGAAG+AGG 0.586259 5_1:+43618713 Msa0731940:CDS
CGAGAATGGCCCTTCTGAAG+AGG 0.588059 5_1:+43615956 Msa0731940:CDS
TATTGGAAAAGGAGAACAGA+AGG 0.588297 5_1:+43612505 Msa0731940:CDS
TGAAGCTGAAGAACGAGCGA+GGG 0.591551 5_1:+43616641 Msa0731940:CDS
TGGGATTCTCGTTCAATCCG+AGG 0.591638 5_1:-43618570 None:intergenic
AAAATTGAAAAGTAAATCGG+TGG 0.591856 5_1:-43605802 None:intergenic
GTGTTTGCGAGCTGAGGAGT+TGG 0.593637 5_1:+43606323 Msa0731940:five_prime_UTR
TTGTTTGCGAGCTGAAGAGT+TGG 0.596147 5_1:+43616668 Msa0731940:CDS
GAGAAGAAAATTGGCCTTTG+GGG 0.597698 5_1:+43615645 Msa0731940:CDS
TTTCCACTTCCTCTTCAGAA+GGG 0.598633 5_1:-43615965 None:intergenic
CTTCTTCGGCAAGCACACAT+GGG 0.598949 5_1:+43608260 Msa0731940:CDS
ATGAAGCTGAAGAACGAGCG+AGG 0.599961 5_1:+43616640 Msa0731940:CDS
TTTCTAACAGAACACGCCAA+TGG 0.603227 5_1:+43618544 Msa0731940:intron
TGAAGCTGAAGAACAAGCGA+GGG 0.604182 5_1:+43606296 Msa0731940:five_prime_UTR
GAACACGCCAATGGTCTCCT+CGG 0.607416 5_1:+43618553 Msa0731940:intron
CCAACTCATCGAACAATCCA+AGG 0.607467 5_1:+43606022 Msa0731940:five_prime_UTR
CCTCGACAGAGCTGAAGAGG+AGG 0.608059 5_1:+43612366 Msa0731940:CDS
TACCAATAGTACATCTGCCA+AGG 0.612710 5_1:+43612578 Msa0731940:CDS
ATTCTAACAGAACATGCGAA+TGG 0.616870 5_1:+43615720 Msa0731940:CDS
AGCTGAAGAACAAGCGAGGG+AGG 0.619895 5_1:+43606299 Msa0731940:five_prime_UTR
CCTCCTCTTCAGCTCTGTCG+AGG 0.622887 5_1:-43612366 None:intergenic
TTCAAAGACAAGTAGCTCGA+TGG 0.623390 5_1:+43612714 Msa0731940:CDS
GCATTGTAGAAAACTGGAGA+AGG 0.625925 5_1:+43606224 Msa0731940:five_prime_UTR
GGAGAATCAGAAATTGGCGG+CGG 0.627151 5_1:+43606182 Msa0731940:five_prime_UTR
TGAGGAGAATCAGAAATTGG+CGG 0.627278 5_1:+43606179 Msa0731940:five_prime_UTR
TGTACAGAGTTACTTTGCAA+GGG 0.631169 5_1:-43612793 None:intergenic
ATTGAAGAGATGCGATGCGA+TGG 0.632923 5_1:-43605752 None:intergenic
GGAGGCGTGTTTGCGAGCTG+AGG 0.637109 5_1:+43606317 Msa0731940:five_prime_UTR
TTCTTCGGCAAGCACACATG+GGG 0.638857 5_1:+43608261 Msa0731940:CDS
AATGGGTTATGTAACGACAC+TGG 0.639564 5_1:+43616100 Msa0731940:CDS
CGGAGTGTGAGAATCTGTTG+GGG 0.643108 5_1:+43606202 Msa0731940:five_prime_UTR
AAGACCTAAAGAGTGGTCGA+TGG 0.643999 5_1:-43605893 None:intergenic
GATTCAGTATCACCTAGACA+AGG 0.646511 5_1:+43612763 Msa0731940:CDS
TGGAAACTCAAAACCTGACG+TGG 0.646702 5_1:+43618806 Msa0731940:CDS
ATGAAGCTGAAGAACAAGCG+AGG 0.647436 5_1:+43606295 Msa0731940:five_prime_UTR
GTGGAAGTGAGAGCTGTAGA+GGG 0.648569 5_1:-43605783 None:intergenic
GTAGTGTTGTTATTCCCCAA+AGG 0.653457 5_1:-43615659 None:intergenic
AAGGTTAGTGATGAAATACA+AGG 0.658115 5_1:+43612524 Msa0731940:CDS
GTAGCTTAAAGCAATCAACT+CGG 0.659694 5_1:+43612278 Msa0731940:intron
GTAGTCATAGAGAATCTGGT+GGG 0.663313 5_1:+43612550 Msa0731940:CDS
CGAAAAGAAACGAATTACCA+GGG 0.663991 5_1:+43618912 Msa0731940:CDS
AGTAGTCATAGAGAATCTGG+TGG 0.664758 5_1:+43612549 Msa0731940:CDS
AGATGGGAAGACCTAAAGAG+TGG 0.668747 5_1:-43605900 None:intergenic
TGAAGCGTGTGTGAATGCGC+TGG 0.669437 5_1:+43606140 Msa0731940:five_prime_UTR
ATGAAATCGTCGATTTCCGG+GGG 0.686082 5_1:-43605862 None:intergenic
ATTGAACGAGAATCCCAAGA+CGG 0.724950 5_1:+43618576 Msa0731940:CDS
AAGCTGCTGTCAATGTGGAG+CGG 0.726336 5_1:+43608385 Msa0731940:CDS
AAAGAAACGAATTACCAGGG+AGG 0.779930 5_1:+43618915 Msa0731940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAAAAACTATTTCT+TGG - chr5_1:43606089-43606108 None:intergenic 10.0%
!!! TAATTTTCTTAAATTACTAT+TGG + chr5_1:43606731-43606750 Msa0731940:intron 10.0%
!! AAAACTTAAAAATATAGTAA+AGG - chr5_1:43607050-43607069 None:intergenic 10.0%
!!! ATATTTACTTTATTTTACTA+AGG + chr5_1:43608231-43608250 Msa0731940:intron 10.0%
!! AAAAGAATAATGTAAAAATA+AGG - chr5_1:43608456-43608475 None:intergenic 10.0%
!! ATGCAAATTAATTATTTAAA+AGG - chr5_1:43612667-43612686 None:intergenic 10.0%
!!! AAGATAAATTCAATTTTAAA+CGG - chr5_1:43613465-43613484 None:intergenic 10.0%
!! ATGAAAATTGAAAAGTAAAT+CGG - chr5_1:43605808-43605827 None:intergenic 15.0%
!!! TCTTTTTTTTAAGTTTTTGA+AGG - chr5_1:43606002-43606021 None:intergenic 15.0%
!! ATAATAGTAATAATTATGGA+GGG - chr5_1:43606059-43606078 None:intergenic 15.0%
!! AATAATAGTAATAATTATGG+AGG - chr5_1:43606060-43606079 None:intergenic 15.0%
!!! TTTTTTTTGATTTTCTTCTT+TGG + chr5_1:43606104-43606123 Msa0731940:intron 15.0%
!! CAAAAATCTATTAAAAGATA+GGG - chr5_1:43606883-43606902 None:intergenic 15.0%
!! ACAAAAATCTATTAAAAGAT+AGG - chr5_1:43606884-43606903 None:intergenic 15.0%
!! TGTATAAAAATAAGTTGTTT+AGG + chr5_1:43606913-43606932 Msa0731940:intron 15.0%
!! GTATAAAAATAAGTTGTTTA+GGG + chr5_1:43606914-43606933 Msa0731940:intron 15.0%
!! TTAGTAAGAAATTGATTAAA+TGG + chr5_1:43607321-43607340 Msa0731940:intron 15.0%
!! TATATTCTAATAATACTTGT+AGG + chr5_1:43607428-43607447 Msa0731940:intron 15.0%
!!! AACTTTTTTTCGAAAAATAA+AGG - chr5_1:43607610-43607629 None:intergenic 15.0%
!! AAATTCAAAATTGTTCAATT+AGG + chr5_1:43609021-43609040 Msa0731940:intron 15.0%
!! AAAGAAATAGTATTATTGAT+TGG - chr5_1:43609143-43609162 None:intergenic 15.0%
!! AAATTCAAAATTGTTCAATT+AGG + chr5_1:43609021-43609040 Msa0731940:intron 15.0%
!! AAAGAAATAGTATTATTGAT+TGG - chr5_1:43609143-43609162 None:intergenic 15.0%
!! ATAATAATATTCCAATTGAT+AGG - chr5_1:43610388-43610407 None:intergenic 15.0%
!! AAATTCAAAATTGTTCAATT+AGG - chr5_1:43609021-43609040 None:intergenic 15.0%
!! CAAATTAATTATTTAAAAGG+AGG - chr5_1:43612664-43612683 None:intergenic 15.0%
!!! ATTAATTTTTCAAAAGAAAG+AGG + chr5_1:43613032-43613051 Msa0731940:intron 15.0%
!!! CAATAATTCGATAATTTTAA+GGG - chr5_1:43613067-43613086 None:intergenic 15.0%
!!! TCAATAATTCGATAATTTTA+AGG - chr5_1:43613068-43613087 None:intergenic 15.0%
!!! TTGTCATGTAATTTATTTTT+TGG + chr5_1:43613150-43613169 Msa0731940:intron 15.0%
!! TTATAGAAAATTATTAAAGG+TGG + chr5_1:43613410-43613429 Msa0731940:intron 15.0%
!!! TCATTTATATTCAATCTTTT+CGG + chr5_1:43613979-43613998 Msa0731940:intron 15.0%
!! AAAAATAAAAAATGGTTCTT+TGG + chr5_1:43614168-43614187 Msa0731940:intron 15.0%
!! AATATTTGTAGAGATATTTA+AGG + chr5_1:43614681-43614700 Msa0731940:intron 15.0%
!!! CAATATTTTAACATTCAAAA+TGG - chr5_1:43615467-43615486 None:intergenic 15.0%
!! AAACAAAAATATATTACACA+AGG - chr5_1:43615554-43615573 None:intergenic 15.0%
!!! TAACATTTTGATAATGTTAT+TGG + chr5_1:43617959-43617978 Msa0731940:intron 15.0%
!! ATGATTAATCAACATTAAAT+TGG - chr5_1:43618136-43618155 None:intergenic 15.0%
!! AAAATAAAGTCAATTATACA+AGG - chr5_1:43618325-43618344 None:intergenic 15.0%
!! ATAAAATTATTGAAGAGAAA+TGG - chr5_1:43619144-43619163 None:intergenic 15.0%
!! ACTTAAAAATATAGTAAAGG+AGG - chr5_1:43607047-43607066 None:intergenic 20.0%
!!! ATTTTTAAGTTTTCCCATAT+TGG + chr5_1:43607057-43607076 Msa0731940:intron 20.0%
!!! TTTTTAAGTTTTCCCATATT+GGG + chr5_1:43607058-43607077 Msa0731940:intron 20.0%
!! ATATAAAAATATTCAGCATG+AGG - chr5_1:43607413-43607432 None:intergenic 20.0%
!!! TAATTTTTCCTCTTAATTGA+TGG + chr5_1:43607581-43607600 Msa0731940:intron 20.0%
!!! AGTATTTGGAATTTCATTTT+CGG + chr5_1:43607663-43607682 Msa0731940:intron 20.0%
!! AAGCGAAATTATTAAAATAC+TGG - chr5_1:43607920-43607939 None:intergenic 20.0%
!!! TATAGGTATTTGTATTGATT+AGG + chr5_1:43608892-43608911 Msa0731940:intron 20.0%
!!! TCTTTTGATTCTCTTTAATT+TGG + chr5_1:43609158-43609177 Msa0731940:intron 20.0%
!!! CTTTTGATTCTCTTTAATTT+GGG + chr5_1:43609159-43609178 Msa0731940:intron 20.0%
!! TATAAACTATCACAATTTAC+TGG + chr5_1:43609262-43609281 Msa0731940:intron 20.0%
!! ATAAACTATCACAATTTACT+GGG + chr5_1:43609263-43609282 Msa0731940:intron 20.0%
!! TTAGCATATTGTATAATATG+CGG + chr5_1:43610076-43610095 Msa0731940:intron 20.0%
!!! TCTTTTGATTCTCTTTAATT+TGG + chr5_1:43609158-43609177 Msa0731940:intron 20.0%
!!! CTTTTGATTCTCTTTAATTT+GGG + chr5_1:43609159-43609178 Msa0731940:intron 20.0%
!! TTAGCATATTGTATAATATG+CGG - chr5_1:43610076-43610095 None:intergenic 20.0%
!!! TATTTTCTTTGTAAGAGAAA+AGG - chr5_1:43610840-43610859 None:intergenic 20.0%
!! ATCCTTAATGTATTTAGATT+GGG + chr5_1:43611481-43611500 Msa0731940:intron 20.0%
!! TTTAGTATGTAAAACAATGA+AGG + chr5_1:43611684-43611703 Msa0731940:intron 20.0%
!! ATTGAAAGATTTACGTATTA+TGG - chr5_1:43612047-43612066 None:intergenic 20.0%
!! CAAAATCCAAATGATAATTA+GGG - chr5_1:43612259-43612278 None:intergenic 20.0%
!! ACAAAATCCAAATGATAATT+AGG - chr5_1:43612260-43612279 None:intergenic 20.0%
!!! TTTCAGTTTTTGGATTATAA+TGG + chr5_1:43612423-43612442 Msa0731940:intron 20.0%
!!! CTGTTCAGTTTTATTTAATT+TGG + chr5_1:43612636-43612655 Msa0731940:intron 20.0%
!!! GTGTTAATTTTTTAATCCTT+AGG + chr5_1:43613172-43613191 Msa0731940:intron 20.0%
!!! TTTTTTAATCCTTAGGAAAA+AGG + chr5_1:43613179-43613198 Msa0731940:intron 20.0%
!! CTAACATTTAGTTAAAAAAG+AGG + chr5_1:43613567-43613586 Msa0731940:intron 20.0%
!!! GGATTGAATTTTATCATTTT+GGG - chr5_1:43613812-43613831 None:intergenic 20.0%
!!! TGGATTGAATTTTATCATTT+TGG - chr5_1:43613813-43613832 None:intergenic 20.0%
!!! TTTTATTTTTACTGAAAGTG+AGG - chr5_1:43614152-43614171 None:intergenic 20.0%
!!! TTTGAGATTGAACAAATTAA+AGG + chr5_1:43614364-43614383 Msa0731940:intron 20.0%
!! TATTTAAGGACATATTAATG+TGG + chr5_1:43614695-43614714 Msa0731940:intron 20.0%
!! TAAGCAATCAGAAATTATAA+AGG + chr5_1:43614913-43614932 Msa0731940:intron 20.0%
!! AAGCAATCAGAAATTATAAA+GGG + chr5_1:43614914-43614933 Msa0731940:intron 20.0%
!!! ATACCTTATAATTGCTTTTA+GGG - chr5_1:43615002-43615021 None:intergenic 20.0%
!! GGTATGATATATCAAAATAA+TGG + chr5_1:43615017-43615036 Msa0731940:intron 20.0%
!! AATATAAAGTCAATTACACA+AGG - chr5_1:43615395-43615414 None:intergenic 20.0%
!!! AATATTGAATCCTCTTTTAA+TGG + chr5_1:43615480-43615499 Msa0731940:intron 20.0%
!!! TATTATTTGTTCTTTAGGAA+GGG - chr5_1:43615619-43615638 None:intergenic 20.0%
!! TGTTCTATTATTTGTTCTTT+AGG - chr5_1:43615624-43615643 None:intergenic 20.0%
!!! TTCCAAAAAGGAAAAAATTT+TGG + chr5_1:43615775-43615794 Msa0731940:CDS 20.0%
!!! TTTAGGTTCAAAATATTTGT+TGG + chr5_1:43615819-43615838 Msa0731940:CDS 20.0%
!! TTAGGTTCAAAATATTTGTT+GGG + chr5_1:43615820-43615839 Msa0731940:CDS 20.0%
!!! AAATATTTGTTGGGTATTTT+AGG + chr5_1:43615829-43615848 Msa0731940:intron 20.0%
!! AAAAACTCATGAACAATTTA+AGG + chr5_1:43616384-43616403 Msa0731940:intron 20.0%
!! AATTATTGAAGAAAAATCGA+AGG - chr5_1:43616422-43616441 None:intergenic 20.0%
!! TAATATTGAATTCATACCAT+AGG - chr5_1:43616771-43616790 None:intergenic 20.0%
!! CAATATTTGTAGAGATATTT+AGG + chr5_1:43617011-43617030 Msa0731940:intron 20.0%
