Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788250 | sp|Q84VX0|RFS1_ARATH | 71.711 | 760 | 206 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788250 | G7K4U6 | 97.105 | 760 | 22 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0788250 | Msa0825420 | 0.907280 | 6.009550e-81 | -8.615850e-47 |
| Msa0788250 | Msa0864610 | 0.923775 | 1.701144e-89 | -8.615850e-47 |
| Msa0788250 | Msa0945040 | 0.997140 | 1.608727e-237 | -8.615850e-47 |
| Msa0788250 | Msa1401820 | 0.957689 | 1.479344e-115 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788250 | MtrunA17_Chr5g0447201 | 97.105 | 760 | 22 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1535 |
| Msa0788250 | MtrunA17_Chr1g0173521 | 58.816 | 760 | 293 | 2 | 1 | 760 | 58 | 797 | 0.0 | 942 |
| Msa0788250 | MtrunA17_Chr4g0064311 | 54.183 | 753 | 316 | 7 | 1 | 750 | 98 | 824 | 0.0 | 844 |
| Msa0788250 | MtrunA17_Chr7g0257731 | 58.966 | 619 | 226 | 4 | 165 | 760 | 1 | 614 | 0.0 | 772 |
| Msa0788250 | MtrunA17_Chr3g0116641 | 47.193 | 748 | 381 | 5 | 1 | 744 | 1 | 738 | 0.0 | 724 |
| Msa0788250 | MtrunA17_Chr6g0449521 | 38.860 | 772 | 426 | 15 | 7 | 756 | 35 | 782 | 0.0 | 541 |
| Msa0788250 | MtrunA17_Chr4g0058701 | 39.300 | 771 | 390 | 15 | 7 | 735 | 22 | 756 | 0.0 | 539 |
| Msa0788250 | MtrunA17_Chr3g0117141 | 38.562 | 765 | 420 | 12 | 7 | 742 | 28 | 771 | 7.12e-179 | 531 |
| Msa0788250 | MtrunA17_Chr7g0267991 | 37.684 | 475 | 264 | 8 | 291 | 747 | 384 | 844 | 1.16e-94 | 313 |
| Msa0788250 | MtrunA17_Chr7g0267991 | 34.818 | 247 | 137 | 3 | 42 | 282 | 71 | 299 | 5.79e-41 | 161 |
| Msa0788250 | MtrunA17_Chr5g0427081 | 96.454 | 141 | 5 | 0 | 520 | 660 | 10 | 150 | 4.28e-92 | 285 |
| Msa0788250 | MtrunA17_Chr8g0380141 | 43.709 | 302 | 157 | 4 | 296 | 587 | 380 | 678 | 3.85e-78 | 265 |
| Msa0788250 | MtrunA17_Chr8g0380141 | 34.959 | 246 | 138 | 4 | 42 | 282 | 70 | 298 | 1.36e-41 | 162 |
| Msa0788250 | MtrunA17_Chr1g0201161 | 41.883 | 308 | 164 | 5 | 284 | 579 | 370 | 674 | 2.88e-70 | 248 |
| Msa0788250 | MtrunA17_Chr1g0201161 | 33.865 | 251 | 134 | 4 | 42 | 282 | 75 | 303 | 3.79e-39 | 156 |
| Msa0788250 | MtrunA17_Chr1g0201161 | 29.885 | 174 | 114 | 4 | 570 | 739 | 734 | 903 | 1.71e-13 | 74.3 |
| Msa0788250 | MtrunA17_Chr7g0270181 | 36.975 | 357 | 204 | 6 | 401 | 747 | 4 | 349 | 7.18e-65 | 220 |
| Msa0788250 | MtrunA17_Chr7g0257741 | 57.516 | 153 | 55 | 2 | 1 | 152 | 1 | 144 | 1.05e-50 | 174 |
| Msa0788250 | MtrunA17_Chr3g0139771 | 78.261 | 69 | 15 | 0 | 681 | 749 | 1 | 69 | 6.15e-16 | 73.6 |
| Msa0788250 | MtrunA17_Chr8g0380131 | 38.043 | 92 | 54 | 1 | 642 | 733 | 3 | 91 | 1.46e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788250 | AT1G55740.1 | 71.711 | 760 | 206 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1125 |
| Msa0788250 | AT3G57520.1 | 59.335 | 782 | 283 | 4 | 1 | 758 | 1 | 771 | 0.0 | 991 |
| Msa0788250 | AT3G57520.2 | 62.969 | 667 | 236 | 2 | 1 | 667 | 1 | 656 | 0.0 | 912 |
| Msa0788250 | AT5G20250.4 | 54.290 | 746 | 325 | 6 | 1 | 744 | 96 | 827 | 0.0 | 851 |
| Msa0788250 | AT5G20250.3 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0788250 | AT5G20250.1 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0788250 | AT5G20250.2 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0788250 | AT3G57520.3 | 62.852 | 568 | 197 | 3 | 1 | 568 | 1 | 554 | 0.0 | 774 |
| Msa0788250 | AT5G40390.1 | 38.262 | 771 | 425 | 16 | 9 | 748 | 24 | 774 | 1.76e-177 | 528 |
| Msa0788250 | AT4G01970.1 | 37.634 | 465 | 268 | 10 | 296 | 742 | 398 | 858 | 9.92e-97 | 320 |
| Msa0788250 | AT4G01970.1 | 33.544 | 316 | 160 | 7 | 21 | 305 | 49 | 345 | 2.14e-42 | 166 |
| Msa0788250 | AT4G01970.2 | 37.634 | 465 | 268 | 10 | 296 | 742 | 445 | 905 | 3.67e-96 | 319 |
| Msa0788250 | AT4G01970.2 | 33.544 | 316 | 160 | 7 | 21 | 305 | 96 | 392 | 3.34e-42 | 166 |
Find 211 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTCCTTGCCGTCTTTC+TGG | 0.066893 | 5_2:-74681311 | None:intergenic |
| TTAGAGCTTCAGATGATTTC+TGG | 0.146587 | 5_2:+74682028 | Msa0788250:CDS |
| TCTCGGGATTTCATGGTAAT+TGG | 0.169806 | 5_2:-74683101 | None:intergenic |
| TAAACCAATAGGAGCAAATT+TGG | 0.190235 | 5_2:-74683171 | None:intergenic |
| TTAGATACCATTGCAATTAA+TGG | 0.192004 | 5_2:+74681636 | Msa0788250:CDS |
| CAATCCTTGGTTGGTCTTCC+TGG | 0.200624 | 5_2:-74682605 | None:intergenic |
| GTTCTTGTTACTCCTGCTTC+TGG | 0.263308 | 5_2:+74679448 | Msa0788250:CDS |
| AATCATTACCTGACATAAAT+AGG | 0.266033 | 5_2:-74682305 | None:intergenic |
| GGGACTCATTTGGTGTTCAT+TGG | 0.269955 | 5_2:+74680345 | Msa0788250:CDS |
| GTTTCTTTCTCATTTGCATT+TGG | 0.276272 | 5_2:+74679252 | Msa0788250:five_prime_UTR |
| TTGATCAATGGTGCATTTCT+TGG | 0.278920 | 5_2:+74679478 | Msa0788250:CDS |
| GGACTCATTTGGTGTTCATT+GGG | 0.286060 | 5_2:+74680346 | Msa0788250:CDS |
| GAGTTTAGTTCCGAATTTAA+TGG | 0.294252 | 5_2:+74683227 | Msa0788250:CDS |
| CGACAGTGGCAGATGATAAA+TGG | 0.300808 | 5_2:+74682916 | Msa0788250:CDS |
| CAACAAATGATTCCGTTATC+AGG | 0.308551 | 5_2:-74681855 | None:intergenic |
| GCACGCAATAACAGGATATT+GGG | 0.318440 | 5_2:+74681512 | Msa0788250:CDS |
| TTCATATTCTCGGGATTTCA+TGG | 0.321029 | 5_2:-74683108 | None:intergenic |
| GCACAGTCACTGACATCATT+AGG | 0.326937 | 5_2:+74682871 | Msa0788250:CDS |
| GGTGCCAAATTTGCTCCTAT+TGG | 0.331580 | 5_2:+74683167 | Msa0788250:CDS |
| TTAATCAAGATGTTTAATTC+AGG | 0.335147 | 5_2:+74683191 | Msa0788250:CDS |
| CCAAACCAGTTCAACATATC+TGG | 0.338607 | 5_2:-74680870 | None:intergenic |
| ATTTACAACTCCATTAAATT+CGG | 0.352036 | 5_2:-74683237 | None:intergenic |
| TCTGGTGGTTCTTTGATCAA+TGG | 0.352616 | 5_2:+74679466 | Msa0788250:CDS |
| CATCTGCCACTGTCGATAAA+TGG | 0.356356 | 5_2:-74682908 | None:intergenic |
| GGCACGCAATAACAGGATAT+TGG | 0.359380 | 5_2:+74681511 | Msa0788250:CDS |
| CAGAATATCCTTGAAACTCT+TGG | 0.359438 | 5_2:+74681756 | Msa0788250:CDS |
| ATATTAAGAGCTAAACTTCC+AGG | 0.366671 | 5_2:+74682587 | Msa0788250:CDS |
| TTTGCTTATTGAAGCACATA+AGG | 0.367083 | 5_2:+74679994 | Msa0788250:CDS |
| TGGAACATGAATGACTATTC+TGG | 0.373902 | 5_2:+74682768 | Msa0788250:CDS |
| CATTTGGTGTTCATTGGGGC+TGG | 0.375289 | 5_2:+74680351 | Msa0788250:CDS |
| TGGTGTTTCTTCTGATCAAA+AGG | 0.383403 | 5_2:+74679498 | Msa0788250:CDS |
