Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401820 | XP_024639978.1 | 97.105 | 760 | 22 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401820 | sp|Q84VX0|RFS1_ARATH | 71.711 | 760 | 206 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401820 | G7K4U6 | 97.105 | 760 | 22 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0788250 | Msa1401820 | 0.957689 | 1.479344e-115 | -8.615850e-47 |
| Msa0825420 | Msa1401820 | 0.891805 | 2.839588e-74 | -8.615850e-47 |
| Msa0404870 | Msa1401820 | -0.804360 | 2.242575e-49 | -8.615850e-47 |
| Msa0864610 | Msa1401820 | 0.985052 | 2.215958e-162 | -8.615850e-47 |
| Msa0945040 | Msa1401820 | 0.950583 | 1.220875e-108 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401820 | MtrunA17_Chr5g0447201 | 97.105 | 760 | 22 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1535 |
| Msa1401820 | MtrunA17_Chr1g0173521 | 58.816 | 760 | 293 | 2 | 1 | 760 | 58 | 797 | 0.0 | 942 |
| Msa1401820 | MtrunA17_Chr4g0064311 | 54.183 | 753 | 316 | 7 | 1 | 750 | 98 | 824 | 0.0 | 844 |
| Msa1401820 | MtrunA17_Chr7g0257731 | 58.966 | 619 | 226 | 4 | 165 | 760 | 1 | 614 | 0.0 | 772 |
| Msa1401820 | MtrunA17_Chr3g0116641 | 47.193 | 748 | 381 | 5 | 1 | 744 | 1 | 738 | 0.0 | 724 |
| Msa1401820 | MtrunA17_Chr6g0449521 | 38.860 | 772 | 426 | 15 | 7 | 756 | 35 | 782 | 0.0 | 541 |
| Msa1401820 | MtrunA17_Chr4g0058701 | 39.300 | 771 | 390 | 15 | 7 | 735 | 22 | 756 | 0.0 | 539 |
| Msa1401820 | MtrunA17_Chr3g0117141 | 38.562 | 765 | 420 | 12 | 7 | 742 | 28 | 771 | 7.12e-179 | 531 |
| Msa1401820 | MtrunA17_Chr7g0267991 | 37.684 | 475 | 264 | 8 | 291 | 747 | 384 | 844 | 1.16e-94 | 313 |
| Msa1401820 | MtrunA17_Chr7g0267991 | 34.818 | 247 | 137 | 3 | 42 | 282 | 71 | 299 | 5.79e-41 | 161 |
| Msa1401820 | MtrunA17_Chr5g0427081 | 96.454 | 141 | 5 | 0 | 520 | 660 | 10 | 150 | 4.28e-92 | 285 |
| Msa1401820 | MtrunA17_Chr8g0380141 | 43.709 | 302 | 157 | 4 | 296 | 587 | 380 | 678 | 3.85e-78 | 265 |
| Msa1401820 | MtrunA17_Chr8g0380141 | 34.959 | 246 | 138 | 4 | 42 | 282 | 70 | 298 | 1.36e-41 | 162 |
| Msa1401820 | MtrunA17_Chr1g0201161 | 41.883 | 308 | 164 | 5 | 284 | 579 | 370 | 674 | 2.88e-70 | 248 |
| Msa1401820 | MtrunA17_Chr1g0201161 | 33.865 | 251 | 134 | 4 | 42 | 282 | 75 | 303 | 3.79e-39 | 156 |
| Msa1401820 | MtrunA17_Chr1g0201161 | 29.885 | 174 | 114 | 4 | 570 | 739 | 734 | 903 | 1.71e-13 | 74.3 |
| Msa1401820 | MtrunA17_Chr7g0270181 | 36.975 | 357 | 204 | 6 | 401 | 747 | 4 | 349 | 7.18e-65 | 220 |
| Msa1401820 | MtrunA17_Chr7g0257741 | 57.516 | 153 | 55 | 2 | 1 | 152 | 1 | 144 | 1.05e-50 | 174 |
| Msa1401820 | MtrunA17_Chr3g0139771 | 78.261 | 69 | 15 | 0 | 681 | 749 | 1 | 69 | 6.15e-16 | 73.6 |
| Msa1401820 | MtrunA17_Chr8g0380131 | 38.043 | 92 | 54 | 1 | 642 | 733 | 3 | 91 | 1.46e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401820 | AT1G55740.1 | 71.711 | 760 | 206 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1125 |
| Msa1401820 | AT3G57520.1 | 59.335 | 782 | 283 | 4 | 1 | 758 | 1 | 771 | 0.0 | 991 |
| Msa1401820 | AT3G57520.2 | 62.969 | 667 | 236 | 2 | 1 | 667 | 1 | 656 | 0.0 | 912 |
| Msa1401820 | AT5G20250.4 | 54.290 | 746 | 325 | 6 | 1 | 744 | 96 | 827 | 0.0 | 851 |
| Msa1401820 | AT5G20250.3 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa1401820 | AT5G20250.1 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa1401820 | AT5G20250.2 | 54.290 | 746 | 325 | 6 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa1401820 | AT3G57520.3 | 62.852 | 568 | 197 | 3 | 1 | 568 | 1 | 554 | 0.0 | 774 |
| Msa1401820 | AT5G40390.1 | 38.262 | 771 | 425 | 16 | 9 | 748 | 24 | 774 | 1.76e-177 | 528 |
| Msa1401820 | AT4G01970.1 | 37.634 | 465 | 268 | 10 | 296 | 742 | 398 | 858 | 9.92e-97 | 320 |
| Msa1401820 | AT4G01970.1 | 33.544 | 316 | 160 | 7 | 21 | 305 | 49 | 345 | 2.14e-42 | 166 |
| Msa1401820 | AT4G01970.2 | 37.634 | 465 | 268 | 10 | 296 | 742 | 445 | 905 | 3.67e-96 | 319 |
| Msa1401820 | AT4G01970.2 | 33.544 | 316 | 160 | 7 | 21 | 305 | 96 | 392 | 3.34e-42 | 166 |
Find 211 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTCCTTGCCGTCTTTC+TGG | 0.066893 | tig0022765:+30727 | None:intergenic |
| TTAGAGCTTCAGATGATTTC+TGG | 0.146587 | tig0022765:-30010 | Msa1401820:CDS |
| TCTCGGGATTTCATGGTAAT+TGG | 0.169806 | tig0022765:+28937 | None:intergenic |
| TAAACCAATAGGAGCAAATT+TGG | 0.190235 | tig0022765:+28867 | None:intergenic |
| TTAGATACCATTGCAATTAA+TGG | 0.192004 | tig0022765:-30402 | Msa1401820:CDS |
| CAATCCTTGGTTGGTCTTCC+TGG | 0.200624 | tig0022765:+29433 | None:intergenic |
| GTTCTTGTTACTCCTGCTTC+TGG | 0.263308 | tig0022765:-32590 | Msa1401820:CDS |
| AATCATTACCTGACATAAAT+AGG | 0.266033 | tig0022765:+29733 | None:intergenic |
| GGGACTCATTTGGTGTTCAT+TGG | 0.269955 | tig0022765:-31693 | Msa1401820:CDS |
| GTTTCTTTCTCATTTGCATT+TGG | 0.276272 | tig0022765:-32786 | Msa1401820:five_prime_UTR |
| TTGATCAATGGTGCATTTCT+TGG | 0.278920 | tig0022765:-32560 | Msa1401820:CDS |
| GGACTCATTTGGTGTTCATT+GGG | 0.286060 | tig0022765:-31692 | Msa1401820:CDS |
| GAGTTTAGTTCCGAATTTAA+TGG | 0.294252 | tig0022765:-28811 | Msa1401820:CDS |
| CGACAGTGGCAGATGATAAA+TGG | 0.300808 | tig0022765:-29122 | Msa1401820:CDS |
| CAACAAATGATTCCGTTATC+AGG | 0.308551 | tig0022765:+30183 | None:intergenic |
| GCACGCAATAACAGGATATT+GGG | 0.318440 | tig0022765:-30526 | Msa1401820:CDS |
| TTCATATTCTCGGGATTTCA+TGG | 0.321029 | tig0022765:+28930 | None:intergenic |
| GCACAGTCACTGACATCATT+AGG | 0.326937 | tig0022765:-29167 | Msa1401820:CDS |
| GGTGCCAAATTTGCTCCTAT+TGG | 0.331580 | tig0022765:-28871 | Msa1401820:CDS |
| TTAATCAAGATGTTTAATTC+AGG | 0.335147 | tig0022765:-28847 | Msa1401820:CDS |
| CCAAACCAGTTCAACATATC+TGG | 0.338607 | tig0022765:+31168 | None:intergenic |
| ATTTACAACTCCATTAAATT+CGG | 0.352036 | tig0022765:+28801 | None:intergenic |
| TCTGGTGGTTCTTTGATCAA+TGG | 0.352616 | tig0022765:-32572 | Msa1401820:CDS |
| CATCTGCCACTGTCGATAAA+TGG | 0.356356 | tig0022765:+29130 | None:intergenic |
| GGCACGCAATAACAGGATAT+TGG | 0.359380 | tig0022765:-30527 | Msa1401820:CDS |
| CAGAATATCCTTGAAACTCT+TGG | 0.359438 | tig0022765:-30282 | Msa1401820:CDS |
| ATATTAAGAGCTAAACTTCC+AGG | 0.366671 | tig0022765:-29451 | Msa1401820:CDS |
| TTTGCTTATTGAAGCACATA+AGG | 0.367083 | tig0022765:-32044 | Msa1401820:CDS |