!! TATTTAGGAACATAATAAAG+TGG + chr5_1:43617026-43617045 Msa0731940:intron 20.0%
!! TAAGCAATCAGAAATTATAA+AGG + chr5_1:43614913-43614932 Msa0731940:intron 20.0%
!! AAGCAATCAGAAATTATAAA+GGG + chr5_1:43614914-43614933 Msa0731940:intron 20.0%
!! AGACAATTATAAATAGAATG+TGG + chr5_1:43617414-43617433 Msa0731940:intron 20.0%
!! ACTTTAACTAATGTAATCTT+TGG + chr5_1:43617936-43617955 Msa0731940:intron 20.0%
!! TCAATGATTAATATTTGTCA+AGG + chr5_1:43618004-43618023 Msa0731940:intron 20.0%
!! ATATTAATCATTGACAAAGT+CGG - chr5_1:43617998-43618017 None:intergenic 20.0%
!! GAATCTTAAAAATAAACACA+CGG + chr5_1:43618235-43618254 Msa0731940:intron 20.0%
!! TATTACTTCATTTGTACTTT+AGG - chr5_1:43618443-43618462 None:intergenic 20.0%
!!! CAAAAATGTTTTTCTAACAA+CGG - chr5_1:43618524-43618543 None:intergenic 20.0%
!!! TTCAAAAAAGGAAAGTTTTT+TGG + chr5_1:43618599-43618618 Msa0731940:CDS 20.0%
! TCATTGAAAATTTAACCCAA+CGG + chr5_1:43605670-43605689 Msa0731940:five_prime_UTR 25.0%
! AAAATTGAAAAGTAAATCGG+TGG - chr5_1:43605805-43605824 None:intergenic 25.0%
!!! TGATTTTCTTCTTTGGTTTT+TGG + chr5_1:43606111-43606130 Msa0731940:intron 25.0%
!!! TGATTTGGTTATGTATCAAT+TGG + chr5_1:43606350-43606369 Msa0731940:exon 25.0%
!! TTGTTTAGGGTTATTTCATT+TGG + chr5_1:43606927-43606946 Msa0731940:intron 25.0%
!! TGTTTAGGGTTATTTCATTT+GGG + chr5_1:43606928-43606947 Msa0731940:intron 25.0%
!! AAATATAGTAAAGGAGGTTT+TGG - chr5_1:43607041-43607060 None:intergenic 25.0%
!! GAGTTTTCGATATTTATACA+TGG + chr5_1:43607080-43607099 Msa0731940:intron 25.0%
!! TTTTCGATATTTATACATGG+TGG + chr5_1:43607083-43607102 Msa0731940:intron 25.0%
! TTTCGATATTTATACATGGT+GGG + chr5_1:43607084-43607103 Msa0731940:intron 25.0%
! TAAGCATGTTATCGTTATTA+GGG - chr5_1:43607465-43607484 None:intergenic 25.0%
! AAATTCCAAATACTCAATGA+TGG - chr5_1:43607657-43607676 None:intergenic 25.0%
! TAAGCATGTATACTTAAGAA+TGG - chr5_1:43607875-43607894 None:intergenic 25.0%
! AATTAGATTAAGCAGTATGT+TGG - chr5_1:43607977-43607996 None:intergenic 25.0%
! ACATACTGCTTAATCTAATT+TGG + chr5_1:43607977-43607996 Msa0731940:intron 25.0%
! ATTTCGAAATTAGAGAGAAA+GGG - chr5_1:43608156-43608175 None:intergenic 25.0%
! TATTTCGAAATTAGAGAGAA+AGG - chr5_1:43608157-43608176 None:intergenic 25.0%
! TTCTCTCTAATTTCGAAATA+TGG + chr5_1:43608157-43608176 Msa0731940:intron 25.0%
! TTTCACAAGTGTTAATCATT+TGG + chr5_1:43608189-43608208 Msa0731940:intron 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG + chr5_1:43608932-43608951 Msa0731940:intron 25.0%
!!! TAATTTGTATTGATTAGGAG+CGG + chr5_1:43608937-43608956 Msa0731940:intron 25.0%
!!! GCCTTATTTATACAAACTAA+GGG - chr5_1:43610556-43610575 None:intergenic 25.0%
! TTTGTATAAATAAGGCCATT+TGG + chr5_1:43608983-43609002 Msa0731940:intron 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG + chr5_1:43608932-43608951 Msa0731940:intron 25.0%
!!! TAATTTGTATTGATTAGGAG+CGG + chr5_1:43608937-43608956 Msa0731940:intron 25.0%
!!! GCCTTATTTATACAAACTAA+GGG - chr5_1:43610556-43610575 None:intergenic 25.0%
! TTTGTATAAATAAGGCCATT+TGG + chr5_1:43608983-43609002 Msa0731940:intron 25.0%
! TTTGTATAAATAAGGCCATT+TGG - chr5_1:43608983-43609002 None:intergenic 25.0%
!!! GCCTTATTTATACAAACTAA+GGG + chr5_1:43610556-43610575 Msa0731940:intron 25.0%
!!! TAATTTGTATTGATTAGGAG+CGG - chr5_1:43608937-43608956 None:intergenic 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG - chr5_1:43608932-43608951 None:intergenic 25.0%
! TAATTCAAGAACAAAACACA+TGG - chr5_1:43610870-43610889 None:intergenic 25.0%
! TTTGTTCTTGAATTAAGAAC+AGG + chr5_1:43610875-43610894 Msa0731940:intron 25.0%
! AGGTTATCACAAAATATTTG+AGG + chr5_1:43610923-43610942 Msa0731940:intron 25.0%
! GGTTATCACAAAATATTTGA+GGG + chr5_1:43610924-43610943 Msa0731940:intron 25.0%
!!! TATATTTTTGGGTCCTAATT+TGG - chr5_1:43611086-43611105 None:intergenic 25.0%
! TATGATCAATGCAAATAGTA+TGG - chr5_1:43611444-43611463 None:intergenic 25.0%
!! ACTATTTGCATTGATCATAT+TGG + chr5_1:43611445-43611464 Msa0731940:intron 25.0%
! GATCCTTAATGTATTTAGAT+TGG + chr5_1:43611480-43611499 Msa0731940:intron 25.0%
! ATCCCAATCTAAATACATTA+AGG - chr5_1:43611486-43611505 None:intergenic 25.0%
! ATTTAGATTGGGATAAAAGT+AGG + chr5_1:43611492-43611511 Msa0731940:intron 25.0%
! TTTAGATTGGGATAAAAGTA+GGG + chr5_1:43611493-43611512 Msa0731940:intron 25.0%
!! ATTTAGTGGATAGCATAATT+CGG - chr5_1:43612126-43612145 None:intergenic 25.0%
! TTAGAACCCTAATTATCATT+TGG + chr5_1:43612250-43612269 Msa0731940:intron 25.0%
! AAAAAAGTCGACAATATAAG+GGG - chr5_1:43612406-43612425 None:intergenic 25.0%
! GAAAAAAGTCGACAATATAA+GGG - chr5_1:43612407-43612426 None:intergenic 25.0%
! TGAAAAAAGTCGACAATATA+AGG - chr5_1:43612408-43612427 None:intergenic 25.0%
! ATCTGTTGAAAATAGCATAT+TGG + chr5_1:43612488-43612507 Msa0731940:CDS 25.0%
! TGAAAATAGCATATTGGAAA+AGG + chr5_1:43612494-43612513 Msa0731940:CDS 25.0%
! TTAAGAATCAAAACCAACTT+CGG - chr5_1:43612929-43612948 None:intergenic 25.0%
! TTAAAACCATGAAAAAACAG+AGG + chr5_1:43612945-43612964 Msa0731940:intron 25.0%
! TAAAACCATGAAAAAACAGA+GGG + chr5_1:43612946-43612965 Msa0731940:intron 25.0%
!!! TTCGATAATTTTAAGGGTAA+TGG - chr5_1:43613061-43613080 None:intergenic 25.0%
! CTTACATTCTGAATTACTAT+GGG - chr5_1:43613207-43613226 None:intergenic 25.0%
! ACTTACATTCTGAATTACTA+TGG - chr5_1:43613208-43613227 None:intergenic 25.0%
! AAGTAAAAGTTTAACCAAGA+TGG + chr5_1:43613224-43613243 Msa0731940:intron 25.0%
!!! TTGCTGATGATTTTAATAGA+CGG + chr5_1:43613325-43613344 Msa0731940:intron 25.0%
! CTATTGTATTCTCAATTTCT+AGG - chr5_1:43613655-43613674 None:intergenic 25.0%
! ATTGATCATCACTTGTATAA+CGG - chr5_1:43613714-43613733 None:intergenic 25.0%
! TCACAAACGTACTTATTTAT+TGG - chr5_1:43613833-43613852 None:intergenic 25.0%
!! AATCTTTTCGGATATTCATT+TGG + chr5_1:43613991-43614010 Msa0731940:intron 25.0%
! ATCAGTAGAAACAAAAACAT+TGG + chr5_1:43614088-43614107 Msa0731940:intron 25.0%
!! GTAGGTAATTTTTGTACTTT+TGG + chr5_1:43614287-43614306 Msa0731940:intron 25.0%
! ACTGAATTGAATTTAGTGTA+AGG + chr5_1:43614579-43614598 Msa0731940:intron 25.0%
! ATACCCTAAAAGCAATTATA+AGG + chr5_1:43614996-43615015 Msa0731940:intron 25.0%
!!! CATACCTTATAATTGCTTTT+AGG - chr5_1:43615003-43615022 None:intergenic 25.0%
! AAGAAAAAGAAACATCACAA+TGG + chr5_1:43615040-43615059 Msa0731940:intron 25.0%
! AGACGATTATAAATAGATTG+TGG + chr5_1:43615072-43615091 Msa0731940:intron 25.0%
!! AACTAGAGAGAATATTGTTT+TGG + chr5_1:43615106-43615125 Msa0731940:intron 25.0%
!!! AGCTTTGTTAGTTTAAATGA+TGG + chr5_1:43615143-43615162 Msa0731940:intron 25.0%
! GCTATTGGGAATTATTATTA+GGG - chr5_1:43615279-43615298 None:intergenic 25.0%
! AGCTATTGGGAATTATTATT+AGG - chr5_1:43615280-43615299 None:intergenic 25.0%
! AATAATAATTCCCAATAGCT+TGG + chr5_1:43615280-43615299 Msa0731940:intron 25.0%
! TTTCATCTGCAATTGAATTT+AGG + chr5_1:43615441-43615460 Msa0731940:intron 25.0%
!! ATTATTTGTTCTTTAGGAAG+GGG - chr5_1:43615618-43615637 None:intergenic 25.0%
!! CTATTATTTGTTCTTTAGGA+AGG - chr5_1:43615620-43615639 None:intergenic 25.0%
!!! GACCAAAATTTTTTCCTTTT+TGG - chr5_1:43615780-43615799 None:intergenic 25.0%
!! ATTACATTTGGAATAATCCT+AGG + chr5_1:43615852-43615871 Msa0731940:intron 25.0%
! ATCTTTACCTTATGTAGTTT+CGG + chr5_1:43615933-43615952 Msa0731940:intron 25.0%
!! TCATTTAAGATGTGGTTTAT+TGG + chr5_1:43615993-43616012 Msa0731940:CDS 25.0%
! CAAAGAAACAATTTACCAAA+GGG + chr5_1:43616158-43616177 Msa0731940:intron 25.0%
! AAAGAAACAATTTACCAAAG+GGG + chr5_1:43616159-43616178 Msa0731940:intron 25.0%
! CAATAAAGACTTCAACAAAA+TGG + chr5_1:43616223-43616242 Msa0731940:intron 25.0%
! ACATTATCGAAATTTGGAAA+AGG + chr5_1:43616569-43616588 Msa0731940:intron 25.0%
! ACTGAATTGAATTTAGTGTA+AGG + chr5_1:43614579-43614598 Msa0731940:intron 25.0%
! AGAATGAGCAATTCTTAAAT+AGG + chr5_1:43617220-43617239 Msa0731940:intron 25.0%
!! ATAACTTTTTATTGCTTCGA+AGG - chr5_1:43617346-43617365 None:intergenic 25.0%
! GAAAAAAAACATCACAATGA+CGG + chr5_1:43617385-43617404 Msa0731940:intron 25.0%
!! ACTAGAGAGAATATTGTTTT+TGG + chr5_1:43615107-43615126 Msa0731940:intron 25.0%
! TATATTCATCTGCAAATTGT+TGG + chr5_1:43617835-43617854 Msa0731940:intron 25.0%
! TCACTTCTCAAAAAAACTAA+AGG + chr5_1:43619072-43619091 Msa0731940:intron 25.0%
! AATTATTGAAGAGAAATGGA+AGG - chr5_1:43619140-43619159 None:intergenic 25.0%
! TGTTGAGGAGAATTAAAAAT+TGG + chr5_1:43619239-43619258 Msa0731940:intron 25.0%
CATTGAAAATTTAACCCAAC+GGG + chr5_1:43605671-43605690 Msa0731940:five_prime_UTR 30.0%
ATACATACCCTAAATCCTAA+TGG + chr5_1:43606592-43606611 Msa0731940:intron 30.0%
ACATACACCATTAGGATTTA+GGG - chr5_1:43606602-43606621 None:intergenic 30.0%
TACATACACCATTAGGATTT+AGG - chr5_1:43606603-43606622 None:intergenic 30.0%
AAAGAACTACATACACCATT+AGG - chr5_1:43606610-43606629 None:intergenic 30.0%
TGTATCTCACACAAAAGATA+GGG - chr5_1:43606795-43606814 None:intergenic 30.0%
TTGTATCTCACACAAAAGAT+AGG - chr5_1:43606796-43606815 None:intergenic 30.0%
! ATTTGGGATATTGTTTAGTG+AGG + chr5_1:43606944-43606963 Msa0731940:intron 30.0%
! TTTGGGATATTGTTTAGTGA+GGG + chr5_1:43606945-43606964 Msa0731940:intron 30.0%
TACCAAACCTTTACTTGTTT+GGG + chr5_1:43606990-43607009 Msa0731940:intron 30.0%
CTAATATCCCAAACAAGTAA+AGG - chr5_1:43607000-43607019 None:intergenic 30.0%
ATATCGAAAACTCCCAATAT+GGG - chr5_1:43607073-43607092 None:intergenic 30.0%
AATATCGAAAACTCCCAATA+TGG - chr5_1:43607074-43607093 None:intergenic 30.0%
AAGGATGGAAAGAAAAAGAA+GGG - chr5_1:43607120-43607139 None:intergenic 30.0%
TGACTGAGTAATTTAATTGC+TGG + chr5_1:43607353-43607372 Msa0731940:intron 30.0%
GACTGAGTAATTTAATTGCT+GGG + chr5_1:43607354-43607373 Msa0731940:intron 30.0%
CTAAGCATGTTATCGTTATT+AGG - chr5_1:43607466-43607485 None:intergenic 30.0%
! TTTTACCTGAAAGTCATATG+AGG + chr5_1:43607697-43607716 Msa0731940:intron 30.0%
CATGTATACTTAAGAATGGT+GGG - chr5_1:43607871-43607890 None:intergenic 30.0%
TGCTTACCCTCATTTAAATT+TGG + chr5_1:43607889-43607908 Msa0731940:intron 30.0%
GCAAGTCCAAATTTAAATGA+GGG - chr5_1:43607898-43607917 None:intergenic 30.0%
ACTACTACTACTACTAGAAT+AGG + chr5_1:43608100-43608119 Msa0731940:intron 30.0%
TCTAATTTCGAAATATGGCT+AGG + chr5_1:43608162-43608181 Msa0731940:intron 30.0%
GTCTTCTACATATGAATTCT+TGG + chr5_1:43608333-43608352 Msa0731940:CDS 30.0%
ATGGCATCAGAGATAAAAAT+TGG - chr5_1:43608481-43608500 None:intergenic 30.0%
TTTCACTTCAAACAAGAACA+TGG - chr5_1:43608500-43608519 None:intergenic 30.0%
TTTAGTAGCAGTTAGCATAT+AGG + chr5_1:43608875-43608894 Msa0731940:intron 30.0%