| GGAGCAAATTTGGCACCATT+TGG | 0.387548 | 5_2:-74683161 | None:intergenic |
| CTGGATTCTCGTCGTGGATA+AGG | 0.394790 | 5_2:-74682848 | None:intergenic |
| TTCAGTTATGAGGAAGAATC+AGG | 0.395624 | 5_2:+74683350 | Msa0788250:CDS |
| CTAGCATCCGCTGGTATTGA+TGG | 0.397699 | 5_2:+74681717 | Msa0788250:CDS |
| CATTGATATAACTCTTTCTC+CGG | 0.410663 | 5_2:-74683398 | None:intergenic |
| CTTGATGGTGTTAGGGAAGA+AGG | 0.410849 | 5_2:+74679402 | Msa0788250:CDS |
| GCATTTGTTATGACTTCATA+AGG | 0.411544 | 5_2:-74680381 | None:intergenic |
| ATTGCAGTCTCCTCAAGATA+TGG | 0.412765 | 5_2:+74682748 | Msa0788250:intron |
| TTGACTCCAGGAGATGAGAT+AGG | 0.414473 | 5_2:-74681591 | None:intergenic |
| TGTTTCCATTCAACACCATT+GGG | 0.415542 | 5_2:-74681125 | None:intergenic |
| AAGATTGAAGTCGTGGTGTC+CGG | 0.416723 | 5_2:-74682534 | None:intergenic |
| GTGAATTTATGCAGCCAGAT+TGG | 0.418742 | 5_2:+74682115 | Msa0788250:CDS |
| TGAATTTATGCAGCCAGATT+GGG | 0.419847 | 5_2:+74682116 | Msa0788250:CDS |
| CCAGATATGTTGAACTGGTT+TGG | 0.421533 | 5_2:+74680870 | Msa0788250:CDS |
| GCTTTCCCTATCTCATCTCC+TGG | 0.423799 | 5_2:+74681585 | Msa0788250:CDS |
| ATTGGAATAGAAACATCCTT+TGG | 0.425085 | 5_2:-74683083 | None:intergenic |
| GATGGAAACTTGATGGTGTT+AGG | 0.426147 | 5_2:+74679394 | Msa0788250:CDS |
| GATTTCAGGGCTGTTCTTCA+AGG | 0.428389 | 5_2:+74680103 | Msa0788250:CDS |
| GGAATTTGATGGGACTCATT+TGG | 0.432327 | 5_2:+74680335 | Msa0788250:CDS |
| TAATGCTTCATCTGGTTGGT+TGG | 0.433017 | 5_2:-74681616 | None:intergenic |
| AGGGAAGAAGGTTCTGAGTC+AGG | 0.435038 | 5_2:+74679414 | Msa0788250:CDS |
| TTGATGCAGTTCAAAGCGTT+CGG | 0.437922 | 5_2:+74681999 | Msa0788250:intron |
| CCATTTGGTAATTCTTTCAC+AGG | 0.443895 | 5_2:-74683146 | None:intergenic |
| CACAGTCACTGACATCATTA+GGG | 0.443981 | 5_2:+74682872 | Msa0788250:CDS |
| TACCTCTTTCCATCTCTAGC+AGG | 0.444123 | 5_2:-74682641 | None:intergenic |
| AACATCTTGATTAAACCAAT+AGG | 0.450743 | 5_2:-74683182 | None:intergenic |
| AATGACTATTCTGGAGTTGT+TGG | 0.457081 | 5_2:+74682777 | Msa0788250:CDS |
| TATGTGTGGCACGCAATAAC+AGG | 0.457665 | 5_2:+74681504 | Msa0788250:CDS |
| CCGCGTAGGTAGAACTATCT+TGG | 0.458879 | 5_2:-74680057 | None:intergenic |
| ATGACTATTCTGGAGTTGTT+GGG | 0.459794 | 5_2:+74682778 | Msa0788250:CDS |
| CTTAAAACATACCACAAAGA+TGG | 0.460266 | 5_2:-74682962 | None:intergenic |
| AGATGCCAGATATGTTGAAC+TGG | 0.461398 | 5_2:+74680865 | Msa0788250:intron |
| ATGTGAATTGTGTGAGATGC+AGG | 0.463395 | 5_2:-74682060 | None:intergenic |
| GGTGTTAAACCTGGGATTAG+TGG | 0.464175 | 5_2:+74681537 | Msa0788250:CDS |
| GGTTGGTTGGACTTGACTCC+AGG | 0.465627 | 5_2:-74681603 | None:intergenic |
| CACATTCTCTGAAGTGACAT+TGG | 0.467536 | 5_2:-74680919 | None:intergenic |
| TGTTGCTGATGGAAACTTGA+TGG | 0.470783 | 5_2:+74679387 | Msa0788250:CDS |
| ATGTTTCCATTCAACACCAT+TGG | 0.474051 | 5_2:-74681126 | None:intergenic |
| CTTATCCACGACGAGAATCC+AGG | 0.474066 | 5_2:+74682849 | Msa0788250:CDS |
| TTTCAAGAAAAGATGACTGT+AGG | 0.474623 | 5_2:+74679352 | Msa0788250:exon |
| ATGAATCACAGAACAGAGAA+AGG | 0.474977 | 5_2:-74679304 | None:intergenic |
| TCAATGAAAGTGCGCGGGTG+TGG | 0.475072 | 5_2:+74683263 | Msa0788250:CDS |
| CTGAAATCTCCTTCCAAAAG+AGG | 0.477676 | 5_2:-74680088 | None:intergenic |
| TTCAAGAAAAGATGACTGTA+GGG | 0.477683 | 5_2:+74679353 | Msa0788250:exon |
| ATGATGTCAGTGACTGTGCC+TGG | 0.481533 | 5_2:-74682867 | None:intergenic |
| CCATCAAATTCCTCCACATC+AGG | 0.481977 | 5_2:-74680324 | None:intergenic |
| ACAATACAGACGGATTGTAT+AGG | 0.482731 | 5_2:+74681886 | Msa0788250:CDS |
| ACATGAAACATATCCCAATC+TGG | 0.482945 | 5_2:-74682129 | None:intergenic |
| ATGGTATCTAATGCTTCATC+TGG | 0.485206 | 5_2:-74681624 | None:intergenic |
| GGAGCTGGTTGGTGCAAAGT+TGG | 0.487373 | 5_2:+74682816 | Msa0788250:CDS |
| ATCAGAAAATAAGCAATCCT+TGG | 0.487411 | 5_2:-74682618 | None:intergenic |
| CATGCTGCTGCAAGAGCAGT+TGG | 0.488415 | 5_2:+74682275 | Msa0788250:CDS |
| GAGGATGTCCTATTTATGTC+AGG | 0.491039 | 5_2:+74682297 | Msa0788250:CDS |
| AGATTGAAGTCGTGGTGTCC+GGG | 0.497726 | 5_2:-74682533 | None:intergenic |
| CCTGATGTGGAGGAATTTGA+TGG | 0.498094 | 5_2:+74680324 | Msa0788250:CDS |
| TATCTAATGCTTCATCTGGT+TGG | 0.499999 | 5_2:-74681620 | None:intergenic |
| CATTGGAGGCATCGATCTCT+AGG | 0.501698 | 5_2:+74681826 | Msa0788250:CDS |
| AAGTTTGTCATAATTGATGA+TGG | 0.501793 | 5_2:+74681080 | Msa0788250:CDS |
| TCTAGGAACTTTCCTGATAA+CGG | 0.503841 | 5_2:+74681843 | Msa0788250:CDS |
| ATTGAGATTTGTGTTGAAAG+TGG | 0.506532 | 5_2:+74680142 | Msa0788250:CDS |
| ATCAAGATGTTTAATTCAGG+AGG | 0.506929 | 5_2:+74683194 | Msa0788250:CDS |
| ATCCTTGAAACTCTTGGAGC+AGG | 0.507848 | 5_2:+74681762 | Msa0788250:CDS |
| AGAGGTGGAATTCAGTTATG+AGG | 0.508775 | 5_2:+74683340 | Msa0788250:CDS |
| ACTGGTTTGGATGGTGTACA+TGG | 0.510270 | 5_2:+74680883 | Msa0788250:CDS |
| ATGTGATGAATTCCCATGGC+AGG | 0.510914 | 5_2:-74681348 | None:intergenic |
| GTGTGAGATGCAGGGTCTCT+TGG | 0.512827 | 5_2:-74682051 | None:intergenic |
| GCTCTTAATATAGAACCGTC+AGG | 0.513998 | 5_2:-74682575 | None:intergenic |
| ACATACTCAAGCTTGCCAAC+AGG | 0.515300 | 5_2:-74679538 | None:intergenic |
| ATCAAAGAACCACCAGAAGC+AGG | 0.518612 | 5_2:-74679460 | None:intergenic |
| ACTTGCAAGGAAATATCATC+AGG | 0.521049 | 5_2:+74681803 | Msa0788250:CDS |
| TACTGTTGATTCAGAAGAGG+TGG | 0.521451 | 5_2:+74683325 | Msa0788250:CDS |
| TTCCAGAAAGACGGCAAGGA+AGG | 0.521640 | 5_2:+74681309 | Msa0788250:CDS |
| TCAATTATGACAAACTTAGC+AGG | 0.522019 | 5_2:-74681074 | None:intergenic |
| ACCATTGCAATTAATGGACT+CGG | 0.524368 | 5_2:+74681642 | Msa0788250:CDS |
| GTATTCAATTGTCAAGGAGC+TGG | 0.525702 | 5_2:+74682801 | Msa0788250:CDS |
| CTTGTTACTCCTGCTTCTGG+TGG | 0.525865 | 5_2:+74679451 | Msa0788250:CDS |
| CTGATGAATAAGCACCGAAA+AGG | 0.528725 | 5_2:-74683286 | None:intergenic |
| GAAAATAAGCAATCCTTGGT+TGG | 0.534266 | 5_2:-74682614 | None:intergenic |
| TTAAAACATACCACAAAGAT+GGG | 0.534469 | 5_2:-74682961 | None:intergenic |
| TTGTCATCGCGAGAGAAAGA+AGG | 0.535948 | 5_2:+74680735 | Msa0788250:CDS |
| ATGGAAACTTGATGGTGTTA+GGG | 0.536276 | 5_2:+74679395 | Msa0788250:CDS |
| TATTGGGGTGGTGTTAAACC+TGG | 0.537243 | 5_2:+74681528 | Msa0788250:CDS |
| CACTCATATCTAGCATCCGC+TGG | 0.540430 | 5_2:+74681708 | Msa0788250:CDS |
| CAAGGAAGGTCATCGGATAG+AGG | 0.543698 | 5_2:+74681323 | Msa0788250:CDS |
