Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864610 | XP_024639978.1 | 97.500 | 760 | 19 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864610 | sp|Q84VX0|RFS1_ARATH | 71.184 | 760 | 210 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864610 | G7K4U6 | 97.500 | 760 | 19 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0788250 | Msa0864610 | 0.923775 | 1.701144e-89 | -8.615850e-47 |
| Msa0825420 | Msa0864610 | 0.850244 | 1.924428e-60 | -8.615850e-47 |
| Msa0404870 | Msa0864610 | -0.826208 | 3.077512e-54 | -8.615850e-47 |
| Msa0436900 | Msa0864610 | -0.814302 | 1.650661e-51 | -8.615850e-47 |
| Msa0358710 | Msa0864610 | -0.818617 | 1.785373e-52 | -8.615850e-47 |
| Msa0864610 | Msa0945040 | 0.910068 | 2.829493e-82 | -8.615850e-47 |
| Msa0864610 | Msa1220710 | -0.806129 | 9.555625e-50 | -8.615850e-47 |
| Msa0864610 | Msa1265660 | -0.806574 | 7.698597e-50 | -8.615850e-47 |
| Msa0864610 | Msa1401820 | 0.985052 | 2.215958e-162 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864610 | MtrunA17_Chr5g0447201 | 97.500 | 760 | 19 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1541 |
| Msa0864610 | MtrunA17_Chr1g0173521 | 58.947 | 760 | 292 | 2 | 1 | 760 | 58 | 797 | 0.0 | 940 |
| Msa0864610 | MtrunA17_Chr4g0064311 | 53.785 | 753 | 319 | 6 | 1 | 750 | 98 | 824 | 0.0 | 840 |
| Msa0864610 | MtrunA17_Chr7g0257731 | 58.966 | 619 | 226 | 4 | 165 | 760 | 1 | 614 | 0.0 | 771 |
| Msa0864610 | MtrunA17_Chr3g0116641 | 47.059 | 748 | 382 | 5 | 1 | 744 | 1 | 738 | 0.0 | 721 |
| Msa0864610 | MtrunA17_Chr6g0449521 | 39.119 | 772 | 424 | 15 | 7 | 756 | 35 | 782 | 0.0 | 541 |
| Msa0864610 | MtrunA17_Chr4g0058701 | 39.689 | 771 | 387 | 16 | 7 | 735 | 22 | 756 | 0.0 | 538 |
| Msa0864610 | MtrunA17_Chr3g0117141 | 38.693 | 765 | 419 | 12 | 7 | 742 | 28 | 771 | 4.34e-179 | 532 |
| Msa0864610 | MtrunA17_Chr7g0267991 | 37.684 | 475 | 264 | 8 | 291 | 747 | 384 | 844 | 3.22e-94 | 312 |
| Msa0864610 | MtrunA17_Chr7g0267991 | 34.818 | 247 | 137 | 3 | 42 | 282 | 71 | 299 | 1.28e-40 | 160 |
| Msa0864610 | MtrunA17_Chr5g0427081 | 96.454 | 141 | 5 | 0 | 520 | 660 | 10 | 150 | 6.27e-92 | 284 |
| Msa0864610 | MtrunA17_Chr8g0380141 | 43.709 | 302 | 157 | 4 | 296 | 587 | 380 | 678 | 1.02e-77 | 264 |
| Msa0864610 | MtrunA17_Chr8g0380141 | 34.553 | 246 | 139 | 4 | 42 | 282 | 70 | 298 | 1.27e-40 | 159 |
| Msa0864610 | MtrunA17_Chr1g0201161 | 41.883 | 308 | 164 | 5 | 284 | 579 | 370 | 674 | 2.14e-70 | 248 |
| Msa0864610 | MtrunA17_Chr1g0201161 | 33.865 | 251 | 134 | 4 | 42 | 282 | 75 | 303 | 7.46e-39 | 155 |
| Msa0864610 | MtrunA17_Chr1g0201161 | 29.885 | 174 | 114 | 4 | 570 | 739 | 734 | 903 | 1.82e-13 | 74.3 |
| Msa0864610 | MtrunA17_Chr7g0270181 | 36.975 | 357 | 204 | 6 | 401 | 747 | 4 | 349 | 1.06e-64 | 219 |
| Msa0864610 | MtrunA17_Chr7g0257741 | 56.863 | 153 | 56 | 2 | 1 | 152 | 1 | 144 | 4.53e-50 | 172 |
| Msa0864610 | MtrunA17_Chr3g0139771 | 78.261 | 69 | 15 | 0 | 681 | 749 | 1 | 69 | 5.85e-16 | 73.6 |
| Msa0864610 | MtrunA17_Chr8g0380131 | 38.043 | 92 | 54 | 1 | 642 | 733 | 3 | 91 | 1.46e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864610 | AT1G55740.1 | 71.184 | 760 | 210 | 4 | 1 | 758 | 1 | 753 | 0.0 | 1119 |
| Msa0864610 | AT3G57520.1 | 59.463 | 782 | 282 | 4 | 1 | 758 | 1 | 771 | 0.0 | 991 |
| Msa0864610 | AT3G57520.2 | 63.118 | 667 | 235 | 2 | 1 | 667 | 1 | 656 | 0.0 | 910 |
| Msa0864610 | AT5G20250.4 | 54.618 | 747 | 321 | 7 | 1 | 744 | 96 | 827 | 0.0 | 851 |
| Msa0864610 | AT5G20250.3 | 54.618 | 747 | 321 | 7 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0864610 | AT5G20250.1 | 54.618 | 747 | 321 | 7 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0864610 | AT5G20250.2 | 54.618 | 747 | 321 | 7 | 1 | 744 | 1 | 732 | 0.0 | 850 |
| Msa0864610 | AT3G57520.3 | 63.028 | 568 | 196 | 3 | 1 | 568 | 1 | 554 | 0.0 | 773 |
| Msa0864610 | AT5G40390.1 | 38.521 | 771 | 423 | 16 | 9 | 748 | 24 | 774 | 7.60e-177 | 526 |
| Msa0864610 | AT4G01970.1 | 37.634 | 465 | 268 | 10 | 296 | 742 | 398 | 858 | 7.82e-97 | 320 |
| Msa0864610 | AT4G01970.1 | 33.544 | 316 | 160 | 7 | 21 | 305 | 49 | 345 | 2.93e-42 | 166 |
| Msa0864610 | AT4G01970.2 | 37.634 | 465 | 268 | 10 | 296 | 742 | 445 | 905 | 2.73e-96 | 320 |
| Msa0864610 | AT4G01970.2 | 33.544 | 316 | 160 | 7 | 21 | 305 | 96 | 392 | 4.03e-42 | 166 |
Find 217 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTCCTTGCCGTCTTTC+TGG | 0.066893 | 5_4:+65057439 | None:intergenic |
| TTAGAGCTTCAGATGATTTC+TGG | 0.146587 | 5_4:-65056723 | Msa0864610:CDS |
| TCTCGGGATTTCATGGTAAT+TGG | 0.169806 | 5_4:+65055650 | None:intergenic |
| TAAACCAATAGGAGCAAATT+TGG | 0.190235 | 5_4:+65055580 | None:intergenic |
| TTAGATACCATTGCAATTAA+TGG | 0.192004 | 5_4:-65057115 | Msa0864610:CDS |
| CAATCCTTGGTTGGTCTTCC+TGG | 0.200624 | 5_4:+65056146 | None:intergenic |
| AGATTTCAGGGCTGTTCTTC+AGG | 0.254721 | 5_4:-65058685 | Msa0864610:CDS |
| GTTCTTGTTACTCCTGCTTC+TGG | 0.263308 | 5_4:-65059339 | Msa0864610:CDS |
| AATCATTACCTGACATAAAT+AGG | 0.266033 | 5_4:+65056446 | None:intergenic |
| GGGACTCATTTGGTGTTCAT+TGG | 0.269955 | 5_4:-65058442 | Msa0864610:CDS |
| GTTTCTTTCTCATTTGCATT+TGG | 0.276272 | 5_4:-65059535 | Msa0864610:five_prime_UTR |
| TTGATCAATGGTGCATTTCT+TGG | 0.278920 | 5_4:-65059309 | Msa0864610:CDS |
| GGACTCATTTGGTGTTCATT+GGG | 0.286060 | 5_4:-65058441 | Msa0864610:CDS |
| GAGTTTAGTTCCGAATTTAA+TGG | 0.294252 | 5_4:-65055524 | Msa0864610:CDS |
| CGACAGTGGCAGATGATAAA+TGG | 0.300808 | 5_4:-65055835 | Msa0864610:CDS |
| CAACAAATGATTCCGTTATC+AGG | 0.308551 | 5_4:+65056896 | None:intergenic |
| GCACGCAATAACAGGATATT+GGG | 0.318440 | 5_4:-65057239 | Msa0864610:CDS |
| TTCATATTCTCGGGATTTCA+TGG | 0.321029 | 5_4:+65055643 | None:intergenic |
| GCACAGTCACTGACATCATT+AGG | 0.326937 | 5_4:-65055880 | Msa0864610:CDS |
| GGTGCCAAATTTGCTCCTAT+TGG | 0.331580 | 5_4:-65055584 | Msa0864610:CDS |
| TTAATCAAGATGTTTAATTC+AGG | 0.335147 | 5_4:-65055560 | Msa0864610:CDS |
| CCAAACCAGTTCAACATATC+TGG | 0.338607 | 5_4:+65057917 | None:intergenic |
| ATTTACAACTCCATTAAATT+CGG | 0.352036 | 5_4:+65055514 | None:intergenic |
| TCTGGTGGTTCTTTGATCAA+TGG | 0.352616 | 5_4:-65059321 | Msa0864610:CDS |
| CATCTGCCACTGTCGATAAA+TGG | 0.356356 | 5_4:+65055843 | None:intergenic |
| GGCACGCAATAACAGGATAT+TGG | 0.359380 | 5_4:-65057240 | Msa0864610:CDS |
| CAGAATATCCTTGAAACTCT+TGG | 0.359438 | 5_4:-65056995 | Msa0864610:CDS |
| ATATTAAGAGCTAAACTTCC+AGG | 0.366671 | 5_4:-65056164 | Msa0864610:CDS |