| TGGAACATGAATGACTATTC+TGG | 0.373902 | tig0022765:-29270 | Msa1401820:CDS |
| CATTTGGTGTTCATTGGGGC+TGG | 0.375289 | tig0022765:-31687 | Msa1401820:CDS |
| TGGTGTTTCTTCTGATCAAA+AGG | 0.383403 | tig0022765:-32540 | Msa1401820:CDS |
| GGAGCAAATTTGGCACCATT+TGG | 0.387548 | tig0022765:+28877 | None:intergenic |
| CTGGATTCTCGTCGTGGATA+AGG | 0.394790 | tig0022765:+29190 | None:intergenic |
| TTCAGTTATGAGGAAGAATC+AGG | 0.395624 | tig0022765:-28688 | Msa1401820:CDS |
| CTAGCATCCGCTGGTATTGA+TGG | 0.397699 | tig0022765:-30321 | Msa1401820:CDS |
| CATTGATATAACTCTTTCTC+CGG | 0.410663 | tig0022765:+28640 | None:intergenic |
| CTTGATGGTGTTAGGGAAGA+AGG | 0.410849 | tig0022765:-32636 | Msa1401820:CDS |
| GCATTTGTTATGACTTCATA+AGG | 0.411544 | tig0022765:+31657 | None:intergenic |
| ATTGCAGTCTCCTCAAGATA+TGG | 0.412765 | tig0022765:-29290 | Msa1401820:intron |
| TTGACTCCAGGAGATGAGAT+AGG | 0.414473 | tig0022765:+30447 | None:intergenic |
| TGTTTCCATTCAACACCATT+GGG | 0.415542 | tig0022765:+30913 | None:intergenic |
| AAGATTGAAGTCGTGGTGTC+CGG | 0.416723 | tig0022765:+29504 | None:intergenic |
| GTGAATTTATGCAGCCAGAT+TGG | 0.418742 | tig0022765:-29923 | Msa1401820:CDS |
| TGAATTTATGCAGCCAGATT+GGG | 0.419847 | tig0022765:-29922 | Msa1401820:CDS |
| CCAGATATGTTGAACTGGTT+TGG | 0.421533 | tig0022765:-31168 | Msa1401820:CDS |
| GCTTTCCCTATCTCATCTCC+TGG | 0.423799 | tig0022765:-30453 | Msa1401820:CDS |
| ATTGGAATAGAAACATCCTT+TGG | 0.425085 | tig0022765:+28955 | None:intergenic |
| GATGGAAACTTGATGGTGTT+AGG | 0.426147 | tig0022765:-32644 | Msa1401820:CDS |
| GATTTCAGGGCTGTTCTTCA+AGG | 0.428389 | tig0022765:-31935 | Msa1401820:CDS |
| GGAATTTGATGGGACTCATT+TGG | 0.432327 | tig0022765:-31703 | Msa1401820:CDS |
| TAATGCTTCATCTGGTTGGT+TGG | 0.433017 | tig0022765:+30422 | None:intergenic |
| AGGGAAGAAGGTTCTGAGTC+AGG | 0.435038 | tig0022765:-32624 | Msa1401820:CDS |
| TTGATGCAGTTCAAAGCGTT+CGG | 0.437922 | tig0022765:-30039 | Msa1401820:intron |
| CCATTTGGTAATTCTTTCAC+AGG | 0.443895 | tig0022765:+28892 | None:intergenic |
| CACAGTCACTGACATCATTA+GGG | 0.443981 | tig0022765:-29166 | Msa1401820:CDS |
| TACCTCTTTCCATCTCTAGC+AGG | 0.444123 | tig0022765:+29397 | None:intergenic |
| AACATCTTGATTAAACCAAT+AGG | 0.450743 | tig0022765:+28856 | None:intergenic |
| AATGACTATTCTGGAGTTGT+TGG | 0.457081 | tig0022765:-29261 | Msa1401820:CDS |
| TATGTGTGGCACGCAATAAC+AGG | 0.457665 | tig0022765:-30534 | Msa1401820:CDS |
| CCGCGTAGGTAGAACTATCT+TGG | 0.458879 | tig0022765:+31981 | None:intergenic |
| ATGACTATTCTGGAGTTGTT+GGG | 0.459794 | tig0022765:-29260 | Msa1401820:CDS |
| CTTAAAACATACCACAAAGA+TGG | 0.460266 | tig0022765:+29076 | None:intergenic |
| AGATGCCAGATATGTTGAAC+TGG | 0.461398 | tig0022765:-31173 | Msa1401820:CDS |
| ATGTGAATTGTGTGAGATGC+AGG | 0.463395 | tig0022765:+29978 | None:intergenic |
| GGTGTTAAACCTGGGATTAG+TGG | 0.464175 | tig0022765:-30501 | Msa1401820:CDS |
| GGTTGGTTGGACTTGACTCC+AGG | 0.465627 | tig0022765:+30435 | None:intergenic |
| CACATTCTCTGAAGTGACAT+TGG | 0.467536 | tig0022765:+31119 | None:intergenic |
| TGTTGCTGATGGAAACTTGA+TGG | 0.470783 | tig0022765:-32651 | Msa1401820:CDS |
| ATGTTTCCATTCAACACCAT+TGG | 0.474051 | tig0022765:+30912 | None:intergenic |
| CTTATCCACGACGAGAATCC+AGG | 0.474066 | tig0022765:-29189 | Msa1401820:CDS |
| TTTCAAGAAAAGATGACTGT+AGG | 0.474623 | tig0022765:-32686 | Msa1401820:exon |
| ATGAATCACAGAACAGAGAA+AGG | 0.474977 | tig0022765:+32734 | None:intergenic |
| TCAATGAAAGTGCGCGGGTG+TGG | 0.475072 | tig0022765:-28775 | Msa1401820:CDS |
| CTGAAATCTCCTTCCAAAAG+AGG | 0.477676 | tig0022765:+31950 | None:intergenic |
| TTCAAGAAAAGATGACTGTA+GGG | 0.477683 | tig0022765:-32685 | Msa1401820:exon |
| ATGATGTCAGTGACTGTGCC+TGG | 0.481533 | tig0022765:+29171 | None:intergenic |
| CCATCAAATTCCTCCACATC+AGG | 0.481977 | tig0022765:+31714 | None:intergenic |
| ACAATACAGACGGATTGTAT+AGG | 0.482731 | tig0022765:-30152 | Msa1401820:intron |
| ACATGAAACATATCCCAATC+TGG | 0.482945 | tig0022765:+29909 | None:intergenic |
| ATGGTATCTAATGCTTCATC+TGG | 0.485206 | tig0022765:+30414 | None:intergenic |
| GGAGCTGGTTGGTGCAAAGT+TGG | 0.487373 | tig0022765:-29222 | Msa1401820:CDS |
| ATCAGAAAATAAGCAATCCT+TGG | 0.487411 | tig0022765:+29420 | None:intergenic |
| CATGCTGCTGCAAGAGCAGT+TGG | 0.488415 | tig0022765:-29763 | Msa1401820:CDS |
| GAGGATGTCCTATTTATGTC+AGG | 0.491039 | tig0022765:-29741 | Msa1401820:intron |
| AGATTGAAGTCGTGGTGTCC+GGG | 0.497726 | tig0022765:+29505 | None:intergenic |
| CCTGATGTGGAGGAATTTGA+TGG | 0.498094 | tig0022765:-31714 | Msa1401820:CDS |
| TATCTAATGCTTCATCTGGT+TGG | 0.499999 | tig0022765:+30418 | None:intergenic |
| CATTGGAGGCATCGATCTCT+AGG | 0.501698 | tig0022765:-30212 | Msa1401820:CDS |
| AAGTTTGTCATAATTGATGA+TGG | 0.501793 | tig0022765:-30958 | Msa1401820:CDS |
| TCTAGGAACTTTCCTGATAA+CGG | 0.503841 | tig0022765:-30195 | Msa1401820:CDS |
| ATTGAGATTTGTGTTGAAAG+TGG | 0.506532 | tig0022765:-31896 | Msa1401820:intron |
| ATCAAGATGTTTAATTCAGG+AGG | 0.506929 | tig0022765:-28844 | Msa1401820:CDS |
| ATCCTTGAAACTCTTGGAGC+AGG | 0.507848 | tig0022765:-30276 | Msa1401820:CDS |
| AGAGGTGGAATTCAGTTATG+AGG | 0.508775 | tig0022765:-28698 | Msa1401820:CDS |
| ACTGGTTTGGATGGTGTACA+TGG | 0.510270 | tig0022765:-31155 | Msa1401820:CDS |
| ATGTGATGAATTCCCATGGC+AGG | 0.510914 | tig0022765:+30690 | None:intergenic |
| GTGTGAGATGCAGGGTCTCT+TGG | 0.512827 | tig0022765:+29987 | None:intergenic |
| GCTCTTAATATAGAACCGTC+AGG | 0.513998 | tig0022765:+29463 | None:intergenic |
| ACATACTCAAGCTTGCCAAC+AGG | 0.515300 | tig0022765:+32500 | None:intergenic |
| ATCAAAGAACCACCAGAAGC+AGG | 0.518612 | tig0022765:+32578 | None:intergenic |
| ACTTGCAAGGAAATATCATC+AGG | 0.521049 | tig0022765:-30235 | Msa1401820:CDS |
| TACTGTTGATTCAGAAGAGG+TGG | 0.521451 | tig0022765:-28713 | Msa1401820:CDS |
| TTCCAGAAAGACGGCAAGGA+AGG | 0.521640 | tig0022765:-30729 | Msa1401820:CDS |
| TCAATTATGACAAACTTAGC+AGG | 0.522019 | tig0022765:+30964 | None:intergenic |
| ACCATTGCAATTAATGGACT+CGG | 0.524368 | tig0022765:-30396 | Msa1401820:CDS |
| GTATTCAATTGTCAAGGAGC+TGG | 0.525702 | tig0022765:-29237 | Msa1401820:CDS |
| CTTGTTACTCCTGCTTCTGG+TGG | 0.525865 | tig0022765:-32587 | Msa1401820:CDS |
| CTGATGAATAAGCACCGAAA+AGG | 0.528725 | tig0022765:+28752 | None:intergenic |