| TGTTCCATGCCACTAATCCC+AGG | 0.544946 | 5_2:-74681546 | None:intergenic |
| GTCCTGCTCCAAGAGTTTCA+AGG | 0.548641 | 5_2:-74681764 | None:intergenic |
| GAAACTCTTGGAGCAGGACA+TGG | 0.552642 | 5_2:+74681768 | Msa0788250:CDS |
| TTGCTTATTGAAGCACATAA+GGG | 0.552730 | 5_2:+74679995 | Msa0788250:CDS |
| GTGGCAGATGATAAATGGAC+AGG | 0.554459 | 5_2:+74682921 | Msa0788250:CDS |
| TCGGTGCTTATTCATCAGCT+CGG | 0.554791 | 5_2:+74683291 | Msa0788250:CDS |
| ATTTCAGGGCTGTTCTTCAA+GGG | 0.556814 | 5_2:+74680104 | Msa0788250:CDS |
| TCGGATAGAGGACCCTGCCA+TGG | 0.557137 | 5_2:+74681335 | Msa0788250:CDS |
| TGGAGCAGGACATGGTGGGA+GGG | 0.557166 | 5_2:+74681776 | Msa0788250:CDS |
| TGGACCCCAATGGTGTTGAA+TGG | 0.557644 | 5_2:+74681120 | Msa0788250:CDS |
| CCTGTGAAAGAATTACCAAA+TGG | 0.557659 | 5_2:+74683146 | Msa0788250:CDS |
| GGTGTTTCTTCTGATCAAAA+GGG | 0.558333 | 5_2:+74679499 | Msa0788250:CDS |
| GACTCATTTGGTGTTCATTG+GGG | 0.558449 | 5_2:+74680347 | Msa0788250:CDS |
| GAAATATCATCAGGCATTGG+AGG | 0.559741 | 5_2:+74681812 | Msa0788250:CDS |
| GAAAAGATGACTGTAGGGGC+AGG | 0.561229 | 5_2:+74679358 | Msa0788250:exon |
| CGGATAGAGGACCCTGCCAT+GGG | 0.562030 | 5_2:+74681336 | Msa0788250:CDS |
| TTGGAGCAGGACATGGTGGG+AGG | 0.562696 | 5_2:+74681775 | Msa0788250:CDS |
| GTGGTGGATGACTCAGAGAA+TGG | 0.563083 | 5_2:+74679934 | Msa0788250:CDS |
| TGAATCACAGAACAGAGAAA+GGG | 0.563091 | 5_2:-74679303 | None:intergenic |
| ACTTCAGAGAATGTGAAAGA+AGG | 0.564462 | 5_2:+74680927 | Msa0788250:CDS |
| GCCGAGTCCATTAATTGCAA+TGG | 0.564685 | 5_2:-74681643 | None:intergenic |
| GCAGGAATATCTGTTGCTGA+TGG | 0.567325 | 5_2:+74679376 | Msa0788250:CDS |
| AAGAAGCTTGTACTTCCTGA+CGG | 0.570895 | 5_2:+74682560 | Msa0788250:CDS |
| GTTGGGGTATTCAATTGTCA+AGG | 0.578349 | 5_2:+74682795 | Msa0788250:CDS |
| GGAACAAAGAGCATTGCTGA+AGG | 0.578391 | 5_2:+74679273 | Msa0788250:five_prime_UTR |
| TGACTCCAGGAGATGAGATA+GGG | 0.578809 | 5_2:-74681590 | None:intergenic |
| TTTATAGGCATGTGTATGTG+TGG | 0.579591 | 5_2:+74681490 | Msa0788250:intron |
| CATTCATGTTCCATATCTTG+AGG | 0.580578 | 5_2:-74682758 | None:intergenic |
| GGAACATTATGAGTCAAAGA+TGG | 0.580896 | 5_2:+74681563 | Msa0788250:CDS |
| TCAAGATGTTTAATTCAGGA+GGG | 0.581133 | 5_2:+74683195 | Msa0788250:CDS |
| ATTTCAGAGTCTTCATCCGA+TGG | 0.583061 | 5_2:+74682244 | Msa0788250:intron |
| ATATGTTGAACTGGTTTGGA+TGG | 0.583851 | 5_2:+74680874 | Msa0788250:CDS |
| CGGAGAAAGAGTTATATCAA+TGG | 0.585923 | 5_2:+74683399 | Msa0788250:CDS |
| CAAGATGTTTAATTCAGGAG+GGG | 0.587768 | 5_2:+74683196 | Msa0788250:CDS |
| TTGTCATAATTGATGATGGA+TGG | 0.588951 | 5_2:+74681084 | Msa0788250:CDS |
| GACTATAGATTTGAGTGTGC+CGG | 0.590182 | 5_2:+74683379 | Msa0788250:CDS |
| GCAGCATGATATTCAGCCAT+CGG | 0.591613 | 5_2:-74682260 | None:intergenic |
| AGTCGCAGAGTCTTTCCTGT+TGG | 0.594965 | 5_2:+74679523 | Msa0788250:CDS |
| TTATGAGGAAGAATCAGGAT+TGG | 0.596231 | 5_2:+74683355 | Msa0788250:CDS |
| CATAAGGGTCGTGATATTGA+CGG | 0.598066 | 5_2:+74680010 | Msa0788250:CDS |
| TCTTCAAAAGATTGAAGTCG+TGG | 0.598479 | 5_2:-74682541 | None:intergenic |
| ATGTTTCAATGAAAGTGCGC+GGG | 0.600368 | 5_2:+74683258 | Msa0788250:CDS |
| GATTACTGTTGATTCAGAAG+AGG | 0.601348 | 5_2:+74683322 | Msa0788250:CDS |
| GAACAAAGAGCATTGCTGAA+GGG | 0.603346 | 5_2:+74679274 | Msa0788250:five_prime_UTR |
| TCAATTGTCAAGGAGCTGGT+TGG | 0.603577 | 5_2:+74682805 | Msa0788250:CDS |
| AATCACAAATTCCAGAAAGA+CGG | 0.606328 | 5_2:+74681300 | Msa0788250:CDS |
| TCACACAATTCACATTGCAT+CGG | 0.606593 | 5_2:+74682068 | Msa0788250:CDS |
| TAAACCTGGGATTAGTGGCA+TGG | 0.606597 | 5_2:+74681542 | Msa0788250:CDS |
| TGACTATTCTGGAGTTGTTG+GGG | 0.608376 | 5_2:+74682779 | Msa0788250:CDS |
| CTGTGCCTGGATTCTCGTCG+TGG | 0.608941 | 5_2:-74682854 | None:intergenic |
| ATCCTGCTAGAGATGGAAAG+AGG | 0.609009 | 5_2:+74682639 | Msa0788250:CDS |
| GAATCAACAGTAATCAACTT+CGG | 0.612554 | 5_2:-74683314 | None:intergenic |
| ATTGGGGTGGTGTTAAACCT+GGG | 0.617867 | 5_2:+74681529 | Msa0788250:CDS |
| TGCATGAGTCACAATACAGA+CGG | 0.618170 | 5_2:+74681876 | Msa0788250:CDS |
| CATTTGGTAATTCTTTCACA+GGG | 0.619704 | 5_2:-74683145 | None:intergenic |
| AATTCAAAAGGTTTCAACAG+TGG | 0.620498 | 5_2:-74679330 | None:intergenic |
| ACTCTTGGAGCAGGACATGG+TGG | 0.623127 | 5_2:+74681771 | Msa0788250:CDS |
| GCTGCTGCAAGAGCAGTTGG+AGG | 0.623143 | 5_2:+74682278 | Msa0788250:CDS |
| TGGTGGATGACTCAGAGAAT+GGG | 0.624213 | 5_2:+74679935 | Msa0788250:CDS |
| TCTGTTAGCATGGACCCCAA+TGG | 0.628808 | 5_2:+74681110 | Msa0788250:CDS |
| TGGATGGCAATCTGTTAGCA+TGG | 0.629189 | 5_2:+74681100 | Msa0788250:CDS |
| AGGGTCGTGATATTGACGGA+GGG | 0.630237 | 5_2:+74680014 | Msa0788250:CDS |
| AAGACGGCAAGGAAGGTCAT+CGG | 0.630476 | 5_2:+74681316 | Msa0788250:CDS |
| TGTGATGAATTCCCATGGCA+GGG | 0.631193 | 5_2:-74681347 | None:intergenic |
| CTCTTGGAGCAGGACATGGT+GGG | 0.631869 | 5_2:+74681772 | Msa0788250:CDS |
| AAGGAAATATCATCAGGCAT+TGG | 0.632296 | 5_2:+74681809 | Msa0788250:CDS |
| GTGGGAGGGTGAAACTTGCA+AGG | 0.634046 | 5_2:+74681790 | Msa0788250:CDS |
| GTTTCCATTCAACACCATTG+GGG | 0.635207 | 5_2:-74681124 | None:intergenic |
| ATGTTGTGTAGCGACAAGCC+CGG | 0.639558 | 5_2:+74682515 | Msa0788250:intron |
| ACAAAGATGGGAAAATATGA+CGG | 0.641050 | 5_2:-74682949 | None:intergenic |
| TCAAGAAAAGATGACTGTAG+GGG | 0.642324 | 5_2:+74679354 | Msa0788250:exon |
| TGAAGTAGTCTATCTTCCAA+AGG | 0.643888 | 5_2:+74683067 | Msa0788250:CDS |
| CAGCGGATGCTAGATATGAG+TGG | 0.644150 | 5_2:-74681707 | None:intergenic |
| CTGATGTGGAGGAATTTGAT+GGG | 0.644921 | 5_2:+74680325 | Msa0788250:CDS |
| ATGTGAAAGAAGGATTACAA+AGG | 0.646563 | 5_2:+74680937 | Msa0788250:CDS |
| AAACTTTCTCAGGATTCACA+AGG | 0.647279 | 5_2:-74681665 | None:intergenic |
| ATTGACGGAGGGGTTGACAG+TGG | 0.659836 | 5_2:+74680025 | Msa0788250:CDS |
| AAATGAGAAAGAAACAGAGA+AGG | 0.660930 | 5_2:-74679244 | None:intergenic |
| ACTCAGAGAATGGGTAACTG+TGG | 0.666426 | 5_2:+74679944 | Msa0788250:CDS |
| GATTGTAGGATGTCCTGATG+TGG | 0.668084 | 5_2:+74680311 | Msa0788250:intron |
| CACGCAATAACAGGATATTG+GGG | 0.669516 | 5_2:+74681513 | Msa0788250:CDS |
| CAAATTCCAGAAAGACGGCA+AGG | 0.669689 | 5_2:+74681305 | Msa0788250:CDS |
| AAGAGGTAACAAAACCGCGT+AGG | 0.674435 | 5_2:-74680071 | None:intergenic |