| TGGAACATGAATGACTATTC+TGG | 0.373902 | 5_4:-65055983 | Msa0864610:CDS |
| CATTTGGTGTTCATTGGGGC+TGG | 0.375289 | 5_4:-65058436 | Msa0864610:CDS |
| TGGTGTTTCTTCTGATCAAA+AGG | 0.383403 | 5_4:-65059289 | Msa0864610:CDS |
| GGAGCAAATTTGGCACCATT+TGG | 0.387548 | 5_4:+65055590 | None:intergenic |
| CTGGATTCTCGTCGTGGATA+AGG | 0.394790 | 5_4:+65055903 | None:intergenic |
| TTCAGTTATGAGGAAGAATC+AGG | 0.395624 | 5_4:-65055401 | Msa0864610:CDS |
| CTAGCATCCGCTGGTATTGA+TGG | 0.397699 | 5_4:-65057034 | Msa0864610:CDS |
| CATTGATATAACTCTTTCTC+CGG | 0.410663 | 5_4:+65055353 | None:intergenic |
| CTTGATGGTGTTAGGGAAGA+AGG | 0.410849 | 5_4:-65059385 | Msa0864610:CDS |
| GCATTTGTTATGACTTCATA+AGG | 0.411544 | 5_4:+65058406 | None:intergenic |
| TTGACTCCAGGAGATGAGAT+AGG | 0.414473 | 5_4:+65057160 | None:intergenic |
| ATGGCAGTCTCCTCAAGATA+TGG | 0.415061 | 5_4:-65056003 | Msa0864610:intron |
| AGCAAGAACTGTGTCTCAAA+GGG | 0.415408 | 5_4:+65058810 | None:intergenic |
| TGTTTCCATTCAACACCATT+GGG | 0.415542 | 5_4:+65057625 | None:intergenic |
| AAGATTGAAGTCGTGGTGTC+CGG | 0.416723 | 5_4:+65056217 | None:intergenic |
| GTGAATTTATGCAGCCAGAT+TGG | 0.418742 | 5_4:-65056636 | Msa0864610:CDS |
| TGAATTTATGCAGCCAGATT+GGG | 0.419847 | 5_4:-65056635 | Msa0864610:CDS |
| CCAGATATGTTGAACTGGTT+TGG | 0.421533 | 5_4:-65057917 | Msa0864610:CDS |
| GCTTTCCCTATCTCATCTCC+TGG | 0.423799 | 5_4:-65057166 | Msa0864610:CDS |
| ATTGGAATAGAAACATCCTT+TGG | 0.425085 | 5_4:+65055668 | None:intergenic |
| GATGGAAACTTGATGGTGTT+AGG | 0.426147 | 5_4:-65059393 | Msa0864610:CDS |
| GGAATTTGATGGGACTCATT+TGG | 0.432327 | 5_4:-65058452 | Msa0864610:CDS |
| TAATGCTTCATCTGGTTGGT+TGG | 0.433017 | 5_4:+65057135 | None:intergenic |
| AGGGAAGAAGGTTCTGAGTC+AGG | 0.435038 | 5_4:-65059373 | Msa0864610:CDS |
| TTGATGCAGTTCAAAGCGTT+CGG | 0.437922 | 5_4:-65056752 | Msa0864610:intron |
| CCATTTGGTAATTCTTTCAC+AGG | 0.443895 | 5_4:+65055605 | None:intergenic |
| CACAGTCACTGACATCATTA+GGG | 0.443981 | 5_4:-65055879 | Msa0864610:CDS |
| TACCTCTTTCCATCTCTAGC+AGG | 0.444123 | 5_4:+65056110 | None:intergenic |
| AACATCTTGATTAAACCAAT+AGG | 0.450743 | 5_4:+65055569 | None:intergenic |
| AATGACTATTCTGGAGTTGT+TGG | 0.457081 | 5_4:-65055974 | Msa0864610:CDS |
| TATGTGTGGCACGCAATAAC+AGG | 0.457665 | 5_4:-65057247 | Msa0864610:CDS |
| ATGACTATTCTGGAGTTGTT+GGG | 0.459794 | 5_4:-65055973 | Msa0864610:CDS |
| CTTAAAACATACCACAAAGA+TGG | 0.460266 | 5_4:+65055789 | None:intergenic |
| AGATGCCAGATATGTTGAAC+TGG | 0.461398 | 5_4:-65057922 | Msa0864610:CDS |
| ATGTGAATTGTGTGAGATGC+AGG | 0.463395 | 5_4:+65056691 | None:intergenic |
| GGTGTTAAACCTGGGATTAG+TGG | 0.464175 | 5_4:-65057214 | Msa0864610:CDS |
| GGTTGGTTGGACTTGACTCC+AGG | 0.465627 | 5_4:+65057148 | None:intergenic |
| CACATTCTCTGAAGTGACAT+TGG | 0.467536 | 5_4:+65057868 | None:intergenic |
| TCTTTCCTTGAAAATTCAAA+AGG | 0.468493 | 5_4:+65059445 | None:intergenic |
| GATTTCAGGGCTGTTCTTCA+GGG | 0.470284 | 5_4:-65058684 | Msa0864610:CDS |
| TGTTGCTGATGGAAACTTGA+TGG | 0.470783 | 5_4:-65059400 | Msa0864610:CDS |
| ATGTTTCCATTCAACACCAT+TGG | 0.474051 | 5_4:+65057624 | None:intergenic |
| CTTATCCACGACGAGAATCC+AGG | 0.474066 | 5_4:-65055902 | Msa0864610:CDS |
| ATGAATCACAGAACAGAGAA+AGG | 0.474977 | 5_4:+65059483 | None:intergenic |
| TCAATGAAAGTGCGCGGGTG+TGG | 0.475072 | 5_4:-65055488 | Msa0864610:CDS |
| AGTCGCAGAGTCTTTCCTAT+TGG | 0.476411 | 5_4:-65059264 | Msa0864610:CDS |
| CTGAAATCTCCTTCCAAAAG+AGG | 0.477676 | 5_4:+65058699 | None:intergenic |
| ATGATGTCAGTGACTGTGCC+TGG | 0.481533 | 5_4:+65055884 | None:intergenic |
| CCATCAAATTCCTCCACATC+AGG | 0.481977 | 5_4:+65058463 | None:intergenic |
| ACAATACAGACGGATTGTAT+AGG | 0.482731 | 5_4:-65056865 | Msa0864610:intron |
| ACATGAAACATATCCCAATC+TGG | 0.482945 | 5_4:+65056622 | None:intergenic |
| ATGGTATCTAATGCTTCATC+TGG | 0.485206 | 5_4:+65057127 | None:intergenic |
| ACATACTCAAGCTTGCCAAT+AGG | 0.485952 | 5_4:+65059249 | None:intergenic |
| GGAGCTGGTTGGTGCAAAGT+TGG | 0.487373 | 5_4:-65055935 | Msa0864610:CDS |
| ATCAGAAAATAAGCAATCCT+TGG | 0.487411 | 5_4:+65056133 | None:intergenic |
| CATGCTGCTGCAAGAGCAGT+TGG | 0.488415 | 5_4:-65056476 | Msa0864610:CDS |
| GAGGATGTCCTATTTATGTC+AGG | 0.491039 | 5_4:-65056454 | Msa0864610:intron |
| TTTCAAGGAAAGATGACTGT+AGG | 0.497121 | 5_4:-65059435 | Msa0864610:exon |
| AGATTGAAGTCGTGGTGTCC+GGG | 0.497726 | 5_4:+65056218 | None:intergenic |
| CCTGATGTGGAGGAATTTGA+TGG | 0.498094 | 5_4:-65058463 | Msa0864610:CDS |
| TATCTAATGCTTCATCTGGT+TGG | 0.499999 | 5_4:+65057131 | None:intergenic |
| AAGTTTGTCATAATTGATGA+TGG | 0.501793 | 5_4:-65057670 | Msa0864610:CDS |
| ATCAAGATGTTTAATTCAGG+AGG | 0.506929 | 5_4:-65055557 | Msa0864610:CDS |
| ATCCTTGAAACTCTTGGAGC+AGG | 0.507848 | 5_4:-65056989 | Msa0864610:CDS |
| AGAGGTGGAATTCAGTTATG+AGG | 0.508775 | 5_4:-65055411 | Msa0864610:CDS |
| ACTGGTTTGGATGGTGTACA+TGG | 0.510270 | 5_4:-65057904 | Msa0864610:CDS |
| TTCAAGGAAAGATGACTGTA+GGG | 0.510895 | 5_4:-65059434 | Msa0864610:exon |
| ATGTGATGAATTCCCATGGC+AGG | 0.510914 | 5_4:+65057402 | None:intergenic |
| CATTGGAGGCATCGATCACT+AGG | 0.511592 | 5_4:-65056925 | Msa0864610:CDS |
| GTGTGAGATGCAGGGTCTCT+TGG | 0.512827 | 5_4:+65056700 | None:intergenic |
| GCTCTTAATATAGAACCGTC+AGG | 0.513998 | 5_4:+65056176 | None:intergenic |
| ACTAGGAACTTTCCTGATAA+CGG | 0.516259 | 5_4:-65056908 | Msa0864610:CDS |
| ATCAAAGAACCACCAGAAGC+AGG | 0.518612 | 5_4:+65059327 | None:intergenic |
| ACTTGCAAGGAAATATCATC+AGG | 0.521049 | 5_4:-65056948 | Msa0864610:CDS |
| TACTGTTGATTCAGAAGAGG+TGG | 0.521451 | 5_4:-65055426 | Msa0864610:CDS |
| TTCCAGAAAGACGGCAAGGA+AGG | 0.521640 | 5_4:-65057441 | Msa0864610:CDS |
| TCAATTATGACAAACTTAGC+AGG | 0.522019 | 5_4:+65057676 | None:intergenic |
| ACCATTGCAATTAATGGACT+CGG | 0.524368 | 5_4:-65057109 | Msa0864610:CDS |
| GTATTCAATTGTCAAGGAGC+TGG | 0.525702 | 5_4:-65055950 | Msa0864610:CDS |
| CTTGTTACTCCTGCTTCTGG+TGG | 0.525865 | 5_4:-65059336 | Msa0864610:CDS |
| CTGATGAATAAGCACCGAAA+AGG | 0.528725 | 5_4:+65055465 | None:intergenic |
| AAGCAAGAACTGTGTCTCAA+AGG | 0.529677 | 5_4:+65058809 | None:intergenic |
| GAAAATAAGCAATCCTTGGT+TGG | 0.534266 | 5_4:+65056137 | None:intergenic |
| TTAAAACATACCACAAAGAT+GGG | 0.534469 | 5_4:+65055790 | None:intergenic |
| TTGTCATCGCGAGAGAAAGA+AGG | 0.535948 | 5_4:-65058052 | Msa0864610:intron |
| ATGGAAACTTGATGGTGTTA+GGG | 0.536276 | 5_4:-65059392 | Msa0864610:CDS |