!! GCCCTTAGTTTGTATAAATA+AGG + chr5_1:43608975-43608994 Msa0731940:intron 30.0%
!! GGCCTTATTTATACAAACTA+AGG - chr5_1:43610555-43610574 None:intergenic 30.0%
TGTTCAATTAGGAACCTTAT+TGG + chr5_1:43609032-43609051 Msa0731940:intron 30.0%
!!! ATTAGGAACCTTATTGGTTT+TGG + chr5_1:43609038-43609057 Msa0731940:intron 30.0%
!!! TTAGGAACCTTATTGGTTTT+GGG + chr5_1:43609039-43609058 Msa0731940:intron 30.0%
! TAATTTGGGTTCCTATCAAT+TGG + chr5_1:43609173-43609192 Msa0731940:intron 30.0%
TCCTTTCTTTCAAATTCAGA+GGG - chr5_1:43609837-43609856 None:intergenic 30.0%
CAAATATGCAACTTTGTATG+TGG + chr5_1:43609861-43609880 Msa0731940:intron 30.0%
!! ATGCGGTATTTGTATTGATT+AGG + chr5_1:43610093-43610112 Msa0731940:intron 30.0%
!! GCCCTTAGTTTGTATAAATA+AGG + chr5_1:43608975-43608994 Msa0731940:intron 30.0%
!! GGCCTTATTTATACAAACTA+AGG - chr5_1:43610555-43610574 None:intergenic 30.0%
TGTTCAATTAGGAACCTTAT+TGG + chr5_1:43609032-43609051 Msa0731940:intron 30.0%
!!! ATTAGGAACCTTATTGGTTT+TGG + chr5_1:43609038-43609057 Msa0731940:intron 30.0%
!!! TTAGGAACCTTATTGGTTTT+GGG + chr5_1:43609039-43609058 Msa0731940:intron 30.0%
! TAATTTGGGTTCCTATCAAT+TGG + chr5_1:43609173-43609192 Msa0731940:intron 30.0%
!!! TTAGGAACCTTATTGGTTTT+GGG - chr5_1:43609039-43609058 None:intergenic 30.0%
!!! ATTAGGAACCTTATTGGTTT+TGG - chr5_1:43609038-43609057 None:intergenic 30.0%
TGTTCAATTAGGAACCTTAT+TGG - chr5_1:43609032-43609051 None:intergenic 30.0%
!! GGCCTTATTTATACAAACTA+AGG + chr5_1:43610555-43610574 Msa0731940:intron 30.0%
!! GCCCTTAGTTTGTATAAATA+AGG - chr5_1:43608975-43608994 None:intergenic 30.0%
TTGAATTAAGAACAGGATTG+TGG + chr5_1:43610882-43610901 Msa0731940:intron 30.0%
TGAATTAAGAACAGGATTGT+GGG + chr5_1:43610883-43610902 Msa0731940:intron 30.0%
!! CATCTGGAGCATATATTTTT+GGG - chr5_1:43611097-43611116 None:intergenic 30.0%
!! ACATCTGGAGCATATATTTT+TGG - chr5_1:43611098-43611117 None:intergenic 30.0%
GAATCCTCAGATATTTACAA+GGG - chr5_1:43611229-43611248 None:intergenic 30.0%
AGAATCCTCAGATATTTACA+AGG - chr5_1:43611230-43611249 None:intergenic 30.0%
TCATACTTCAGATCTATAGT+TGG - chr5_1:43611359-43611378 None:intergenic 30.0%
! AACTATAGATCTGAAGTATG+AGG + chr5_1:43611358-43611377 Msa0731940:intron 30.0%
! ACTATAGATCTGAAGTATGA+GGG + chr5_1:43611359-43611378 Msa0731940:intron 30.0%
!! GGAACCAAATTTTGATAACT+TGG + chr5_1:43611397-43611416 Msa0731940:intron 30.0%
AGCACCAAGTTATCAAAATT+TGG - chr5_1:43611404-43611423 None:intergenic 30.0%
!!! AAATTTTGATAACTTGGTGC+TGG + chr5_1:43611403-43611422 Msa0731940:intron 30.0%
AAATAGTATGGCTTCATCAA+TGG - chr5_1:43611432-43611451 None:intergenic 30.0%
! GGATTATTTTCTTGGAATAG+AGG - chr5_1:43611540-43611559 None:intergenic 30.0%
! AATTCTCTCTAAAGGATTTG+GGG - chr5_1:43611567-43611586 None:intergenic 30.0%
! GAATTCTCTCTAAAGGATTT+GGG - chr5_1:43611568-43611587 None:intergenic 30.0%
! AGAATTCTCTCTAAAGGATT+TGG - chr5_1:43611569-43611588 None:intergenic 30.0%
!!! TAAATCACATGGTGGATTTT+AGG + chr5_1:43612141-43612160 Msa0731940:intron 30.0%
TAGCATATTGTGGAAAATAG+TGG - chr5_1:43612171-43612190 None:intergenic 30.0%
GTGTTATCAATAGCATATTG+TGG - chr5_1:43612181-43612200 None:intergenic 30.0%
! TGAATTGATGTCTCTAGAAA+AGG + chr5_1:43612321-43612340 Msa0731940:CDS 30.0%
AAAAAGTCGACAATATAAGG+GGG - chr5_1:43612405-43612424 None:intergenic 30.0%
!!! TGTCGACTTTTTTCAGTTTT+TGG + chr5_1:43612413-43612432 Msa0731940:intron 30.0%
! TTATAATGGAATGACTGACT+TGG + chr5_1:43612437-43612456 Msa0731940:intron 30.0%
AAGGTTAGTGATGAAATACA+AGG + chr5_1:43612524-43612543 Msa0731940:CDS 30.0%
! ATATTTTCATTTGCCGAAGT+TGG + chr5_1:43612913-43612932 Msa0731940:intron 30.0%
AATAACACGTAAAACCATCT+TGG - chr5_1:43613241-43613260 None:intergenic 30.0%
! TGTTACCCTTTCAAGATTTT+CGG + chr5_1:43613285-43613304 Msa0731940:intron 30.0%
TACAACCGAAAATCTTGAAA+GGG - chr5_1:43613293-43613312 None:intergenic 30.0%
TTACAACCGAAAATCTTGAA+AGG - chr5_1:43613294-43613313 None:intergenic 30.0%
CTAGGATTCTCTTAACTTAA+GGG - chr5_1:43613637-43613656 None:intergenic 30.0%
! TCTAGGATTCTCTTAACTTA+AGG - chr5_1:43613638-43613657 None:intergenic 30.0%
AATACAATAGAGCGATAAGT+AGG + chr5_1:43613665-43613684 Msa0731940:intron 30.0%
ATACAATAGAGCGATAAGTA+GGG + chr5_1:43613666-43613685 Msa0731940:intron 30.0%
TTGATCATCACTTGTATAAC+GGG - chr5_1:43613713-43613732 None:intergenic 30.0%
TCATTTGGAAACAATAGCAT+TGG + chr5_1:43614006-43614025 Msa0731940:intron 30.0%
!!! AAAGTGAGGTTAGTTTTGAT+AGG - chr5_1:43614138-43614157 None:intergenic 30.0%
ATATGAGTTTCATAGGTAGA+CGG + chr5_1:43614541-43614560 Msa0731940:intron 30.0%
AAAAAGAAACATCACAATGG+CGG + chr5_1:43615043-43615062 Msa0731940:intron 30.0%
AGTTACATTTGTAACAAGCT+TGG + chr5_1:43615209-43615228 Msa0731940:intron 30.0%
!!! TTTCCTTTTTGGAACTGTTT+CGG - chr5_1:43615769-43615788 None:intergenic 30.0%
!!! GGGTATTTTAGGATTACATT+TGG + chr5_1:43615840-43615859 Msa0731940:intron 30.0%
! GGAATAATCCTAGGTATTTT+AGG + chr5_1:43615861-43615880 Msa0731940:intron 30.0%
CTACATAAGGTAAAGATTGA+AGG - chr5_1:43615930-43615949 None:intergenic 30.0%
! AAAGTGCTTCATTTAAGATG+TGG + chr5_1:43615985-43616004 Msa0731940:CDS 30.0%
GTAGTTATAACGAGAATAAC+CGG + chr5_1:43616071-43616090 Msa0731940:CDS 30.0%
! CCTTTGGTAAATTGTTTCTT+TGG - chr5_1:43616160-43616179 None:intergenic 30.0%
CCAAAGAAACAATTTACCAA+AGG + chr5_1:43616157-43616176 Msa0731940:intron 30.0%
AAGAAACAATTTACCAAAGG+GGG + chr5_1:43616160-43616179 Msa0731940:intron 30.0%
TTACATCCATGTGTTGTATT+TGG + chr5_1:43616187-43616206 Msa0731940:intron 30.0%
AGTCTTTATTGCAGAACATT+GGG - chr5_1:43616214-43616233 None:intergenic 30.0%
AAGTCTTTATTGCAGAACAT+TGG - chr5_1:43616215-43616234 None:intergenic 30.0%
TCACCTCTATAGAATTTGAA+CGG + chr5_1:43616312-43616331 Msa0731940:intron 30.0%
ATTCCGTTCAAATTCTATAG+AGG - chr5_1:43616318-43616337 None:intergenic 30.0%
! CTTTTTCCTTCAGTTTTTTG+AGG - chr5_1:43616364-43616383 None:intergenic 30.0%
ATTGGGACATTATCGAAATT+TGG + chr5_1:43616563-43616582 Msa0731940:intron 30.0%
! TGCTCTTTATGATAATGATG+AGG + chr5_1:43616596-43616615 Msa0731940:intron 30.0%
!! TGATTTGGTTATTCATCAGA+TGG + chr5_1:43616695-43616714 Msa0731940:CDS 30.0%
CATCATAATAGTTGTAGTGA+AGG + chr5_1:43616798-43616817 Msa0731940:intron 30.0%
TTCAGTAAACCTTAGTTACT+AGG - chr5_1:43614565-43614584 None:intergenic 30.0%
CTACAAATATTGACATGATG+AGG - chr5_1:43617003-43617022 None:intergenic 30.0%
TTCAACCAAATTATACCACA+AGG - chr5_1:43617052-43617071 None:intergenic 30.0%
TGGGAAAATACAACAAACAT+GGG - chr5_1:43617163-43617182 None:intergenic 30.0%
ATGGGAAAATACAACAAACA+TGG - chr5_1:43617164-43617183 None:intergenic 30.0%
GTATAGAGTATGTAGACTAT+GGG - chr5_1:43617182-43617201 None:intergenic 30.0%
AGTATAGAGTATGTAGACTA+TGG - chr5_1:43617183-43617202 None:intergenic 30.0%
CAATCAGAAATTATAAAGGG+TGG + chr5_1:43614917-43614936 Msa0731940:intron 30.0%
TTACAGAGTAATAAACCCTA+AGG + chr5_1:43617578-43617597 Msa0731940:intron 30.0%
TCTATCGTGAATTATCCTTA+GGG - chr5_1:43617596-43617615 None:intergenic 30.0%
TAGAGTAATACTCATTCCTA+AGG + chr5_1:43617633-43617652 Msa0731940:intron 30.0%
CTCTATAGTGAATTATCCTT+AGG - chr5_1:43617652-43617671 None:intergenic 30.0%
TCTATCGTGAATTATCCTTA+GGG - chr5_1:43617596-43617615 None:intergenic 30.0%
CAATGATTAATATTTGTCCG+AGG + chr5_1:43618075-43618094 Msa0731940:intron 30.0%
!! GAATCCTCTTTTAATTGACA+TGG + chr5_1:43618257-43618276 Msa0731940:intron 30.0%
! TTCATTTGTACTTTAGGAAG+GGG - chr5_1:43618437-43618456 None:intergenic 30.0%
! CTTCATTTGTACTTTAGGAA+GGG - chr5_1:43618438-43618457 None:intergenic 30.0%
! ACTTCATTTGTACTTTAGGA+AGG - chr5_1:43618439-43618458 None:intergenic 30.0%
ATAGAACACGAGAAGAAAAT+TGG + chr5_1:43615636-43615655 Msa0731940:CDS 30.0%
!!! AGAAGAAAATTGGCCTTTTT+GGG + chr5_1:43618470-43618489 Msa0731940:intron 30.0%
!!! ATTTTTGGAAGTACCAGTTT+TGG + chr5_1:43618639-43618658 Msa0731940:CDS 30.0%
TCATTCAAGATATGGTGTAT+TGG + chr5_1:43618750-43618769 Msa0731940:CDS 30.0%
GCACACTCAATCATAATTAT+CGG - chr5_1:43618879-43618898 None:intergenic 30.0%
AGTCTTTCTTGCAAATTAGT+TGG - chr5_1:43618961-43618980 None:intergenic 30.0%
!! AGTGATAAAGAAGTTTGTTG+AGG + chr5_1:43619224-43619243 Msa0731940:intron 30.0%
AAAATTGGAAAAGGAATGTG+CGG + chr5_1:43619296-43619315 Msa0731940:intron 30.0%
! TGCGGTTTATGATAATGATA+GGG + chr5_1:43619314-43619333 Msa0731940:intron 30.0%
!! TTGATGAAATCGTCGATTTC+CGG - chr5_1:43605868-43605887 None:intergenic 35.0%
! ATTTTGTTCGGATTGTTTGG+AGG - chr5_1:43605956-43605975 None:intergenic 35.0%
! GAGATTTTGTTCGGATTGTT+TGG - chr5_1:43605959-43605978 None:intergenic 35.0%
!! GGCGATAAAGAAATTTGTTG+AGG + chr5_1:43606161-43606180 Msa0731940:five_prime_UTR 35.0%
TGTTGAGGAGAATCAGAAAT+TGG + chr5_1:43606176-43606195 Msa0731940:five_prime_UTR 35.0%
!! TCAATACCGATTCATTCTCT+TGG - chr5_1:43606392-43606411 None:intergenic 35.0%
!! ATACCTAGTTGTGTTGCTTA+GGG + chr5_1:43606505-43606524 Msa0731940:intron 35.0%
TCGAAAATAGACACTAGTGT+CGG - chr5_1:43606681-43606700 None:intergenic 35.0%
TTGGGATATTGTTTAGTGAG+GGG + chr5_1:43606946-43606965 Msa0731940:intron 35.0%
CTACCAAACCTTTACTTGTT+TGG + chr5_1:43606989-43607008 Msa0731940:intron 35.0%
ATCCCAAACAAGTAAAGGTT+TGG - chr5_1:43606995-43607014 None:intergenic 35.0%
ATGGAAAGAAAAAGAAGGGA+GGG - chr5_1:43607116-43607135 None:intergenic 35.0%
GAAGGATGGAAAGAAAAAGA+AGG - chr5_1:43607121-43607140 None:intergenic 35.0%
ATTGTTTGGAAGTTGAGTGA+AGG - chr5_1:43607139-43607158 None:intergenic 35.0%
AACTTCCAAACAATGCCTTA+AGG + chr5_1:43607145-43607164 Msa0731940:intron 35.0%
CAAACAATGCCTTAAGGAAT+GGG + chr5_1:43607151-43607170 Msa0731940:intron 35.0%
AAACAATGCCTTAAGGAATG+GGG + chr5_1:43607152-43607171 Msa0731940:intron 35.0%
TCAATCCATATCATCCCTTA+CGG - chr5_1:43607301-43607320 None:intergenic 35.0%
GAGTAATTTAATTGCTGGGA+TGG + chr5_1:43607358-43607377 Msa0731940:intron 35.0%
CAAACCATTGTATAGCATCA+GGG - chr5_1:43607389-43607408 None:intergenic 35.0%
! CAGATAAGTTCTGACATACT+AGG + chr5_1:43607515-43607534 Msa0731940:intron 35.0%
AAATTATGTTGCCACAGGTA+AGG - chr5_1:43607567-43607586 None:intergenic 35.0%
AGGAAAAATTATGTTGCCAC+AGG - chr5_1:43607572-43607591 None:intergenic 35.0%
AAAGGACTCCATCAATTAAG+AGG - chr5_1:43607592-43607611 None:intergenic 35.0%
GCATGTATACTTAAGAATGG+TGG - chr5_1:43607872-43607891 None:intergenic 35.0%
GGCAAGTCCAAATTTAAATG+AGG - chr5_1:43607899-43607918 None:intergenic 35.0%
TGTTAGATGAAATGCATTGC+AGG - chr5_1:43607953-43607972 None:intergenic 35.0%