| GGGTCGTGATATTGACGGAG+GGG | 0.674757 | 5_2:+74680015 | Msa0788250:CDS |
| ACTTCCAGGAAGACCAACCA+AGG | 0.682213 | 5_2:+74682601 | Msa0788250:CDS |
| CCAAGATAGTTCTACCTACG+CGG | 0.682973 | 5_2:+74680057 | Msa0788250:CDS |
| CTGGTTTGGATGGTGTACAT+GGG | 0.686671 | 5_2:+74680884 | Msa0788250:CDS |
| TGTAGGATGTCCTGATGTGG+AGG | 0.686980 | 5_2:+74680314 | Msa0788250:intron |
| AAGGGTCGTGATATTGACGG+AGG | 0.687446 | 5_2:+74680013 | Msa0788250:CDS |
| AATGTTTCAATGAAAGTGCG+CGG | 0.689249 | 5_2:+74683257 | Msa0788250:CDS |
| TGTGAATTGTGTGAGATGCA+GGG | 0.690378 | 5_2:-74682059 | None:intergenic |
| TATCGACCATTTATCGACAG+TGG | 0.693571 | 5_2:+74682902 | Msa0788250:CDS |
| CTGGCTGCATAAATTCACCA+AGG | 0.700322 | 5_2:-74682110 | None:intergenic |
| GCAATAACAGGATATTGGGG+TGG | 0.700706 | 5_2:+74681516 | Msa0788250:CDS |
| GGTAATGTGATGAATTCCCA+TGG | 0.713393 | 5_2:-74681352 | None:intergenic |
| TTTGACACCATCAATACCAG+CGG | 0.721207 | 5_2:-74681724 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTATGTTTTTGTTTT+AGG | + | chr5_2:74679876-74679895 | Msa0788250:intron | 10.0% |
| !!! | TTTATTATGTTTTTGTTTTA+GGG | + | chr5_2:74679877-74679896 | Msa0788250:intron | 10.0% |
| !!! | TTTTTAAAGTAAAAATTTGA+TGG | + | chr5_2:74680779-74680798 | Msa0788250:intron | 10.0% |
| !! | TATTAACAAAAAAAGATTTA+AGG | - | chr5_2:74682444-74682463 | None:intergenic | 10.0% |
| !!! | TTTATAAATCAAATACTTTT+AGG | + | chr5_2:74683436-74683455 | Msa0788250:exon | 10.0% |
| !!! | TTATTATGTTTTTGTTTTAG+GGG | + | chr5_2:74679878-74679897 | Msa0788250:intron | 15.0% |
| !! | TTATGTAATTGTTAACAAAT+TGG | + | chr5_2:74680514-74680533 | Msa0788250:intron | 15.0% |
| !!! | TCTTTTCTTGAAAATTCAAA+AGG | - | chr5_2:74679345-74679364 | None:intergenic | 20.0% |
| !! | ATAAACATCAAAAACCAAAA+GGG | - | chr5_2:74679809-74679828 | None:intergenic | 20.0% |
| !! | AATAAACATCAAAAACCAAA+AGG | - | chr5_2:74679810-74679829 | None:intergenic | 20.0% |
| !!! | TATTATGTTTTTGTTTTAGG+GGG | + | chr5_2:74679879-74679898 | Msa0788250:intron | 20.0% |
| !!! | TTTTTTCAATTACTAGGATT+AGG | + | chr5_2:74680545-74680564 | Msa0788250:intron | 20.0% |
| !! | GTAAAACACAAAAATATTAG+AGG | - | chr5_2:74680830-74680849 | None:intergenic | 20.0% |
| !! | TTATTTATTTCCACTAAAAG+TGG | + | chr5_2:74680962-74680981 | Msa0788250:intron | 20.0% |
| !! | TATATTTGACAATGAAAGTT+GGG | - | chr5_2:74681181-74681200 | None:intergenic | 20.0% |
| !! | ATATATTTGACAATGAAAGT+TGG | - | chr5_2:74681182-74681201 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTTTGATTTCAT+TGG | - | chr5_2:74681376-74681395 | None:intergenic | 20.0% |
| !!! | TTATTGAATAAATCTAGAGT+AGG | - | chr5_2:74681953-74681972 | None:intergenic | 20.0% |
| !! | TCTAGATTTATTCAATAACA+AGG | + | chr5_2:74681955-74681974 | Msa0788250:intron | 20.0% |
| !! | TCATGTAAGTTGTTAAATAT+AGG | + | chr5_2:74682146-74682165 | Msa0788250:intron | 20.0% |
| !! | CTATGAACCAAAATATATTT+AGG | - | chr5_2:74682176-74682195 | None:intergenic | 20.0% |
| !! | TTAATCAAGATGTTTAATTC+AGG | + | chr5_2:74683191-74683210 | Msa0788250:CDS | 20.0% |
| !! | ATTTACAACTCCATTAAATT+CGG | - | chr5_2:74683240-74683259 | None:intergenic | 20.0% |
| !!! | TAAATCAAATACTTTTAGGT+TGG | + | chr5_2:74683440-74683459 | Msa0788250:exon | 20.0% |
| ! | TCACACAAAAAACATACAAA+AGG | - | chr5_2:74679676-74679695 | None:intergenic | 25.0% |
| ! | CTATCATCATGATAAAAACA+TGG | + | chr5_2:74679717-74679736 | Msa0788250:intron | 25.0% |
| ! | TAAACATCAAAAACCAAAAG+GGG | - | chr5_2:74679808-74679827 | None:intergenic | 25.0% |
| ! | TTTGCAAGTGTTAATATTGA+AGG | + | chr5_2:74679833-74679852 | Msa0788250:intron | 25.0% |
| !!! | CGTTTTTTGTGTTTGTAAAT+CGG | + | chr5_2:74680190-74680209 | Msa0788250:intron | 25.0% |
| !!! | GTTTTTTGTGTTTGTAAATC+GGG | + | chr5_2:74680191-74680210 | Msa0788250:intron | 25.0% |
| !!! | TTAGTTTTTACAGTTATGTG+TGG | - | chr5_2:74680223-74680242 | None:intergenic | 25.0% |
| !!! | TCTGAGTTTTTTCAATTACT+AGG | + | chr5_2:74680539-74680558 | Msa0788250:intron | 25.0% |
| !!! | TTTGAACTTTTTCTTTGTTC+AGG | + | chr5_2:74680686-74680705 | Msa0788250:intron | 25.0% |
| !! | TTACGTTATTTACAGTTTTG+AGG | + | chr5_2:74681040-74681059 | Msa0788250:intron | 25.0% |
| ! | AAGTTTGTCATAATTGATGA+TGG | + | chr5_2:74681080-74681099 | Msa0788250:CDS | 25.0% |
| !!! | TTTTCGTCGTTTTTGTTTAT+AGG | + | chr5_2:74681475-74681494 | Msa0788250:intron | 25.0% |
| ! | TTAGATACCATTGCAATTAA+TGG | + | chr5_2:74681636-74681655 | Msa0788250:CDS | 25.0% |
| ! | TAAAAGTGAAAAACTTTCTC+AGG | - | chr5_2:74681678-74681697 | None:intergenic | 25.0% |
| !! | AGGAGATCCTAAATATATTT+TGG | + | chr5_2:74682166-74682185 | Msa0788250:intron | 25.0% |
| ! | AATCATTACCTGACATAAAT+AGG | - | chr5_2:74682308-74682327 | None:intergenic | 25.0% |
| ! | AGTTAGAAGAGAATAACTTA+TGG | - | chr5_2:74682336-74682355 | None:intergenic | 25.0% |
| !!! | TATGTAATTGTTTGTTGTCT+TGG | + | chr5_2:74682366-74682385 | Msa0788250:intron | 25.0% |
| ! | TTAAAACATACCACAAAGAT+GGG | - | chr5_2:74682964-74682983 | None:intergenic | 25.0% |
| ! | TCGTAAAAACTTCATATTCT+CGG | - | chr5_2:74683121-74683140 | None:intergenic | 25.0% |
| ! | AACATCTTGATTAAACCAAT+AGG | - | chr5_2:74683185-74683204 | None:intergenic | 25.0% |
| !!! | AAATACTTTTAGGTTGGTTA+TGG | + | chr5_2:74683446-74683465 | Msa0788250:three_prime_UTR | 25.0% |
| GTTTCTTTCTCATTTGCATT+TGG | + | chr5_2:74679252-74679271 | Msa0788250:five_prime_UTR | 30.0% | |
| AATTCAAAAGGTTTCAACAG+TGG | - | chr5_2:74679333-74679352 | None:intergenic | 30.0% | |
| TTTCAAGAAAAGATGACTGT+AGG | + | chr5_2:74679352-74679371 | Msa0788250:exon | 30.0% | |
| TTCAAGAAAAGATGACTGTA+GGG | + | chr5_2:74679353-74679372 | Msa0788250:exon | 30.0% | |
| CTGTGTTTGTTTAAGGATTA+AGG | + | chr5_2:74679779-74679798 | Msa0788250:intron | 30.0% | |
| TTTGCTTATTGAAGCACATA+AGG | + | chr5_2:74679994-74680013 | Msa0788250:CDS | 30.0% | |
| TTGCTTATTGAAGCACATAA+GGG | + | chr5_2:74679995-74680014 | Msa0788250:CDS | 30.0% | |
| ATTGAGATTTGTGTTGAAAG+TGG | + | chr5_2:74680142-74680161 | Msa0788250:CDS | 30.0% | |
| ! | TATGCATTGTGAATTTTTGC+TGG | + | chr5_2:74680282-74680301 | Msa0788250:intron | 30.0% |
| ! | ATGCATTGTGAATTTTTGCT+GGG | + | chr5_2:74680283-74680302 | Msa0788250:intron | 30.0% |
| !! | GCATTTGTTATGACTTCATA+AGG | - | chr5_2:74680384-74680403 | None:intergenic | 30.0% |