| TATTGGGGTGGTGTTAAACC+TGG | 0.537243 | 5_4:-65057223 | Msa0864610:CDS |
| CACTCATATCTAGCATCCGC+TGG | 0.540430 | 5_4:-65057043 | Msa0864610:CDS |
| CAAGGAAGGTCATCGGATAG+AGG | 0.543698 | 5_4:-65057427 | Msa0864610:CDS |
| TGTTCCATGCCACTAATCCC+AGG | 0.544946 | 5_4:+65057205 | None:intergenic |
| GTCCTGCTCCAAGAGTTTCA+AGG | 0.548641 | 5_4:+65056987 | None:intergenic |
| GAAACTCTTGGAGCAGGACA+TGG | 0.552642 | 5_4:-65056983 | Msa0864610:CDS |
| ATTGAAATTTGTGTCGAAAG+TGG | 0.554018 | 5_4:-65058645 | Msa0864610:intron |
| GTGGCAGATGATAAATGGAC+AGG | 0.554459 | 5_4:-65055830 | Msa0864610:CDS |
| TCGGTGCTTATTCATCAGCT+CGG | 0.554791 | 5_4:-65055460 | Msa0864610:CDS |
| TCGGATAGAGGACCCTGCCA+TGG | 0.557137 | 5_4:-65057415 | Msa0864610:CDS |
| TGGAGCAGGACATGGTGGGA+GGG | 0.557166 | 5_4:-65056975 | Msa0864610:CDS |
| TGGACCCCAATGGTGTTGAA+TGG | 0.557644 | 5_4:-65057630 | Msa0864610:CDS |
| CCTGTGAAAGAATTACCAAA+TGG | 0.557659 | 5_4:-65055605 | Msa0864610:CDS |
| GGTGTTTCTTCTGATCAAAA+GGG | 0.558333 | 5_4:-65059288 | Msa0864610:CDS |
| GACTCATTTGGTGTTCATTG+GGG | 0.558449 | 5_4:-65058440 | Msa0864610:CDS |
| GAAATATCATCAGGCATTGG+AGG | 0.559741 | 5_4:-65056939 | Msa0864610:CDS |
| GGAAAGATGACTGTAGGGGC+AGG | 0.561229 | 5_4:-65059429 | Msa0864610:exon |
| CGGATAGAGGACCCTGCCAT+GGG | 0.562030 | 5_4:-65057414 | Msa0864610:CDS |
| TTGGAGCAGGACATGGTGGG+AGG | 0.562696 | 5_4:-65056976 | Msa0864610:CDS |
| GTGGTGGATGACTCAGAGAA+TGG | 0.563083 | 5_4:-65058853 | Msa0864610:CDS |
| TGAATCACAGAACAGAGAAA+GGG | 0.563091 | 5_4:+65059484 | None:intergenic |
| ACTTCAGAGAATGTGAAAGA+AGG | 0.564462 | 5_4:-65057860 | Msa0864610:CDS |
| GCCGAGTCCATTAATTGCAA+TGG | 0.564685 | 5_4:+65057108 | None:intergenic |
| GCAGGAATATCTGTTGCTGA+TGG | 0.567325 | 5_4:-65059411 | Msa0864610:CDS |
| AAGAAGCTTGTACTTCCTGA+CGG | 0.570895 | 5_4:-65056191 | Msa0864610:CDS |
| CACAAGGGTTGTGATATTGA+CGG | 0.577264 | 5_4:-65058777 | Msa0864610:CDS |
| GTTGGGGTATTCAATTGTCA+AGG | 0.578349 | 5_4:-65055956 | Msa0864610:CDS |
| GGAACAAAGAGCATTGCTGA+AGG | 0.578391 | 5_4:-65059514 | Msa0864610:five_prime_UTR |
| TGACTCCAGGAGATGAGATA+GGG | 0.578809 | 5_4:+65057161 | None:intergenic |
| TTTATAGGCATGTGTATGTG+TGG | 0.579591 | 5_4:-65057261 | Msa0864610:intron |
| CATTCATGTTCCATATCTTG+AGG | 0.580578 | 5_4:+65055993 | None:intergenic |
| GGAACATTATGAGTCAAAGA+TGG | 0.580896 | 5_4:-65057188 | Msa0864610:CDS |
| TCAAGATGTTTAATTCAGGA+GGG | 0.581133 | 5_4:-65055556 | Msa0864610:CDS |
| ATTTCAGAGTCTTCATCCGA+TGG | 0.583061 | 5_4:-65056507 | Msa0864610:intron |
| CTTGCTTATTGAAACACACA+AGG | 0.583726 | 5_4:-65058793 | Msa0864610:CDS |
| ATATGTTGAACTGGTTTGGA+TGG | 0.583851 | 5_4:-65057913 | Msa0864610:CDS |
| CGGAGAAAGAGTTATATCAA+TGG | 0.585923 | 5_4:-65055352 | Msa0864610:CDS |
| CAAGATGTTTAATTCAGGAG+GGG | 0.587768 | 5_4:-65055555 | Msa0864610:CDS |
| TTGTCATAATTGATGATGGA+TGG | 0.588951 | 5_4:-65057666 | Msa0864610:CDS |
| GACTATAGATTTGAGTGTGC+CGG | 0.590182 | 5_4:-65055372 | Msa0864610:CDS |
| GCAGCATGATATTCAGCCAT+CGG | 0.591613 | 5_4:+65056491 | None:intergenic |
| TTATGAGGAAGAATCAGGAT+TGG | 0.596231 | 5_4:-65055396 | Msa0864610:CDS |
| TCTTCAAAAGATTGAAGTCG+TGG | 0.598479 | 5_4:+65056210 | None:intergenic |
| ATTTCAGGGCTGTTCTTCAG+GGG | 0.600176 | 5_4:-65058683 | Msa0864610:CDS |
| ATGTTTCAATGAAAGTGCGC+GGG | 0.600368 | 5_4:-65055493 | Msa0864610:CDS |
| GATTACTGTTGATTCAGAAG+AGG | 0.601348 | 5_4:-65055429 | Msa0864610:CDS |
| ATTGACGGAGGGATCGACAA+TGG | 0.602460 | 5_4:-65058762 | Msa0864610:CDS |
| GAACAAAGAGCATTGCTGAA+GGG | 0.603346 | 5_4:-65059513 | Msa0864610:five_prime_UTR |
| TCAATTGTCAAGGAGCTGGT+TGG | 0.603577 | 5_4:-65055946 | Msa0864610:CDS |
| AATCACAAATTCCAGAAAGA+CGG | 0.606328 | 5_4:-65057450 | Msa0864610:CDS |
| TCACACAATTCACATTGCAT+CGG | 0.606593 | 5_4:-65056683 | Msa0864610:CDS |
| TAAACCTGGGATTAGTGGCA+TGG | 0.606597 | 5_4:-65057209 | Msa0864610:CDS |
| TGACTATTCTGGAGTTGTTG+GGG | 0.608376 | 5_4:-65055972 | Msa0864610:CDS |
| CTGTGCCTGGATTCTCGTCG+TGG | 0.608941 | 5_4:+65055897 | None:intergenic |
| ATCCTGCTAGAGATGGAAAG+AGG | 0.609009 | 5_4:-65056112 | Msa0864610:intron |
| GGTAACAAAACCGCGTAGGT+AGG | 0.610466 | 5_4:+65058720 | None:intergenic |
| GAATCAACAGTAATCAACTT+CGG | 0.612554 | 5_4:+65055437 | None:intergenic |
| ATTGGGGTGGTGTTAAACCT+GGG | 0.617867 | 5_4:-65057222 | Msa0864610:CDS |
| TGCATGAGTCACAATACAGA+CGG | 0.618170 | 5_4:-65056875 | Msa0864610:CDS |
| CATTTGGTAATTCTTTCACA+GGG | 0.619704 | 5_4:+65055606 | None:intergenic |
| AATTCAAAAGGTTTCAACAG+TGG | 0.620498 | 5_4:+65059457 | None:intergenic |
| ACTCTTGGAGCAGGACATGG+TGG | 0.623127 | 5_4:-65056980 | Msa0864610:CDS |
| GCTGCTGCAAGAGCAGTTGG+AGG | 0.623143 | 5_4:-65056473 | Msa0864610:CDS |
| TGGTGGATGACTCAGAGAAT+GGG | 0.624213 | 5_4:-65058852 | Msa0864610:CDS |
| TCTGTTAGCATGGACCCCAA+TGG | 0.628808 | 5_4:-65057640 | Msa0864610:CDS |
| TGGATGGCAATCTGTTAGCA+TGG | 0.629189 | 5_4:-65057650 | Msa0864610:CDS |
| AAGACGGCAAGGAAGGTCAT+CGG | 0.630476 | 5_4:-65057434 | Msa0864610:CDS |
| TGTGATGAATTCCCATGGCA+GGG | 0.631193 | 5_4:+65057403 | None:intergenic |
| CTCTTGGAGCAGGACATGGT+GGG | 0.631869 | 5_4:-65056979 | Msa0864610:CDS |
| AAGGAAATATCATCAGGCAT+TGG | 0.632296 | 5_4:-65056942 | Msa0864610:CDS |
| GTGGGAGGGTGAAACTTGCA+AGG | 0.634046 | 5_4:-65056961 | Msa0864610:CDS |
| GTTTCCATTCAACACCATTG+GGG | 0.635207 | 5_4:+65057626 | None:intergenic |
| ATGTTGTGTAGCGACAAGCC+CGG | 0.639558 | 5_4:-65056236 | Msa0864610:intron |
| ACAAAGATGGGAAAATATGA+CGG | 0.641050 | 5_4:+65055802 | None:intergenic |
| TGAAGTAGTCTATCTTCCAA+AGG | 0.643888 | 5_4:-65055684 | Msa0864610:CDS |
| CAGCGGATGCTAGATATGAG+TGG | 0.644150 | 5_4:+65057044 | None:intergenic |
| CTGATGTGGAGGAATTTGAT+GGG | 0.644921 | 5_4:-65058462 | Msa0864610:CDS |
| ATGTGAAAGAAGGATTACAA+AGG | 0.646563 | 5_4:-65057850 | Msa0864610:intron |
| AAACTTTCTCAGGATTCACA+AGG | 0.647279 | 5_4:+65057086 | None:intergenic |
| AGGGTTGTGATATTGACGGA+GGG | 0.657385 | 5_4:-65058773 | Msa0864610:CDS |
| AAATGAGAAAGAAACAGAGA+AGG | 0.660930 | 5_4:+65059543 | None:intergenic |
| TCAAGGAAAGATGACTGTAG+GGG | 0.662013 | 5_4:-65059433 | Msa0864610:exon |
| ACTCAGAGAATGGGTAACTG+TGG | 0.666426 | 5_4:-65058843 | Msa0864610:CDS |
| GATTGTAGGATGTCCTGATG+TGG | 0.668084 | 5_4:-65058476 | Msa0864610:intron |
| CACGCAATAACAGGATATTG+GGG | 0.669516 | 5_4:-65057238 | Msa0864610:CDS |
| CAAATTCCAGAAAGACGGCA+AGG | 0.669689 | 5_4:-65057445 | Msa0864610:CDS |
| GCAAGAACTGTGTCTCAAAG+GGG | 0.673183 | 5_4:+65058811 | None:intergenic |