| GAAAATAAGCAATCCTTGGT+TGG | 0.534266 | tig0022765:+29424 | None:intergenic |
| TTAAAACATACCACAAAGAT+GGG | 0.534469 | tig0022765:+29077 | None:intergenic |
| TTGTCATCGCGAGAGAAAGA+AGG | 0.535948 | tig0022765:-31303 | Msa1401820:intron |
| ATGGAAACTTGATGGTGTTA+GGG | 0.536276 | tig0022765:-32643 | Msa1401820:CDS |
| TATTGGGGTGGTGTTAAACC+TGG | 0.537243 | tig0022765:-30510 | Msa1401820:CDS |
| CACTCATATCTAGCATCCGC+TGG | 0.540430 | tig0022765:-30330 | Msa1401820:CDS |
| CAAGGAAGGTCATCGGATAG+AGG | 0.543698 | tig0022765:-30715 | Msa1401820:CDS |
| TGTTCCATGCCACTAATCCC+AGG | 0.544946 | tig0022765:+30492 | None:intergenic |
| GTCCTGCTCCAAGAGTTTCA+AGG | 0.548641 | tig0022765:+30274 | None:intergenic |
| GAAACTCTTGGAGCAGGACA+TGG | 0.552642 | tig0022765:-30270 | Msa1401820:CDS |
| TTGCTTATTGAAGCACATAA+GGG | 0.552730 | tig0022765:-32043 | Msa1401820:CDS |
| GTGGCAGATGATAAATGGAC+AGG | 0.554459 | tig0022765:-29117 | Msa1401820:CDS |
| TCGGTGCTTATTCATCAGCT+CGG | 0.554791 | tig0022765:-28747 | Msa1401820:CDS |
| ATTTCAGGGCTGTTCTTCAA+GGG | 0.556814 | tig0022765:-31934 | Msa1401820:CDS |
| TCGGATAGAGGACCCTGCCA+TGG | 0.557137 | tig0022765:-30703 | Msa1401820:CDS |
| TGGAGCAGGACATGGTGGGA+GGG | 0.557166 | tig0022765:-30262 | Msa1401820:CDS |
| TGGACCCCAATGGTGTTGAA+TGG | 0.557644 | tig0022765:-30918 | Msa1401820:CDS |
| CCTGTGAAAGAATTACCAAA+TGG | 0.557659 | tig0022765:-28892 | Msa1401820:CDS |
| GGTGTTTCTTCTGATCAAAA+GGG | 0.558333 | tig0022765:-32539 | Msa1401820:CDS |
| GACTCATTTGGTGTTCATTG+GGG | 0.558449 | tig0022765:-31691 | Msa1401820:CDS |
| GAAATATCATCAGGCATTGG+AGG | 0.559741 | tig0022765:-30226 | Msa1401820:CDS |
| GAAAAGATGACTGTAGGGGC+AGG | 0.561229 | tig0022765:-32680 | Msa1401820:exon |
| CGGATAGAGGACCCTGCCAT+GGG | 0.562030 | tig0022765:-30702 | Msa1401820:CDS |
| TTGGAGCAGGACATGGTGGG+AGG | 0.562696 | tig0022765:-30263 | Msa1401820:CDS |
| GTGGTGGATGACTCAGAGAA+TGG | 0.563083 | tig0022765:-32104 | Msa1401820:CDS |
| TGAATCACAGAACAGAGAAA+GGG | 0.563091 | tig0022765:+32735 | None:intergenic |
| ACTTCAGAGAATGTGAAAGA+AGG | 0.564462 | tig0022765:-31111 | Msa1401820:CDS |
| GCCGAGTCCATTAATTGCAA+TGG | 0.564685 | tig0022765:+30395 | None:intergenic |
| GCAGGAATATCTGTTGCTGA+TGG | 0.567325 | tig0022765:-32662 | Msa1401820:CDS |
| AAGAAGCTTGTACTTCCTGA+CGG | 0.570895 | tig0022765:-29478 | Msa1401820:CDS |
| GTTGGGGTATTCAATTGTCA+AGG | 0.578349 | tig0022765:-29243 | Msa1401820:CDS |
| GGAACAAAGAGCATTGCTGA+AGG | 0.578391 | tig0022765:-32765 | Msa1401820:five_prime_UTR |
| TGACTCCAGGAGATGAGATA+GGG | 0.578809 | tig0022765:+30448 | None:intergenic |
| TTTATAGGCATGTGTATGTG+TGG | 0.579591 | tig0022765:-30548 | Msa1401820:intron |
| CATTCATGTTCCATATCTTG+AGG | 0.580578 | tig0022765:+29280 | None:intergenic |
| GGAACATTATGAGTCAAAGA+TGG | 0.580896 | tig0022765:-30475 | Msa1401820:CDS |
| TCAAGATGTTTAATTCAGGA+GGG | 0.581133 | tig0022765:-28843 | Msa1401820:CDS |
| ATTTCAGAGTCTTCATCCGA+TGG | 0.583061 | tig0022765:-29794 | Msa1401820:intron |
| ATATGTTGAACTGGTTTGGA+TGG | 0.583851 | tig0022765:-31164 | Msa1401820:CDS |
| CGGAGAAAGAGTTATATCAA+TGG | 0.585923 | tig0022765:-28639 | Msa1401820:CDS |
| CAAGATGTTTAATTCAGGAG+GGG | 0.587768 | tig0022765:-28842 | Msa1401820:CDS |
| TTGTCATAATTGATGATGGA+TGG | 0.588951 | tig0022765:-30954 | Msa1401820:CDS |
| GACTATAGATTTGAGTGTGC+CGG | 0.590182 | tig0022765:-28659 | Msa1401820:CDS |
| GCAGCATGATATTCAGCCAT+CGG | 0.591613 | tig0022765:+29778 | None:intergenic |
| AGTCGCAGAGTCTTTCCTGT+TGG | 0.594965 | tig0022765:-32515 | Msa1401820:CDS |
| TTATGAGGAAGAATCAGGAT+TGG | 0.596231 | tig0022765:-28683 | Msa1401820:CDS |
| CATAAGGGTCGTGATATTGA+CGG | 0.598066 | tig0022765:-32028 | Msa1401820:CDS |
| TCTTCAAAAGATTGAAGTCG+TGG | 0.598479 | tig0022765:+29497 | None:intergenic |
| ATGTTTCAATGAAAGTGCGC+GGG | 0.600368 | tig0022765:-28780 | Msa1401820:CDS |
| GATTACTGTTGATTCAGAAG+AGG | 0.601348 | tig0022765:-28716 | Msa1401820:CDS |
| GAACAAAGAGCATTGCTGAA+GGG | 0.603346 | tig0022765:-32764 | Msa1401820:five_prime_UTR |
| TCAATTGTCAAGGAGCTGGT+TGG | 0.603577 | tig0022765:-29233 | Msa1401820:CDS |
| AATCACAAATTCCAGAAAGA+CGG | 0.606328 | tig0022765:-30738 | Msa1401820:CDS |
| TCACACAATTCACATTGCAT+CGG | 0.606593 | tig0022765:-29970 | Msa1401820:CDS |
| TAAACCTGGGATTAGTGGCA+TGG | 0.606597 | tig0022765:-30496 | Msa1401820:CDS |
| TGACTATTCTGGAGTTGTTG+GGG | 0.608376 | tig0022765:-29259 | Msa1401820:CDS |
| CTGTGCCTGGATTCTCGTCG+TGG | 0.608941 | tig0022765:+29184 | None:intergenic |
| ATCCTGCTAGAGATGGAAAG+AGG | 0.609009 | tig0022765:-29399 | Msa1401820:intron |
| GAATCAACAGTAATCAACTT+CGG | 0.612554 | tig0022765:+28724 | None:intergenic |
| ATTGGGGTGGTGTTAAACCT+GGG | 0.617867 | tig0022765:-30509 | Msa1401820:CDS |
| TGCATGAGTCACAATACAGA+CGG | 0.618170 | tig0022765:-30162 | Msa1401820:CDS |
| CATTTGGTAATTCTTTCACA+GGG | 0.619704 | tig0022765:+28893 | None:intergenic |
| AATTCAAAAGGTTTCAACAG+TGG | 0.620498 | tig0022765:+32708 | None:intergenic |
| ACTCTTGGAGCAGGACATGG+TGG | 0.623127 | tig0022765:-30267 | Msa1401820:CDS |
| GCTGCTGCAAGAGCAGTTGG+AGG | 0.623143 | tig0022765:-29760 | Msa1401820:CDS |
| TGGTGGATGACTCAGAGAAT+GGG | 0.624213 | tig0022765:-32103 | Msa1401820:CDS |
| TCTGTTAGCATGGACCCCAA+TGG | 0.628808 | tig0022765:-30928 | Msa1401820:CDS |
| TGGATGGCAATCTGTTAGCA+TGG | 0.629189 | tig0022765:-30938 | Msa1401820:CDS |
| AGGGTCGTGATATTGACGGA+GGG | 0.630237 | tig0022765:-32024 | Msa1401820:CDS |
| AAGACGGCAAGGAAGGTCAT+CGG | 0.630476 | tig0022765:-30722 | Msa1401820:CDS |
| TGTGATGAATTCCCATGGCA+GGG | 0.631193 | tig0022765:+30691 | None:intergenic |
| CTCTTGGAGCAGGACATGGT+GGG | 0.631869 | tig0022765:-30266 | Msa1401820:CDS |
| AAGGAAATATCATCAGGCAT+TGG | 0.632296 | tig0022765:-30229 | Msa1401820:CDS |
| GTGGGAGGGTGAAACTTGCA+AGG | 0.634046 | tig0022765:-30248 | Msa1401820:CDS |
| GTTTCCATTCAACACCATTG+GGG | 0.635207 | tig0022765:+30914 | None:intergenic |
| ATGTTGTGTAGCGACAAGCC+CGG | 0.639558 | tig0022765:-29523 | Msa1401820:intron |
| ACAAAGATGGGAAAATATGA+CGG | 0.641050 | tig0022765:+29089 | None:intergenic |
| TCAAGAAAAGATGACTGTAG+GGG | 0.642324 | tig0022765:-32684 | Msa1401820:exon |
| TGAAGTAGTCTATCTTCCAA+AGG | 0.643888 | tig0022765:-28971 | Msa1401820:CDS |
| CAGCGGATGCTAGATATGAG+TGG | 0.644150 | tig0022765:+30331 | None:intergenic |