CAATGTTTCACGATACTAGT+GGG - chr5_1:43608006-43608025 None:intergenic 35.0%
TCAATGTTTCACGATACTAG+TGG - chr5_1:43608007-43608026 None:intergenic 35.0%
CATATAACCATGCCAAATTG+TGG + chr5_1:43608048-43608067 Msa0731940:intron 35.0%
TAGTAGTAGTAGTCCAAGTT+GGG - chr5_1:43608090-43608109 None:intergenic 35.0%
AATTTCGAAATATGGCTAGG+CGG + chr5_1:43608165-43608184 Msa0731940:intron 35.0%
! TACTAAGGTTGACTCTTCTT+CGG + chr5_1:43608246-43608265 Msa0731940:intron 35.0%
AAACTTGACAAGAGAGTAAG+AGG - chr5_1:43608433-43608452 None:intergenic 35.0%
! TTGTTTGAAGTGAAACTCCA+TGG + chr5_1:43608505-43608524 Msa0731940:intron 35.0%
! AGCTTTTCAAACTGTTTCCA+TGG - chr5_1:43608525-43608544 None:intergenic 35.0%
CTATCTTAGAGACAAACTGA+GGG - chr5_1:43608773-43608792 None:intergenic 35.0%
TCTATCTTAGAGACAAACTG+AGG - chr5_1:43608774-43608793 None:intergenic 35.0%
AAGATAGATGAATCTAGCAG+TGG + chr5_1:43608786-43608805 Msa0731940:intron 35.0%
ACTATCACAATTTACTGGGA+CGG + chr5_1:43609267-43609286 Msa0731940:intron 35.0%
!!! CGTTGTTGTGGTTTTATTCT+TGG + chr5_1:43609395-43609414 Msa0731940:intron 35.0%
!! TGACTGGAAGTCATTTTCTA+TGG + chr5_1:43609438-43609457 Msa0731940:intron 35.0%
ATGGCCATGATTAGAGAATT+TGG + chr5_1:43609457-43609476 Msa0731940:intron 35.0%
TGCTCCAAATTCTCTAATCA+TGG - chr5_1:43609464-43609483 None:intergenic 35.0%
GCACTCAACAGATAAACAAA+TGG + chr5_1:43609492-43609511 Msa0731940:intron 35.0%
!! TTGGTTCTGATTCTTGATCA+TGG - chr5_1:43609525-43609544 None:intergenic 35.0%
AAGAATCAGAACCAAAACTG+TGG + chr5_1:43609530-43609549 Msa0731940:intron 35.0%
!!! TCTGTCATTTTCCACAGTTT+TGG - chr5_1:43609544-43609563 None:intergenic 35.0%
! TTGATGGTCTTCTCTAATAC+TGG - chr5_1:43609580-43609599 None:intergenic 35.0%
AGTCGCAAGGATAATAGAAT+TGG + chr5_1:43609688-43609707 Msa0731940:intron 35.0%
GTCGCAAGGATAATAGAATT+GGG + chr5_1:43609689-43609708 Msa0731940:intron 35.0%
TCGCAAGGATAATAGAATTG+GGG + chr5_1:43609690-43609709 Msa0731940:intron 35.0%
!! GAAGAGTATTGAACGAGAAA+GGG + chr5_1:43609713-43609732 Msa0731940:intron 35.0%
AGAAAATCTGACATGACAGT+TGG + chr5_1:43609760-43609779 Msa0731940:intron 35.0%
TCTTTCAAATTCAGAGGGAA+TGG - chr5_1:43609832-43609851 None:intergenic 35.0%
TCCCTCTGAATTTGAAAGAA+AGG + chr5_1:43609833-43609852 Msa0731940:intron 35.0%
CTCCTTTCTTTCAAATTCAG+AGG - chr5_1:43609838-43609857 None:intergenic 35.0%
AAGAGAAAAGGTCATCAAGA+AGG - chr5_1:43610828-43610847 None:intergenic 35.0%
CTGGATACAATCTTTACTTC+AGG - chr5_1:43610972-43610991 None:intergenic 35.0%
ATGTACTCCTTCTATCATCA+GGG + chr5_1:43611114-43611133 Msa0731940:intron 35.0%
ACACACTTTATTCACAGAGA+AGG + chr5_1:43611295-43611314 Msa0731940:intron 35.0%
CAACTCAGAATTCTCTCTAA+AGG - chr5_1:43611575-43611594 None:intergenic 35.0%
GTAGATGATATCATCATCAC+AGG - chr5_1:43611637-43611656 None:intergenic 35.0%
AAAACCAAAACTGAGAAGAG+TGG + chr5_1:43611725-43611744 Msa0731940:intron 35.0%
! AAATCCACTCTTCTCAGTTT+TGG - chr5_1:43611732-43611751 None:intergenic 35.0%
ACAAACCAAGTTCTTGTTAG+AGG + chr5_1:43611811-43611830 Msa0731940:intron 35.0%
TGAATCCTCTAACAAGAACT+TGG - chr5_1:43611819-43611838 None:intergenic 35.0%
TTGTTAGAGGATTCAAAACC+AGG + chr5_1:43611824-43611843 Msa0731940:intron 35.0%
! GCTTACTGAAGAGGTATATA+TGG - chr5_1:43611858-43611877 None:intergenic 35.0%
GTAAACAATGCCTTTCTCAA+TGG - chr5_1:43611884-43611903 None:intergenic 35.0%
TGTTTACATCTAGCTGTTGA+AGG + chr5_1:43611897-43611916 Msa0731940:intron 35.0%
GTTTACATCTAGCTGTTGAA+GGG + chr5_1:43611898-43611917 Msa0731940:intron 35.0%
TTTACATCTAGCTGTTGAAG+GGG + chr5_1:43611899-43611918 Msa0731940:intron 35.0%
ATGCTATCCACTAAATCACA+TGG + chr5_1:43612130-43612149 Msa0731940:intron 35.0%
AAATCCACCATGTGATTTAG+TGG - chr5_1:43612140-43612159 None:intergenic 35.0%
GCAGTAAACATGTAACAATC+AGG + chr5_1:43612202-43612221 Msa0731940:intron 35.0%
GTAGCTTAAAGCAATCAACT+CGG + chr5_1:43612278-43612297 Msa0731940:intron 35.0%
!! AAAAGGACAAAGAGCATCTA+AGG + chr5_1:43612338-43612357 Msa0731940:CDS 35.0%
TATTGGAAAAGGAGAACAGA+AGG + chr5_1:43612505-43612524 Msa0731940:CDS 35.0%
GAAAGTAGTCATAGAGAATC+TGG + chr5_1:43612546-43612565 Msa0731940:CDS 35.0%
! TGTACAGAGTTACTTTGCAA+GGG - chr5_1:43612796-43612815 None:intergenic 35.0%
! ATGTACAGAGTTACTTTGCA+AGG - chr5_1:43612797-43612816 None:intergenic 35.0%
AGATCATCAAAACAGTTGTC+TGG - chr5_1:43612857-43612876 None:intergenic 35.0%
!!! TATCACCCTCTGTTTTTTCA+TGG - chr5_1:43612954-43612973 None:intergenic 35.0%
! TAACTATGTCGAGGTTTTTC+AGG - chr5_1:43612981-43613000 None:intergenic 35.0%
TAGTTATGCAGTTCAGAGTA+TGG + chr5_1:43612995-43613014 Msa0731940:intron 35.0%
TGATCATCACTTGTATAACG+GGG - chr5_1:43613712-43613731 None:intergenic 35.0%
ACTAATCTCTCGGTTGTATT+CGG - chr5_1:43613743-43613762 None:intergenic 35.0%
AACACACGATACTAATCTCT+CGG - chr5_1:43613753-43613772 None:intergenic 35.0%
TTTCAACCACTTATGGCTAT+GGG - chr5_1:43614115-43614134 None:intergenic 35.0%
TGATAGGTTTCAACCACTTA+TGG - chr5_1:43614122-43614141 None:intergenic 35.0%
! TCTTGTTTCATTTCAAGCAG+TGG + chr5_1:43614236-43614255 Msa0731940:intron 35.0%
TTTCATTTCAAGCAGTGGTT+TGG + chr5_1:43614241-43614260 Msa0731940:intron 35.0%
! ATCTGTGTTAGTTTCATGTC+TGG + chr5_1:43614468-43614487 Msa0731940:intron 35.0%
GTCTACCTATGAAACTCATA+CGG - chr5_1:43614497-43614516 None:intergenic 35.0%
GTCTACCTATGAAACTCATA+TGG - chr5_1:43614497-43614516 None:intergenic 35.0%
TTCAACCAAATCATACCACA+AGG - chr5_1:43614721-43614740 None:intergenic 35.0%
ATGGGAAAACACAACAAACA+AGG - chr5_1:43614832-43614851 None:intergenic 35.0%
!! GCTTGGTGTATATCTTCTTA+TGG + chr5_1:43615226-43615245 Msa0731940:intron 35.0%
!! GAATCCTCTTTTAATGGACA+TGG + chr5_1:43615486-43615505 Msa0731940:intron 35.0%
TACACCATGTCCATTAAAAG+AGG - chr5_1:43615493-43615512 None:intergenic 35.0%
ATTCTAACAGAACATGCGAA+TGG + chr5_1:43615720-43615739 Msa0731940:CDS 35.0%
!!! TTCCTTTTTGGAACTGTTTC+GGG - chr5_1:43615768-43615787 None:intergenic 35.0%
!! AAAATTTTGGTCACCTGTGA+AGG + chr5_1:43615788-43615807 Msa0731940:CDS 35.0%
CCATTCTTCCTAAAATACCT+AGG - chr5_1:43615872-43615891 None:intergenic 35.0%
!! CCTAGGTATTTTAGGAAGAA+TGG + chr5_1:43615869-43615888 Msa0731940:intron 35.0%
AAGATGTGGTTTATTGGACA+TGG + chr5_1:43615999-43616018 Msa0731940:CDS 35.0%
CTCGTTATAACTACTATGTC+AGG - chr5_1:43616065-43616084 None:intergenic 35.0%
! GTCGTTACATAACCCATTTT+CGG - chr5_1:43616098-43616117 None:intergenic 35.0%
AGAAACAATTTACCAAAGGG+GGG + chr5_1:43616161-43616180 Msa0731940:intron 35.0%
TTCACTCCTCAAAAAACTGA+AGG + chr5_1:43616355-43616374 Msa0731940:intron 35.0%
! CGTTGAAGAGAATCTGAAAT+TGG + chr5_1:43616521-43616540 Msa0731940:intron 35.0%
! TGAAGAGAATCTGAAATTGG+CGG + chr5_1:43616524-43616543 Msa0731940:intron 35.0%
GCAGAGTCTTAGAATCTATT+GGG + chr5_1:43616546-43616565 Msa0731940:intron 35.0%
GTTTGATGTCCTAGTAACTA+AGG + chr5_1:43616891-43616910 Msa0731940:intron 35.0%
! AACATAATAAAGTGGCCTTG+TGG + chr5_1:43617034-43617053 Msa0731940:intron 35.0%
TGCTCATTCTTCAATATGCA+TGG - chr5_1:43617210-43617229 None:intergenic 35.0%
AAGACTAATCAAAGATGCAG+TGG - chr5_1:43617518-43617537 None:intergenic 35.0%
AGCTACATTTGTAACAAGCT+TGG + chr5_1:43617544-43617563 Msa0731940:intron 35.0%
CTCTATCGTGAATTATCCTT+AGG - chr5_1:43617597-43617616 None:intergenic 35.0%
CTCTATCGTGAATTATCCTT+AGG - chr5_1:43617597-43617616 None:intergenic 35.0%
!! TTTTTCAGCTGAAGAGTTTG+TGG - chr5_1:43617813-43617832 None:intergenic 35.0%
ATATTCACCATGACAGTTAG+AGG - chr5_1:43617897-43617916 None:intergenic 35.0%
ACATAAATTCAACAGCTTGC+AGG - chr5_1:43618209-43618228 None:intergenic 35.0%
TGCACCATGTCAATTAAAAG+AGG - chr5_1:43618264-43618283 None:intergenic 35.0%
CATACATGTTTGTAGATTCC+AGG + chr5_1:43618410-43618429 Msa0731940:intron 35.0%
!!! GAGAAGAAAATTGGCCTTTT+TGG + chr5_1:43618469-43618488 Msa0731940:intron 35.0%
!!! GAAGAAAATTGGCCTTTTTG+GGG + chr5_1:43618471-43618490 Msa0731940:intron 35.0%
GGTAATGTTATTCCCCAAAA+AGG - chr5_1:43618486-43618505 None:intergenic 35.0%
!!! TTCCTTTTTTGAACCGTCTT+GGG - chr5_1:43618592-43618611 None:intergenic 35.0%
!!! TTTCCTTTTTTGAACCGTCT+TGG - chr5_1:43618593-43618612 None:intergenic 35.0%
TATCCATCAGTCTTTATCCT+AGG + chr5_1:43618681-43618700 Msa0731940:CDS 35.0%
AACGTGCTTCATTCAAGATA+TGG + chr5_1:43618742-43618761 Msa0731940:CDS 35.0%
AAGATATGGTGTATTGGACA+TGG + chr5_1:43618756-43618775 Msa0731940:CDS 35.0%
AGAATAACCGAACTCGAAAT+GGG + chr5_1:43618840-43618859 Msa0731940:CDS 35.0%
TCGAAAAGAAACGAATTACC+AGG + chr5_1:43618911-43618930 Msa0731940:CDS 35.0%
CGAAAAGAAACGAATTACCA+GGG + chr5_1:43618912-43618931 Msa0731940:CDS 35.0%
ATTCTGTTCGGATTCTTTGA+AGG - chr5_1:43619034-43619053 None:intergenic 35.0%
CGAACTCATCAAACAATCTA+AGG + chr5_1:43619102-43619121 Msa0731940:intron 35.0%
AGAATTAAAAATTGGCAGCG+AGG + chr5_1:43619247-43619266 Msa0731940:intron 35.0%
GCATTGTCGAAAATTGGAAA+AGG + chr5_1:43619287-43619306 Msa0731940:intron 35.0%
! GTGCGGTTTATGATAATGAT+AGG + chr5_1:43619313-43619332 Msa0731940:intron 35.0%
ATGAAGCTGAAGAATGAATG+AGG + chr5_1:43619360-43619379 Msa0731940:intron 35.0%
TGAAGCTGAAGAATGAATGA+GGG + chr5_1:43619361-43619380 Msa0731940:intron 35.0%
GTTGGAATGTGATTTGATTC+AGG + chr5_1:43619406-43619425 Msa0731940:intron 35.0%
! GTTTCTTTTTGACACCCGTT+GGG - chr5_1:43605688-43605707 None:intergenic 40.0%
GGTGTCAAAAAGAAACCCAA+CGG + chr5_1:43605692-43605711 Msa0731940:five_prime_UTR 40.0%
!! TGATGAAATCGTCGATTTCC+GGG - chr5_1:43605867-43605886 None:intergenic 40.0%
! CTGATCGTGGAGATTTTGTT+CGG - chr5_1:43605968-43605987 None:intergenic 40.0%
TGAGGAGAATCAGAAATTGG+CGG + chr5_1:43606179-43606198 Msa0731940:five_prime_UTR 40.0%
GCATTGTAGAAAACTGGAGA+AGG + chr5_1:43606224-43606243 Msa0731940:five_prime_UTR 40.0%
ATGTCGCCAAGAGAATGAAT+CGG + chr5_1:43606383-43606402 Msa0731940:CDS 40.0%
!! GATACCTAGTTGTGTTGCTT+AGG + chr5_1:43606504-43606523 Msa0731940:intron 40.0%
ATTCCCTAAGCAACACAACT+AGG - chr5_1:43606511-43606530 None:intergenic 40.0%
!! TAGTTGTGTTGCTTAGGGAA+TGG + chr5_1:43606510-43606529 Msa0731940:intron 40.0%
GATATTGTTTAGTGAGGGGA+AGG + chr5_1:43606950-43606969 Msa0731940:intron 40.0%
GATGGAAAGAAAAAGAAGGG+AGG - chr5_1:43607117-43607136 None:intergenic 40.0%
TTTGGAAGTTGAGTGAAGGA+TGG - chr5_1:43607135-43607154 None:intergenic 40.0%
!! CCATTCCTTAAGGCATTGTT+TGG - chr5_1:43607153-43607172 None:intergenic 40.0%
CCAAACAATGCCTTAAGGAA+TGG + chr5_1:43607150-43607169 Msa0731940:intron 40.0%