| AAGAGGTAACAAAACCGCGT+AGG | 0.674435 | 5_4:+65058716 | None:intergenic |
| ACTTCCAGGAAGACCAACCA+AGG | 0.682213 | 5_4:-65056150 | Msa0864610:CDS |
| CTGGTTTGGATGGTGTACAT+GGG | 0.686671 | 5_4:-65057903 | Msa0864610:CDS |
| TGTAGGATGTCCTGATGTGG+AGG | 0.686980 | 5_4:-65058473 | Msa0864610:intron |
| AAGGGTTGTGATATTGACGG+AGG | 0.687615 | 5_4:-65058774 | Msa0864610:CDS |
| AATGTTTCAATGAAAGTGCG+CGG | 0.689249 | 5_4:-65055494 | Msa0864610:CDS |
| TGTGAATTGTGTGAGATGCA+GGG | 0.690378 | 5_4:+65056692 | None:intergenic |
| TATCGACCATTTATCGACAG+TGG | 0.693571 | 5_4:-65055849 | Msa0864610:CDS |
| CTGGCTGCATAAATTCACCA+AGG | 0.700322 | 5_4:+65056641 | None:intergenic |
| GCAATAACAGGATATTGGGG+TGG | 0.700706 | 5_4:-65057235 | Msa0864610:CDS |
| CCAAGGTGGTCCTACCTACG+CGG | 0.703690 | 5_4:-65058730 | Msa0864610:CDS |
| TTGCTTATTGAAACACACAA+GGG | 0.706543 | 5_4:-65058792 | Msa0864610:CDS |
| GACAATGGAGAACAAGACCA+AGG | 0.709771 | 5_4:-65058747 | Msa0864610:CDS |
| GGTAATGTGATGAATTCCCA+TGG | 0.713393 | 5_4:+65057398 | None:intergenic |
| TTTGACACCATCAATACCAG+CGG | 0.721207 | 5_4:+65057027 | None:intergenic |
| AATGGAGAACAAGACCAAGG+TGG | 0.764997 | 5_4:-65058744 | Msa0864610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTTTTTTTTTT+TGG | - | chr5_4:65056989-65057008 | Msa0864610:CDS | 0.0% |
| !!! | TTTTATTATGTTTTTGTTTT+AGG | - | chr5_4:65055903-65055922 | Msa0864610:CDS | 10.0% |
| !!! | TTTATTATGTTTTTGTTTTA+GGG | - | chr5_4:65055904-65055923 | Msa0864610:CDS | 10.0% |
| !!! | TTTTTAAAGTAAAAATTTGA+TGG | - | chr5_4:65056806-65056825 | Msa0864610:intron | 10.0% |
| !!! | TTTATAAATCAAATACTTTT+AGG | - | chr5_4:65059499-65059518 | Msa0864610:five_prime_UTR | 10.0% |
| !!! | TTATTATGTTTTTGTTTTAG+GGG | - | chr5_4:65055905-65055924 | Msa0864610:CDS | 15.0% |
| !! | TTATGTAATTGTTAACAAAT+TGG | - | chr5_4:65056541-65056560 | Msa0864610:intron | 15.0% |
| !! | TATTAACAAAAAAAGATTTC+AGG | + | chr5_4:65058507-65058526 | None:intergenic | 15.0% |
| !! | ATAAACATCAAAAACCAAAA+GGG | + | chr5_4:65055836-65055855 | None:intergenic | 20.0% |
| !! | AATAAACATCAAAAACCAAA+AGG | + | chr5_4:65055837-65055856 | None:intergenic | 20.0% |
| !!! | TATTATGTTTTTGTTTTAGG+GGG | - | chr5_4:65055906-65055925 | Msa0864610:CDS | 20.0% |
| !!! | TTTTTTCAATTACTAGGATT+AGG | - | chr5_4:65056572-65056591 | Msa0864610:intron | 20.0% |
| !! | GTAAAACACAAAAATATTAG+AGG | + | chr5_4:65056857-65056876 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGGTACATACAA+AGG | - | chr5_4:65057001-65057020 | Msa0864610:CDS | 20.0% |
| !! | TTATTTATTTCCACTAAAAG+TGG | - | chr5_4:65057026-65057045 | Msa0864610:CDS | 20.0% |
| !! | TATATTTGACAATGAAAGTT+GGG | + | chr5_4:65057245-65057264 | None:intergenic | 20.0% |
| !! | ATATATTTGACAATGAAAGT+TGG | + | chr5_4:65057246-65057265 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTTTGATTTCAT+TGG | + | chr5_4:65057440-65057459 | None:intergenic | 20.0% |
| !!! | TTATTGAATAAATCTAGAGT+AGG | + | chr5_4:65058016-65058035 | None:intergenic | 20.0% |
| !! | TCTAGATTTATTCAATAACA+AGG | - | chr5_4:65058018-65058037 | Msa0864610:intron | 20.0% |
| !! | TCATGTAAGTTGTTAAATAT+AGG | - | chr5_4:65058209-65058228 | Msa0864610:intron | 20.0% |
| !! | CTATGAACCAAAATATATTT+AGG | + | chr5_4:65058239-65058258 | None:intergenic | 20.0% |
| !! | AGTTAAAAGAGAATAACTTA+TGG | + | chr5_4:65058399-65058418 | None:intergenic | 20.0% |
| !! | TTAATCAAGATGTTTAATTC+AGG | - | chr5_4:65059254-65059273 | Msa0864610:intron | 20.0% |
| !! | ATTTACAACTCCATTAAATT+CGG | + | chr5_4:65059303-65059322 | None:intergenic | 20.0% |
| !!! | TAAATCAAATACTTTTAGGT+TGG | - | chr5_4:65059503-65059522 | Msa0864610:five_prime_UTR | 20.0% |
| !! | TGAAACCTTTTGAATTTTCA+AGG | - | chr5_4:65055364-65055383 | Msa0864610:CDS | 25.0% |
| ! | TCTTTCCTTGAAAATTCAAA+AGG | + | chr5_4:65055372-65055391 | None:intergenic | 25.0% |
| ! | TCACACAAAAAACATACAAA+AGG | + | chr5_4:65055703-65055722 | None:intergenic | 25.0% |
| ! | CTATCATCATGATAAAAACA+TGG | - | chr5_4:65055744-65055763 | Msa0864610:intron | 25.0% |
| ! | TAAACATCAAAAACCAAAAG+GGG | + | chr5_4:65055835-65055854 | None:intergenic | 25.0% |
| ! | TTTGCAAGTGTTAATATTGA+AGG | - | chr5_4:65055860-65055879 | Msa0864610:CDS | 25.0% |
| !!! | CGTTTTTTGTGTTTGTAAAT+CGG | - | chr5_4:65056217-65056236 | Msa0864610:CDS | 25.0% |
| !!! | GTTTTTTGTGTTTGTAAATC+GGG | - | chr5_4:65056218-65056237 | Msa0864610:CDS | 25.0% |
| !!! | TTAGTTTTTACAGTTATGTG+TGG | + | chr5_4:65056250-65056269 | None:intergenic | 25.0% |
| !!! | TCTGAGTTTTTTCAATTACT+AGG | - | chr5_4:65056566-65056585 | Msa0864610:intron | 25.0% |
| !!! | TTTGAACTTTTTCTTTGTTC+AGG | - | chr5_4:65056713-65056732 | Msa0864610:CDS | 25.0% |
| !! | TTACGTTATTTACAGTTTTG+AGG | - | chr5_4:65057104-65057123 | Msa0864610:CDS | 25.0% |
| ! | AAGTTTGTCATAATTGATGA+TGG | - | chr5_4:65057144-65057163 | Msa0864610:CDS | 25.0% |
| !!! | TTTTCGTCGTTTTTGTTTAT+AGG | - | chr5_4:65057538-65057557 | Msa0864610:intron | 25.0% |
| ! | TTAGATACCATTGCAATTAA+TGG | - | chr5_4:65057699-65057718 | Msa0864610:intron | 25.0% |
| ! | TAAAAGTGAAAAACTTTCTC+AGG | + | chr5_4:65057741-65057760 | None:intergenic | 25.0% |
| !! | AGGAGATCCTAAATATATTT+TGG | - | chr5_4:65058229-65058248 | Msa0864610:intron | 25.0% |
| ! | AATCATTACCTGACATAAAT+AGG | + | chr5_4:65058371-65058390 | None:intergenic | 25.0% |
| !!! | TATGTAATTGTTTGTTGTCT+TGG | - | chr5_4:65058429-65058448 | Msa0864610:CDS | 25.0% |
| ! | TTAAAACATACCACAAAGAT+GGG | + | chr5_4:65059027-65059046 | None:intergenic | 25.0% |
| ! | TCGTAAAAACTTCATATTCT+CGG | + | chr5_4:65059184-65059203 | None:intergenic | 25.0% |
| ! | AACATCTTGATTAAACCAAT+AGG | + | chr5_4:65059248-65059267 | None:intergenic | 25.0% |
| !!! | AAATACTTTTAGGTTGGTTA+TGG | - | chr5_4:65059509-65059528 | Msa0864610:five_prime_UTR | 25.0% |
| GTTTCTTTCTCATTTGCATT+TGG | - | chr5_4:65055279-65055298 | Msa0864610:three_prime_UTR | 30.0% | |
| AATTCAAAAGGTTTCAACAG+TGG | + | chr5_4:65055360-65055379 | None:intergenic | 30.0% | |
| CTGTGTTTGTTTAAGGATTA+AGG | - | chr5_4:65055806-65055825 | Msa0864610:CDS | 30.0% | |
| TTGCTTATTGAAACACACAA+GGG | - | chr5_4:65056022-65056041 | Msa0864610:intron | 30.0% | |
| ATTGAAATTTGTGTCGAAAG+TGG | - | chr5_4:65056169-65056188 | Msa0864610:CDS | 30.0% | |
| ! | TATGCATTGTGAATTTTTGC+TGG | - | chr5_4:65056309-65056328 | Msa0864610:intron | 30.0% |
| ! | ATGCATTGTGAATTTTTGCT+GGG | - | chr5_4:65056310-65056329 | Msa0864610:intron | 30.0% |