| CTGATGTGGAGGAATTTGAT+GGG | 0.644921 | tig0022765:-31713 | Msa1401820:CDS |
| ATGTGAAAGAAGGATTACAA+AGG | 0.646563 | tig0022765:-31101 | Msa1401820:intron |
| AAACTTTCTCAGGATTCACA+AGG | 0.647279 | tig0022765:+30373 | None:intergenic |
| ATTGACGGAGGGGTTGACAG+TGG | 0.659836 | tig0022765:-32013 | Msa1401820:CDS |
| AAATGAGAAAGAAACAGAGA+AGG | 0.660930 | tig0022765:+32794 | None:intergenic |
| ACTCAGAGAATGGGTAACTG+TGG | 0.666426 | tig0022765:-32094 | Msa1401820:CDS |
| GATTGTAGGATGTCCTGATG+TGG | 0.668084 | tig0022765:-31727 | Msa1401820:intron |
| CACGCAATAACAGGATATTG+GGG | 0.669516 | tig0022765:-30525 | Msa1401820:CDS |
| CAAATTCCAGAAAGACGGCA+AGG | 0.669689 | tig0022765:-30733 | Msa1401820:CDS |
| AAGAGGTAACAAAACCGCGT+AGG | 0.674435 | tig0022765:+31967 | None:intergenic |
| GGGTCGTGATATTGACGGAG+GGG | 0.674757 | tig0022765:-32023 | Msa1401820:CDS |
| ACTTCCAGGAAGACCAACCA+AGG | 0.682213 | tig0022765:-29437 | Msa1401820:CDS |
| CCAAGATAGTTCTACCTACG+CGG | 0.682973 | tig0022765:-31981 | Msa1401820:CDS |
| CTGGTTTGGATGGTGTACAT+GGG | 0.686671 | tig0022765:-31154 | Msa1401820:CDS |
| TGTAGGATGTCCTGATGTGG+AGG | 0.686980 | tig0022765:-31724 | Msa1401820:intron |
| AAGGGTCGTGATATTGACGG+AGG | 0.687446 | tig0022765:-32025 | Msa1401820:CDS |
| AATGTTTCAATGAAAGTGCG+CGG | 0.689249 | tig0022765:-28781 | Msa1401820:CDS |
| TGTGAATTGTGTGAGATGCA+GGG | 0.690378 | tig0022765:+29979 | None:intergenic |
| TATCGACCATTTATCGACAG+TGG | 0.693571 | tig0022765:-29136 | Msa1401820:CDS |
| CTGGCTGCATAAATTCACCA+AGG | 0.700322 | tig0022765:+29928 | None:intergenic |
| GCAATAACAGGATATTGGGG+TGG | 0.700706 | tig0022765:-30522 | Msa1401820:CDS |
| GGTAATGTGATGAATTCCCA+TGG | 0.713393 | tig0022765:+30686 | None:intergenic |
| TTTGACACCATCAATACCAG+CGG | 0.721207 | tig0022765:+30314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTATGTTTTTGTTTT+AGG | - | tig0022765:29190-29209 | Msa1401820:CDS | 10.0% |
| !!! | TTTATTATGTTTTTGTTTTA+GGG | - | tig0022765:29191-29210 | Msa1401820:CDS | 10.0% |
| !!! | TTTTTAAAGTAAAAATTTGA+TGG | - | tig0022765:30093-30112 | Msa1401820:intron | 10.0% |
| !! | TATTAACAAAAAAAGATTTA+AGG | + | tig0022765:31758-31777 | None:intergenic | 10.0% |
| !!! | TTTATAAATCAAATACTTTT+AGG | - | tig0022765:32750-32769 | Msa1401820:five_prime_UTR | 10.0% |
| !!! | TTATTATGTTTTTGTTTTAG+GGG | - | tig0022765:29192-29211 | Msa1401820:CDS | 15.0% |
| !! | TTATGTAATTGTTAACAAAT+TGG | - | tig0022765:29828-29847 | Msa1401820:intron | 15.0% |
| !!! | TCTTTTCTTGAAAATTCAAA+AGG | + | tig0022765:28659-28678 | None:intergenic | 20.0% |
| !! | ATAAACATCAAAAACCAAAA+GGG | + | tig0022765:29123-29142 | None:intergenic | 20.0% |
| !! | AATAAACATCAAAAACCAAA+AGG | + | tig0022765:29124-29143 | None:intergenic | 20.0% |
| !!! | TATTATGTTTTTGTTTTAGG+GGG | - | tig0022765:29193-29212 | Msa1401820:CDS | 20.0% |
| !!! | TTTTTTCAATTACTAGGATT+AGG | - | tig0022765:29859-29878 | Msa1401820:intron | 20.0% |
| !! | GTAAAACACAAAAATATTAG+AGG | + | tig0022765:30144-30163 | None:intergenic | 20.0% |
| !! | TTATTTATTTCCACTAAAAG+TGG | - | tig0022765:30276-30295 | Msa1401820:CDS | 20.0% |
| !! | TATATTTGACAATGAAAGTT+GGG | + | tig0022765:30495-30514 | None:intergenic | 20.0% |
| !! | ATATATTTGACAATGAAAGT+TGG | + | tig0022765:30496-30515 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTTTGATTTCAT+TGG | + | tig0022765:30690-30709 | None:intergenic | 20.0% |
| !!! | TTATTGAATAAATCTAGAGT+AGG | + | tig0022765:31267-31286 | None:intergenic | 20.0% |
| !! | TCTAGATTTATTCAATAACA+AGG | - | tig0022765:31269-31288 | Msa1401820:intron | 20.0% |
| !! | TCATGTAAGTTGTTAAATAT+AGG | - | tig0022765:31460-31479 | Msa1401820:intron | 20.0% |
| !! | CTATGAACCAAAATATATTT+AGG | + | tig0022765:31490-31509 | None:intergenic | 20.0% |
| !! | TTAATCAAGATGTTTAATTC+AGG | - | tig0022765:32505-32524 | Msa1401820:intron | 20.0% |
| !! | ATTTACAACTCCATTAAATT+CGG | + | tig0022765:32554-32573 | None:intergenic | 20.0% |
| !!! | TAAATCAAATACTTTTAGGT+TGG | - | tig0022765:32754-32773 | Msa1401820:five_prime_UTR | 20.0% |
| ! | TCACACAAAAAACATACAAA+AGG | + | tig0022765:28990-29009 | None:intergenic | 25.0% |
| ! | CTATCATCATGATAAAAACA+TGG | - | tig0022765:29031-29050 | Msa1401820:intron | 25.0% |
| ! | TAAACATCAAAAACCAAAAG+GGG | + | tig0022765:29122-29141 | None:intergenic | 25.0% |
| ! | TTTGCAAGTGTTAATATTGA+AGG | - | tig0022765:29147-29166 | Msa1401820:CDS | 25.0% |
| !!! | CGTTTTTTGTGTTTGTAAAT+CGG | - | tig0022765:29504-29523 | Msa1401820:CDS | 25.0% |
| !!! | GTTTTTTGTGTTTGTAAATC+GGG | - | tig0022765:29505-29524 | Msa1401820:CDS | 25.0% |
| !!! | TTAGTTTTTACAGTTATGTG+TGG | + | tig0022765:29537-29556 | None:intergenic | 25.0% |
| !!! | TCTGAGTTTTTTCAATTACT+AGG | - | tig0022765:29853-29872 | Msa1401820:intron | 25.0% |
| !!! | TTTGAACTTTTTCTTTGTTC+AGG | - | tig0022765:30000-30019 | Msa1401820:CDS | 25.0% |
| !! | TTACGTTATTTACAGTTTTG+AGG | - | tig0022765:30354-30373 | Msa1401820:CDS | 25.0% |
| ! | AAGTTTGTCATAATTGATGA+TGG | - | tig0022765:30394-30413 | Msa1401820:CDS | 25.0% |
| !!! | TTTTCGTCGTTTTTGTTTAT+AGG | - | tig0022765:30789-30808 | Msa1401820:intron | 25.0% |
| ! | TTAGATACCATTGCAATTAA+TGG | - | tig0022765:30950-30969 | Msa1401820:CDS | 25.0% |
| ! | TAAAAGTGAAAAACTTTCTC+AGG | + | tig0022765:30992-31011 | None:intergenic | 25.0% |
| !! | AGGAGATCCTAAATATATTT+TGG | - | tig0022765:31480-31499 | Msa1401820:intron | 25.0% |
| ! | AATCATTACCTGACATAAAT+AGG | + | tig0022765:31622-31641 | None:intergenic | 25.0% |
| ! | AGTTAGAAGAGAATAACTTA+TGG | + | tig0022765:31650-31669 | None:intergenic | 25.0% |
| !!! | TATGTAATTGTTTGTTGTCT+TGG | - | tig0022765:31680-31699 | Msa1401820:CDS | 25.0% |
| ! | TTAAAACATACCACAAAGAT+GGG | + | tig0022765:32278-32297 | None:intergenic | 25.0% |
| ! | TCGTAAAAACTTCATATTCT+CGG | + | tig0022765:32435-32454 | None:intergenic | 25.0% |
| ! | AACATCTTGATTAAACCAAT+AGG | + | tig0022765:32499-32518 | None:intergenic | 25.0% |
| !!! | AAATACTTTTAGGTTGGTTA+TGG | - | tig0022765:32760-32779 | Msa1401820:five_prime_UTR | 25.0% |
| GTTTCTTTCTCATTTGCATT+TGG | - | tig0022765:28566-28585 | Msa1401820:three_prime_UTR | 30.0% | |
| AATTCAAAAGGTTTCAACAG+TGG | + | tig0022765:28647-28666 | None:intergenic | 30.0% | |