| AAACAAGAACAAAGAAGAAC+TGG | - | chr5_2:74680449-74680468 | None:intergenic | 30.0% | |
| TGTTCCATTAGTTCAGTATT+AGG | + | chr5_2:74680608-74680627 | Msa0788250:intron | 30.0% | |
| AAGTCCTAATACTGAACTAA+TGG | - | chr5_2:74680615-74680634 | None:intergenic | 30.0% | |
| AAAGTTCATCACTGCAAATT+AGG | - | chr5_2:74680666-74680685 | None:intergenic | 30.0% | |
| GGCATCTGAATAATACAAAT+AGG | - | chr5_2:74680852-74680871 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGGATTACAA+AGG | + | chr5_2:74680937-74680956 | Msa0788250:CDS | 30.0% | |
| !!! | GTTATTTACAGTTTTGAGGA+AGG | + | chr5_2:74681044-74681063 | Msa0788250:intron | 30.0% |
| TCAATTATGACAAACTTAGC+AGG | - | chr5_2:74681077-74681096 | None:intergenic | 30.0% | |
| !! | TTGTCATAATTGATGATGGA+TGG | + | chr5_2:74681084-74681103 | Msa0788250:CDS | 30.0% |
| TTCGTCATTGTAAAAATGCA+TGG | - | chr5_2:74681212-74681231 | None:intergenic | 30.0% | |
| AATCACAAATTCCAGAAAGA+CGG | + | chr5_2:74681300-74681319 | Msa0788250:CDS | 30.0% | |
| AAACGACGAAAAATTTGCAA+CGG | - | chr5_2:74681467-74681486 | None:intergenic | 30.0% | |
| ! | GCTTACAATACTATTTTCCT+TGG | + | chr5_2:74682093-74682112 | Msa0788250:CDS | 30.0% |
| CACAACATTACAAAATCAGA+AGG | - | chr5_2:74682503-74682522 | None:intergenic | 30.0% | |
| ATATTAAGAGCTAAACTTCC+AGG | + | chr5_2:74682587-74682606 | Msa0788250:CDS | 30.0% | |
| ATCAGAAAATAAGCAATCCT+TGG | - | chr5_2:74682621-74682640 | None:intergenic | 30.0% | |
| CTTGTCAAGTAAGTAAAGTT+AGG | - | chr5_2:74682690-74682709 | None:intergenic | 30.0% | |
| ACAAAGATGGGAAAATATGA+CGG | - | chr5_2:74682952-74682971 | None:intergenic | 30.0% | |
| CTTAAAACATACCACAAAGA+TGG | - | chr5_2:74682965-74682984 | None:intergenic | 30.0% | |
| ! | CATCTTTGTGGTATGTTTTA+AGG | + | chr5_2:74682963-74682982 | Msa0788250:intron | 30.0% |
| TTTACATCACACTCCTAAAA+AGG | + | chr5_2:74682987-74683006 | Msa0788250:intron | 30.0% | |
| CAATTATACACAAGAAAAGC+TGG | - | chr5_2:74683018-74683037 | None:intergenic | 30.0% | |
| TGTTTATGATGTTTGTTTGC+AGG | + | chr5_2:74683044-74683063 | Msa0788250:intron | 30.0% | |
| ATTGGAATAGAAACATCCTT+TGG | - | chr5_2:74683086-74683105 | None:intergenic | 30.0% | |
| CGTAAAAACTTCATATTCTC+GGG | - | chr5_2:74683120-74683139 | None:intergenic | 30.0% | |
| ! | CATTTGGTAATTCTTTCACA+GGG | - | chr5_2:74683148-74683167 | None:intergenic | 30.0% |
| TAAACCAATAGGAGCAAATT+TGG | - | chr5_2:74683174-74683193 | None:intergenic | 30.0% | |
| ATCAAGATGTTTAATTCAGG+AGG | + | chr5_2:74683194-74683213 | Msa0788250:CDS | 30.0% | |
| TCAAGATGTTTAATTCAGGA+GGG | + | chr5_2:74683195-74683214 | Msa0788250:CDS | 30.0% | |
| ! | GAGTTTAGTTCCGAATTTAA+TGG | + | chr5_2:74683227-74683246 | Msa0788250:CDS | 30.0% |
| GAATCAACAGTAATCAACTT+CGG | - | chr5_2:74683317-74683336 | None:intergenic | 30.0% | |
| CATTGATATAACTCTTTCTC+CGG | - | chr5_2:74683401-74683420 | None:intergenic | 30.0% | |
| TGAATCACAGAACAGAGAAA+GGG | - | chr5_2:74679306-74679325 | None:intergenic | 35.0% | |
| ATGAATCACAGAACAGAGAA+AGG | - | chr5_2:74679307-74679326 | None:intergenic | 35.0% | |
| TCAAGAAAAGATGACTGTAG+GGG | + | chr5_2:74679354-74679373 | Msa0788250:exon | 35.0% | |
| !! | ATGGAAACTTGATGGTGTTA+GGG | + | chr5_2:74679395-74679414 | Msa0788250:CDS | 35.0% |
| TTGATCAATGGTGCATTTCT+TGG | + | chr5_2:74679478-74679497 | Msa0788250:CDS | 35.0% | |
| TGGTGTTTCTTCTGATCAAA+AGG | + | chr5_2:74679498-74679517 | Msa0788250:CDS | 35.0% | |
| GGTGTTTCTTCTGATCAAAA+GGG | + | chr5_2:74679499-74679518 | Msa0788250:CDS | 35.0% | |
| GTTGACACTGTGTTTGTTTA+AGG | + | chr5_2:74679772-74679791 | Msa0788250:intron | 35.0% | |
| AGCAAAAACTGTGTCTCAAA+GGG | - | chr5_2:74679980-74679999 | None:intergenic | 35.0% | |
| AAGCAAAAACTGTGTCTCAA+AGG | - | chr5_2:74679981-74680000 | None:intergenic | 35.0% | |
| !! | GTTTTGTTACCTCTTTTGGA+AGG | + | chr5_2:74680079-74680098 | Msa0788250:CDS | 35.0% |
| !! | TCTTTTGGAAGGAGATTTCA+GGG | + | chr5_2:74680090-74680109 | Msa0788250:CDS | 35.0% |
| ! | GTTTTTACAGTTATGTGTGG+AGG | - | chr5_2:74680220-74680239 | None:intergenic | 35.0% |
| AGAAGAACTGGAAAGTGAAA+AGG | - | chr5_2:74680437-74680456 | None:intergenic | 35.0% | |
| TGCGAAATTTACATCACTGA+TGG | + | chr5_2:74680477-74680496 | Msa0788250:intron | 35.0% | |
| ATGAACTTTAAGCTGCAACA+AGG | - | chr5_2:74680805-74680824 | None:intergenic | 35.0% | |
| !! | ATATGTTGAACTGGTTTGGA+TGG | + | chr5_2:74680874-74680893 | Msa0788250:CDS | 35.0% |
| ACTTCAGAGAATGTGAAAGA+AGG | + | chr5_2:74680927-74680946 | Msa0788250:CDS | 35.0% | |
| !! | GTAACTTAGACCACTTTTAG+TGG | - | chr5_2:74680975-74680994 | None:intergenic | 35.0% |
| !!! | ATTTACAGTTTTGAGGAAGG+TGG | + | chr5_2:74681047-74681066 | Msa0788250:intron | 35.0% |
| TGTTTCCATTCAACACCATT+GGG | - | chr5_2:74681128-74681147 | None:intergenic | 35.0% | |
| ATGTTTCCATTCAACACCAT+TGG | - | chr5_2:74681129-74681148 | None:intergenic | 35.0% | |
| TTTATAGGCATGTGTATGTG+TGG | + | chr5_2:74681490-74681509 | Msa0788250:intron | 35.0% | |
| GGAACATTATGAGTCAAAGA+TGG | + | chr5_2:74681563-74681582 | Msa0788250:CDS | 35.0% | |
| TATCTAATGCTTCATCTGGT+TGG | - | chr5_2:74681623-74681642 | None:intergenic | 35.0% | |
| ATGGTATCTAATGCTTCATC+TGG | - | chr5_2:74681627-74681646 | None:intergenic | 35.0% | |
| !! | ACCATTGCAATTAATGGACT+CGG | + | chr5_2:74681642-74681661 | Msa0788250:CDS | 35.0% |
| AAACTTTCTCAGGATTCACA+AGG | - | chr5_2:74681668-74681687 | None:intergenic | 35.0% | |
| CAGAATATCCTTGAAACTCT+TGG | + | chr5_2:74681756-74681775 | Msa0788250:CDS | 35.0% | |
| ACTTGCAAGGAAATATCATC+AGG | + | chr5_2:74681803-74681822 | Msa0788250:CDS | 35.0% | |
| AAGGAAATATCATCAGGCAT+TGG | + | chr5_2:74681809-74681828 | Msa0788250:CDS | 35.0% | |
| TCTAGGAACTTTCCTGATAA+CGG | + | chr5_2:74681843-74681862 | Msa0788250:CDS | 35.0% | |
| CAACAAATGATTCCGTTATC+AGG | - | chr5_2:74681858-74681877 | None:intergenic | 35.0% | |
| !! | ACAATACAGACGGATTGTAT+AGG | + | chr5_2:74681886-74681905 | Msa0788250:CDS | 35.0% |
| TTAGAGCTTCAGATGATTTC+TGG | + | chr5_2:74682028-74682047 | Msa0788250:CDS | 35.0% | |
| TCACACAATTCACATTGCAT+CGG | + | chr5_2:74682068-74682087 | Msa0788250:CDS | 35.0% | |
| TGAATTTATGCAGCCAGATT+GGG | + | chr5_2:74682116-74682135 | Msa0788250:CDS | 35.0% | |
