Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797080 | XP_003611429.1 | 98.535 | 546 | 3 | 2 | 1 | 543 | 1 | 544 | 0.0 | 1066 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797080 | sp|Q4V3C1|MED8_ARATH | 59.041 | 542 | 163 | 15 | 17 | 533 | 15 | 522 | 1.38e-176 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797080 | G7JYQ3 | 98.535 | 546 | 3 | 2 | 1 | 543 | 1 | 544 | 0.0 | 1066 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0755230 | Msa0797080 | 0.855583 | 5.723167e-62 | -8.615850e-47 |
| Msa0755240 | Msa0797080 | 0.860593 | 1.853565e-63 | -8.615850e-47 |
| Msa0797080 | Msa0860900 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0797080 | Msa1130670 | 0.828390 | 9.232189e-55 | -8.615850e-47 |
| Msa0797080 | Msa1434770 | 0.959513 | 1.589393e-117 | -8.615850e-47 |
| Msa0797080 | Msa1459760 | 0.803268 | 3.780790e-49 | -8.615850e-47 |
| Msa0125370 | Msa0797080 | 0.807454 | 5.014712e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797080 | MtrunA17_Chr5g0400151 | 98.535 | 546 | 3 | 2 | 1 | 543 | 1 | 544 | 0.0 | 1066 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797080 | AT2G03070.1 | 59.041 | 542 | 163 | 15 | 17 | 533 | 15 | 522 | 1.41e-177 | 511 |
Find 173 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTCTCCTCTCCTCTTTC+AGG | 0.120213 | 5_3:+9181556 | Msa0797080:five_prime_UTR |
| GTGTCCTCCGTCTCCATTTC+AGG | 0.165089 | 5_3:-9182551 | None:intergenic |
| TATCATACCATCTGGGTATT+TGG | 0.269319 | 5_3:-9185526 | None:intergenic |
| TTGTCTCTGTTGAGTGAAAT+TGG | 0.271464 | 5_3:-9186446 | None:intergenic |
| GAACTTTCATTCAAGCAAAA+AGG | 0.277850 | 5_3:+9181462 | Msa0797080:five_prime_UTR |
| TTTCCTCAGTTCGGATTATC+TGG | 0.280883 | 5_3:+9186125 | Msa0797080:intron |
| CCCATTGTCATCAAACAGTA+TGG | 0.282447 | 5_3:+9183447 | Msa0797080:CDS |
| CCGAGAATATCTTGCCATTT+GGG | 0.284417 | 5_3:-9182306 | None:intergenic |
| TACTTTGATCACTCAACATA+TGG | 0.299259 | 5_3:-9186175 | None:intergenic |
| CGGCCAGAATTCGTTGTTAC+AGG | 0.300437 | 5_3:+9183471 | Msa0797080:CDS |
| CTGAACTGGATAAAATAAAT+AGG | 0.302780 | 5_3:+9186588 | Msa0797080:three_prime_UTR |
| GACATCGGGATCACAACTTT+TGG | 0.306864 | 5_3:+9184151 | Msa0797080:intron |
| TGCTGCTGTGGCTGCGGTTG+TGG | 0.310705 | 5_3:-9182153 | None:intergenic |
| GAAGAGAGATCAATTGCTTC+AGG | 0.311069 | 5_3:+9182577 | Msa0797080:CDS |
| ACTTGGGCATCAGCAATTTC+AGG | 0.315300 | 5_3:+9185369 | Msa0797080:CDS |