| !! | GCATTTGTTATGACTTCATA+AGG | + | chr5_4:65056411-65056430 | None:intergenic | 30.0% |
| AAACAAGAACAAAGAAGAAC+TGG | + | chr5_4:65056476-65056495 | None:intergenic | 30.0% | |
| TGTTCCATTAGTTCAGTATT+AGG | - | chr5_4:65056635-65056654 | Msa0864610:CDS | 30.0% | |
| AAGTCCTAATACTGAACTAA+TGG | + | chr5_4:65056642-65056661 | None:intergenic | 30.0% | |
| AAAGTTCATCACTGCAAATT+AGG | + | chr5_4:65056693-65056712 | None:intergenic | 30.0% | |
| GGCATCTGAATAATACAAAT+AGG | + | chr5_4:65056879-65056898 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGGATTACAA+AGG | - | chr5_4:65056964-65056983 | Msa0864610:CDS | 30.0% | |
| !!! | GTTATTTACAGTTTTGAGGA+AGG | - | chr5_4:65057108-65057127 | Msa0864610:CDS | 30.0% |
| TCAATTATGACAAACTTAGC+AGG | + | chr5_4:65057141-65057160 | None:intergenic | 30.0% | |
| !! | TTGTCATAATTGATGATGGA+TGG | - | chr5_4:65057148-65057167 | Msa0864610:CDS | 30.0% |
| TTCGTCATTGTAAAAATGCA+TGG | + | chr5_4:65057276-65057295 | None:intergenic | 30.0% | |
| AATCACAAATTCCAGAAAGA+CGG | - | chr5_4:65057364-65057383 | Msa0864610:intron | 30.0% | |
| AAACGACGAAAAATTTGCAA+CGG | + | chr5_4:65057530-65057549 | None:intergenic | 30.0% | |
| ! | GCTTACAATACTATTTTCCT+TGG | - | chr5_4:65058156-65058175 | Msa0864610:intron | 30.0% |
| CACAACATTACAAAATCAGA+AGG | + | chr5_4:65058566-65058585 | None:intergenic | 30.0% | |
| ATATTAAGAGCTAAACTTCC+AGG | - | chr5_4:65058650-65058669 | Msa0864610:CDS | 30.0% | |
| ATCAGAAAATAAGCAATCCT+TGG | + | chr5_4:65058684-65058703 | None:intergenic | 30.0% | |
| CTTGTCAAGTAAGTAAAGTT+AGG | + | chr5_4:65058753-65058772 | None:intergenic | 30.0% | |
| ! | TTTGCTCATGGATTTTGTTA+TGG | - | chr5_4:65058792-65058811 | Msa0864610:CDS | 30.0% |
| ACAAAGATGGGAAAATATGA+CGG | + | chr5_4:65059015-65059034 | None:intergenic | 30.0% | |
| CTTAAAACATACCACAAAGA+TGG | + | chr5_4:65059028-65059047 | None:intergenic | 30.0% | |
| ! | CATCTTTGTGGTATGTTTTA+AGG | - | chr5_4:65059026-65059045 | Msa0864610:intron | 30.0% |
| TTTACATCACACTCCTAAAA+AGG | - | chr5_4:65059050-65059069 | Msa0864610:intron | 30.0% | |
| CAATTATACACAAGAAAAGC+TGG | + | chr5_4:65059081-65059100 | None:intergenic | 30.0% | |
| TGTTTATGATGTTTGTTTGC+AGG | - | chr5_4:65059107-65059126 | Msa0864610:intron | 30.0% | |
| ATTGGAATAGAAACATCCTT+TGG | + | chr5_4:65059149-65059168 | None:intergenic | 30.0% | |
| CGTAAAAACTTCATATTCTC+GGG | + | chr5_4:65059183-65059202 | None:intergenic | 30.0% | |
| ! | CATTTGGTAATTCTTTCACA+GGG | + | chr5_4:65059211-65059230 | None:intergenic | 30.0% |
| TAAACCAATAGGAGCAAATT+TGG | + | chr5_4:65059237-65059256 | None:intergenic | 30.0% | |
| ATCAAGATGTTTAATTCAGG+AGG | - | chr5_4:65059257-65059276 | Msa0864610:CDS | 30.0% | |
| TCAAGATGTTTAATTCAGGA+GGG | - | chr5_4:65059258-65059277 | Msa0864610:CDS | 30.0% | |
| ! | GAGTTTAGTTCCGAATTTAA+TGG | - | chr5_4:65059290-65059309 | Msa0864610:CDS | 30.0% |
| GAATCAACAGTAATCAACTT+CGG | + | chr5_4:65059380-65059399 | None:intergenic | 30.0% | |
| CATTGATATAACTCTTTCTC+CGG | + | chr5_4:65059464-65059483 | None:intergenic | 30.0% | |
| TGAATCACAGAACAGAGAAA+GGG | + | chr5_4:65055333-65055352 | None:intergenic | 35.0% | |
| ATGAATCACAGAACAGAGAA+AGG | + | chr5_4:65055334-65055353 | None:intergenic | 35.0% | |
| TTTCAAGGAAAGATGACTGT+AGG | - | chr5_4:65055379-65055398 | Msa0864610:CDS | 35.0% | |
| TTCAAGGAAAGATGACTGTA+GGG | - | chr5_4:65055380-65055399 | Msa0864610:CDS | 35.0% | |
| !! | ATGGAAACTTGATGGTGTTA+GGG | - | chr5_4:65055422-65055441 | Msa0864610:CDS | 35.0% |
| TTGATCAATGGTGCATTTCT+TGG | - | chr5_4:65055505-65055524 | Msa0864610:CDS | 35.0% | |
| TGGTGTTTCTTCTGATCAAA+AGG | - | chr5_4:65055525-65055544 | Msa0864610:CDS | 35.0% | |
| GGTGTTTCTTCTGATCAAAA+GGG | - | chr5_4:65055526-65055545 | Msa0864610:CDS | 35.0% | |
| GTTGACACTGTGTTTGTTTA+AGG | - | chr5_4:65055799-65055818 | Msa0864610:intron | 35.0% | |
| CTTGCTTATTGAAACACACA+AGG | - | chr5_4:65056021-65056040 | Msa0864610:intron | 35.0% | |
| !! | GTTTTGTTACCTCTTTTGGA+AGG | - | chr5_4:65056106-65056125 | Msa0864610:intron | 35.0% |
| !! | TCTTTTGGAAGGAGATTTCA+GGG | - | chr5_4:65056117-65056136 | Msa0864610:CDS | 35.0% |
| ! | GTTTTTACAGTTATGTGTGG+AGG | + | chr5_4:65056247-65056266 | None:intergenic | 35.0% |
| AGAAGAACTGGAAAGTGAAA+AGG | + | chr5_4:65056464-65056483 | None:intergenic | 35.0% | |
| TGCGAAATTTACATCACTGA+TGG | - | chr5_4:65056504-65056523 | Msa0864610:intron | 35.0% | |
| ATGAACTTTAAGCTGCAACA+AGG | + | chr5_4:65056832-65056851 | None:intergenic | 35.0% | |
| !! | ATATGTTGAACTGGTTTGGA+TGG | - | chr5_4:65056901-65056920 | Msa0864610:CDS | 35.0% |
| ACTTCAGAGAATGTGAAAGA+AGG | - | chr5_4:65056954-65056973 | Msa0864610:CDS | 35.0% | |
| !! | GTAACTTAGACCACTTTTAG+TGG | + | chr5_4:65057039-65057058 | None:intergenic | 35.0% |
| !!! | ATTTACAGTTTTGAGGAAGG+TGG | - | chr5_4:65057111-65057130 | Msa0864610:CDS | 35.0% |
| TGTTTCCATTCAACACCATT+GGG | + | chr5_4:65057192-65057211 | None:intergenic | 35.0% | |
| ATGTTTCCATTCAACACCAT+TGG | + | chr5_4:65057193-65057212 | None:intergenic | 35.0% | |
| TTTATAGGCATGTGTATGTG+TGG | - | chr5_4:65057553-65057572 | Msa0864610:intron | 35.0% | |
| GGAACATTATGAGTCAAAGA+TGG | - | chr5_4:65057626-65057645 | Msa0864610:CDS | 35.0% | |
| TATCTAATGCTTCATCTGGT+TGG | + | chr5_4:65057686-65057705 | None:intergenic | 35.0% | |
| ATGGTATCTAATGCTTCATC+TGG | + | chr5_4:65057690-65057709 | None:intergenic | 35.0% | |
| !! | ACCATTGCAATTAATGGACT+CGG | - | chr5_4:65057705-65057724 | Msa0864610:intron | 35.0% |
| AAACTTTCTCAGGATTCACA+AGG | + | chr5_4:65057731-65057750 | None:intergenic | 35.0% | |
| CAGAATATCCTTGAAACTCT+TGG | - | chr5_4:65057819-65057838 | Msa0864610:intron | 35.0% | |
| ACTTGCAAGGAAATATCATC+AGG | - | chr5_4:65057866-65057885 | Msa0864610:CDS | 35.0% | |
| AAGGAAATATCATCAGGCAT+TGG | - | chr5_4:65057872-65057891 | Msa0864610:CDS | 35.0% | |
| ACTAGGAACTTTCCTGATAA+CGG | - | chr5_4:65057906-65057925 | Msa0864610:CDS | 35.0% | |
| CAACAAATGATTCCGTTATC+AGG | + | chr5_4:65057921-65057940 | None:intergenic | 35.0% | |
| !! | ACAATACAGACGGATTGTAT+AGG | - | chr5_4:65057949-65057968 | Msa0864610:intron | 35.0% |
| TTAGAGCTTCAGATGATTTC+TGG | - | chr5_4:65058091-65058110 | Msa0864610:intron | 35.0% | |
| TCACACAATTCACATTGCAT+CGG | - | chr5_4:65058131-65058150 | Msa0864610:intron | 35.0% | |
| TGAATTTATGCAGCCAGATT+GGG | - | chr5_4:65058179-65058198 | Msa0864610:intron | 35.0% | |