| TTTCAAGAAAAGATGACTGT+AGG | - | tig0022765:28666-28685 | Msa1401820:CDS | 30.0% | |
| TTCAAGAAAAGATGACTGTA+GGG | - | tig0022765:28667-28686 | Msa1401820:CDS | 30.0% | |
| CTGTGTTTGTTTAAGGATTA+AGG | - | tig0022765:29093-29112 | Msa1401820:CDS | 30.0% | |
| TTTGCTTATTGAAGCACATA+AGG | - | tig0022765:29308-29327 | Msa1401820:intron | 30.0% | |
| TTGCTTATTGAAGCACATAA+GGG | - | tig0022765:29309-29328 | Msa1401820:intron | 30.0% | |
| ATTGAGATTTGTGTTGAAAG+TGG | - | tig0022765:29456-29475 | Msa1401820:CDS | 30.0% | |
| ! | TATGCATTGTGAATTTTTGC+TGG | - | tig0022765:29596-29615 | Msa1401820:intron | 30.0% |
| ! | ATGCATTGTGAATTTTTGCT+GGG | - | tig0022765:29597-29616 | Msa1401820:intron | 30.0% |
| !! | GCATTTGTTATGACTTCATA+AGG | + | tig0022765:29698-29717 | None:intergenic | 30.0% |
| AAACAAGAACAAAGAAGAAC+TGG | + | tig0022765:29763-29782 | None:intergenic | 30.0% | |
| TGTTCCATTAGTTCAGTATT+AGG | - | tig0022765:29922-29941 | Msa1401820:CDS | 30.0% | |
| AAGTCCTAATACTGAACTAA+TGG | + | tig0022765:29929-29948 | None:intergenic | 30.0% | |
| AAAGTTCATCACTGCAAATT+AGG | + | tig0022765:29980-29999 | None:intergenic | 30.0% | |
| GGCATCTGAATAATACAAAT+AGG | + | tig0022765:30166-30185 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGGATTACAA+AGG | - | tig0022765:30251-30270 | Msa1401820:CDS | 30.0% | |
| !!! | GTTATTTACAGTTTTGAGGA+AGG | - | tig0022765:30358-30377 | Msa1401820:CDS | 30.0% |
| TCAATTATGACAAACTTAGC+AGG | + | tig0022765:30391-30410 | None:intergenic | 30.0% | |
| !! | TTGTCATAATTGATGATGGA+TGG | - | tig0022765:30398-30417 | Msa1401820:CDS | 30.0% |
| TTCGTCATTGTAAAAATGCA+TGG | + | tig0022765:30526-30545 | None:intergenic | 30.0% | |
| AATCACAAATTCCAGAAAGA+CGG | - | tig0022765:30614-30633 | Msa1401820:intron | 30.0% | |
| AAACGACGAAAAATTTGCAA+CGG | + | tig0022765:30781-30800 | None:intergenic | 30.0% | |
| ! | GCTTACAATACTATTTTCCT+TGG | - | tig0022765:31407-31426 | Msa1401820:intron | 30.0% |
| CACAACATTACAAAATCAGA+AGG | + | tig0022765:31817-31836 | None:intergenic | 30.0% | |
| ATATTAAGAGCTAAACTTCC+AGG | - | tig0022765:31901-31920 | Msa1401820:CDS | 30.0% | |
| ATCAGAAAATAAGCAATCCT+TGG | + | tig0022765:31935-31954 | None:intergenic | 30.0% | |
| CTTGTCAAGTAAGTAAAGTT+AGG | + | tig0022765:32004-32023 | None:intergenic | 30.0% | |
| ACAAAGATGGGAAAATATGA+CGG | + | tig0022765:32266-32285 | None:intergenic | 30.0% | |
| CTTAAAACATACCACAAAGA+TGG | + | tig0022765:32279-32298 | None:intergenic | 30.0% | |
| ! | CATCTTTGTGGTATGTTTTA+AGG | - | tig0022765:32277-32296 | Msa1401820:intron | 30.0% |
| TTTACATCACACTCCTAAAA+AGG | - | tig0022765:32301-32320 | Msa1401820:intron | 30.0% | |
| CAATTATACACAAGAAAAGC+TGG | + | tig0022765:32332-32351 | None:intergenic | 30.0% | |
| TGTTTATGATGTTTGTTTGC+AGG | - | tig0022765:32358-32377 | Msa1401820:intron | 30.0% | |
| ATTGGAATAGAAACATCCTT+TGG | + | tig0022765:32400-32419 | None:intergenic | 30.0% | |
| CGTAAAAACTTCATATTCTC+GGG | + | tig0022765:32434-32453 | None:intergenic | 30.0% | |
| ! | CATTTGGTAATTCTTTCACA+GGG | + | tig0022765:32462-32481 | None:intergenic | 30.0% |
| TAAACCAATAGGAGCAAATT+TGG | + | tig0022765:32488-32507 | None:intergenic | 30.0% | |
| ATCAAGATGTTTAATTCAGG+AGG | - | tig0022765:32508-32527 | Msa1401820:CDS | 30.0% | |
| TCAAGATGTTTAATTCAGGA+GGG | - | tig0022765:32509-32528 | Msa1401820:CDS | 30.0% | |
| ! | GAGTTTAGTTCCGAATTTAA+TGG | - | tig0022765:32541-32560 | Msa1401820:CDS | 30.0% |
| GAATCAACAGTAATCAACTT+CGG | + | tig0022765:32631-32650 | None:intergenic | 30.0% | |
| CATTGATATAACTCTTTCTC+CGG | + | tig0022765:32715-32734 | None:intergenic | 30.0% | |
| TGAATCACAGAACAGAGAAA+GGG | + | tig0022765:28620-28639 | None:intergenic | 35.0% | |
| ATGAATCACAGAACAGAGAA+AGG | + | tig0022765:28621-28640 | None:intergenic | 35.0% | |
| TCAAGAAAAGATGACTGTAG+GGG | - | tig0022765:28668-28687 | Msa1401820:CDS | 35.0% | |
| !! | ATGGAAACTTGATGGTGTTA+GGG | - | tig0022765:28709-28728 | Msa1401820:CDS | 35.0% |
| TTGATCAATGGTGCATTTCT+TGG | - | tig0022765:28792-28811 | Msa1401820:CDS | 35.0% | |
| TGGTGTTTCTTCTGATCAAA+AGG | - | tig0022765:28812-28831 | Msa1401820:CDS | 35.0% | |
| GGTGTTTCTTCTGATCAAAA+GGG | - | tig0022765:28813-28832 | Msa1401820:CDS | 35.0% | |
| GTTGACACTGTGTTTGTTTA+AGG | - | tig0022765:29086-29105 | Msa1401820:intron | 35.0% | |
| AGCAAAAACTGTGTCTCAAA+GGG | + | tig0022765:29294-29313 | None:intergenic | 35.0% | |
| AAGCAAAAACTGTGTCTCAA+AGG | + | tig0022765:29295-29314 | None:intergenic | 35.0% | |
| !! | GTTTTGTTACCTCTTTTGGA+AGG | - | tig0022765:29393-29412 | Msa1401820:intron | 35.0% |
| !! | TCTTTTGGAAGGAGATTTCA+GGG | - | tig0022765:29404-29423 | Msa1401820:CDS | 35.0% |
| ! | GTTTTTACAGTTATGTGTGG+AGG | + | tig0022765:29534-29553 | None:intergenic | 35.0% |
| AGAAGAACTGGAAAGTGAAA+AGG | + | tig0022765:29751-29770 | None:intergenic | 35.0% | |
| TGCGAAATTTACATCACTGA+TGG | - | tig0022765:29791-29810 | Msa1401820:intron | 35.0% | |
| ATGAACTTTAAGCTGCAACA+AGG | + | tig0022765:30119-30138 | None:intergenic | 35.0% | |
| !! | ATATGTTGAACTGGTTTGGA+TGG | - | tig0022765:30188-30207 | Msa1401820:CDS | 35.0% |
| ACTTCAGAGAATGTGAAAGA+AGG | - | tig0022765:30241-30260 | Msa1401820:CDS | 35.0% | |
| !! | GTAACTTAGACCACTTTTAG+TGG | + | tig0022765:30289-30308 | None:intergenic | 35.0% |
| !!! | ATTTACAGTTTTGAGGAAGG+TGG | - | tig0022765:30361-30380 | Msa1401820:CDS | 35.0% |
| TGTTTCCATTCAACACCATT+GGG | + | tig0022765:30442-30461 | None:intergenic | 35.0% | |
| ATGTTTCCATTCAACACCAT+TGG | + | tig0022765:30443-30462 | None:intergenic | 35.0% | |
| TTTATAGGCATGTGTATGTG+TGG | - | tig0022765:30804-30823 | Msa1401820:intron | 35.0% | |
| GGAACATTATGAGTCAAAGA+TGG | - | tig0022765:30877-30896 | Msa1401820:intron | 35.0% | |
| TATCTAATGCTTCATCTGGT+TGG | + | tig0022765:30937-30956 | None:intergenic | 35.0% | |
| ATGGTATCTAATGCTTCATC+TGG | + | tig0022765:30941-30960 | None:intergenic | 35.0% | |
| !! | ACCATTGCAATTAATGGACT+CGG | - | tig0022765:30956-30975 | Msa1401820:CDS | 35.0% |
| AAACTTTCTCAGGATTCACA+AGG | + | tig0022765:30982-31001 | None:intergenic | 35.0% | |
| CAGAATATCCTTGAAACTCT+TGG | - | tig0022765:31070-31089 | Msa1401820:intron | 35.0% | |
| ACTTGCAAGGAAATATCATC+AGG | - | tig0022765:31117-31136 | Msa1401820:CDS | 35.0% | |
| AAGGAAATATCATCAGGCAT+TGG | - | tig0022765:31123-31142 | Msa1401820:CDS | 35.0% | |