| AGCTGTTGCGGCTGCGGTTG+TGG | 0.325380 | 5_3:-9184311 | None:intergenic |
| GCTGTTGCGGCTGCGGTTGT+GGG | 0.337691 | 5_3:-9184310 | None:intergenic |
| ATTTGTTTGTGGTCTAGCTT+TGG | 0.339490 | 5_3:+9182045 | Msa0797080:five_prime_UTR |
| ACCGAGAATATCTTGCCATT+TGG | 0.342009 | 5_3:-9182307 | None:intergenic |
| GCATTTGGCAGACGCATTTA+CGG | 0.343291 | 5_3:+9183273 | Msa0797080:CDS |
| CACGGTTCACAAGGTGCATT+TGG | 0.343997 | 5_3:+9186352 | Msa0797080:CDS |
| GTTATTCCGGCTGAAATGTT+TGG | 0.348624 | 5_3:-9185754 | None:intergenic |
| TTGCTGTTGCTGCTGCTGTA+TGG | 0.350370 | 5_3:-9186317 | None:intergenic |
| ATCTTCGAGAATCCTTGATA+TGG | 0.350670 | 5_3:-9182253 | None:intergenic |
| GAGAGCGACGGTTGTGTTGC+TGG | 0.355626 | 5_3:-9181526 | None:intergenic |
| TTTACATAATCTAAACAGTT+TGG | 0.362532 | 5_3:-9186554 | None:intergenic |
| CACGTGTCTTTACTTGTTCT+AGG | 0.362677 | 5_3:-9182212 | None:intergenic |
| CAGTACTCTATATTTGTTTG+TGG | 0.365036 | 5_3:+9182034 | Msa0797080:intron |
| ACAACCGCAGCCACAGCAGC+AGG | 0.370395 | 5_3:+9182155 | Msa0797080:CDS |
| CTCCCATTGTCAATCTTTGA+AGG | 0.375949 | 5_3:+9181427 | Msa0797080:five_prime_UTR |
| TGCTTCACTTCCTATGCATT+TGG | 0.378719 | 5_3:+9183258 | Msa0797080:CDS |
| TGTAGTAGACCTAGGTGAAT+TGG | 0.385584 | 5_3:-9184252 | None:intergenic |
| AGAACAAGAGTTGTTGCGTT+GGG | 0.392764 | 5_3:+9182072 | Msa0797080:five_prime_UTR |
| AAGAGACTGTGAAGTTATTC+CGG | 0.394449 | 5_3:-9185767 | None:intergenic |
| ACTCGTAAAGCTTACTGCTT+TGG | 0.396336 | 5_3:+9182776 | Msa0797080:CDS |
| ATCTGCGATGCAACAAGGAC+TGG | 0.397379 | 5_3:+9184430 | Msa0797080:CDS |
| GCCTGACCCTTGTCGAGAGT+GGG | 0.400714 | 5_3:-9182824 | None:intergenic |
| TTGTCAATTTGAGTGGCAAT+TGG | 0.405340 | 5_3:-9182614 | None:intergenic |
| TTACTGCTTTGGAACTCGTC+AGG | 0.408084 | 5_3:+9182787 | Msa0797080:CDS |
| GGCTGCCAAAATTCAAGAAC+AGG | 0.413781 | 5_3:+9182844 | Msa0797080:CDS |
| ACAACAAAATCAACAGTGAT+AGG | 0.416780 | 5_3:+9186465 | Msa0797080:exon |
| TGTTAGCAGGACCAGAAAAC+TGG | 0.417669 | 5_3:-9185474 | None:intergenic |
| TCTGATTTCCTTGATTGAGT+TGG | 0.418871 | 5_3:-9185438 | None:intergenic |
| CCATACTGTTTGATGACAAT+GGG | 0.419535 | 5_3:-9183447 | None:intergenic |
| CCCCACTCTCGACAAGGGTC+AGG | 0.419879 | 5_3:+9182823 | Msa0797080:CDS |
| TTAGCTGCTGCTGCACAGCC+TGG | 0.425082 | 5_3:-9182188 | None:intergenic |
| GACGGTTGTGTTGCTGGGTT+CGG | 0.430979 | 5_3:-9181520 | None:intergenic |