TTGTCTCTCTCTGTATGAGA+GGG + chr5_1:43607199-43607218 Msa0731940:intron 40.0%
TACACCCTGATGCTATACAA+TGG + chr5_1:43607382-43607401 Msa0731940:intron 40.0%
CCAAACCATTGTATAGCATC+AGG - chr5_1:43607390-43607409 None:intergenic 40.0%
CCTGATGCTATACAATGGTT+TGG + chr5_1:43607387-43607406 Msa0731940:intron 40.0%
ACTAGGATTCAAACCAGACA+TGG + chr5_1:43607532-43607551 Msa0731940:intron 40.0%
AAGGACTTATGAACCATGTC+TGG - chr5_1:43607548-43607567 None:intergenic 40.0%
! CAAATACTCAATGATGGAGC+CGG - chr5_1:43607651-43607670 None:intergenic 40.0%
AGATGCCTCATATGACTTTC+AGG - chr5_1:43607705-43607724 None:intergenic 40.0%
GAGAAATCCAACAATAGCTC+AGG - chr5_1:43607729-43607748 None:intergenic 40.0%
CTTTGACAGTACATTCACTC+AGG + chr5_1:43607820-43607839 Msa0731940:intron 40.0%
GACTTAGCAGTACCACAATT+TGG - chr5_1:43608063-43608082 None:intergenic 40.0%
AATTGTGGTACTGCTAAGTC+AGG + chr5_1:43608063-43608082 Msa0731940:intron 40.0%
GTAGTAGTAGTAGTCCAAGT+TGG - chr5_1:43608091-43608110 None:intergenic 40.0%
!! GAGTTTGCTTGACTCTCTTT+TGG + chr5_1:43608288-43608307 Msa0731940:CDS 40.0%
GTAAAAAGCTGCTGTCAATG+TGG + chr5_1:43608380-43608399 Msa0731940:CDS 40.0%
ATGAATCTAGCAGTGGTGTT+AGG + chr5_1:43608793-43608812 Msa0731940:intron 40.0%
! TATTGATTAGGAGCGGTTAC+AGG + chr5_1:43608944-43608963 Msa0731940:intron 40.0%
TTGAATTTCCCCTACTGTTG+TGG - chr5_1:43610526-43610545 None:intergenic 40.0%
AGAGAAATGTCTCTTCTCTG+AGG + chr5_1:43609067-43609086 Msa0731940:intron 40.0%
!!! TTTTGCTCTGGGATTACAGA+GGG + chr5_1:43609093-43609112 Msa0731940:intron 40.0%
GAGAAGGAAACCAGTGTTAT+CGG + chr5_1:43609213-43609232 Msa0731940:intron 40.0%
TATCGGAGATGGATGGAATA+TGG + chr5_1:43609230-43609249 Msa0731940:intron 40.0%
ACTCATGTGATAAGTTGCAG+TGG + chr5_1:43609344-43609363 Msa0731940:intron 40.0%
CTCATGTGATAAGTTGCAGT+GGG + chr5_1:43609345-43609364 Msa0731940:intron 40.0%
! TAGAGAATTTGGAGCACAGA+TGG + chr5_1:43609468-43609487 Msa0731940:intron 40.0%
TTAGAGAAGACCATCAACGA+TGG + chr5_1:43609583-43609602 Msa0731940:intron 40.0%
!!! CCTTTTTTCTCCATCGTTGA+TGG - chr5_1:43609596-43609615 None:intergenic 40.0%
CCATCAACGATGGAGAAAAA+AGG + chr5_1:43609593-43609612 Msa0731940:intron 40.0%
CAGTGAAATTTCACCTTCGT+CGG + chr5_1:43609621-43609640 Msa0731940:intron 40.0%
AATTTCACCTTCGTCGGAAA+AGG + chr5_1:43609627-43609646 Msa0731940:intron 40.0%
AAAGGCTGTTGATGCAGAAA+TGG + chr5_1:43609645-43609664 Msa0731940:intron 40.0%
TGAAACAAAGAAGAGTCGCA+AGG + chr5_1:43609675-43609694 Msa0731940:intron 40.0%
CGCAAGGATAATAGAATTGG+GGG + chr5_1:43609691-43609710 Msa0731940:intron 40.0%
!! GGAAGAGTATTGAACGAGAA+AGG + chr5_1:43609712-43609731 Msa0731940:intron 40.0%
AGTTGGAAAAAGAGACCAAG+AGG + chr5_1:43609777-43609796 Msa0731940:intron 40.0%
GTTGGAAAAAGAGACCAAGA+GGG + chr5_1:43609778-43609797 Msa0731940:intron 40.0%
ATGCAACTTTGTATGTGGCT+TGG + chr5_1:43609866-43609885 Msa0731940:intron 40.0%
CTTGTCAAGGTTCCAACAAT+GGG + chr5_1:43609903-43609922 Msa0731940:intron 40.0%
! TATTGATTAGGAGCGGTTAC+AGG + chr5_1:43608944-43608963 Msa0731940:intron 40.0%
TTGAATTTCCCCTACTGTTG+TGG - chr5_1:43610526-43610545 None:intergenic 40.0%
AGAGAAATGTCTCTTCTCTG+AGG + chr5_1:43609067-43609086 Msa0731940:intron 40.0%
!!! TTTTGCTCTGGGATTACAGA+GGG + chr5_1:43609093-43609112 Msa0731940:intron 40.0%
!!! TTTTGCTCTGGGATTACAGA+GGG - chr5_1:43609093-43609112 None:intergenic 40.0%
AGAGAAATGTCTCTTCTCTG+AGG - chr5_1:43609067-43609086 None:intergenic 40.0%
TTGAATTTCCCCTACTGTTG+TGG + chr5_1:43610526-43610545 Msa0731940:intron 40.0%
! TATTGATTAGGAGCGGTTAC+AGG - chr5_1:43608944-43608963 None:intergenic 40.0%
! TCTGTCCACTTGTTAGGTAT+CGG - chr5_1:43610747-43610766 None:intergenic 40.0%
TAAACCTCTGTCCACTTGTT+AGG - chr5_1:43610753-43610772 None:intergenic 40.0%
AAGCTTCTGCTGAAATCATC+TGG - chr5_1:43610991-43611010 None:intergenic 40.0%
!! TCCTAATTTGGTGTCTTGGT+GGG - chr5_1:43611074-43611093 None:intergenic 40.0%
! GATGATAGAAGGAGTACATC+TGG - chr5_1:43611113-43611132 None:intergenic 40.0%
GATGTACTCCTTCTATCATC+AGG + chr5_1:43611113-43611132 Msa0731940:intron 40.0%
TTCACAGAGAAGGAGATTTC+AGG + chr5_1:43611305-43611324 Msa0731940:intron 40.0%
TGAGGGATCAGAAACACTAT+TGG + chr5_1:43611376-43611395 Msa0731940:intron 40.0%
GATAAAAGTAGGGAACCTGA+TGG + chr5_1:43611503-43611522 Msa0731940:intron 40.0%
! GGGGAACTGGATTATTTTCT+TGG - chr5_1:43611548-43611567 None:intergenic 40.0%
!! TGAGTTGATGAACTAGTTGC+TGG + chr5_1:43611593-43611612 Msa0731940:intron 40.0%
!! CTTGGTTTGTAAGCTACACA+AGG - chr5_1:43611801-43611820 None:intergenic 40.0%
TTAGAGGATTCAAAACCAGG+AGG + chr5_1:43611827-43611846 Msa0731940:intron 40.0%
AGTAAGCAAGCCATTGAGAA+AGG + chr5_1:43611871-43611890 Msa0731940:intron 40.0%
AAAACTGTTCTCACTGTGAC+AGG + chr5_1:43611947-43611966 Msa0731940:intron 40.0%
ACTGTGACAGGTTTAACAAC+AGG + chr5_1:43611959-43611978 Msa0731940:intron 40.0%
GGATAGCATAATTCGGAAAG+AGG - chr5_1:43612119-43612138 None:intergenic 40.0%
CTATCCACTAAATCACATGG+TGG + chr5_1:43612133-43612152 Msa0731940:intron 40.0%
!! TTGGCTTGGTGCAAACTATA+GGG + chr5_1:43612456-43612475 Msa0731940:intron 40.0%
AGTAGTCATAGAGAATCTGG+TGG + chr5_1:43612549-43612568 Msa0731940:CDS 40.0%
GTAGTCATAGAGAATCTGGT+GGG + chr5_1:43612550-43612569 Msa0731940:CDS 40.0%
TACCAATAGTACATCTGCCA+AGG + chr5_1:43612578-43612597 Msa0731940:CDS 40.0%
TACCTTGGCAGATGTACTAT+TGG - chr5_1:43612583-43612602 None:intergenic 40.0%
CGAGCTACTTGTCTTTGAAT+TGG - chr5_1:43612713-43612732 None:intergenic 40.0%
TTCAAAGACAAGTAGCTCGA+TGG + chr5_1:43612714-43612733 Msa0731940:CDS 40.0%
GATTCAGTATCACCTAGACA+AGG + chr5_1:43612763-43612782 Msa0731940:CDS 40.0%
AGGAAGATGAATCTAGACAG+TGG - chr5_1:43612830-43612849 None:intergenic 40.0%
CAAAACAGTTGTCTGGTTAG+AGG - chr5_1:43612850-43612869 None:intergenic 40.0%
TGAACTGCATAACTATGTCG+AGG - chr5_1:43612990-43613009 None:intergenic 40.0%
TTTCAACCAAATGACCTCTC+AGG - chr5_1:43613877-43613896 None:intergenic 40.0%
! GGTGAATCAGAACTGTTTTC+TGG + chr5_1:43614027-43614046 Msa0731940:intron 40.0%
GTTTCAACCACTTATGGCTA+TGG - chr5_1:43614116-43614135 None:intergenic 40.0%
!! TCTTTGGTTGTTTCTGCTTG+TGG + chr5_1:43614184-43614203 Msa0731940:intron 40.0%
!! CTTTGGTTGTTTCTGCTTGT+GGG + chr5_1:43614185-43614204 Msa0731940:intron 40.0%
AACAAGAAACCAATCTCAGC+AGG - chr5_1:43614223-43614242 None:intergenic 40.0%
!! ATTTCAAGCAGTGGTTTGGT+GGG + chr5_1:43614245-43614264 Msa0731940:intron 40.0%
AATTACCTACACACCCGATT+CGG - chr5_1:43614277-43614296 None:intergenic 40.0%
GTAGATGACACTCACACATA+TGG + chr5_1:43614411-43614430 Msa0731940:intron 40.0%
AGACATGTTAGTTGCATGTC+TGG + chr5_1:43614513-43614532 Msa0731940:intron 40.0%
GGTGTCCATATGAGTTTCAT+AGG + chr5_1:43614534-43614553 Msa0731940:intron 40.0%
TAGGTAGACGGTAGTAACTA+AGG + chr5_1:43614553-43614572 Msa0731940:intron 40.0%
! GACATATTAATGTGGCCTTG+TGG + chr5_1:43614703-43614722 Msa0731940:intron 40.0%
! GTATAGAGCATGTCGACTAT+GGG - chr5_1:43614850-43614869 None:intergenic 40.0%
! AGTATAGAGCATGTCGACTA+TGG - chr5_1:43614851-43614870 None:intergenic 40.0%
TATAAGGTAGAGTTCGAGGA+GGG + chr5_1:43614958-43614977 Msa0731940:intron 40.0%
AAGGCATACACCAAGCTATT+GGG - chr5_1:43615293-43615312 None:intergenic 40.0%
ATGTTCAGCTGAAGAGATTG+CGG - chr5_1:43615330-43615349 None:intergenic 40.0%
GCATCATGTTTGTAGATTCC+AGG + chr5_1:43615591-43615610 Msa0731940:intron 40.0%
! GTAGTGTTGTTATTCCCCAA+AGG - chr5_1:43615662-43615681 None:intergenic 40.0%
ATCCCGAAACAGTTCCAAAA+AGG + chr5_1:43615763-43615782 Msa0731940:CDS 40.0%
CTAAAATGTACAGCCTTCAC+AGG - chr5_1:43615804-43615823 None:intergenic 40.0%
! CTGTGAAGGCTGTACATTTT+AGG + chr5_1:43615802-43615821 Msa0731940:CDS 40.0%
ATTCTCGCCGAAACTACATA+AGG - chr5_1:43615943-43615962 None:intergenic 40.0%
TTATGTAGTTTCGGCGAGAA+TGG + chr5_1:43615942-43615961 Msa0731940:intron 40.0%
TTTCCACTTCCTCTTCAGAA+GGG - chr5_1:43615968-43615987 None:intergenic 40.0%
AATGAGAGTCTTGCTGCAAA+TGG + chr5_1:43616029-43616048 Msa0731940:CDS 40.0%
AGAATAACCGGACCGAAAAT+GGG + chr5_1:43616083-43616102 Msa0731940:CDS 40.0%
! TACATAACCCATTTTCGGTC+CGG - chr5_1:43616093-43616112 None:intergenic 40.0%
!! AATGGGTTATGTAACGACAC+TGG + chr5_1:43616100-43616119 Msa0731940:CDS 40.0%
!! CAAAGAAGTACAAGAGCACT+CGG - chr5_1:43616137-43616156 None:intergenic 40.0%
TTGGGACCAAATACAACACA+TGG - chr5_1:43616196-43616215 None:intergenic 40.0%
GACTAGTGCAGCTCATTATT+TGG + chr5_1:43616288-43616307 Msa0731940:intron 40.0%
GGCAGAGTCTTAGAATCTAT+TGG + chr5_1:43616545-43616564 Msa0731940:intron 40.0%
TGAAGAGTTGGAACGTGATT+TGG + chr5_1:43616680-43616699 Msa0731940:CDS 40.0%
! TACCATAGGCTTTGCTCTTT+TGG - chr5_1:43616757-43616776 None:intergenic 40.0%
CTTGTGCTAGTGGTTATTAC+TGG + chr5_1:43616856-43616875 Msa0731940:intron 40.0%
!! AGTGGCCTTGTGGTATAATT+TGG + chr5_1:43617044-43617063 Msa0731940:intron 40.0%
CTCCACAAACTCTACCTTAT+GGG - chr5_1:43617295-43617314 None:intergenic 40.0%
CATAAGGTAGAGTTTGTGGA+GGG + chr5_1:43617294-43617313 Msa0731940:intron 40.0%
CTTCATATCGTTACACCCTA+AGG + chr5_1:43617750-43617769 Msa0731940:intron 40.0%
TATTTGTCAAGGAACCTAGC+TGG + chr5_1:43618015-43618034 Msa0731940:intron 40.0%
TGAGTAAAACTTGAGGCTCA+AGG - chr5_1:43618044-43618063 None:intergenic 40.0%
AGTCGGTTGAGTAAAACTTG+AGG - chr5_1:43618051-43618070 None:intergenic 40.0%
AGATCCTTTAAGCAAAGCCT+CGG - chr5_1:43618095-43618114 None:intergenic 40.0%
TTTCTAACAGAACACGCCAA+TGG + chr5_1:43618544-43618563 Msa0731940:intron 40.0%
ATTGAACGAGAATCCCAAGA+CGG + chr5_1:43618576-43618595 Msa0731940:CDS 40.0%
ATCCCAAGACGGTTCAAAAA+AGG + chr5_1:43618587-43618606 Msa0731940:CDS 40.0%
CTGGTACTTCCAAAAATACC+CGG - chr5_1:43618636-43618655 None:intergenic 40.0%
!!! GAAGTACCAGTTTTGGAAGA+TGG + chr5_1:43618646-43618665 Msa0731940:CDS 40.0%
AAGAAGCCATCTTCCAAAAC+TGG - chr5_1:43618655-43618674 None:intergenic 40.0%
CTACCTAGGATAAAGACTGA+TGG - chr5_1:43618687-43618706 None:intergenic 40.0%
AATGAGAGTCTTGCTGCAAA+TGG + chr5_1:43616029-43616048 Msa0731940:CDS 40.0%
GAGAATAACCGAACTCGAAA+TGG + chr5_1:43618839-43618858 Msa0731940:CDS 40.0%
!! TACATCACCCATTTCGAGTT+CGG - chr5_1:43618850-43618869 None:intergenic 40.0%
AAAGAAACGAATTACCAGGG+AGG + chr5_1:43618915-43618934 Msa0731940:CDS 40.0%
!! ATTGGGGCATTGTCGAAAAT+TGG + chr5_1:43619281-43619300 Msa0731940:intron 40.0%
GTGTTTATGAGCTGAAGAGT+TGG + chr5_1:43619388-43619407 Msa0731940:intron 40.0%
GGAATGTGATTTGATTCAGG+TGG + chr5_1:43619409-43619428 Msa0731940:intron 40.0%