| TCTAGGAACTTTCCTGATAA+CGG | - | tig0022765:31157-31176 | Msa1401820:CDS | 35.0% | |
| CAACAAATGATTCCGTTATC+AGG | + | tig0022765:31172-31191 | None:intergenic | 35.0% | |
| !! | ACAATACAGACGGATTGTAT+AGG | - | tig0022765:31200-31219 | Msa1401820:intron | 35.0% |
| TTAGAGCTTCAGATGATTTC+TGG | - | tig0022765:31342-31361 | Msa1401820:intron | 35.0% | |
| TCACACAATTCACATTGCAT+CGG | - | tig0022765:31382-31401 | Msa1401820:intron | 35.0% | |
| TGAATTTATGCAGCCAGATT+GGG | - | tig0022765:31430-31449 | Msa1401820:intron | 35.0% | |
| ACATGAAACATATCCCAATC+TGG | + | tig0022765:31446-31465 | None:intergenic | 35.0% | |
| TGGTTCATAGAAAATGTGCT+AGG | - | tig0022765:31500-31519 | Msa1401820:intron | 35.0% | |
| AGAAAATGTGCTAGGATTTC+AGG | - | tig0022765:31508-31527 | Msa1401820:intron | 35.0% | |
| TCTTCAAAAGATTGAAGTCG+TGG | + | tig0022765:31858-31877 | None:intergenic | 35.0% | |
| GAAAATAAGCAATCCTTGGT+TGG | + | tig0022765:31931-31950 | None:intergenic | 35.0% | |
| CATTCATGTTCCATATCTTG+AGG | + | tig0022765:32075-32094 | None:intergenic | 35.0% | |
| TGGAACATGAATGACTATTC+TGG | - | tig0022765:32082-32101 | Msa1401820:CDS | 35.0% | |
| !! | AATGACTATTCTGGAGTTGT+TGG | - | tig0022765:32091-32110 | Msa1401820:CDS | 35.0% |
| !! | ATGACTATTCTGGAGTTGTT+GGG | - | tig0022765:32092-32111 | Msa1401820:CDS | 35.0% |
| ! | GTCATATTTTCCCATCTTTG+TGG | - | tig0022765:32265-32284 | Msa1401820:intron | 35.0% |
| ! | AAAGCTGGTGTAACCTTTTT+AGG | + | tig0022765:32317-32336 | None:intergenic | 35.0% |
| TGAAGTAGTCTATCTTCCAA+AGG | - | tig0022765:32381-32400 | Msa1401820:intron | 35.0% | |
| TTCATATTCTCGGGATTTCA+TGG | + | tig0022765:32425-32444 | None:intergenic | 35.0% | |
| ! | CCATTTGGTAATTCTTTCAC+AGG | + | tig0022765:32463-32482 | None:intergenic | 35.0% |
| CCTGTGAAAGAATTACCAAA+TGG | - | tig0022765:32460-32479 | Msa1401820:intron | 35.0% | |
| CAAGATGTTTAATTCAGGAG+GGG | - | tig0022765:32510-32529 | Msa1401820:CDS | 35.0% | |
| ! | AATGTTTCAATGAAAGTGCG+CGG | - | tig0022765:32571-32590 | Msa1401820:CDS | 35.0% |
| !! | GATTACTGTTGATTCAGAAG+AGG | - | tig0022765:32636-32655 | Msa1401820:CDS | 35.0% |
| TTCAGTTATGAGGAAGAATC+AGG | - | tig0022765:32664-32683 | Msa1401820:CDS | 35.0% | |
| TTATGAGGAAGAATCAGGAT+TGG | - | tig0022765:32669-32688 | Msa1401820:CDS | 35.0% | |
| CGGAGAAAGAGTTATATCAA+TGG | - | tig0022765:32713-32732 | Msa1401820:five_prime_UTR | 35.0% | |
| !! | GAACAAAGAGCATTGCTGAA+GGG | - | tig0022765:28588-28607 | Msa1401820:three_prime_UTR | 40.0% |
| TGTTGCTGATGGAAACTTGA+TGG | - | tig0022765:28701-28720 | Msa1401820:CDS | 40.0% | |
| !! | GATGGAAACTTGATGGTGTT+AGG | - | tig0022765:28708-28727 | Msa1401820:CDS | 40.0% |
| TCTGGTGGTTCTTTGATCAA+TGG | - | tig0022765:28780-28799 | Msa1401820:CDS | 40.0% | |
| ! | GTCTTTTCCGCTTCAAAATG+TGG | - | tig0022765:29229-29248 | Msa1401820:CDS | 40.0% |
| ! | TTTTCCGCTTCAAAATGTGG+TGG | - | tig0022765:29232-29251 | Msa1401820:CDS | 40.0% |
| !! | TCATCCACCACATTTTGAAG+CGG | + | tig0022765:29239-29258 | None:intergenic | 40.0% |
| GCAAAAACTGTGTCTCAAAG+GGG | + | tig0022765:29293-29312 | None:intergenic | 40.0% | |
| CATAAGGGTCGTGATATTGA+CGG | - | tig0022765:29324-29343 | Msa1401820:intron | 40.0% | |
| CTGAAATCTCCTTCCAAAAG+AGG | + | tig0022765:29405-29424 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGAAGGAGATTTC+AGG | - | tig0022765:29403-29422 | Msa1401820:CDS | 40.0% |
| ATTTCAGGGCTGTTCTTCAA+GGG | - | tig0022765:29418-29437 | Msa1401820:CDS | 40.0% | |
| CTGATGTGGAGGAATTTGAT+GGG | - | tig0022765:29639-29658 | Msa1401820:intron | 40.0% | |
| GGAATTTGATGGGACTCATT+TGG | - | tig0022765:29649-29668 | Msa1401820:intron | 40.0% | |
| !! | GGACTCATTTGGTGTTCATT+GGG | - | tig0022765:29660-29679 | Msa1401820:intron | 40.0% |
| !! | GACTCATTTGGTGTTCATTG+GGG | - | tig0022765:29661-29680 | Msa1401820:intron | 40.0% |
| AGATGCCAGATATGTTGAAC+TGG | - | tig0022765:30179-30198 | Msa1401820:CDS | 40.0% | |
| CCAAACCAGTTCAACATATC+TGG | + | tig0022765:30187-30206 | None:intergenic | 40.0% | |
| CCAGATATGTTGAACTGGTT+TGG | - | tig0022765:30184-30203 | Msa1401820:CDS | 40.0% | |
| !! | CACATTCTCTGAAGTGACAT+TGG | + | tig0022765:30236-30255 | None:intergenic | 40.0% |
| GTTTCCATTCAACACCATTG+GGG | + | tig0022765:30441-30460 | None:intergenic | 40.0% | |
| GGTAATGTGATGAATTCCCA+TGG | + | tig0022765:30669-30688 | None:intergenic | 40.0% | |
| GCACGCAATAACAGGATATT+GGG | - | tig0022765:30826-30845 | Msa1401820:intron | 40.0% | |
| CACGCAATAACAGGATATTG+GGG | - | tig0022765:30827-30846 | Msa1401820:intron | 40.0% | |
| TAATGCTTCATCTGGTTGGT+TGG | + | tig0022765:30933-30952 | None:intergenic | 40.0% | |
| TTTGACACCATCAATACCAG+CGG | + | tig0022765:31041-31060 | None:intergenic | 40.0% | |
| !! | GAAATATCATCAGGCATTGG+AGG | - | tig0022765:31126-31145 | Msa1401820:CDS | 40.0% |
| TGCATGAGTCACAATACAGA+CGG | - | tig0022765:31190-31209 | Msa1401820:intron | 40.0% | |
| !! | TACAGACGGATTGTATAGGT+AGG | - | tig0022765:31204-31223 | Msa1401820:intron | 40.0% |
| ! | TTGATGCAGTTCAAAGCGTT+CGG | - | tig0022765:31313-31332 | Msa1401820:CDS | 40.0% |
| TGTGAATTGTGTGAGATGCA+GGG | + | tig0022765:31376-31395 | None:intergenic | 40.0% | |
| ATGTGAATTGTGTGAGATGC+AGG | + | tig0022765:31377-31396 | None:intergenic | 40.0% | |
| GTGAATTTATGCAGCCAGAT+TGG | - | tig0022765:31429-31448 | Msa1401820:intron | 40.0% | |
| ATTTCAGAGTCTTCATCCGA+TGG | - | tig0022765:31558-31577 | Msa1401820:intron | 40.0% | |
| GAGGATGTCCTATTTATGTC+AGG | - | tig0022765:31611-31630 | Msa1401820:intron | 40.0% | |
| AAGAAGCTTGTACTTCCTGA+CGG | - | tig0022765:31874-31893 | Msa1401820:intron | 40.0% | |
| GCTCTTAATATAGAACCGTC+AGG | + | tig0022765:31892-31911 | None:intergenic | 40.0% | |
| ! | TTTTCTGATCCTGCTAGAGA+TGG | - | tig0022765:31946-31965 | Msa1401820:CDS | 40.0% |
| ! | ATCAGCTTGTTCTTTGCTCA+TGG | - | tig0022765:32031-32050 | Msa1401820:CDS | 40.0% |
| ATTGCAGTCTCCTCAAGATA+TGG | - | tig0022765:32062-32081 | Msa1401820:CDS | 40.0% | |
| !! | TGACTATTCTGGAGTTGTTG+GGG | - | tig0022765:32093-32112 | Msa1401820:CDS | 40.0% |
| ! | GTTGGGGTATTCAATTGTCA+AGG | - | tig0022765:32109-32128 | Msa1401820:CDS | 40.0% |
| GTATTCAATTGTCAAGGAGC+TGG | - | tig0022765:32115-32134 | Msa1401820:CDS | 40.0% | |