| CACAAAACTACTCCCTGAAA+TGG | 0.431352 | 5_3:+9182538 | Msa0797080:CDS |
| TCCTTGATATGGCTTTGAAC+AGG | 0.432047 | 5_3:-9182242 | None:intergenic |
| GGTTGTGGGGTTTGCTGCTG+AGG | 0.432496 | 5_3:-9184296 | None:intergenic |
| CACTCAAATTGACAAGTTGA+AGG | 0.433896 | 5_3:+9182622 | Msa0797080:CDS |
| GTTGTGGGGTTTGCTGCTGA+GGG | 0.434312 | 5_3:-9184295 | None:intergenic |
| TTCTTTCCTCCACAGTTGCA+CGG | 0.437454 | 5_3:+9185319 | Msa0797080:intron |
| GGGGTTTGCTGCTGAGGGGA+TGG | 0.439868 | 5_3:-9184290 | None:intergenic |
| AAGCAATTGATCTCTCTTCA+AGG | 0.442850 | 5_3:-9182573 | None:intergenic |
| TGTCTCTGTTGAGTGAAATT+GGG | 0.443091 | 5_3:-9186445 | None:intergenic |
| TGTCAATTTGAGTGGCAATT+GGG | 0.447720 | 5_3:-9182613 | None:intergenic |
| CTCTCCTGCTGCTGTGGCTG+CGG | 0.451069 | 5_3:-9182159 | None:intergenic |
| TGGGTTCGGTGAATCCAAAA+AGG | 0.454233 | 5_3:-9181506 | None:intergenic |
| GTCTCTTCTGCCACGAATGC+AGG | 0.459241 | 5_3:+9185783 | Msa0797080:CDS |
| CTAAATAACGCGCTGTTAGC+AGG | 0.459443 | 5_3:-9185487 | None:intergenic |
| CCCAAATGGCAAGATATTCT+CGG | 0.462937 | 5_3:+9182306 | Msa0797080:CDS |
| TCAGGGCAGACAGCTTTCTT+CGG | 0.462975 | 5_3:+9185387 | Msa0797080:CDS |
| TTGCCATTTGGGATTGGTGT+TGG | 0.464040 | 5_3:-9182295 | None:intergenic |
| AGCCTGACCCTTGTCGAGAG+TGG | 0.466984 | 5_3:-9182825 | None:intergenic |
| AAGAAGAATGGAGGGTGAGT+TGG | 0.468484 | 5_3:+9182122 | Msa0797080:exon |
| GCTGTTAGCTGTTGCGGCTG+CGG | 0.473874 | 5_3:-9184317 | None:intergenic |
| GTTATATGCCTCTGGTCTCC+AGG | 0.475049 | 5_3:-9183235 | None:intergenic |
| AATATCTTGCCATTTGGGAT+TGG | 0.476173 | 5_3:-9182301 | None:intergenic |
| AGAGCGACGGTTGTGTTGCT+GGG | 0.481027 | 5_3:-9181525 | None:intergenic |
| AGACCTGTAACAACGAATTC+TGG | 0.481339 | 5_3:-9183474 | None:intergenic |
| AACAGAAAAGGGAAGAAGAA+TGG | 0.483514 | 5_3:+9182110 | Msa0797080:exon |
| GACCTAGGTGAATTGGCATA+TGG | 0.484019 | 5_3:-9184245 | None:intergenic |
| TTACTATTGCTAGACCCATC+AGG | 0.484047 | 5_3:-9183319 | None:intergenic |
| CTCCGAGCTGCCGTCAATGT+TGG | 0.490242 | 5_3:+9182875 | Msa0797080:CDS |
| GGTGAATTGGCATATGGAAT+TGG | 0.494091 | 5_3:-9184239 | None:intergenic |
| ATTACCCTCGCCAACATTGA+CGG | 0.494223 | 5_3:-9182885 | None:intergenic |
| CAACGATGTTGAAGAGTTCG+AGG | 0.494924 | 5_3:-9182347 | None:intergenic |
| AACCTTCAAAGATTGACAAT+GGG | 0.496685 | 5_3:-9181429 | None:intergenic |
| GTGAAGCAGTTATATGCCTC+TGG | 0.497013 | 5_3:-9183243 | None:intergenic |