| ACATGAAACATATCCCAATC+TGG | - | chr5_2:74682132-74682151 | None:intergenic | 35.0% | |
| TGGTTCATAGAAAATGTGCT+AGG | + | chr5_2:74682186-74682205 | Msa0788250:intron | 35.0% | |
| AGAAAATGTGCTAGGATTTC+AGG | + | chr5_2:74682194-74682213 | Msa0788250:intron | 35.0% | |
| TCTTCAAAAGATTGAAGTCG+TGG | - | chr5_2:74682544-74682563 | None:intergenic | 35.0% | |
| GAAAATAAGCAATCCTTGGT+TGG | - | chr5_2:74682617-74682636 | None:intergenic | 35.0% | |
| CATTCATGTTCCATATCTTG+AGG | - | chr5_2:74682761-74682780 | None:intergenic | 35.0% | |
| TGGAACATGAATGACTATTC+TGG | + | chr5_2:74682768-74682787 | Msa0788250:CDS | 35.0% | |
| !! | AATGACTATTCTGGAGTTGT+TGG | + | chr5_2:74682777-74682796 | Msa0788250:CDS | 35.0% |
| !! | ATGACTATTCTGGAGTTGTT+GGG | + | chr5_2:74682778-74682797 | Msa0788250:CDS | 35.0% |
| ! | GTCATATTTTCCCATCTTTG+TGG | + | chr5_2:74682951-74682970 | Msa0788250:CDS | 35.0% |
| ! | AAAGCTGGTGTAACCTTTTT+AGG | - | chr5_2:74683003-74683022 | None:intergenic | 35.0% |
| TGAAGTAGTCTATCTTCCAA+AGG | + | chr5_2:74683067-74683086 | Msa0788250:CDS | 35.0% | |
| TTCATATTCTCGGGATTTCA+TGG | - | chr5_2:74683111-74683130 | None:intergenic | 35.0% | |
| ! | CCATTTGGTAATTCTTTCAC+AGG | - | chr5_2:74683149-74683168 | None:intergenic | 35.0% |
| CCTGTGAAAGAATTACCAAA+TGG | + | chr5_2:74683146-74683165 | Msa0788250:CDS | 35.0% | |
| CAAGATGTTTAATTCAGGAG+GGG | + | chr5_2:74683196-74683215 | Msa0788250:CDS | 35.0% | |
| ! | AATGTTTCAATGAAAGTGCG+CGG | + | chr5_2:74683257-74683276 | Msa0788250:CDS | 35.0% |
| !! | GATTACTGTTGATTCAGAAG+AGG | + | chr5_2:74683322-74683341 | Msa0788250:CDS | 35.0% |
| TTCAGTTATGAGGAAGAATC+AGG | + | chr5_2:74683350-74683369 | Msa0788250:CDS | 35.0% | |
| TTATGAGGAAGAATCAGGAT+TGG | + | chr5_2:74683355-74683374 | Msa0788250:CDS | 35.0% | |
| CGGAGAAAGAGTTATATCAA+TGG | + | chr5_2:74683399-74683418 | Msa0788250:CDS | 35.0% | |
| !! | GAACAAAGAGCATTGCTGAA+GGG | + | chr5_2:74679274-74679293 | Msa0788250:five_prime_UTR | 40.0% |
| TGTTGCTGATGGAAACTTGA+TGG | + | chr5_2:74679387-74679406 | Msa0788250:CDS | 40.0% | |
| !! | GATGGAAACTTGATGGTGTT+AGG | + | chr5_2:74679394-74679413 | Msa0788250:CDS | 40.0% |
| TCTGGTGGTTCTTTGATCAA+TGG | + | chr5_2:74679466-74679485 | Msa0788250:CDS | 40.0% | |
| ! | GTCTTTTCCGCTTCAAAATG+TGG | + | chr5_2:74679915-74679934 | Msa0788250:CDS | 40.0% |
| ! | TTTTCCGCTTCAAAATGTGG+TGG | + | chr5_2:74679918-74679937 | Msa0788250:CDS | 40.0% |
| !! | TCATCCACCACATTTTGAAG+CGG | - | chr5_2:74679925-74679944 | None:intergenic | 40.0% |
| GCAAAAACTGTGTCTCAAAG+GGG | - | chr5_2:74679979-74679998 | None:intergenic | 40.0% | |
| CATAAGGGTCGTGATATTGA+CGG | + | chr5_2:74680010-74680029 | Msa0788250:CDS | 40.0% | |
| CTGAAATCTCCTTCCAAAAG+AGG | - | chr5_2:74680091-74680110 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGAAGGAGATTTC+AGG | + | chr5_2:74680089-74680108 | Msa0788250:CDS | 40.0% |
| ATTTCAGGGCTGTTCTTCAA+GGG | + | chr5_2:74680104-74680123 | Msa0788250:CDS | 40.0% | |
| CTGATGTGGAGGAATTTGAT+GGG | + | chr5_2:74680325-74680344 | Msa0788250:CDS | 40.0% | |
| GGAATTTGATGGGACTCATT+TGG | + | chr5_2:74680335-74680354 | Msa0788250:CDS | 40.0% | |
| !! | GGACTCATTTGGTGTTCATT+GGG | + | chr5_2:74680346-74680365 | Msa0788250:CDS | 40.0% |
| !! | GACTCATTTGGTGTTCATTG+GGG | + | chr5_2:74680347-74680366 | Msa0788250:CDS | 40.0% |
| AGATGCCAGATATGTTGAAC+TGG | + | chr5_2:74680865-74680884 | Msa0788250:intron | 40.0% | |
| CCAAACCAGTTCAACATATC+TGG | - | chr5_2:74680873-74680892 | None:intergenic | 40.0% | |
| CCAGATATGTTGAACTGGTT+TGG | + | chr5_2:74680870-74680889 | Msa0788250:CDS | 40.0% | |
| !! | CACATTCTCTGAAGTGACAT+TGG | - | chr5_2:74680922-74680941 | None:intergenic | 40.0% |
| GTTTCCATTCAACACCATTG+GGG | - | chr5_2:74681127-74681146 | None:intergenic | 40.0% | |
| GGTAATGTGATGAATTCCCA+TGG | - | chr5_2:74681355-74681374 | None:intergenic | 40.0% | |
| GCACGCAATAACAGGATATT+GGG | + | chr5_2:74681512-74681531 | Msa0788250:CDS | 40.0% | |
| CACGCAATAACAGGATATTG+GGG | + | chr5_2:74681513-74681532 | Msa0788250:CDS | 40.0% | |
| TAATGCTTCATCTGGTTGGT+TGG | - | chr5_2:74681619-74681638 | None:intergenic | 40.0% | |
| TTTGACACCATCAATACCAG+CGG | - | chr5_2:74681727-74681746 | None:intergenic | 40.0% | |
| !! | GAAATATCATCAGGCATTGG+AGG | + | chr5_2:74681812-74681831 | Msa0788250:CDS | 40.0% |
| TGCATGAGTCACAATACAGA+CGG | + | chr5_2:74681876-74681895 | Msa0788250:CDS | 40.0% | |
| !! | TACAGACGGATTGTATAGGT+AGG | + | chr5_2:74681890-74681909 | Msa0788250:intron | 40.0% |
| ! | TTGATGCAGTTCAAAGCGTT+CGG | + | chr5_2:74681999-74682018 | Msa0788250:intron | 40.0% |
| TGTGAATTGTGTGAGATGCA+GGG | - | chr5_2:74682062-74682081 | None:intergenic | 40.0% | |
| ATGTGAATTGTGTGAGATGC+AGG | - | chr5_2:74682063-74682082 | None:intergenic | 40.0% | |
| GTGAATTTATGCAGCCAGAT+TGG | + | chr5_2:74682115-74682134 | Msa0788250:CDS | 40.0% | |
| ATTTCAGAGTCTTCATCCGA+TGG | + | chr5_2:74682244-74682263 | Msa0788250:intron | 40.0% | |
| GAGGATGTCCTATTTATGTC+AGG | + | chr5_2:74682297-74682316 | Msa0788250:CDS | 40.0% | |
| AAGAAGCTTGTACTTCCTGA+CGG | + | chr5_2:74682560-74682579 | Msa0788250:CDS | 40.0% | |
| GCTCTTAATATAGAACCGTC+AGG | - | chr5_2:74682578-74682597 | None:intergenic | 40.0% | |
| ! | TTTTCTGATCCTGCTAGAGA+TGG | + | chr5_2:74682632-74682651 | Msa0788250:CDS | 40.0% |
| ! | ATCAGCTTGTTCTTTGCTCA+TGG | + | chr5_2:74682717-74682736 | Msa0788250:intron | 40.0% |
| ATTGCAGTCTCCTCAAGATA+TGG | + | chr5_2:74682748-74682767 | Msa0788250:intron | 40.0% | |
| !! | TGACTATTCTGGAGTTGTTG+GGG | + | chr5_2:74682779-74682798 | Msa0788250:CDS | 40.0% |
| ! | GTTGGGGTATTCAATTGTCA+AGG | + | chr5_2:74682795-74682814 | Msa0788250:CDS | 40.0% |
| GTATTCAATTGTCAAGGAGC+TGG | + | chr5_2:74682801-74682820 | Msa0788250:CDS | 40.0% | |
| CACAGTCACTGACATCATTA+GGG | + | chr5_2:74682872-74682891 | Msa0788250:CDS | 40.0% | |
| TATCGACCATTTATCGACAG+TGG | + | chr5_2:74682902-74682921 | Msa0788250:CDS | 40.0% | |
| TCTCGGGATTTCATGGTAAT+TGG | - | chr5_2:74683104-74683123 | None:intergenic | 40.0% | |
| ! | ATGTTTCAATGAAAGTGCGC+GGG | + | chr5_2:74683258-74683277 | Msa0788250:CDS | 40.0% |
| !! | CTGATGAATAAGCACCGAAA+AGG | - | chr5_2:74683289-74683308 | None:intergenic | 40.0% |