! GGTTTCTTTTTGACACCCGT+TGG - chr5_1:43605689-43605708 None:intergenic 45.0%
TTGAAATCTCACGAGCCGTT+GGG - chr5_1:43605710-43605729 None:intergenic 45.0%
ATTGAAATCTCACGAGCCGT+TGG - chr5_1:43605711-43605730 None:intergenic 45.0%
ATTGAAGAGATGCGATGCGA+TGG - chr5_1:43605755-43605774 None:intergenic 45.0%
!! ATGAAATCGTCGATTTCCGG+GGG - chr5_1:43605865-43605884 None:intergenic 45.0%
!! GATGAAATCGTCGATTTCCG+GGG - chr5_1:43605866-43605885 None:intergenic 45.0%
CAATCCATCGACCACTCTTT+AGG + chr5_1:43605889-43605908 Msa0731940:five_prime_UTR 45.0%
AAGACCTAAAGAGTGGTCGA+TGG - chr5_1:43605896-43605915 None:intergenic 45.0%
AGATGGGAAGACCTAAAGAG+TGG - chr5_1:43605903-43605922 None:intergenic 45.0%
AAGCTTGATGTCGAGGGTTT+GGG - chr5_1:43605929-43605948 None:intergenic 45.0%
CCTTGGATTGTTCGATGAGT+TGG - chr5_1:43606025-43606044 None:intergenic 45.0%
CCAACTCATCGAACAATCCA+AGG + chr5_1:43606022-43606041 Msa0731940:five_prime_UTR 45.0%
GGAGGGTTTGAAAGAAACCT+TGG - chr5_1:43606042-43606061 None:intergenic 45.0%
!! GTTGGGGCATTGTAGAAAAC+TGG + chr5_1:43606218-43606237 Msa0731940:five_prime_UTR 45.0%
ATGAAGCTGAAGAACAAGCG+AGG + chr5_1:43606295-43606314 Msa0731940:five_prime_UTR 45.0%
TGAAGCTGAAGAACAAGCGA+GGG + chr5_1:43606296-43606315 Msa0731940:five_prime_UTR 45.0%
TGAGGAGTTGGAACGTGATT+TGG + chr5_1:43606335-43606354 Msa0731940:five_prime_UTR 45.0%
!! TATTGGTGTTGACGTGTCTG+TGG + chr5_1:43606748-43606767 Msa0731940:intron 45.0%
TGTTTAGTGAGGGGAAGGAA+AGG + chr5_1:43606955-43606974 Msa0731940:intron 45.0%
GTTTAGTGAGGGGAAGGAAA+GGG + chr5_1:43606956-43606975 Msa0731940:intron 45.0%
TTAAGGAATGGGGTCGTATG+CGG + chr5_1:43607162-43607181 Msa0731940:intron 45.0%
ACAGAGAGAGACAAGAGATC+AGG - chr5_1:43607193-43607212 None:intergenic 45.0%
CTTGTCTCTCTCTGTATGAG+AGG + chr5_1:43607198-43607217 Msa0731940:intron 45.0%
AGAGAGAGAGAATGCCGTAA+GGG + chr5_1:43607284-43607303 Msa0731940:intron 45.0%
GAATGCCGTAAGGGATGATA+TGG + chr5_1:43607293-43607312 Msa0731940:intron 45.0%
GGTTCATAAGTCCTTACCTG+TGG + chr5_1:43607553-43607572 Msa0731940:intron 45.0%
CGGCTCCATCATTGAGTATT+TGG + chr5_1:43607649-43607668 Msa0731940:intron 45.0%
GCATCTTCCTGAGCTATTGT+TGG + chr5_1:43607719-43607738 Msa0731940:intron 45.0%
AGCAGTACCACAATTTGGCA+TGG - chr5_1:43608058-43608077 None:intergenic 45.0%
AACATTCCCCCTTCAAACTG+AGG + chr5_1:43608737-43608756 Msa0731940:intron 45.0%
ACATTCCCCCTTCAAACTGA+GGG + chr5_1:43608738-43608757 Msa0731940:intron 45.0%
TGTGACACCCTCAGTTTGAA+GGG - chr5_1:43608748-43608767 None:intergenic 45.0%
TTGTGACACCCTCAGTTTGA+AGG - chr5_1:43608749-43608768 None:intergenic 45.0%
! CTAGCAGTGGTGTTAGGTAT+CGG + chr5_1:43608799-43608818 Msa0731940:intron 45.0%
! TAGCAGTGGTGTTAGGTATC+GGG + chr5_1:43608800-43608819 Msa0731940:intron 45.0%
!! AGGTATCGGGTGGTATTGAT+AGG + chr5_1:43608813-43608832 Msa0731940:intron 45.0%
!! GGTATCGGGTGGTATTGATA+GGG + chr5_1:43608814-43608833 Msa0731940:intron 45.0%
CTCTCTGCCCAAAACCAATA+AGG - chr5_1:43610486-43610505 None:intergenic 45.0%
!!! CTTTTGCTCTGGGATTACAG+AGG + chr5_1:43609092-43609111 Msa0731940:intron 45.0%
TATCAATTGGTCCGACCTAC+CGG + chr5_1:43609186-43609205 Msa0731940:intron 45.0%
! ACTGGTTTCCTTCTCGTATC+CGG - chr5_1:43609208-43609227 None:intergenic 45.0%
GAAACCAGTGTTATCGGAGA+TGG + chr5_1:43609219-43609238 Msa0731940:intron 45.0%
!! AGGATGAAGAAGCGTTGTTG+TGG + chr5_1:43609383-43609402 Msa0731940:intron 45.0%
ATGACTTCCAGTCAGCATCT+GGG - chr5_1:43609432-43609451 None:intergenic 45.0%
AATGACTTCCAGTCAGCATC+TGG - chr5_1:43609433-43609452 None:intergenic 45.0%
GAAAAAGAGACCAAGAGGGT+GGG + chr5_1:43609782-43609801 Msa0731940:intron 45.0%
AAAAAGAGACCAAGAGGGTG+GGG + chr5_1:43609783-43609802 Msa0731940:intron 45.0%
AAATTCAGAGGGAATGGCTC+CGG - chr5_1:43609826-43609845 None:intergenic 45.0%
! CAACTTTGTATGTGGCTTGG+TGG + chr5_1:43609869-43609888 Msa0731940:intron 45.0%
!! TATGTGGCTTGGTGGTTTGA+AGG + chr5_1:43609877-43609896 Msa0731940:intron 45.0%
!! ATGTGGCTTGGTGGTTTGAA+GGG + chr5_1:43609878-43609897 Msa0731940:intron 45.0%
GCTTGTCAAGGTTCCAACAA+TGG + chr5_1:43609902-43609921 Msa0731940:intron 45.0%
ATAACTCAGCCTTGAGGACA+AGG + chr5_1:43609954-43609973 Msa0731940:intron 45.0%
! GAAAAACAGCCTTGTCCTCA+AGG - chr5_1:43609966-43609985 None:intergenic 45.0%
CGGTCGGTAATGTTAGGTAT+CGG + chr5_1:43609989-43610008 Msa0731940:intron 45.0%
GGTCGGTAATGTTAGGTATC+GGG + chr5_1:43609990-43610009 Msa0731940:intron 45.0%
!! AGGTATCGGGTGGTATTGAT+AGG + chr5_1:43608813-43608832 Msa0731940:intron 45.0%
!! GGTATCGGGTGGTATTGATA+GGG + chr5_1:43608814-43608833 Msa0731940:intron 45.0%
CTCTCTGCCCAAAACCAATA+AGG - chr5_1:43610486-43610505 None:intergenic 45.0%
!!! CTTTTGCTCTGGGATTACAG+AGG + chr5_1:43609092-43609111 Msa0731940:intron 45.0%
!!! CTTTTGCTCTGGGATTACAG+AGG - chr5_1:43609092-43609111 None:intergenic 45.0%
CTCTCTGCCCAAAACCAATA+AGG + chr5_1:43610486-43610505 Msa0731940:intron 45.0%
!! GGTATCGGGTGGTATTGATA+GGG - chr5_1:43608814-43608833 None:intergenic 45.0%
!! AGGTATCGGGTGGTATTGAT+AGG - chr5_1:43608813-43608832 None:intergenic 45.0%
! CTGTCCACTTGTTAGGTATC+GGG - chr5_1:43610746-43610765 None:intergenic 45.0%
GATACCTAACAAGTGGACAG+AGG + chr5_1:43610746-43610765 Msa0731940:intron 45.0%
TGTACCTGCTCAAGATCAGT+GGG - chr5_1:43610789-43610808 None:intergenic 45.0%
ATGTACCTGCTCAAGATCAG+TGG - chr5_1:43610790-43610809 None:intergenic 45.0%
ACTGATCTTGAGCAGGTACA+TGG + chr5_1:43610789-43610808 Msa0731940:intron 45.0%
CTGATCTTGAGCAGGTACAT+GGG + chr5_1:43610790-43610809 Msa0731940:intron 45.0%
GGCAAGGAAACAAACACTAG+TGG - chr5_1:43611053-43611072 None:intergenic 45.0%
!! GTCCTAATTTGGTGTCTTGG+TGG - chr5_1:43611075-43611094 None:intergenic 45.0%
!! TGGGTCCTAATTTGGTGTCT+TGG - chr5_1:43611078-43611097 None:intergenic 45.0%
CTTCAGACCCTGATGATAGA+AGG - chr5_1:43611124-43611143 None:intergenic 45.0%
!! CGGGTTTTGTGATGCTGATT+GGG - chr5_1:43611147-43611166 None:intergenic 45.0%
CCAATCAGCATCACAAAACC+CGG + chr5_1:43611145-43611164 Msa0731940:intron 45.0%
TGAGAAGCAAACCATGATGC+AGG + chr5_1:43611201-43611220 Msa0731940:intron 45.0%
GAGAAGCAAACCATGATGCA+GGG + chr5_1:43611202-43611221 Msa0731940:intron 45.0%
GGGTCCCTTGTAAATATCTG+AGG + chr5_1:43611222-43611241 Msa0731940:intron 45.0%
TCAGTTTCTATCTGCACCTC+AGG - chr5_1:43611276-43611295 None:intergenic 45.0%
! CTCTAAAGGATTTGGGGAAC+TGG - chr5_1:43611561-43611580 None:intergenic 45.0%
CAATGAAGGATCACATCTGC+TGG + chr5_1:43611698-43611717 Msa0731940:intron 45.0%
AGTCTGTCAAACCAAGCTCT+AGG + chr5_1:43611753-43611772 Msa0731940:intron 45.0%
GTCTGTCAAACCAAGCTCTA+GGG + chr5_1:43611754-43611773 Msa0731940:intron 45.0%
! TCTGTCAAACCAAGCTCTAG+GGG + chr5_1:43611755-43611774 Msa0731940:intron 45.0%
! AGGGGCTTGTTTCAATCCAT+AGG + chr5_1:43611773-43611792 Msa0731940:intron 45.0%
! GGGGCTTGTTTCAATCCATA+GGG + chr5_1:43611774-43611793 Msa0731940:intron 45.0%
! GGGCTTGTTTCAATCCATAG+GGG + chr5_1:43611775-43611794 Msa0731940:intron 45.0%
!! CAATGGCTTGCTTACTGAAG+AGG - chr5_1:43611867-43611886 None:intergenic 45.0%
CTCTAGCTATCACTCAACAC+TGG - chr5_1:43611925-43611944 None:intergenic 45.0%
!! ATGGAATGACTGACTTGGCT+TGG + chr5_1:43612442-43612461 Msa0731940:intron 45.0%
!! CTTGGCTTGGTGCAAACTAT+AGG + chr5_1:43612455-43612474 Msa0731940:intron 45.0%
TCTGCCAAGGTAAGAATCGT+AGG + chr5_1:43612591-43612610 Msa0731940:intron 45.0%
CTGCCAAGGTAAGAATCGTA+GGG + chr5_1:43612592-43612611 Msa0731940:intron 45.0%
TGCCAAGGTAAGAATCGTAG+GGG + chr5_1:43612593-43612612 Msa0731940:intron 45.0%
AAGGGTGACAATCCTTGTCT+AGG - chr5_1:43612778-43612797 None:intergenic 45.0%
! CTATGGGCTCCTTTTTCCTA+AGG - chr5_1:43613191-43613210 None:intergenic 45.0%
CAAATGACCTCTCAGGAAAC+TGG - chr5_1:43613870-43613889 None:intergenic 45.0%
CAGTTTCCTGAGAGGTCATT+TGG + chr5_1:43613868-43613887 Msa0731940:intron 45.0%
GTCTCGAACTGAGTTTCACA+AGG - chr5_1:43613914-43613933 None:intergenic 45.0%
GTGAAACTCAGTTCGAGACT+CGG + chr5_1:43613915-43613934 Msa0731940:intron 45.0%
ATTGGACCCATAGCCATAAG+TGG + chr5_1:43614106-43614125 Msa0731940:intron 45.0%
! CATTTCAAGCAGTGGTTTGG+TGG + chr5_1:43614244-43614263 Msa0731940:intron 45.0%
GGTGTCCGTATGAGTTTCAT+AGG + chr5_1:43614489-43614508 Msa0731940:intron 45.0%
!! TGTGGCCTTGTGGTATGATT+TGG + chr5_1:43614713-43614732 Msa0731940:intron 45.0%
TTATAGGAGCCAAGTGCACT+GGG - chr5_1:43614943-43614962 None:intergenic 45.0%
CTCCTATAAGGTAGAGTTCG+AGG + chr5_1:43614954-43614973 Msa0731940:intron 45.0%
CTCCTCGAACTCTACCTTAT+AGG - chr5_1:43614959-43614978 None:intergenic 45.0%
CTATAAGGTAGAGTTCGAGG+AGG + chr5_1:43614957-43614976 Msa0731940:intron 45.0%
! GAAGGCATACACCAAGCTAT+TGG - chr5_1:43615294-43615313 None:intergenic 45.0%
TGCGGCATAGTGTCATATGA+AGG - chr5_1:43615312-43615331 None:intergenic 45.0%
TCAGCAGATGCAACTGTTGT+TGG + chr5_1:43615684-43615703 Msa0731940:CDS 45.0%
TTTAGGAAGAATGGCCCTTC+TGG + chr5_1:43615878-43615897 Msa0731940:intron 45.0%
AAGCATCCTTCACACCAGAA+GGG - chr5_1:43615895-43615914 None:intergenic 45.0%
CTTTCCACTTCCTCTTCAGA+AGG - chr5_1:43615969-43615988 None:intergenic 45.0%
GAGAATAACCGGACCGAAAA+TGG + chr5_1:43616082-43616101 Msa0731940:CDS 45.0%
TTGTTTGCGAGCTGAAGAGT+TGG + chr5_1:43616668-43616687 Msa0731940:CDS 45.0%
GACCAAAAGAGCAAAGCCTA+TGG + chr5_1:43616752-43616771 Msa0731940:CDS 45.0%
ATACATGACGCTTGTGCTAG+TGG + chr5_1:43616846-43616865 Msa0731940:intron 45.0%
CTCCCATAAGGTAGAGTTTG+TGG + chr5_1:43617290-43617309 Msa0731940:intron 45.0%
CCTCCACAAACTCTACCTTA+TGG - chr5_1:43617296-43617315 None:intergenic 45.0%
CCATAAGGTAGAGTTTGTGG+AGG + chr5_1:43617293-43617312 Msa0731940:intron 45.0%
GAAGAGTTTGTGGCATAGTC+AGG - chr5_1:43617803-43617822 None:intergenic 45.0%
GAATCCTCCTCTAACTGTCA+TGG + chr5_1:43617887-43617906 Msa0731940:intron 45.0%
TTCACCATGACAGTTAGAGG+AGG - chr5_1:43617894-43617913 None:intergenic 45.0%
TTGTCCGAGGCTTTGCTTAA+AGG + chr5_1:43618088-43618107 Msa0731940:intron 45.0%
!!! TTTTTTGGTCACCTGTGAGC+CGG + chr5_1:43618614-43618633 Msa0731940:CDS 45.0%
! CATTTTCGCTGCAACTACCT+AGG - chr5_1:43618701-43618720 None:intergenic 45.0%
CTAGGTAGTTGCAGCGAAAA+TGG + chr5_1:43618699-43618718 Msa0731940:CDS 45.0%
! CGAAAATGGTCCTTCTGAAG+AGG + chr5_1:43618713-43618732 Msa0731940:CDS 45.0%
TGGAAACTCAAAACCTGACG+TGG + chr5_1:43618806-43618825 Msa0731940:CDS 45.0%
CTCGTTATAACTTCCACGTC+AGG - chr5_1:43618822-43618841 None:intergenic 45.0%
GAGGAGTTTATTCTCCAGGT+TGG + chr5_1:43618934-43618953 Msa0731940:intron 45.0%