| TTGGGACGGACAAACAGAAA+AGG | 0.498119 | 5_3:+9182098 | Msa0797080:five_prime_UTR |
| TCTTTCCTCCACAGTTGCAC+GGG | 0.498397 | 5_3:+9185320 | Msa0797080:intron |
| TATGCAGGATTGCGGATACC+TGG | 0.498863 | 5_3:+9183217 | Msa0797080:intron |
| GCGCATATGCAGCATGGCAT+TGG | 0.503430 | 5_3:+9185409 | Msa0797080:CDS |
| AAGAGAGATCAATTGCTTCA+GGG | 0.503853 | 5_3:+9182578 | Msa0797080:CDS |
| TGAGAACTAACCTGCATTCG+TGG | 0.504128 | 5_3:-9185793 | None:intergenic |
| GGGATAGACTATGAAAGCCT+TGG | 0.507245 | 5_3:-9182388 | None:intergenic |
| ACTTTGATCACTCAACATAT+GGG | 0.508945 | 5_3:-9186174 | None:intergenic |
| TTCTTGCTCAGCAACAATAC+AGG | 0.509421 | 5_3:+9184405 | Msa0797080:CDS |
| TTCAATCTCTCCTGCTGCTG+TGG | 0.510122 | 5_3:-9182165 | None:intergenic |
| TCTGCGATGCAACAAGGACT+GGG | 0.511563 | 5_3:+9184431 | Msa0797080:CDS |
| GCAGTAAGCTTTACGAGTAT+CGG | 0.512083 | 5_3:-9182771 | None:intergenic |
| TGTCCTCCGTCTCCATTTCA+GGG | 0.512223 | 5_3:-9182550 | None:intergenic |
| AACATGGGAGGTGGCAACCC+TGG | 0.516684 | 5_3:+9186283 | Msa0797080:CDS |
| GCCTGTTCAAAGCCATATCA+AGG | 0.519288 | 5_3:+9182241 | Msa0797080:CDS |
| CAGATTCCAAACATTTCAGC+CGG | 0.522571 | 5_3:+9185748 | Msa0797080:intron |
| ACAAGGTGCATTTGGTGGCA+TGG | 0.523211 | 5_3:+9186360 | Msa0797080:CDS |
| TAACCTTCAAAGATTGACAA+TGG | 0.528988 | 5_3:-9181430 | None:intergenic |
| CCCATACTGTTTGATGACAA+TGG | 0.529491 | 5_3:-9183448 | None:intergenic |
| CACAACAACAGCAACAACAA+CGG | 0.529656 | 5_3:+9184339 | Msa0797080:CDS |
| CTTGGGCATCAGCAATTTCA+GGG | 0.531616 | 5_3:+9185370 | Msa0797080:CDS |
| GGTCAAAGCCAACTCAATCA+AGG | 0.532163 | 5_3:+9185430 | Msa0797080:CDS |
| CTTCAACTTGTCAATTTGAG+TGG | 0.538033 | 5_3:-9182621 | None:intergenic |
| TTTCAAAACTGACCTGAAAG+AGG | 0.539248 | 5_3:-9181568 | None:intergenic |
| CGCCAACATTGACGGCAGCT+CGG | 0.539687 | 5_3:-9182877 | None:intergenic |
| TACTGCTTTGGAACTCGTCA+GGG | 0.540137 | 5_3:+9182788 | Msa0797080:CDS |
| CAACAACAACACGGTTCACA+AGG | 0.540323 | 5_3:+9186343 | Msa0797080:CDS |
| AGCTGCCGTCAATGTTGGCG+AGG | 0.541335 | 5_3:+9182880 | Msa0797080:CDS |
| CCTGACCCTTGTCGAGAGTG+GGG | 0.542610 | 5_3:-9182823 | None:intergenic |
| GTGGCGCTGGTTGCAGCAGA+AGG | 0.547495 | 5_3:-9184191 | None:intergenic |
| TCTTCGGCGCATATGCAGCA+TGG | 0.548116 | 5_3:+9185403 | Msa0797080:CDS |
| GCACCAACACCAATCCCAAA+TGG | 0.548274 | 5_3:+9182292 | Msa0797080:CDS |
| CTGTTGCGGCTGCGGTTGTG+GGG | 0.548689 | 5_3:-9184309 | None:intergenic |