| ACATGAAACATATCCCAATC+TGG | + | chr5_4:65058195-65058214 | None:intergenic | 35.0% | |
| TGGTTCATAGAAAATGTGCT+AGG | - | chr5_4:65058249-65058268 | Msa0864610:intron | 35.0% | |
| AGAAAATGTGCTAGGATTTC+AGG | - | chr5_4:65058257-65058276 | Msa0864610:intron | 35.0% | |
| TCTTCAAAAGATTGAAGTCG+TGG | + | chr5_4:65058607-65058626 | None:intergenic | 35.0% | |
| GAAAATAAGCAATCCTTGGT+TGG | + | chr5_4:65058680-65058699 | None:intergenic | 35.0% | |
| CATTCATGTTCCATATCTTG+AGG | + | chr5_4:65058824-65058843 | None:intergenic | 35.0% | |
| TGGAACATGAATGACTATTC+TGG | - | chr5_4:65058831-65058850 | Msa0864610:CDS | 35.0% | |
| !! | AATGACTATTCTGGAGTTGT+TGG | - | chr5_4:65058840-65058859 | Msa0864610:CDS | 35.0% |
| !! | ATGACTATTCTGGAGTTGTT+GGG | - | chr5_4:65058841-65058860 | Msa0864610:CDS | 35.0% |
| ! | GTCATATTTTCCCATCTTTG+TGG | - | chr5_4:65059014-65059033 | Msa0864610:intron | 35.0% |
| ! | AAAGCTGGTGTAACCTTTTT+AGG | + | chr5_4:65059066-65059085 | None:intergenic | 35.0% |
| TGAAGTAGTCTATCTTCCAA+AGG | - | chr5_4:65059130-65059149 | Msa0864610:intron | 35.0% | |
| TTCATATTCTCGGGATTTCA+TGG | + | chr5_4:65059174-65059193 | None:intergenic | 35.0% | |
| ! | CCATTTGGTAATTCTTTCAC+AGG | + | chr5_4:65059212-65059231 | None:intergenic | 35.0% |
| CCTGTGAAAGAATTACCAAA+TGG | - | chr5_4:65059209-65059228 | Msa0864610:intron | 35.0% | |
| CAAGATGTTTAATTCAGGAG+GGG | - | chr5_4:65059259-65059278 | Msa0864610:CDS | 35.0% | |
| ! | AATGTTTCAATGAAAGTGCG+CGG | - | chr5_4:65059320-65059339 | Msa0864610:CDS | 35.0% |
| !! | GATTACTGTTGATTCAGAAG+AGG | - | chr5_4:65059385-65059404 | Msa0864610:CDS | 35.0% |
| TTCAGTTATGAGGAAGAATC+AGG | - | chr5_4:65059413-65059432 | Msa0864610:CDS | 35.0% | |
| TTATGAGGAAGAATCAGGAT+TGG | - | chr5_4:65059418-65059437 | Msa0864610:CDS | 35.0% | |
| CGGAGAAAGAGTTATATCAA+TGG | - | chr5_4:65059462-65059481 | Msa0864610:five_prime_UTR | 35.0% | |
| !! | GAACAAAGAGCATTGCTGAA+GGG | - | chr5_4:65055301-65055320 | Msa0864610:three_prime_UTR | 40.0% |
| TCAAGGAAAGATGACTGTAG+GGG | - | chr5_4:65055381-65055400 | Msa0864610:CDS | 40.0% | |
| TGTTGCTGATGGAAACTTGA+TGG | - | chr5_4:65055414-65055433 | Msa0864610:CDS | 40.0% | |
| !! | GATGGAAACTTGATGGTGTT+AGG | - | chr5_4:65055421-65055440 | Msa0864610:CDS | 40.0% |
| TCTGGTGGTTCTTTGATCAA+TGG | - | chr5_4:65055493-65055512 | Msa0864610:CDS | 40.0% | |
| ACATACTCAAGCTTGCCAAT+AGG | + | chr5_4:65055568-65055587 | None:intergenic | 40.0% | |
| ! | GTCTTTTCCGCTTCAAAATG+TGG | - | chr5_4:65055942-65055961 | Msa0864610:CDS | 40.0% |
| ! | TTTTCCGCTTCAAAATGTGG+TGG | - | chr5_4:65055945-65055964 | Msa0864610:CDS | 40.0% |
| !! | TCATCCACCACATTTTGAAG+CGG | + | chr5_4:65055952-65055971 | None:intergenic | 40.0% |
| AGCAAGAACTGTGTCTCAAA+GGG | + | chr5_4:65056007-65056026 | None:intergenic | 40.0% | |
| AAGCAAGAACTGTGTCTCAA+AGG | + | chr5_4:65056008-65056027 | None:intergenic | 40.0% | |
| CACAAGGGTTGTGATATTGA+CGG | - | chr5_4:65056037-65056056 | Msa0864610:intron | 40.0% | |
| CTGAAATCTCCTTCCAAAAG+AGG | + | chr5_4:65056118-65056137 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGAAGGAGATTTC+AGG | - | chr5_4:65056116-65056135 | Msa0864610:CDS | 40.0% |
| CTGATGTGGAGGAATTTGAT+GGG | - | chr5_4:65056352-65056371 | Msa0864610:intron | 40.0% | |
| GGAATTTGATGGGACTCATT+TGG | - | chr5_4:65056362-65056381 | Msa0864610:intron | 40.0% | |
| !! | GGACTCATTTGGTGTTCATT+GGG | - | chr5_4:65056373-65056392 | Msa0864610:intron | 40.0% |
| !! | GACTCATTTGGTGTTCATTG+GGG | - | chr5_4:65056374-65056393 | Msa0864610:intron | 40.0% |
| AGATGCCAGATATGTTGAAC+TGG | - | chr5_4:65056892-65056911 | Msa0864610:CDS | 40.0% | |
| CCAAACCAGTTCAACATATC+TGG | + | chr5_4:65056900-65056919 | None:intergenic | 40.0% | |
| CCAGATATGTTGAACTGGTT+TGG | - | chr5_4:65056897-65056916 | Msa0864610:CDS | 40.0% | |
| !! | CACATTCTCTGAAGTGACAT+TGG | + | chr5_4:65056949-65056968 | None:intergenic | 40.0% |
| GTTTCCATTCAACACCATTG+GGG | + | chr5_4:65057191-65057210 | None:intergenic | 40.0% | |
| GGTAATGTGATGAATTCCCA+TGG | + | chr5_4:65057419-65057438 | None:intergenic | 40.0% | |
| GCACGCAATAACAGGATATT+GGG | - | chr5_4:65057575-65057594 | Msa0864610:intron | 40.0% | |
| CACGCAATAACAGGATATTG+GGG | - | chr5_4:65057576-65057595 | Msa0864610:intron | 40.0% | |
| TAATGCTTCATCTGGTTGGT+TGG | + | chr5_4:65057682-65057701 | None:intergenic | 40.0% | |
| TTTGACACCATCAATACCAG+CGG | + | chr5_4:65057790-65057809 | None:intergenic | 40.0% | |
| !! | GAAATATCATCAGGCATTGG+AGG | - | chr5_4:65057875-65057894 | Msa0864610:CDS | 40.0% |
| TGCATGAGTCACAATACAGA+CGG | - | chr5_4:65057939-65057958 | Msa0864610:intron | 40.0% | |
| !! | TACAGACGGATTGTATAGGT+AGG | - | chr5_4:65057953-65057972 | Msa0864610:intron | 40.0% |
| ! | TTGATGCAGTTCAAAGCGTT+CGG | - | chr5_4:65058062-65058081 | Msa0864610:CDS | 40.0% |
| TGTGAATTGTGTGAGATGCA+GGG | + | chr5_4:65058125-65058144 | None:intergenic | 40.0% | |
| ATGTGAATTGTGTGAGATGC+AGG | + | chr5_4:65058126-65058145 | None:intergenic | 40.0% | |
| GTGAATTTATGCAGCCAGAT+TGG | - | chr5_4:65058178-65058197 | Msa0864610:intron | 40.0% | |
| ATTTCAGAGTCTTCATCCGA+TGG | - | chr5_4:65058307-65058326 | Msa0864610:intron | 40.0% | |
| GAGGATGTCCTATTTATGTC+AGG | - | chr5_4:65058360-65058379 | Msa0864610:intron | 40.0% | |
| AAGAAGCTTGTACTTCCTGA+CGG | - | chr5_4:65058623-65058642 | Msa0864610:intron | 40.0% | |
| GCTCTTAATATAGAACCGTC+AGG | + | chr5_4:65058641-65058660 | None:intergenic | 40.0% | |
| ! | TTTTCTGATCCTGCTAGAGA+TGG | - | chr5_4:65058695-65058714 | Msa0864610:CDS | 40.0% |
| ! | ATCAGCTTGTTCTTTGCTCA+TGG | - | chr5_4:65058780-65058799 | Msa0864610:CDS | 40.0% |
| !! | TGACTATTCTGGAGTTGTTG+GGG | - | chr5_4:65058842-65058861 | Msa0864610:CDS | 40.0% |
| ! | GTTGGGGTATTCAATTGTCA+AGG | - | chr5_4:65058858-65058877 | Msa0864610:CDS | 40.0% |
| GTATTCAATTGTCAAGGAGC+TGG | - | chr5_4:65058864-65058883 | Msa0864610:CDS | 40.0% | |
| CACAGTCACTGACATCATTA+GGG | - | chr5_4:65058935-65058954 | Msa0864610:intron | 40.0% | |
| TATCGACCATTTATCGACAG+TGG | - | chr5_4:65058965-65058984 | Msa0864610:intron | 40.0% | |
| TCTCGGGATTTCATGGTAAT+TGG | + | chr5_4:65059167-65059186 | None:intergenic | 40.0% | |
| ! | ATGTTTCAATGAAAGTGCGC+GGG | - | chr5_4:65059321-65059340 | Msa0864610:CDS | 40.0% |
| !! | CTGATGAATAAGCACCGAAA+AGG | + | chr5_4:65059352-65059371 | None:intergenic | 40.0% |
| !! | TACTGTTGATTCAGAAGAGG+TGG | - | chr5_4:65059388-65059407 | Msa0864610:CDS | 40.0% |