| !! | TACTGTTGATTCAGAAGAGG+TGG | + | chr5_2:74683325-74683344 | Msa0788250:CDS | 40.0% |
| AGAGGTGGAATTCAGTTATG+AGG | + | chr5_2:74683340-74683359 | Msa0788250:CDS | 40.0% | |
| GACTATAGATTTGAGTGTGC+CGG | + | chr5_2:74683379-74683398 | Msa0788250:CDS | 40.0% | |
| !! | GGAACAAAGAGCATTGCTGA+AGG | + | chr5_2:74679273-74679292 | Msa0788250:five_prime_UTR | 45.0% |
| GCAGGAATATCTGTTGCTGA+TGG | + | chr5_2:74679376-74679395 | Msa0788250:CDS | 45.0% | |
| !! | CTTGATGGTGTTAGGGAAGA+AGG | + | chr5_2:74679402-74679421 | Msa0788250:CDS | 45.0% |
| GTTCTTGTTACTCCTGCTTC+TGG | + | chr5_2:74679448-74679467 | Msa0788250:CDS | 45.0% | |
| ATCAAAGAACCACCAGAAGC+AGG | - | chr5_2:74679463-74679482 | None:intergenic | 45.0% | |
| ACATACTCAAGCTTGCCAAC+AGG | - | chr5_2:74679541-74679560 | None:intergenic | 45.0% | |
| ! | AGGATTAAGGTGACCCCTTT+TGG | + | chr5_2:74679792-74679811 | Msa0788250:intron | 45.0% |
| ! | TGGTGGATGACTCAGAGAAT+GGG | + | chr5_2:74679935-74679954 | Msa0788250:CDS | 45.0% |
| ACTCAGAGAATGGGTAACTG+TGG | + | chr5_2:74679944-74679963 | Msa0788250:CDS | 45.0% | |
| ! | CCAAGATAGTTCTACCTACG+CGG | + | chr5_2:74680057-74680076 | Msa0788250:CDS | 45.0% |
| AAGAGGTAACAAAACCGCGT+AGG | - | chr5_2:74680074-74680093 | None:intergenic | 45.0% | |
| !!! | CGCGGTTTTGTTACCTCTTT+TGG | + | chr5_2:74680075-74680094 | Msa0788250:CDS | 45.0% |
| GATTTCAGGGCTGTTCTTCA+AGG | + | chr5_2:74680103-74680122 | Msa0788250:CDS | 45.0% | |
| ! | ACTAAACCATCGAGTTGCCT+AGG | + | chr5_2:74680238-74680257 | Msa0788250:intron | 45.0% |
| TTTGCTGGGTGCATGATTGT+AGG | + | chr5_2:74680297-74680316 | Msa0788250:intron | 45.0% | |
| GATTGTAGGATGTCCTGATG+TGG | + | chr5_2:74680311-74680330 | Msa0788250:intron | 45.0% | |
| CCATCAAATTCCTCCACATC+AGG | - | chr5_2:74680327-74680346 | None:intergenic | 45.0% | |
| CCTGATGTGGAGGAATTTGA+TGG | + | chr5_2:74680324-74680343 | Msa0788250:CDS | 45.0% | |
| !! | GGGACTCATTTGGTGTTCAT+TGG | + | chr5_2:74680345-74680364 | Msa0788250:CDS | 45.0% |
| TTGTCATCGCGAGAGAAAGA+AGG | + | chr5_2:74680735-74680754 | Msa0788250:CDS | 45.0% | |
| !! | ACTGGTTTGGATGGTGTACA+TGG | + | chr5_2:74680883-74680902 | Msa0788250:CDS | 45.0% |
| !! | CTGGTTTGGATGGTGTACAT+GGG | + | chr5_2:74680884-74680903 | Msa0788250:CDS | 45.0% |
| TGGATGGCAATCTGTTAGCA+TGG | + | chr5_2:74681100-74681119 | Msa0788250:CDS | 45.0% | |
| CAAATTCCAGAAAGACGGCA+AGG | + | chr5_2:74681305-74681324 | Msa0788250:CDS | 45.0% | |
| TGTGATGAATTCCCATGGCA+GGG | - | chr5_2:74681350-74681369 | None:intergenic | 45.0% | |
| ATGTGATGAATTCCCATGGC+AGG | - | chr5_2:74681351-74681370 | None:intergenic | 45.0% | |
| TATGTGTGGCACGCAATAAC+AGG | + | chr5_2:74681504-74681523 | Msa0788250:CDS | 45.0% | |
| GGCACGCAATAACAGGATAT+TGG | + | chr5_2:74681511-74681530 | Msa0788250:CDS | 45.0% | |
| GCAATAACAGGATATTGGGG+TGG | + | chr5_2:74681516-74681535 | Msa0788250:CDS | 45.0% | |
| ! | TATTGGGGTGGTGTTAAACC+TGG | + | chr5_2:74681528-74681547 | Msa0788250:CDS | 45.0% |
| ! | ATTGGGGTGGTGTTAAACCT+GGG | + | chr5_2:74681529-74681548 | Msa0788250:CDS | 45.0% |
| GGTGTTAAACCTGGGATTAG+TGG | + | chr5_2:74681537-74681556 | Msa0788250:CDS | 45.0% | |
| ! | TAAACCTGGGATTAGTGGCA+TGG | + | chr5_2:74681542-74681561 | Msa0788250:CDS | 45.0% |
| TGACTCCAGGAGATGAGATA+GGG | - | chr5_2:74681593-74681612 | None:intergenic | 45.0% | |
| TTGACTCCAGGAGATGAGAT+AGG | - | chr5_2:74681594-74681613 | None:intergenic | 45.0% | |
| GCCGAGTCCATTAATTGCAA+TGG | - | chr5_2:74681646-74681665 | None:intergenic | 45.0% | |
| ATCCTTGAAACTCTTGGAGC+AGG | + | chr5_2:74681762-74681781 | Msa0788250:CDS | 45.0% | |
| CTGGCTGCATAAATTCACCA+AGG | - | chr5_2:74682113-74682132 | None:intergenic | 45.0% | |
| GCAGCATGATATTCAGCCAT+CGG | - | chr5_2:74682263-74682282 | None:intergenic | 45.0% | |
| AAGATTGAAGTCGTGGTGTC+CGG | - | chr5_2:74682537-74682556 | None:intergenic | 45.0% | |
| ATCCTGCTAGAGATGGAAAG+AGG | + | chr5_2:74682639-74682658 | Msa0788250:CDS | 45.0% | |
| TACCTCTTTCCATCTCTAGC+AGG | - | chr5_2:74682644-74682663 | None:intergenic | 45.0% | |
| TCAATTGTCAAGGAGCTGGT+TGG | + | chr5_2:74682805-74682824 | Msa0788250:CDS | 45.0% | |
| GCACAGTCACTGACATCATT+AGG | + | chr5_2:74682871-74682890 | Msa0788250:CDS | 45.0% | |
| CATCTGCCACTGTCGATAAA+TGG | - | chr5_2:74682911-74682930 | None:intergenic | 45.0% | |
| CGACAGTGGCAGATGATAAA+TGG | + | chr5_2:74682916-74682935 | Msa0788250:CDS | 45.0% | |
| GTGGCAGATGATAAATGGAC+AGG | + | chr5_2:74682921-74682940 | Msa0788250:CDS | 45.0% | |
| GGAGCAAATTTGGCACCATT+TGG | - | chr5_2:74683164-74683183 | None:intergenic | 45.0% | |
| ! | GGTGCCAAATTTGCTCCTAT+TGG | + | chr5_2:74683167-74683186 | Msa0788250:CDS | 45.0% |
| ! | TCGGTGCTTATTCATCAGCT+CGG | + | chr5_2:74683291-74683310 | Msa0788250:CDS | 45.0% |
| GAAAAGATGACTGTAGGGGC+AGG | + | chr5_2:74679358-74679377 | Msa0788250:exon | 50.0% | |
| !! | AGGGAAGAAGGTTCTGAGTC+AGG | + | chr5_2:74679414-74679433 | Msa0788250:CDS | 50.0% |
| CTTGTTACTCCTGCTTCTGG+TGG | + | chr5_2:74679451-74679470 | Msa0788250:CDS | 50.0% | |
| AGTCGCAGAGTCTTTCCTGT+TGG | + | chr5_2:74679523-74679542 | Msa0788250:CDS | 50.0% | |
| !! | GTGGTGGATGACTCAGAGAA+TGG | + | chr5_2:74679934-74679953 | Msa0788250:CDS | 50.0% |
| AAGGGTCGTGATATTGACGG+AGG | + | chr5_2:74680013-74680032 | Msa0788250:CDS | 50.0% | |
| AGGGTCGTGATATTGACGGA+GGG | + | chr5_2:74680014-74680033 | Msa0788250:CDS | 50.0% | |
| CCGCGTAGGTAGAACTATCT+TGG | - | chr5_2:74680060-74680079 | None:intergenic | 50.0% | |
| TGTGATCCTAGGCAACTCGA+TGG | - | chr5_2:74680247-74680266 | None:intergenic | 50.0% | |
| AGTCTCAGCACTGTGATCCT+AGG | - | chr5_2:74680258-74680277 | None:intergenic | 50.0% | |
| TGTAGGATGTCCTGATGTGG+AGG | + | chr5_2:74680314-74680333 | Msa0788250:intron | 50.0% | |
| !! | CATTTGGTGTTCATTGGGGC+TGG | + | chr5_2:74680351-74680370 | Msa0788250:CDS | 50.0% |
| TCTGTTAGCATGGACCCCAA+TGG | + | chr5_2:74681110-74681129 | Msa0788250:CDS | 50.0% | |
| ! | TGGACCCCAATGGTGTTGAA+TGG | + | chr5_2:74681120-74681139 | Msa0788250:CDS | 50.0% |
| TTCCAGAAAGACGGCAAGGA+AGG | + | chr5_2:74681309-74681328 | Msa0788250:CDS | 50.0% | |
| AAGACGGCAAGGAAGGTCAT+CGG | + | chr5_2:74681316-74681335 | Msa0788250:CDS | 50.0% | |
| CAAGGAAGGTCATCGGATAG+AGG | + | chr5_2:74681323-74681342 | Msa0788250:CDS | 50.0% | |