| ATTGGTGTTGGTGCGACCAT+AGG | 0.549446 | 5_3:-9182283 | None:intergenic |
| AGGAGAGGAGAGGAGAGGAG+AGG | 0.549486 | 5_3:-9181548 | None:intergenic |
| TTATTGCTAATGTAGACATC+GGG | 0.550611 | 5_3:+9184137 | Msa0797080:intron |
| AGAAGTTGTTGCTGCTGCTG+TGG | 0.555587 | 5_3:-9184386 | None:intergenic |
| AGAAAAGGGAAGAAGAATGG+AGG | 0.563772 | 5_3:+9182113 | Msa0797080:exon |
| TGGGACGGACAAACAGAAAA+GGG | 0.568316 | 5_3:+9182099 | Msa0797080:five_prime_UTR |
| GAAAAGGGAAGAAGAATGGA+GGG | 0.569108 | 5_3:+9182114 | Msa0797080:exon |
| TGTTGTATTGTCAAAAGAAG+TGG | 0.570342 | 5_3:-9184210 | None:intergenic |
| GAACAAGAGTTGTTGCGTTG+GGG | 0.571993 | 5_3:+9182073 | Msa0797080:five_prime_UTR |
| GTTGTGGAGAAAACTGCATC+TGG | 0.572530 | 5_3:-9185348 | None:intergenic |
| TGTTGTGCTGTTAGCTGTTG+CGG | 0.572810 | 5_3:-9184323 | None:intergenic |
| GGTTCACAAGGTGCATTTGG+TGG | 0.572846 | 5_3:+9186355 | Msa0797080:CDS |
| GTTCTGAAGCGTCATCATAC+CGG | 0.573162 | 5_3:-9186407 | None:intergenic |
| AGAGAGATCAATTGCTTCAG+GGG | 0.573210 | 5_3:+9182579 | Msa0797080:CDS |
| GAGAACAAGAGTTGTTGCGT+TGG | 0.573403 | 5_3:+9182071 | Msa0797080:five_prime_UTR |
| CAATTTGAGTGGCAATTGGG+AGG | 0.573668 | 5_3:-9182610 | None:intergenic |
| GATGCAACAAGGACTGGGGC+AGG | 0.575387 | 5_3:+9184436 | Msa0797080:CDS |
| AACAAGAGTTGTTGCGTTGG+GGG | 0.575528 | 5_3:+9182074 | Msa0797080:five_prime_UTR |
| AATGCTCAGAATCTACAATC+CGG | 0.577713 | 5_3:+9186388 | Msa0797080:CDS |
| GCAGCAGGAGAGATTGAACC+AGG | 0.579066 | 5_3:+9182170 | Msa0797080:CDS |
| TATTCTCGGTCAGTATTCCA+TGG | 0.581948 | 5_3:+9182320 | Msa0797080:CDS |
| TACATTGCAGTGTTCAACAT+GGG | 0.582708 | 5_3:+9186268 | Msa0797080:intron |
| GCAGTGTTCAACATGGGAGG+TGG | 0.582930 | 5_3:+9186274 | Msa0797080:intron |
| ATGATTGCTGCAGCCTGTGA+AGG | 0.588963 | 5_3:+9182731 | Msa0797080:CDS |
| ATCATATTTGTAGTAGACCT+AGG | 0.594694 | 5_3:-9184260 | None:intergenic |
| AGTTGTTGCTGCTGCTGTGG+AGG | 0.600661 | 5_3:-9184383 | None:intergenic |
| TTGTGGGGTTTGCTGCTGAG+GGG | 0.603274 | 5_3:-9184294 | None:intergenic |
| CCATTGTCATCAAACAGTAT+GGG | 0.604245 | 5_3:+9183448 | Msa0797080:CDS |
| TTACATTGCAGTGTTCAACA+TGG | 0.605122 | 5_3:+9186267 | Msa0797080:intron |
| TGTATGGACATCATACCACC+AGG | 0.608190 | 5_3:-9186301 | None:intergenic |
| AATGCGTCTGCCAAATGCAT+AGG | 0.612188 | 5_3:-9183268 | None:intergenic |
| CGATATCAAGAAGGTCTCCA+AGG | 0.613029 | 5_3:+9182371 | Msa0797080:CDS |