GCAAATTAGTTGGACCAACC+TGG - chr5_1:43618951-43618970 None:intergenic 45.0%
GACTGCTGCAGCTCATTATT+TGG + chr5_1:43619004-43619023 Msa0731940:intron 45.0%
AGCGAGGTGTGAGAATGTAT+TGG + chr5_1:43619263-43619282 Msa0731940:intron 45.0%
GCGAGGTGTGAGAATGTATT+GGG + chr5_1:43619264-43619283 Msa0731940:intron 45.0%
CGAGGTGTGAGAATGTATTG+GGG + chr5_1:43619265-43619284 Msa0731940:intron 45.0%
AGCTGAAGAATGAATGAGGG+AGG + chr5_1:43619364-43619383 Msa0731940:intron 45.0%
!! ATAAATAATAGTAATAATTA+TGG - chr5_1:43606063-43606082 None:intergenic 5.0%
!! ATATTATAGAAAATTATTAA+AGG + chr5_1:43613407-43613426 Msa0731940:intron 5.0%
!!! TAATAGTTAATAATTAATTT+TGG - chr5_1:43613515-43613534 None:intergenic 5.0%
!!! TAATATTAAAAATTGTATTT+TGG - chr5_1:43613788-43613807 None:intergenic 5.0%
!! GTAAAAATAAAAATAAAAAA+TGG + chr5_1:43614160-43614179 Msa0731940:intron 5.0%
!!! TTTTATTTTAAATTTCTTTT+TGG + chr5_1:43616449-43616468 Msa0731940:intron 5.0%
!! CTTAATTAAAATTTAAAAAT+TGG - chr5_1:43618390-43618409 None:intergenic 5.0%
!!! TTTATTTTAAATTTTCTTTT+TGG + chr5_1:43619167-43619186 Msa0731940:intron 5.0%
GTGGAAGTGAGAGCTGTAGA+GGG - chr5_1:43605786-43605805 None:intergenic 50.0%
GAAGCTTGATGTCGAGGGTT+TGG - chr5_1:43605930-43605949 None:intergenic 50.0%
GGAGAATCAGAAATTGGCGG+CGG + chr5_1:43606182-43606201 Msa0731940:five_prime_UTR 50.0%
GCGGAGTGTGAGAATCTGTT+GGG + chr5_1:43606201-43606220 Msa0731940:five_prime_UTR 50.0%
CGGAGTGTGAGAATCTGTTG+GGG + chr5_1:43606202-43606221 Msa0731940:five_prime_UTR 50.0%
GCATACGACCCCATTCCTTA+AGG - chr5_1:43607163-43607182 None:intergenic 50.0%
TCTCTCTCTGTATGAGAGGG+AGG + chr5_1:43607202-43607221 Msa0731940:intron 50.0%
CTCTCTCTGTATGAGAGGGA+GGG + chr5_1:43607203-43607222 Msa0731940:intron 50.0%
GAGAGAGAGAGAATGCCGTA+AGG + chr5_1:43607283-43607302 Msa0731940:intron 50.0%
TTCCCCAAGACTTCGTAGTC+CGG + chr5_1:43607629-43607648 Msa0731940:intron 50.0%
TGCTAAGTCAGGACCCAACT+TGG + chr5_1:43608074-43608093 Msa0731940:intron 50.0%
TCTTCTTCGGCAAGCACACA+TGG + chr5_1:43608259-43608278 Msa0731940:CDS 50.0%
CTTCTTCGGCAAGCACACAT+GGG + chr5_1:43608260-43608279 Msa0731940:CDS 50.0%
TTCTTCGGCAAGCACACATG+GGG + chr5_1:43608261-43608280 Msa0731940:CDS 50.0%
AAGCTGCTGTCAATGTGGAG+CGG + chr5_1:43608385-43608404 Msa0731940:CDS 50.0%
TGACACCCTCAGTTTGAAGG+GGG - chr5_1:43608746-43608765 None:intergenic 50.0%
GTGACACCCTCAGTTTGAAG+GGG - chr5_1:43608747-43608766 None:intergenic 50.0%
GCCATTTGGCCACAACAGTA+GGG + chr5_1:43608997-43609016 Msa0731940:intron 50.0%
CCATTTGGCCACAACAGTAG+GGG + chr5_1:43608998-43609017 Msa0731940:intron 50.0%
!! TCTCTGAGGAGCTTTTGCTC+TGG + chr5_1:43609081-43609100 Msa0731940:intron 50.0%
!! CTCTGAGGAGCTTTTGCTCT+GGG + chr5_1:43609082-43609101 Msa0731940:intron 50.0%
GGTAGGTCGGACCAATTGAT+AGG - chr5_1:43609187-43609206 None:intergenic 50.0%
GTTTCCTTCTCGTATCCGGT+AGG - chr5_1:43609204-43609223 None:intergenic 50.0%
CCATCCATCTCCGATAACAC+TGG - chr5_1:43609226-43609245 None:intergenic 50.0%
CCAGTGTTATCGGAGATGGA+TGG + chr5_1:43609223-43609242 Msa0731940:intron 50.0%
ATCCTGCTGGATGGATCACA+AGG + chr5_1:43609290-43609309 Msa0731940:intron 50.0%
TCCTGCTGGATGGATCACAA+GGG + chr5_1:43609291-43609310 Msa0731940:intron 50.0%
! GCAGTGGGCTTTCATGAGTA+TGG + chr5_1:43609360-43609379 Msa0731940:intron 50.0%
GTGGGCTTTCATGAGTATGG+AGG + chr5_1:43609363-43609382 Msa0731940:intron 50.0%
AGTCAGCATCTGGGTTCTCT+TGG - chr5_1:43609423-43609442 None:intergenic 50.0%
AAGAGAACCCAGATGCTGAC+TGG + chr5_1:43609422-43609441 Msa0731940:intron 50.0%
! TCAACAGCCTTTTCCGACGA+AGG - chr5_1:43609637-43609656 None:intergenic 50.0%
GGAAAAAGAGACCAAGAGGG+TGG + chr5_1:43609781-43609800 Msa0731940:intron 50.0%
!! TGTGGCTTGGTGGTTTGAAG+GGG + chr5_1:43609879-43609898 Msa0731940:intron 50.0%
AGGTTCCAACAATGGGATCC+TGG + chr5_1:43609910-43609929 Msa0731940:intron 50.0%
GGTTCCAACAATGGGATCCT+GGG + chr5_1:43609911-43609930 Msa0731940:intron 50.0%
GTTCCAACAATGGGATCCTG+GGG + chr5_1:43609912-43609931 Msa0731940:intron 50.0%
TTCCAACAATGGGATCCTGG+GGG + chr5_1:43609913-43609932 Msa0731940:intron 50.0%
ATCCTGGGGGCAAAGGATTA+TGG + chr5_1:43609926-43609945 Msa0731940:intron 50.0%
TCCTGGGGGCAAAGGATTAT+GGG + chr5_1:43609927-43609946 Msa0731940:intron 50.0%
GGGATGATAACTCAGCCTTG+AGG + chr5_1:43609948-43609967 Msa0731940:intron 50.0%
!!! GGACAAGGCTGTTTTTCCAG+CGG + chr5_1:43609969-43609988 Msa0731940:intron 50.0%
!!! AAGGCTGTTTTTCCAGCGGT+CGG + chr5_1:43609973-43609992 Msa0731940:intron 50.0%
TTCCAGCGGTCGGTAATGTT+AGG + chr5_1:43609983-43610002 Msa0731940:intron 50.0%
TACCTAACATTACCGACCGC+TGG - chr5_1:43609988-43610007 None:intergenic 50.0%
!! CGGTAATGTTAGGTATCGGG+TGG + chr5_1:43609993-43610012 Msa0731940:intron 50.0%
GCCATTTGGCCACAACAGTA+GGG + chr5_1:43608997-43609016 Msa0731940:intron 50.0%
CCATTTGGCCACAACAGTAG+GGG + chr5_1:43608998-43609017 Msa0731940:intron 50.0%
!! TCTCTGAGGAGCTTTTGCTC+TGG + chr5_1:43609081-43609100 Msa0731940:intron 50.0%
!! CTCTGAGGAGCTTTTGCTCT+GGG + chr5_1:43609082-43609101 Msa0731940:intron 50.0%
!! CTCTGAGGAGCTTTTGCTCT+GGG - chr5_1:43609082-43609101 None:intergenic 50.0%
!! TCTCTGAGGAGCTTTTGCTC+TGG - chr5_1:43609081-43609100 None:intergenic 50.0%
CCATTTGGCCACAACAGTAG+GGG - chr5_1:43608998-43609017 None:intergenic 50.0%
GCCATTTGGCCACAACAGTA+GGG - chr5_1:43608997-43609016 None:intergenic 50.0%
ACCACCCGATACCTAACAAG+TGG + chr5_1:43610739-43610758 Msa0731940:intron 50.0%
!! TCCACTTGTTAGGTATCGGG+TGG - chr5_1:43610743-43610762 None:intergenic 50.0%
GGGCTAGAGAAACTGCACTA+AGG + chr5_1:43610903-43610922 Msa0731940:intron 50.0%
GGAAACAAACACTAGTGGCC+AGG - chr5_1:43611048-43611067 None:intergenic 50.0%
!! ATTTGGTGTCTTGGTGGGCA+AGG - chr5_1:43611069-43611088 None:intergenic 50.0%
GCCCACCAAGACACCAAATT+AGG + chr5_1:43611070-43611089 Msa0731940:intron 50.0%
!! CCGGGTTTTGTGATGCTGAT+TGG - chr5_1:43611148-43611167 None:intergenic 50.0%
CAAAACCCGGTGATTGCAAG+TGG + chr5_1:43611158-43611177 Msa0731940:intron 50.0%
ACTGAGCCACTTGCAATCAC+CGG - chr5_1:43611167-43611186 None:intergenic 50.0%
TGCAAGTGGCTCAGTAGTAC+TGG + chr5_1:43611172-43611191 Msa0731940:intron 50.0%
TTACAAGGGACCCTGCATCA+TGG - chr5_1:43611215-43611234 None:intergenic 50.0%
GTTTCTATCTGCACCTCAGG+AGG - chr5_1:43611273-43611292 None:intergenic 50.0%
GAGGTTCATCACTCTCCATC+AGG - chr5_1:43611521-43611540 None:intergenic 50.0%
TGAAACAAGCCCCTAGAGCT+TGG - chr5_1:43611767-43611786 None:intergenic 50.0%
TAAGCTACACAAGGCCCCTA+TGG - chr5_1:43611792-43611811 None:intergenic 50.0%
GTATATATGGAGCAGCCTCC+TGG - chr5_1:43611845-43611864 None:intergenic 50.0%
TAACCTCGACAGAGCTGAAG+AGG + chr5_1:43612363-43612382 Msa0731940:CDS 50.0%
CACCCCTACGATTCTTACCT+TGG - chr5_1:43612598-43612617 None:intergenic 50.0%
! AGAATCGTAGGGGTGTGTTG+AGG + chr5_1:43612603-43612622 Msa0731940:intron 50.0%
AAGTAGCTCGATGGCGAAGA+AGG + chr5_1:43612723-43612742 Msa0731940:CDS 50.0%
GACTCTGTTCCTGCTGAGAT+TGG + chr5_1:43614211-43614230 Msa0731940:intron 50.0%
! TTGGTGGGTGTTTGCCGAAT+CGG + chr5_1:43614260-43614279 Msa0731940:intron 50.0%
CTTATAGGAGCCAAGTGCAC+TGG - chr5_1:43614944-43614963 None:intergenic 50.0%
CAGTGCACTTGGCTCCTATA+AGG + chr5_1:43614942-43614961 Msa0731940:intron 50.0%
! TGTTCTTTAGGAAGGGGACC+TGG - chr5_1:43615612-43615631 None:intergenic 50.0%
AACATGCGAATGGTCTCCCT+GGG + chr5_1:43615730-43615749 Msa0731940:CDS 50.0%
! GAAGCATCCTTCACACCAGA+AGG - chr5_1:43615896-43615915 None:intergenic 50.0%
TGGATGTAAACTCCCCCCTT+TGG - chr5_1:43616176-43616195 None:intergenic 50.0%
! GGAGTGAAGTGTTCTGATCG+TGG - chr5_1:43616343-43616362 None:intergenic 50.0%
ATGAAGCTGAAGAACGAGCG+AGG + chr5_1:43616640-43616659 Msa0731940:CDS 50.0%
TGAAGCTGAAGAACGAGCGA+GGG + chr5_1:43616641-43616660 Msa0731940:CDS 50.0%
! TGTACTTTAGGAAGGGGACC+TGG - chr5_1:43618431-43618450 None:intergenic 50.0%
CAACGGTTGCATCTTGCTGA+AGG - chr5_1:43618507-43618526 None:intergenic 50.0%
GTTCAATCCGAGGAGACCAT+TGG - chr5_1:43618563-43618582 None:intergenic 50.0%
TGGGATTCTCGTTCAATCCG+AGG - chr5_1:43618573-43618592 None:intergenic 50.0%
!! TTTTTGGTCACCTGTGAGCC+GGG + chr5_1:43618615-43618634 Msa0731940:CDS 50.0%
! ACCTGTGAGCCGGGTATTTT+TGG + chr5_1:43618624-43618643 Msa0731940:CDS 50.0%
TCCAAAAATACCCGGCTCAC+AGG - chr5_1:43618628-43618647 None:intergenic 50.0%
! TGGTCCTTCTGAAGAGGAAG+TGG + chr5_1:43618719-43618738 Msa0731940:CDS 50.0%
CGTTCCACTTCCTCTTCAGA+AGG - chr5_1:43618726-43618745 None:intergenic 50.0%
CTGGAGAATAAACTCCTCCC+TGG - chr5_1:43618932-43618951 None:intergenic 50.0%
CAGGGAGGAGTTTATTCTCC+AGG + chr5_1:43618930-43618949 Msa0731940:CDS 50.0%
GAATCCGAACAGAATCTCCG+CGG + chr5_1:43619039-43619058 Msa0731940:intron 50.0%
GAAGTGAACTGTTCTGACCG+CGG - chr5_1:43619059-43619078 None:intergenic 50.0%
GGTGGAAGTGAGAGCTGTAG+AGG - chr5_1:43605787-43605806 None:intergenic 55.0%
!! AAGAGACATGGTGGTGGTGG+TGG - chr5_1:43605842-43605861 None:intergenic 55.0%
GATTTCCGGGGGAAGAGACA+TGG - chr5_1:43605854-43605873 None:intergenic 55.0%
TCGAGGGTTTGGGAGGAGAT+GGG - chr5_1:43605919-43605938 None:intergenic 55.0%
CTTGATGTCGAGGGTTTGGG+AGG - chr5_1:43605926-43605945 None:intergenic 55.0%
TGAAGCGTGTGTGAATGCGC+TGG + chr5_1:43606140-43606159 Msa0731940:five_prime_UTR 55.0%
GGCGGAGTGTGAGAATCTGT+TGG + chr5_1:43606200-43606219 Msa0731940:five_prime_UTR 55.0%
AGCTGAAGAACAAGCGAGGG+AGG + chr5_1:43606299-43606318 Msa0731940:five_prime_UTR 55.0%
GTGTTTGCGAGCTGAGGAGT+TGG + chr5_1:43606323-43606342 Msa0731940:five_prime_UTR 55.0%
TGAGGGGAAGGAAAGGGAAG+AGG + chr5_1:43606962-43606981 Msa0731940:intron 55.0%
TCTCTGTATGAGAGGGAGGG+AGG + chr5_1:43607206-43607225 Msa0731940:intron 55.0%
CTCTGTATGAGAGGGAGGGA+GGG + chr5_1:43607207-43607226 Msa0731940:intron 55.0%
AGCCGGACTACGAAGTCTTG+GGG - chr5_1:43607634-43607653 None:intergenic 55.0%
GAGCCGGACTACGAAGTCTT+GGG - chr5_1:43607635-43607654 None:intergenic 55.0%
AGCTGCTGTCAATGTGGAGC+GGG + chr5_1:43608386-43608405 Msa0731940:CDS 55.0%
!! CAGTGGTGTTAGGTATCGGG+TGG + chr5_1:43608803-43608822 Msa0731940:intron 55.0%
GGCCATTTGGCCACAACAGT+AGG + chr5_1:43608996-43609015 Msa0731940:intron 55.0%
CCCCTACTGTTGTGGCCAAA+TGG - chr5_1:43610534-43610553 None:intergenic 55.0%
CCTTCTCGTATCCGGTAGGT+CGG - chr5_1:43609200-43609219 None:intergenic 55.0%
TTTACTGGGACGGATCCTGC+TGG + chr5_1:43609277-43609296 Msa0731940:intron 55.0%
GGTCAACCCACAACCTATGC+CGG + chr5_1:43609804-43609823 Msa0731940:intron 55.0%