| TGTTCCATGCCACTAATCCC+AGG | - | chr5_2:74681549-74681568 | None:intergenic | 50.0% | |
| GCTTTCCCTATCTCATCTCC+TGG | + | chr5_2:74681585-74681604 | Msa0788250:CDS | 50.0% | |
| CAGCGGATGCTAGATATGAG+TGG | - | chr5_2:74681710-74681729 | None:intergenic | 50.0% | |
| CACTCATATCTAGCATCCGC+TGG | + | chr5_2:74681708-74681727 | Msa0788250:CDS | 50.0% | |
| ! | CTAGCATCCGCTGGTATTGA+TGG | + | chr5_2:74681717-74681736 | Msa0788250:CDS | 50.0% |
| GTCCTGCTCCAAGAGTTTCA+AGG | - | chr5_2:74681767-74681786 | None:intergenic | 50.0% | |
| GAAACTCTTGGAGCAGGACA+TGG | + | chr5_2:74681768-74681787 | Msa0788250:CDS | 50.0% | |
| !! | CATTGGAGGCATCGATCTCT+AGG | + | chr5_2:74681826-74681845 | Msa0788250:CDS | 50.0% |
| ATGTTGTGTAGCGACAAGCC+CGG | + | chr5_2:74682515-74682534 | Msa0788250:intron | 50.0% | |
| AGATTGAAGTCGTGGTGTCC+GGG | - | chr5_2:74682536-74682555 | None:intergenic | 50.0% | |
| ACTTCCAGGAAGACCAACCA+AGG | + | chr5_2:74682601-74682620 | Msa0788250:CDS | 50.0% | |
| !! | CAATCCTTGGTTGGTCTTCC+TGG | - | chr5_2:74682608-74682627 | None:intergenic | 50.0% |
| CTGGATTCTCGTCGTGGATA+AGG | - | chr5_2:74682851-74682870 | None:intergenic | 50.0% | |
| CTTATCCACGACGAGAATCC+AGG | + | chr5_2:74682849-74682868 | Msa0788250:CDS | 50.0% | |
| ATGATGTCAGTGACTGTGCC+TGG | - | chr5_2:74682870-74682889 | None:intergenic | 50.0% | |
| GGGTCGTGATATTGACGGAG+GGG | + | chr5_2:74680015-74680034 | Msa0788250:CDS | 55.0% | |
| ATTGACGGAGGGGTTGACAG+TGG | + | chr5_2:74680025-74680044 | Msa0788250:CDS | 55.0% | |
| GACCTTCCTTGCCGTCTTTC+TGG | - | chr5_2:74681314-74681333 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGGACTTGACTCC+AGG | - | chr5_2:74681606-74681625 | None:intergenic | 55.0% |
| ACTCTTGGAGCAGGACATGG+TGG | + | chr5_2:74681771-74681790 | Msa0788250:CDS | 55.0% | |
| CTCTTGGAGCAGGACATGGT+GGG | + | chr5_2:74681772-74681791 | Msa0788250:CDS | 55.0% | |
| GTGGGAGGGTGAAACTTGCA+AGG | + | chr5_2:74681790-74681809 | Msa0788250:CDS | 55.0% | |
| GTGTGAGATGCAGGGTCTCT+TGG | - | chr5_2:74682054-74682073 | None:intergenic | 55.0% | |
| CATGCTGCTGCAAGAGCAGT+TGG | + | chr5_2:74682275-74682294 | Msa0788250:CDS | 55.0% | |
| ! | GGAGCTGGTTGGTGCAAAGT+TGG | + | chr5_2:74682816-74682835 | Msa0788250:CDS | 55.0% |
| ! | TCAATGAAAGTGCGCGGGTG+TGG | + | chr5_2:74683263-74683282 | Msa0788250:CDS | 55.0% |
| TCGGATAGAGGACCCTGCCA+TGG | + | chr5_2:74681335-74681354 | Msa0788250:CDS | 60.0% | |
| CGGATAGAGGACCCTGCCAT+GGG | + | chr5_2:74681336-74681355 | Msa0788250:CDS | 60.0% | |
| ! | TTGGAGCAGGACATGGTGGG+AGG | + | chr5_2:74681775-74681794 | Msa0788250:CDS | 60.0% |
| ! | TGGAGCAGGACATGGTGGGA+GGG | + | chr5_2:74681776-74681795 | Msa0788250:CDS | 60.0% |
| GCTGCTGCAAGAGCAGTTGG+AGG | + | chr5_2:74682278-74682297 | Msa0788250:CDS | 60.0% | |
| CTGTGCCTGGATTCTCGTCG+TGG | - | chr5_2:74682857-74682876 | None:intergenic | 60.0% | |
| ! | GTGCGCGGGTGTGGCCTTTT+CGG | + | chr5_2:74683272-74683291 | Msa0788250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 74679245 | 74683501 | 74679245 | ID=Msa0788250;Name=Msa0788250 |
| chr5_2 | mRNA | 74679245 | 74683501 | 74679245 | ID=Msa0788250-mRNA-1;Parent=Msa0788250;Name=Msa0788250-mRNA-1;_AED=0.12;_eAED=0.12;_QI=119|1|1|1|1|1|13|59|760 |
| chr5_2 | exon | 74679245 | 74679554 | 74679245 | ID=Msa0788250-mRNA-1:exon:22816;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74679898 | 74680163 | 74679898 | ID=Msa0788250-mRNA-1:exon:22817;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74680319 | 74680409 | 74680319 | ID=Msa0788250-mRNA-1:exon:22818;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74680708 | 74680756 | 74680708 | ID=Msa0788250-mRNA-1:exon:22819;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74680867 | 74680958 | 74680867 | ID=Msa0788250-mRNA-1:exon:22820;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74681055 | 74681162 | 74681055 | ID=Msa0788250-mRNA-1:exon:22821;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74681269 | 74681403 | 74681269 | ID=Msa0788250-mRNA-1:exon:22822;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74681497 | 74681907 | 74681497 | ID=Msa0788250-mRNA-1:exon:22823;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74682008 | 74682149 | 74682008 | ID=Msa0788250-mRNA-1:exon:22824;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74682251 | 74682318 | 74682251 | ID=Msa0788250-mRNA-1:exon:22825;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74682526 | 74682660 | 74682526 | ID=Msa0788250-mRNA-1:exon:22826;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74682755 | 74682972 | 74682755 | ID=Msa0788250-mRNA-1:exon:22827;Parent=Msa0788250-mRNA-1 |
| chr5_2 | exon | 74683066 | 74683501 | 74683066 | ID=Msa0788250-mRNA-1:exon:22828;Parent=Msa0788250-mRNA-1 |
| chr5_2 | five_prime_UTR | 74679245 | 74679363 | 74679245 | ID=Msa0788250-mRNA-1:five_prime_utr;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74679364 | 74679554 | 74679364 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74679898 | 74680163 | 74679898 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74680319 | 74680409 | 74680319 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74680708 | 74680756 | 74680708 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74680867 | 74680958 | 74680867 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74681055 | 74681162 | 74681055 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74681269 | 74681403 | 74681269 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74681497 | 74681907 | 74681497 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74682008 | 74682149 | 74682008 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74682251 | 74682318 | 74682251 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74682526 | 74682660 | 74682526 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74682755 | 74682972 | 74682755 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | CDS | 74683066 | 74683442 | 74683066 | ID=Msa0788250-mRNA-1:cds;Parent=Msa0788250-mRNA-1 |
| chr5_2 | three_prime_UTR | 74683443 | 74683501 | 74683443 | ID=Msa0788250-mRNA-1:three_prime_utr;Parent=Msa0788250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