| AGAGGTGGAATTCAGTTATG+AGG | - | chr5_4:65059403-65059422 | Msa0864610:CDS | 40.0% | |
| GACTATAGATTTGAGTGTGC+CGG | - | chr5_4:65059442-65059461 | Msa0864610:exon | 40.0% | |
| !! | GGAACAAAGAGCATTGCTGA+AGG | - | chr5_4:65055300-65055319 | Msa0864610:three_prime_UTR | 45.0% |
| GCAGGAATATCTGTTGCTGA+TGG | - | chr5_4:65055403-65055422 | Msa0864610:CDS | 45.0% | |
| !! | CTTGATGGTGTTAGGGAAGA+AGG | - | chr5_4:65055429-65055448 | Msa0864610:CDS | 45.0% |
| GTTCTTGTTACTCCTGCTTC+TGG | - | chr5_4:65055475-65055494 | Msa0864610:CDS | 45.0% | |
| ATCAAAGAACCACCAGAAGC+AGG | + | chr5_4:65055490-65055509 | None:intergenic | 45.0% | |
| AGTCGCAGAGTCTTTCCTAT+TGG | - | chr5_4:65055550-65055569 | Msa0864610:CDS | 45.0% | |
| ! | AGGATTAAGGTGACCCCTTT+TGG | - | chr5_4:65055819-65055838 | Msa0864610:CDS | 45.0% |
| ! | TGGTGGATGACTCAGAGAAT+GGG | - | chr5_4:65055962-65055981 | Msa0864610:CDS | 45.0% |
| ACTCAGAGAATGGGTAACTG+TGG | - | chr5_4:65055971-65055990 | Msa0864610:CDS | 45.0% | |
| GCAAGAACTGTGTCTCAAAG+GGG | + | chr5_4:65056006-65056025 | None:intergenic | 45.0% | |
| AAGGGTTGTGATATTGACGG+AGG | - | chr5_4:65056040-65056059 | Msa0864610:intron | 45.0% | |
| AGGGTTGTGATATTGACGGA+GGG | - | chr5_4:65056041-65056060 | Msa0864610:intron | 45.0% | |
| GACAATGGAGAACAAGACCA+AGG | - | chr5_4:65056067-65056086 | Msa0864610:intron | 45.0% | |
| AATGGAGAACAAGACCAAGG+TGG | - | chr5_4:65056070-65056089 | Msa0864610:intron | 45.0% | |
| AAGAGGTAACAAAACCGCGT+AGG | + | chr5_4:65056101-65056120 | None:intergenic | 45.0% | |
| !!! | CGCGGTTTTGTTACCTCTTT+TGG | - | chr5_4:65056102-65056121 | Msa0864610:intron | 45.0% |
| AGATTTCAGGGCTGTTCTTC+AGG | - | chr5_4:65056129-65056148 | Msa0864610:CDS | 45.0% | |
| GATTTCAGGGCTGTTCTTCA+GGG | - | chr5_4:65056130-65056149 | Msa0864610:CDS | 45.0% | |
| ATTTCAGGGCTGTTCTTCAG+GGG | - | chr5_4:65056131-65056150 | Msa0864610:CDS | 45.0% | |
| ! | ACTAAACCATCGAGTTGCCT+AGG | - | chr5_4:65056265-65056284 | Msa0864610:intron | 45.0% |
| TTTGCTGGGTGCATGATTGT+AGG | - | chr5_4:65056324-65056343 | Msa0864610:intron | 45.0% | |
| GATTGTAGGATGTCCTGATG+TGG | - | chr5_4:65056338-65056357 | Msa0864610:intron | 45.0% | |
| CCATCAAATTCCTCCACATC+AGG | + | chr5_4:65056354-65056373 | None:intergenic | 45.0% | |
| CCTGATGTGGAGGAATTTGA+TGG | - | chr5_4:65056351-65056370 | Msa0864610:intron | 45.0% | |
| !! | GGGACTCATTTGGTGTTCAT+TGG | - | chr5_4:65056372-65056391 | Msa0864610:intron | 45.0% |
| TTGTCATCGCGAGAGAAAGA+AGG | - | chr5_4:65056762-65056781 | Msa0864610:intron | 45.0% | |
| !! | ACTGGTTTGGATGGTGTACA+TGG | - | chr5_4:65056910-65056929 | Msa0864610:CDS | 45.0% |
| !! | CTGGTTTGGATGGTGTACAT+GGG | - | chr5_4:65056911-65056930 | Msa0864610:CDS | 45.0% |
| TGGATGGCAATCTGTTAGCA+TGG | - | chr5_4:65057164-65057183 | Msa0864610:CDS | 45.0% | |
| CAAATTCCAGAAAGACGGCA+AGG | - | chr5_4:65057369-65057388 | Msa0864610:CDS | 45.0% | |
| TGTGATGAATTCCCATGGCA+GGG | + | chr5_4:65057414-65057433 | None:intergenic | 45.0% | |
| ATGTGATGAATTCCCATGGC+AGG | + | chr5_4:65057415-65057434 | None:intergenic | 45.0% | |
| TATGTGTGGCACGCAATAAC+AGG | - | chr5_4:65057567-65057586 | Msa0864610:intron | 45.0% | |
| GGCACGCAATAACAGGATAT+TGG | - | chr5_4:65057574-65057593 | Msa0864610:intron | 45.0% | |
| GCAATAACAGGATATTGGGG+TGG | - | chr5_4:65057579-65057598 | Msa0864610:intron | 45.0% | |
| ! | TATTGGGGTGGTGTTAAACC+TGG | - | chr5_4:65057591-65057610 | Msa0864610:intron | 45.0% |
| ! | ATTGGGGTGGTGTTAAACCT+GGG | - | chr5_4:65057592-65057611 | Msa0864610:intron | 45.0% |
| GGTGTTAAACCTGGGATTAG+TGG | - | chr5_4:65057600-65057619 | Msa0864610:intron | 45.0% | |
| ! | TAAACCTGGGATTAGTGGCA+TGG | - | chr5_4:65057605-65057624 | Msa0864610:intron | 45.0% |
| TGACTCCAGGAGATGAGATA+GGG | + | chr5_4:65057656-65057675 | None:intergenic | 45.0% | |
| TTGACTCCAGGAGATGAGAT+AGG | + | chr5_4:65057657-65057676 | None:intergenic | 45.0% | |
| GCCGAGTCCATTAATTGCAA+TGG | + | chr5_4:65057709-65057728 | None:intergenic | 45.0% | |
| ATCCTTGAAACTCTTGGAGC+AGG | - | chr5_4:65057825-65057844 | Msa0864610:intron | 45.0% | |
| CTGGCTGCATAAATTCACCA+AGG | + | chr5_4:65058176-65058195 | None:intergenic | 45.0% | |
| GCAGCATGATATTCAGCCAT+CGG | + | chr5_4:65058326-65058345 | None:intergenic | 45.0% | |
| AAGATTGAAGTCGTGGTGTC+CGG | + | chr5_4:65058600-65058619 | None:intergenic | 45.0% | |
| ATCCTGCTAGAGATGGAAAG+AGG | - | chr5_4:65058702-65058721 | Msa0864610:CDS | 45.0% | |
| TACCTCTTTCCATCTCTAGC+AGG | + | chr5_4:65058707-65058726 | None:intergenic | 45.0% | |
| ATGGCAGTCTCCTCAAGATA+TGG | - | chr5_4:65058811-65058830 | Msa0864610:CDS | 45.0% | |
| TCAATTGTCAAGGAGCTGGT+TGG | - | chr5_4:65058868-65058887 | Msa0864610:CDS | 45.0% | |
| GCACAGTCACTGACATCATT+AGG | - | chr5_4:65058934-65058953 | Msa0864610:intron | 45.0% | |
| CATCTGCCACTGTCGATAAA+TGG | + | chr5_4:65058974-65058993 | None:intergenic | 45.0% | |
| CGACAGTGGCAGATGATAAA+TGG | - | chr5_4:65058979-65058998 | Msa0864610:intron | 45.0% | |
| GTGGCAGATGATAAATGGAC+AGG | - | chr5_4:65058984-65059003 | Msa0864610:intron | 45.0% | |
| GGAGCAAATTTGGCACCATT+TGG | + | chr5_4:65059227-65059246 | None:intergenic | 45.0% | |
| ! | GGTGCCAAATTTGCTCCTAT+TGG | - | chr5_4:65059230-65059249 | Msa0864610:intron | 45.0% |
| ! | TCGGTGCTTATTCATCAGCT+CGG | - | chr5_4:65059354-65059373 | Msa0864610:CDS | 45.0% |
| !! | AGGGAAGAAGGTTCTGAGTC+AGG | - | chr5_4:65055441-65055460 | Msa0864610:CDS | 50.0% |
| CTTGTTACTCCTGCTTCTGG+TGG | - | chr5_4:65055478-65055497 | Msa0864610:CDS | 50.0% | |
| !! | GTGGTGGATGACTCAGAGAA+TGG | - | chr5_4:65055961-65055980 | Msa0864610:CDS | 50.0% |
| ATTGACGGAGGGATCGACAA+TGG | - | chr5_4:65056052-65056071 | Msa0864610:intron | 50.0% | |
| GGTAACAAAACCGCGTAGGT+AGG | + | chr5_4:65056097-65056116 | None:intergenic | 50.0% | |
| TGTGATCCTAGGCAACTCGA+TGG | + | chr5_4:65056274-65056293 | None:intergenic | 50.0% | |
| AGTCTCAGCACTGTGATCCT+AGG | + | chr5_4:65056285-65056304 | None:intergenic | 50.0% | |
| TGTAGGATGTCCTGATGTGG+AGG | - | chr5_4:65056341-65056360 | Msa0864610:intron | 50.0% | |
| !! | CATTTGGTGTTCATTGGGGC+TGG | - | chr5_4:65056378-65056397 | Msa0864610:intron | 50.0% |
| TCTGTTAGCATGGACCCCAA+TGG | - | chr5_4:65057174-65057193 | Msa0864610:CDS | 50.0% | |
| ! | TGGACCCCAATGGTGTTGAA+TGG | - | chr5_4:65057184-65057203 | Msa0864610:CDS | 50.0% |
| TTCCAGAAAGACGGCAAGGA+AGG | - | chr5_4:65057373-65057392 | Msa0864610:CDS | 50.0% | |
| AAGACGGCAAGGAAGGTCAT+CGG | - | chr5_4:65057380-65057399 | Msa0864610:CDS | 50.0% | |