ATGGCTCCGGCATAGGTTGT+GGG - chr5_1:43609813-43609832 None:intergenic 55.0%
AATGGCTCCGGCATAGGTTG+TGG - chr5_1:43609814-43609833 None:intergenic 55.0%
!! GTGGCTTGGTGGTTTGAAGG+GGG + chr5_1:43609880-43609899 Msa0731940:intron 55.0%
GGTTTGAAGGGGGCTTGTCA+AGG + chr5_1:43609890-43609909 Msa0731940:intron 55.0%
CCTGGGGGCAAAGGATTATG+GGG + chr5_1:43609928-43609947 Msa0731940:intron 55.0%
GGCCATTTGGCCACAACAGT+AGG + chr5_1:43608996-43609015 Msa0731940:intron 55.0%
CCCCTACTGTTGTGGCCAAA+TGG - chr5_1:43610534-43610553 None:intergenic 55.0%
CCCCTACTGTTGTGGCCAAA+TGG + chr5_1:43610534-43610553 Msa0731940:intron 55.0%
GGCCATTTGGCCACAACAGT+AGG - chr5_1:43608996-43609015 None:intergenic 55.0%
TCTGCCCACTGATCTTGAGC+AGG + chr5_1:43610782-43610801 Msa0731940:intron 55.0%
GGTCATCAAGAAGGAGCTGC+TGG - chr5_1:43610819-43610838 None:intergenic 55.0%
TCTGTATTCCGCCTCTGCAC+TGG + chr5_1:43611021-43611040 Msa0731940:intron 55.0%
CTGAGCCACTTGCAATCACC+GGG - chr5_1:43611166-43611185 None:intergenic 55.0%
!! AGTGGCTCAGTAGTACTGGC+AGG + chr5_1:43611176-43611195 Msa0731940:intron 55.0%
GCTTTCCAGTGATCCTCCTG+AGG + chr5_1:43611257-43611276 Msa0731940:intron 55.0%
ACAGAGCTGAAGAGGAGGTG+AGG + chr5_1:43612371-43612390 Msa0731940:intron 55.0%
TGTGCTGCCAGTTTCCTGAG+AGG + chr5_1:43613860-43613879 Msa0731940:intron 55.0%
! TGGTGGGTGTTTGCCGAATC+GGG + chr5_1:43614261-43614280 Msa0731940:intron 55.0%
GTTTGCCGAATCGGGTGTGT+AGG + chr5_1:43614269-43614288 Msa0731940:intron 55.0%
AAAGGGTGACCCAGTGCACT+TGG + chr5_1:43614931-43614950 Msa0731940:intron 55.0%
GAACATGCGAATGGTCTCCC+TGG + chr5_1:43615729-43615748 Msa0731940:CDS 55.0%
CGGGATTCTCGTTCAACCCA+GGG - chr5_1:43615749-43615768 None:intergenic 55.0%
TCGGGATTCTCGTTCAACCC+AGG - chr5_1:43615750-43615769 None:intergenic 55.0%
GAATGGCCCTTCTGGTGTGA+AGG + chr5_1:43615886-43615905 Msa0731940:intron 55.0%
! CGAGAATGGCCCTTCTGAAG+AGG + chr5_1:43615956-43615975 Msa0731940:CDS 55.0%
! TGGCCCTTCTGAAGAGGAAG+TGG + chr5_1:43615962-43615981 Msa0731940:CDS 55.0%
GAACACGCCAATGGTCTCCT+CGG + chr5_1:43618553-43618572 Msa0731940:intron 55.0%
CTGACCGCGGAGATTCTGTT+CGG - chr5_1:43619046-43619065 None:intergenic 55.0%
!! CATGGTGGTGGTGGTGGTAG+CGG - chr5_1:43605836-43605855 None:intergenic 60.0%
!! GGGAAGAGACATGGTGGTGG+TGG - chr5_1:43605845-43605864 None:intergenic 60.0%
CACCACCATGTCTCTTCCCC+CGG + chr5_1:43605846-43605865 Msa0731940:five_prime_UTR 60.0%
TTCCGGGGGAAGAGACATGG+TGG - chr5_1:43605851-43605870 None:intergenic 60.0%
GTCGAGGGTTTGGGAGGAGA+TGG - chr5_1:43605920-43605939 None:intergenic 60.0%
GGCGCGAAGCTTGATGTCGA+GGG - chr5_1:43605935-43605954 None:intergenic 60.0%
AGGCGCGAAGCTTGATGTCG+AGG - chr5_1:43605936-43605955 None:intergenic 60.0%
! GGAGCGAAGCGTTCTGATCG+TGG - chr5_1:43605981-43606000 None:intergenic 60.0%
AGGAATGGGGTCGTATGCGG+AGG + chr5_1:43607165-43607184 Msa0731940:intron 60.0%
TGTATGAGAGGGAGGGAGGG+AGG + chr5_1:43607210-43607229 Msa0731940:intron 60.0%
GTATGAGAGGGAGGGAGGGA+GGG + chr5_1:43607211-43607230 Msa0731940:intron 60.0%
GAGAGGGAGAGGGAGAGAGA+AGG + chr5_1:43607241-43607260 Msa0731940:intron 60.0%
AGGGAGAGGGAGAGAGAAGG+AGG + chr5_1:43607244-43607263 Msa0731940:intron 60.0%
GGGAGAGGGAGAGAGAAGGA+GGG + chr5_1:43607245-43607264 Msa0731940:intron 60.0%
AGAGGGAGAGAGAAGGAGGG+AGG + chr5_1:43607248-43607267 Msa0731940:intron 60.0%
GAGGGAGAGAGAAGGAGGGA+GGG + chr5_1:43607249-43607268 Msa0731940:intron 60.0%
GGAGCCGGACTACGAAGTCT+TGG - chr5_1:43607636-43607655 None:intergenic 60.0%
CTGTCAATGTGGAGCGGGTG+AGG + chr5_1:43608391-43608410 Msa0731940:intron 60.0%
CCGACCTACCGGATACGAGA+AGG + chr5_1:43609197-43609216 Msa0731940:intron 60.0%
GCCCTTGTGATCCATCCAGC+AGG - chr5_1:43609295-43609314 None:intergenic 60.0%
AGAGGGAATGGCTCCGGCAT+AGG - chr5_1:43609820-43609839 None:intergenic 60.0%
TGCCCCCAGGATCCCATTGT+TGG - chr5_1:43609918-43609937 None:intergenic 60.0%
CAATGGGATCCTGGGGGCAA+AGG + chr5_1:43609919-43609938 Msa0731940:intron 60.0%
CCCCATAATCCTTTGCCCCC+AGG - chr5_1:43609931-43609950 None:intergenic 60.0%
CTGCACCTCAGGAGGATCAC+TGG - chr5_1:43611265-43611284 None:intergenic 60.0%
CCTCCTCTTCAGCTCTGTCG+AGG - chr5_1:43612369-43612388 None:intergenic 60.0%
CCTCGACAGAGCTGAAGAGG+AGG + chr5_1:43612366-43612385 Msa0731940:CDS 60.0%
AGCTGAAGAACGAGCGAGGG+AGG + chr5_1:43616644-43616663 Msa0731940:CDS 60.0%
AAAGGGTGGCTCAGTGCACG+AGG + chr5_1:43617267-43617286 Msa0731940:intron 60.0%
CAGTGCACGAGGCTCCCATA+AGG + chr5_1:43617278-43617297 Msa0731940:intron 60.0%
GAGGCTCAAGGTAGCCAGCT+AGG - chr5_1:43618032-43618051 None:intergenic 60.0%
CGGGGGAAGAGACATGGTGG+TGG - chr5_1:43605848-43605867 None:intergenic 65.0%
! GGAGGCGTGTTTGCGAGCTG+AGG + chr5_1:43606317-43606336 Msa0731940:five_prime_UTR 65.0%
GAGGGAGGGAGAGAGGGAGA+GGG + chr5_1:43607225-43607244 Msa0731940:intron 65.0%
AGGGAGAGAGGGAGAGGGAG+AGG + chr5_1:43607230-43607249 Msa0731940:intron 65.0%
GGGAGAGAGGGAGAGGGAGA+GGG + chr5_1:43607231-43607250 Msa0731940:intron 65.0%
CTGGGACGGATCCTGCTGGA+TGG + chr5_1:43609281-43609300 Msa0731940:intron 65.0%
! GTGGGTTGACCCCACCCTCT+TGG - chr5_1:43609795-43609814 None:intergenic 65.0%
TTCCGCCTCTGCACTGGACC+TGG + chr5_1:43611027-43611046 Msa0731940:intron 65.0%
AGTGGCCAGGTCCAGTGCAG+AGG - chr5_1:43611035-43611054 None:intergenic 65.0%
AGGGAGGGAGGGAGGGAGAG+AGG + chr5_1:43607218-43607237 Msa0731940:intron 70.0%
GGGAGGGAGGGAGGGAGAGA+GGG + chr5_1:43607219-43607238 Msa0731940:intron 70.0%
GGAGGGAGGGAGAGAGGGAG+AGG + chr5_1:43607224-43607243 Msa0731940:intron 70.0%
GGCCAGGTCCAGTGCAGAGG+CGG - chr5_1:43611032-43611051 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 43605651 43619459 43605651 ID=Msa0731940;Name=Msa0731940
chr5_1 mRNA 43605651 43619459 43605651 ID=Msa0731940-mRNA-1;Parent=Msa0731940;Name=Msa0731940-mRNA-1;_AED=0.23;_eAED=0.23;_QI=615|0.45|0.5|0.91|0.90|0.91|12|0|519
chr5_1 exon 43605651 43606043 43605651 ID=Msa0731940-mRNA-1:exon:12435;Parent=Msa0731940-mRNA-1
chr5_1 exon 43606138 43606404 43606138 ID=Msa0731940-mRNA-1:exon:12436;Parent=Msa0731940-mRNA-1
chr5_1 exon 43608253 43608407 43608253 ID=Msa0731940-mRNA-1:exon:12437;Parent=Msa0731940-mRNA-1
chr5_1 exon 43612282 43612387 43612282 ID=Msa0731940-mRNA-1:exon:12438;Parent=Msa0731940-mRNA-1
chr5_1 exon 43612477 43612599 43612477 ID=Msa0731940-mRNA-1:exon:12439;Parent=Msa0731940-mRNA-1
chr5_1 exon 43612694 43612802 43612694 ID=Msa0731940-mRNA-1:exon:12440;Parent=Msa0731940-mRNA-1
chr5_1 exon 43615613 43615841 43615613 ID=Msa0731940-mRNA-1:exon:12441;Parent=Msa0731940-mRNA-1
chr5_1 exon 43615950 43616145 43615950 ID=Msa0731940-mRNA-1:exon:12442;Parent=Msa0731940-mRNA-1
chr5_1 exon 43616639 43616773 43616639 ID=Msa0731940-mRNA-1:exon:12443;Parent=Msa0731940-mRNA-1
chr5_1 exon 43618425 43618456 43618425 ID=Msa0731940-mRNA-1:exon:12444;Parent=Msa0731940-mRNA-1
chr5_1 exon 43618554 43618951 43618554 ID=Msa0731940-mRNA-1:exon:12445;Parent=Msa0731940-mRNA-1
chr5_1 exon 43619428 43619459 43619428 ID=Msa0731940-mRNA-1:exon:12446;Parent=Msa0731940-mRNA-1
chr5_1 five_prime_UTR 43605651 43606043 43605651 ID=Msa0731940-mRNA-1:five_prime_utr;Parent=Msa0731940-mRNA-1
chr5_1 five_prime_UTR 43606138 43606359 43606138 ID=Msa0731940-mRNA-1:five_prime_utr;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43606360 43606404 43606360 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43608253 43608407 43608253 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43612282 43612387 43612282 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43612477 43612599 43612477 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43612694 43612802 43612694 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43615613 43615841 43615613 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43615950 43616145 43615950 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43616639 43616773 43616639 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43618425 43618456 43618425 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43618554 43618951 43618554 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
chr5_1 CDS 43619428 43619459 43619428 ID=Msa0731940-mRNA-1:cds;Parent=Msa0731940-mRNA-1
Gene Sequence

>Msa0731940

ATGTATCAATTGGAATTGAAGAAATGTCGCCAAGAGAATGAATCGGTTGACTCTTCTTCGGCAAGCACACATGGGGATGAGAGTTTGCTTGACTCTCTTTTGGCAACAGTTACTACTAAAGATGAGTCTTCTACATATGAATTCTTGGTTGCAAATAGTGAAAATGAGCATTGTAAAAAGCTGCTGTCAATGTGGAGCGGCTTAAAGCAATCAACTCGGAGAGTATTGTCTATTGTTGCTGAATTGATGTCTCTAGAAAAGGACAAAGAGCATCTAAGGATTAACCTCGACAGAGCTGAAGAGGAGGGCAAACTACTATCTGTTGAAAATAGCATATTGGAAAAGGAGAACAGAAGGTTAGTGATGAAATACAAGGAAAGTAGTCATAGAGAATCTGGTGGGAAACTTACCAATAGTACATCTGCCAAGTCAAACAAGAGAAAGTCCAATTCAAAGACAAGTAGCTCGATGGCGAAGAAGGTTGATTTTGATGATTTAGATTCAGTATCACCTAGACAAGGATTGTCACCCTTGCAAAGTCCCCTTCCTAAAGAACAAATAATAGAACACGAGAAGAAAATTGGCCTTTGGGGAATAACAACACTACTTTCAGCAGATGCAACTGTTGTTGGAAAAATATTTTTAATTCTAACAGAACATGCGAATGGTCTCCCTGGGTTGAACGAGAATCCCGAAACAGTTCCAAAAAGGAAAAAATTTTGGTCACCTGTGAAGGCTGTACATTTTAGGTTCAAAATATTTGTTGGTTTCGGCGAGAATGGCCCTTCTGAAGAGGAAGTGGAAAGTGCTTCATTTAAGATGTGGTTTATTGGACATGGATTTAGCAATGAGAGTCTTGCTGCAAATGGAAACTCAAAACCTGACATAGTAGTTATAACGAGAATAACCGGACCGAAAATGGGTTATGTAACGACACTGGTTATTATGATTCCGAGTGCTCTTAATGAAGCTGAAGAACGAGCGAGGGAGGCTTGTTTGCGAGCTGAAGAGTTGGAACGTGATTTGGTTATTCATCAGATGGAGTCGAAGAAATCTCAGCAAGAGAATGCACAAGCGACCAAAAGAGCAAAGCCTATGATTCCAGGTCCCCTTCCTAAAGTACAAATGAAAACACGCCAATGGTCTCCTCGGATTGAACGAGAATCCCAAGACGGTTCAAAAAAGGAAAGTTTTTTGGTCACCTGTGAGCCGGGTATTTTTGGAAGTACCAGTTTTGGAAGATGGCTTCTTTTGAAATATCCATCAGTCTTTATCCTAGGTAGTTGCAGCGAAAATGGTCCTTCTGAAGAGGAAGTGGAACGTGCTTCATTCAAGATATGGTGTATTGGACATGGATTTAACAATGAGAGTCTTGCTGCAAATGGAAACTCAAAACCTGACGTGGAAGTTATAACGAGAATAACCGAACTCGAAATGGGTGATGTAACGACGCCGATAATTATGATTGAGTGTGCTCTTGTACTTCTTCGAAAAGAAACGAATTACCAGGGAGGAGTTTATTCTCCAGGTGGAGTTGAAGAAATGTCAGCAAGAGAATGA

Protein sequence

>Msa0731940

MYQLELKKCRQENESVDSSSASTHGDESLLDSLLATVTTKDESSTYEFLVANSENEHCKKLLSMWSGLKQSTRRVLSIVAELMSLEKDKEHLRINLDRAEEEGKLLSVENSILEKENRRLVMKYKESSHRESGGKLTNSTSAKSNKRKSNSKTSSSMAKKVDFDDLDSVSPRQGLSPLQSPLPKEQIIEHEKKIGLWGITTLLSADATVVGKIFLILTEHANGLPGLNENPETVPKRKKFWSPVKAVHFRFKIFVGFGENGPSEEEVESASFKMWFIGHGFSNESLAANGNSKPDIVVITRITGPKMGYVTTLVIMIPSALNEAEERAREACLRAEELERDLVIHQMESKKSQQENAQATKRAKPMIPGPLPKVQMKTRQWSPRIERESQDGSKKESFLVTCEPGIFGSTSFGRWLLLKYPSVFILGSCSENGPSEEEVERASFKIWCIGHGFNNESLAANGNSKPDVEVITRITELEMGDVTTPIIMIECALVLLRKETNYQGGVYSPGGVEEMSARE*