| CACAGTCACTGACATCATTA+GGG | - | tig0022765:32186-32205 | Msa1401820:intron | 40.0% | |
| TATCGACCATTTATCGACAG+TGG | - | tig0022765:32216-32235 | Msa1401820:intron | 40.0% | |
| TCTCGGGATTTCATGGTAAT+TGG | + | tig0022765:32418-32437 | None:intergenic | 40.0% | |
| ! | ATGTTTCAATGAAAGTGCGC+GGG | - | tig0022765:32572-32591 | Msa1401820:CDS | 40.0% |
| !! | CTGATGAATAAGCACCGAAA+AGG | + | tig0022765:32603-32622 | None:intergenic | 40.0% |
| !! | TACTGTTGATTCAGAAGAGG+TGG | - | tig0022765:32639-32658 | Msa1401820:CDS | 40.0% |
| AGAGGTGGAATTCAGTTATG+AGG | - | tig0022765:32654-32673 | Msa1401820:CDS | 40.0% | |
| GACTATAGATTTGAGTGTGC+CGG | - | tig0022765:32693-32712 | Msa1401820:exon | 40.0% | |
| !! | GGAACAAAGAGCATTGCTGA+AGG | - | tig0022765:28587-28606 | Msa1401820:three_prime_UTR | 45.0% |
| GCAGGAATATCTGTTGCTGA+TGG | - | tig0022765:28690-28709 | Msa1401820:CDS | 45.0% | |
| !! | CTTGATGGTGTTAGGGAAGA+AGG | - | tig0022765:28716-28735 | Msa1401820:CDS | 45.0% |
| GTTCTTGTTACTCCTGCTTC+TGG | - | tig0022765:28762-28781 | Msa1401820:CDS | 45.0% | |
| ATCAAAGAACCACCAGAAGC+AGG | + | tig0022765:28777-28796 | None:intergenic | 45.0% | |
| ACATACTCAAGCTTGCCAAC+AGG | + | tig0022765:28855-28874 | None:intergenic | 45.0% | |
| ! | AGGATTAAGGTGACCCCTTT+TGG | - | tig0022765:29106-29125 | Msa1401820:CDS | 45.0% |
| ! | TGGTGGATGACTCAGAGAAT+GGG | - | tig0022765:29249-29268 | Msa1401820:CDS | 45.0% |
| ACTCAGAGAATGGGTAACTG+TGG | - | tig0022765:29258-29277 | Msa1401820:CDS | 45.0% | |
| ! | CCAAGATAGTTCTACCTACG+CGG | - | tig0022765:29371-29390 | Msa1401820:intron | 45.0% |
| AAGAGGTAACAAAACCGCGT+AGG | + | tig0022765:29388-29407 | None:intergenic | 45.0% | |
| !!! | CGCGGTTTTGTTACCTCTTT+TGG | - | tig0022765:29389-29408 | Msa1401820:intron | 45.0% |
| GATTTCAGGGCTGTTCTTCA+AGG | - | tig0022765:29417-29436 | Msa1401820:CDS | 45.0% | |
| ! | ACTAAACCATCGAGTTGCCT+AGG | - | tig0022765:29552-29571 | Msa1401820:intron | 45.0% |
| TTTGCTGGGTGCATGATTGT+AGG | - | tig0022765:29611-29630 | Msa1401820:intron | 45.0% | |
| GATTGTAGGATGTCCTGATG+TGG | - | tig0022765:29625-29644 | Msa1401820:intron | 45.0% | |
| CCATCAAATTCCTCCACATC+AGG | + | tig0022765:29641-29660 | None:intergenic | 45.0% | |
| CCTGATGTGGAGGAATTTGA+TGG | - | tig0022765:29638-29657 | Msa1401820:intron | 45.0% | |
| !! | GGGACTCATTTGGTGTTCAT+TGG | - | tig0022765:29659-29678 | Msa1401820:intron | 45.0% |
| TTGTCATCGCGAGAGAAAGA+AGG | - | tig0022765:30049-30068 | Msa1401820:intron | 45.0% | |
| !! | ACTGGTTTGGATGGTGTACA+TGG | - | tig0022765:30197-30216 | Msa1401820:CDS | 45.0% |
| !! | CTGGTTTGGATGGTGTACAT+GGG | - | tig0022765:30198-30217 | Msa1401820:CDS | 45.0% |
| TGGATGGCAATCTGTTAGCA+TGG | - | tig0022765:30414-30433 | Msa1401820:CDS | 45.0% | |
| CAAATTCCAGAAAGACGGCA+AGG | - | tig0022765:30619-30638 | Msa1401820:intron | 45.0% | |
| TGTGATGAATTCCCATGGCA+GGG | + | tig0022765:30664-30683 | None:intergenic | 45.0% | |
| ATGTGATGAATTCCCATGGC+AGG | + | tig0022765:30665-30684 | None:intergenic | 45.0% | |
| TATGTGTGGCACGCAATAAC+AGG | - | tig0022765:30818-30837 | Msa1401820:intron | 45.0% | |
| GGCACGCAATAACAGGATAT+TGG | - | tig0022765:30825-30844 | Msa1401820:intron | 45.0% | |
| GCAATAACAGGATATTGGGG+TGG | - | tig0022765:30830-30849 | Msa1401820:intron | 45.0% | |
| ! | TATTGGGGTGGTGTTAAACC+TGG | - | tig0022765:30842-30861 | Msa1401820:intron | 45.0% |
| ! | ATTGGGGTGGTGTTAAACCT+GGG | - | tig0022765:30843-30862 | Msa1401820:intron | 45.0% |
| GGTGTTAAACCTGGGATTAG+TGG | - | tig0022765:30851-30870 | Msa1401820:intron | 45.0% | |
| ! | TAAACCTGGGATTAGTGGCA+TGG | - | tig0022765:30856-30875 | Msa1401820:intron | 45.0% |
| TGACTCCAGGAGATGAGATA+GGG | + | tig0022765:30907-30926 | None:intergenic | 45.0% | |
| TTGACTCCAGGAGATGAGAT+AGG | + | tig0022765:30908-30927 | None:intergenic | 45.0% | |
| GCCGAGTCCATTAATTGCAA+TGG | + | tig0022765:30960-30979 | None:intergenic | 45.0% | |
| ATCCTTGAAACTCTTGGAGC+AGG | - | tig0022765:31076-31095 | Msa1401820:intron | 45.0% | |
| CTGGCTGCATAAATTCACCA+AGG | + | tig0022765:31427-31446 | None:intergenic | 45.0% | |
| GCAGCATGATATTCAGCCAT+CGG | + | tig0022765:31577-31596 | None:intergenic | 45.0% | |
| AAGATTGAAGTCGTGGTGTC+CGG | + | tig0022765:31851-31870 | None:intergenic | 45.0% | |
| ATCCTGCTAGAGATGGAAAG+AGG | - | tig0022765:31953-31972 | Msa1401820:CDS | 45.0% | |
| TACCTCTTTCCATCTCTAGC+AGG | + | tig0022765:31958-31977 | None:intergenic | 45.0% | |
| TCAATTGTCAAGGAGCTGGT+TGG | - | tig0022765:32119-32138 | Msa1401820:CDS | 45.0% | |
| GCACAGTCACTGACATCATT+AGG | - | tig0022765:32185-32204 | Msa1401820:intron | 45.0% | |
| CATCTGCCACTGTCGATAAA+TGG | + | tig0022765:32225-32244 | None:intergenic | 45.0% | |
| CGACAGTGGCAGATGATAAA+TGG | - | tig0022765:32230-32249 | Msa1401820:intron | 45.0% | |
| GTGGCAGATGATAAATGGAC+AGG | - | tig0022765:32235-32254 | Msa1401820:intron | 45.0% | |
| GGAGCAAATTTGGCACCATT+TGG | + | tig0022765:32478-32497 | None:intergenic | 45.0% | |
| ! | GGTGCCAAATTTGCTCCTAT+TGG | - | tig0022765:32481-32500 | Msa1401820:intron | 45.0% |
| ! | TCGGTGCTTATTCATCAGCT+CGG | - | tig0022765:32605-32624 | Msa1401820:CDS | 45.0% |
| GAAAAGATGACTGTAGGGGC+AGG | - | tig0022765:28672-28691 | Msa1401820:CDS | 50.0% | |
| !! | AGGGAAGAAGGTTCTGAGTC+AGG | - | tig0022765:28728-28747 | Msa1401820:CDS | 50.0% |
| CTTGTTACTCCTGCTTCTGG+TGG | - | tig0022765:28765-28784 | Msa1401820:CDS | 50.0% | |
| AGTCGCAGAGTCTTTCCTGT+TGG | - | tig0022765:28837-28856 | Msa1401820:CDS | 50.0% | |
| !! | GTGGTGGATGACTCAGAGAA+TGG | - | tig0022765:29248-29267 | Msa1401820:CDS | 50.0% |
| AAGGGTCGTGATATTGACGG+AGG | - | tig0022765:29327-29346 | Msa1401820:intron | 50.0% | |
| AGGGTCGTGATATTGACGGA+GGG | - | tig0022765:29328-29347 | Msa1401820:intron | 50.0% | |
| CCGCGTAGGTAGAACTATCT+TGG | + | tig0022765:29374-29393 | None:intergenic | 50.0% | |
| TGTGATCCTAGGCAACTCGA+TGG | + | tig0022765:29561-29580 | None:intergenic | 50.0% | |
| AGTCTCAGCACTGTGATCCT+AGG | + | tig0022765:29572-29591 | None:intergenic | 50.0% | |
| TGTAGGATGTCCTGATGTGG+AGG | - | tig0022765:29628-29647 | Msa1401820:intron | 50.0% | |
| !! | CATTTGGTGTTCATTGGGGC+TGG | - | tig0022765:29665-29684 | Msa1401820:intron | 50.0% |
| TCTGTTAGCATGGACCCCAA+TGG | - | tig0022765:30424-30443 | Msa1401820:CDS | 50.0% | |