| CAAGGAAGGTCATCGGATAG+AGG | - | chr5_4:65057387-65057406 | Msa0864610:CDS | 50.0% | |
| TGTTCCATGCCACTAATCCC+AGG | + | chr5_4:65057612-65057631 | None:intergenic | 50.0% | |
| GCTTTCCCTATCTCATCTCC+TGG | - | chr5_4:65057648-65057667 | Msa0864610:CDS | 50.0% | |
| CAGCGGATGCTAGATATGAG+TGG | + | chr5_4:65057773-65057792 | None:intergenic | 50.0% | |
| CACTCATATCTAGCATCCGC+TGG | - | chr5_4:65057771-65057790 | Msa0864610:intron | 50.0% | |
| ! | CTAGCATCCGCTGGTATTGA+TGG | - | chr5_4:65057780-65057799 | Msa0864610:intron | 50.0% |
| GTCCTGCTCCAAGAGTTTCA+AGG | + | chr5_4:65057830-65057849 | None:intergenic | 50.0% | |
| GAAACTCTTGGAGCAGGACA+TGG | - | chr5_4:65057831-65057850 | Msa0864610:intron | 50.0% | |
| !! | CATTGGAGGCATCGATCACT+AGG | - | chr5_4:65057889-65057908 | Msa0864610:CDS | 50.0% |
| ATGTTGTGTAGCGACAAGCC+CGG | - | chr5_4:65058578-65058597 | Msa0864610:intron | 50.0% | |
| AGATTGAAGTCGTGGTGTCC+GGG | + | chr5_4:65058599-65058618 | None:intergenic | 50.0% | |
| ACTTCCAGGAAGACCAACCA+AGG | - | chr5_4:65058664-65058683 | Msa0864610:CDS | 50.0% | |
| !! | CAATCCTTGGTTGGTCTTCC+TGG | + | chr5_4:65058671-65058690 | None:intergenic | 50.0% |
| CTGGATTCTCGTCGTGGATA+AGG | + | chr5_4:65058914-65058933 | None:intergenic | 50.0% | |
| CTTATCCACGACGAGAATCC+AGG | - | chr5_4:65058912-65058931 | Msa0864610:intron | 50.0% | |
| ATGATGTCAGTGACTGTGCC+TGG | + | chr5_4:65058933-65058952 | None:intergenic | 50.0% | |
| GGAAAGATGACTGTAGGGGC+AGG | - | chr5_4:65055385-65055404 | Msa0864610:CDS | 55.0% | |
| GACCTTCCTTGCCGTCTTTC+TGG | + | chr5_4:65057378-65057397 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGGACTTGACTCC+AGG | + | chr5_4:65057669-65057688 | None:intergenic | 55.0% |
| ACTCTTGGAGCAGGACATGG+TGG | - | chr5_4:65057834-65057853 | Msa0864610:intron | 55.0% | |
| CTCTTGGAGCAGGACATGGT+GGG | - | chr5_4:65057835-65057854 | Msa0864610:intron | 55.0% | |
| GTGGGAGGGTGAAACTTGCA+AGG | - | chr5_4:65057853-65057872 | Msa0864610:CDS | 55.0% | |
| GTGTGAGATGCAGGGTCTCT+TGG | + | chr5_4:65058117-65058136 | None:intergenic | 55.0% | |
| CATGCTGCTGCAAGAGCAGT+TGG | - | chr5_4:65058338-65058357 | Msa0864610:intron | 55.0% | |
| ! | GGAGCTGGTTGGTGCAAAGT+TGG | - | chr5_4:65058879-65058898 | Msa0864610:CDS | 55.0% |
| ! | TCAATGAAAGTGCGCGGGTG+TGG | - | chr5_4:65059326-65059345 | Msa0864610:CDS | 55.0% |
| CCAAGGTGGTCCTACCTACG+CGG | - | chr5_4:65056084-65056103 | Msa0864610:intron | 60.0% | |
| TCGGATAGAGGACCCTGCCA+TGG | - | chr5_4:65057399-65057418 | Msa0864610:CDS | 60.0% | |
| CGGATAGAGGACCCTGCCAT+GGG | - | chr5_4:65057400-65057419 | Msa0864610:CDS | 60.0% | |
| ! | TTGGAGCAGGACATGGTGGG+AGG | - | chr5_4:65057838-65057857 | Msa0864610:intron | 60.0% |
| ! | TGGAGCAGGACATGGTGGGA+GGG | - | chr5_4:65057839-65057858 | Msa0864610:intron | 60.0% |
| GCTGCTGCAAGAGCAGTTGG+AGG | - | chr5_4:65058341-65058360 | Msa0864610:intron | 60.0% | |
| CTGTGCCTGGATTCTCGTCG+TGG | + | chr5_4:65058920-65058939 | None:intergenic | 60.0% | |
| CCGCGTAGGTAGGACCACCT+TGG | + | chr5_4:65056087-65056106 | None:intergenic | 65.0% | |
| ! | GTGCGCGGGTGTGGCCTTTT+CGG | - | chr5_4:65059335-65059354 | Msa0864610:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 65055272 | 65059564 | 65055272 | ID=Msa0864610;Name=Msa0864610 |
| chr5_4 | mRNA | 65055272 | 65059564 | 65055272 | ID=Msa0864610-mRNA-1;Parent=Msa0864610;Name=Msa0864610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=119|1|1|1|1|1|13|59|760 |
| chr5_4 | exon | 65055272 | 65055707 | 65055272 | ID=Msa0864610-mRNA-1:exon:20522;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65055801 | 65056018 | 65055801 | ID=Msa0864610-mRNA-1:exon:20521;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65056113 | 65056247 | 65056113 | ID=Msa0864610-mRNA-1:exon:20520;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65056455 | 65056522 | 65056455 | ID=Msa0864610-mRNA-1:exon:20519;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65056624 | 65056765 | 65056624 | ID=Msa0864610-mRNA-1:exon:20518;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65056866 | 65057276 | 65056866 | ID=Msa0864610-mRNA-1:exon:20517;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65057369 | 65057503 | 65057369 | ID=Msa0864610-mRNA-1:exon:20516;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65057610 | 65057717 | 65057610 | ID=Msa0864610-mRNA-1:exon:20515;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65057851 | 65057942 | 65057851 | ID=Msa0864610-mRNA-1:exon:20514;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65058053 | 65058101 | 65058053 | ID=Msa0864610-mRNA-1:exon:20513;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65058400 | 65058490 | 65058400 | ID=Msa0864610-mRNA-1:exon:20512;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65058646 | 65058911 | 65058646 | ID=Msa0864610-mRNA-1:exon:20511;Parent=Msa0864610-mRNA-1 |
| chr5_4 | exon | 65059255 | 65059564 | 65059255 | ID=Msa0864610-mRNA-1:exon:20510;Parent=Msa0864610-mRNA-1 |
| chr5_4 | five_prime_UTR | 65059446 | 65059564 | 65059446 | ID=Msa0864610-mRNA-1:five_prime_utr;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65059255 | 65059445 | 65059255 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65058646 | 65058911 | 65058646 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65058400 | 65058490 | 65058400 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65058053 | 65058101 | 65058053 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65057851 | 65057942 | 65057851 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65057610 | 65057717 | 65057610 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65057369 | 65057503 | 65057369 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65056866 | 65057276 | 65056866 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65056624 | 65056765 | 65056624 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65056455 | 65056522 | 65056455 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65056113 | 65056247 | 65056113 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65055801 | 65056018 | 65055801 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | CDS | 65055331 | 65055707 | 65055331 | ID=Msa0864610-mRNA-1:cds;Parent=Msa0864610-mRNA-1 |
| chr5_4 | three_prime_UTR | 65055272 | 65055330 | 65055272 | ID=Msa0864610-mRNA-1:three_prime_utr;Parent=Msa0864610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