| ! | TGGACCCCAATGGTGTTGAA+TGG | - | tig0022765:30434-30453 | Msa1401820:CDS | 50.0% |
| TTCCAGAAAGACGGCAAGGA+AGG | - | tig0022765:30623-30642 | Msa1401820:intron | 50.0% | |
| AAGACGGCAAGGAAGGTCAT+CGG | - | tig0022765:30630-30649 | Msa1401820:intron | 50.0% | |
| CAAGGAAGGTCATCGGATAG+AGG | - | tig0022765:30637-30656 | Msa1401820:intron | 50.0% | |
| TGTTCCATGCCACTAATCCC+AGG | + | tig0022765:30863-30882 | None:intergenic | 50.0% | |
| GCTTTCCCTATCTCATCTCC+TGG | - | tig0022765:30899-30918 | Msa1401820:CDS | 50.0% | |
| CAGCGGATGCTAGATATGAG+TGG | + | tig0022765:31024-31043 | None:intergenic | 50.0% | |
| CACTCATATCTAGCATCCGC+TGG | - | tig0022765:31022-31041 | Msa1401820:intron | 50.0% | |
| ! | CTAGCATCCGCTGGTATTGA+TGG | - | tig0022765:31031-31050 | Msa1401820:intron | 50.0% |
| GTCCTGCTCCAAGAGTTTCA+AGG | + | tig0022765:31081-31100 | None:intergenic | 50.0% | |
| GAAACTCTTGGAGCAGGACA+TGG | - | tig0022765:31082-31101 | Msa1401820:intron | 50.0% | |
| !! | CATTGGAGGCATCGATCTCT+AGG | - | tig0022765:31140-31159 | Msa1401820:CDS | 50.0% |
| ATGTTGTGTAGCGACAAGCC+CGG | - | tig0022765:31829-31848 | Msa1401820:intron | 50.0% | |
| AGATTGAAGTCGTGGTGTCC+GGG | + | tig0022765:31850-31869 | None:intergenic | 50.0% | |
| ACTTCCAGGAAGACCAACCA+AGG | - | tig0022765:31915-31934 | Msa1401820:CDS | 50.0% | |
| !! | CAATCCTTGGTTGGTCTTCC+TGG | + | tig0022765:31922-31941 | None:intergenic | 50.0% |
| CTGGATTCTCGTCGTGGATA+AGG | + | tig0022765:32165-32184 | None:intergenic | 50.0% | |
| CTTATCCACGACGAGAATCC+AGG | - | tig0022765:32163-32182 | Msa1401820:intron | 50.0% | |
| ATGATGTCAGTGACTGTGCC+TGG | + | tig0022765:32184-32203 | None:intergenic | 50.0% | |
| GGGTCGTGATATTGACGGAG+GGG | - | tig0022765:29329-29348 | Msa1401820:intron | 55.0% | |
| ATTGACGGAGGGGTTGACAG+TGG | - | tig0022765:29339-29358 | Msa1401820:intron | 55.0% | |
| GACCTTCCTTGCCGTCTTTC+TGG | + | tig0022765:30628-30647 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGGACTTGACTCC+AGG | + | tig0022765:30920-30939 | None:intergenic | 55.0% |
| ACTCTTGGAGCAGGACATGG+TGG | - | tig0022765:31085-31104 | Msa1401820:intron | 55.0% | |
| CTCTTGGAGCAGGACATGGT+GGG | - | tig0022765:31086-31105 | Msa1401820:intron | 55.0% | |
| GTGGGAGGGTGAAACTTGCA+AGG | - | tig0022765:31104-31123 | Msa1401820:CDS | 55.0% | |
| GTGTGAGATGCAGGGTCTCT+TGG | + | tig0022765:31368-31387 | None:intergenic | 55.0% | |
| CATGCTGCTGCAAGAGCAGT+TGG | - | tig0022765:31589-31608 | Msa1401820:intron | 55.0% | |
| ! | GGAGCTGGTTGGTGCAAAGT+TGG | - | tig0022765:32130-32149 | Msa1401820:CDS | 55.0% |
| ! | TCAATGAAAGTGCGCGGGTG+TGG | - | tig0022765:32577-32596 | Msa1401820:CDS | 55.0% |
| TCGGATAGAGGACCCTGCCA+TGG | - | tig0022765:30649-30668 | Msa1401820:intron | 60.0% | |
| CGGATAGAGGACCCTGCCAT+GGG | - | tig0022765:30650-30669 | Msa1401820:intron | 60.0% | |
| ! | TTGGAGCAGGACATGGTGGG+AGG | - | tig0022765:31089-31108 | Msa1401820:intron | 60.0% |
| ! | TGGAGCAGGACATGGTGGGA+GGG | - | tig0022765:31090-31109 | Msa1401820:intron | 60.0% |
| GCTGCTGCAAGAGCAGTTGG+AGG | - | tig0022765:31592-31611 | Msa1401820:intron | 60.0% | |
| CTGTGCCTGGATTCTCGTCG+TGG | + | tig0022765:32171-32190 | None:intergenic | 60.0% | |
| ! | GTGCGCGGGTGTGGCCTTTT+CGG | - | tig0022765:32586-32605 | Msa1401820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022765 | gene | 28559 | 32815 | 28559 | ID=Msa1401820;Name=Msa1401820 |
| tig0022765 | mRNA | 28559 | 32815 | 28559 | ID=Msa1401820-mRNA-1;Parent=Msa1401820;Name=Msa1401820-mRNA-1;_AED=0.12;_eAED=0.12;_QI=119|1|1|1|1|1|13|59|760 |
| tig0022765 | exon | 28559 | 28994 | 28559 | ID=Msa1401820-mRNA-1:exon:18625;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 29088 | 29305 | 29088 | ID=Msa1401820-mRNA-1:exon:18624;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 29400 | 29534 | 29400 | ID=Msa1401820-mRNA-1:exon:18623;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 29742 | 29809 | 29742 | ID=Msa1401820-mRNA-1:exon:18622;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 29911 | 30052 | 29911 | ID=Msa1401820-mRNA-1:exon:18621;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 30153 | 30563 | 30153 | ID=Msa1401820-mRNA-1:exon:18620;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 30657 | 30791 | 30657 | ID=Msa1401820-mRNA-1:exon:18619;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 30898 | 31005 | 30898 | ID=Msa1401820-mRNA-1:exon:18618;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 31102 | 31193 | 31102 | ID=Msa1401820-mRNA-1:exon:18617;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 31304 | 31352 | 31304 | ID=Msa1401820-mRNA-1:exon:18616;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 31651 | 31741 | 31651 | ID=Msa1401820-mRNA-1:exon:18615;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 31897 | 32162 | 31897 | ID=Msa1401820-mRNA-1:exon:18614;Parent=Msa1401820-mRNA-1 |
| tig0022765 | exon | 32506 | 32815 | 32506 | ID=Msa1401820-mRNA-1:exon:18613;Parent=Msa1401820-mRNA-1 |
| tig0022765 | five_prime_UTR | 32697 | 32815 | 32697 | ID=Msa1401820-mRNA-1:five_prime_utr;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 32506 | 32696 | 32506 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 31897 | 32162 | 31897 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 31651 | 31741 | 31651 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 31304 | 31352 | 31304 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 31102 | 31193 | 31102 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 30898 | 31005 | 30898 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 30657 | 30791 | 30657 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 30153 | 30563 | 30153 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 29911 | 30052 | 29911 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 29742 | 29809 | 29742 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 29400 | 29534 | 29400 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 29088 | 29305 | 29088 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | CDS | 28618 | 28994 | 28618 | ID=Msa1401820-mRNA-1:cds;Parent=Msa1401820-mRNA-1 |
| tig0022765 | three_prime_UTR | 28559 | 28617 | 28559 | ID=Msa1401820-mRNA-1:three_prime_utr;Parent=Msa1401820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