| CATCGTTGACGATATCAAGA+AGG | 0.615371 | 5_3:+9182362 | Msa0797080:CDS |
| GAAGAGTTCGAGGTTGACCA+TGG | 0.618217 | 5_3:-9182337 | None:intergenic |
| CTGACCCTTGTCGAGAGTGG+GGG | 0.620202 | 5_3:-9182822 | None:intergenic |
| AATTGCTGATGCCCAAGTTG+TGG | 0.621813 | 5_3:-9185364 | None:intergenic |
| ATTGTCAAAAGAAGTGGCGC+TGG | 0.624557 | 5_3:-9184204 | None:intergenic |
| TGATCACTCAACATATGGGA+AGG | 0.626243 | 5_3:-9186170 | None:intergenic |
| GCTGCCGTCAATGTTGGCGA+GGG | 0.627131 | 5_3:+9182881 | Msa0797080:CDS |
| AGGAGAGGAGAGGAGAGCGA+CGG | 0.630646 | 5_3:-9181538 | None:intergenic |
| GAAAGAGGAGAGGAGAGGAG+AGG | 0.631913 | 5_3:-9181553 | None:intergenic |
| AACAACACCAAATACCCAGA+TGG | 0.635232 | 5_3:+9185519 | Msa0797080:CDS |
| ACATGCCTATCATACCATCT+GGG | 0.636329 | 5_3:-9185533 | None:intergenic |
| ATGGAACTTATGCAGGATTG+CGG | 0.642741 | 5_3:+9183209 | Msa0797080:intron |
| ACTACTCCCTGAAATGGAGA+CGG | 0.653887 | 5_3:+9182544 | Msa0797080:CDS |
| TTGTCATCAAACAGTATGGG+CGG | 0.656744 | 5_3:+9183451 | Msa0797080:CDS |
| AAACTGACCTGAAAGAGGAG+AGG | 0.660851 | 5_3:-9181563 | None:intergenic |
| TGCGGATACCTGGAGACCAG+AGG | 0.661175 | 5_3:+9183227 | Msa0797080:CDS |
| AGGCAATCTGCGATGCAACA+AGG | 0.665568 | 5_3:+9184425 | Msa0797080:CDS |
| ATTGCAGTGTTCAACATGGG+AGG | 0.667880 | 5_3:+9186271 | Msa0797080:intron |
| CAGCAACAGCAACAACAACA+CGG | 0.675990 | 5_3:+9186334 | Msa0797080:CDS |
| CTGCGATGCAACAAGGACTG+GGG | 0.678827 | 5_3:+9184432 | Msa0797080:CDS |
| GCTTGAATGAAAGTTCTGAG+AGG | 0.683893 | 5_3:-9181455 | None:intergenic |
| ATGGGAGGTGGCAACCCTGG+TGG | 0.686293 | 5_3:+9186286 | Msa0797080:CDS |
| ACTCCCTGAAATGGAGACGG+AGG | 0.689060 | 5_3:+9182547 | Msa0797080:CDS |
| TTCCATATGCCAATTCACCT+AGG | 0.690920 | 5_3:+9184243 | Msa0797080:CDS |
| GACCTGAAAGAGGAGAGGAG+AGG | 0.724155 | 5_3:-9181558 | None:intergenic |
| TGGGAAGGATGACTTCGCTG+AGG | 0.728701 | 5_3:-9186155 | None:intergenic |
| CATACTGTTTGATGACAATG+GGG | 0.738036 | 5_3:-9183446 | None:intergenic |
| GTATGGACATCATACCACCA+GGG | 0.773270 | 5_3:-9186300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTAAAAAA+TGG | + | chr5_3:9185989-9186008 | Msa0797080:intron | 0.0% |
| !! | AATATATTTATTATAGTACA+AGG | - | chr5_3:9182928-9182947 | None:intergenic | 10.0% |
| !!! | ATTATAAAATCCAAATATTT+TGG | - | chr5_3:9183369-9183388 | None:intergenic | 10.0% |
| !!! | TTTTTTAATACTGTAAATAA+AGG | + | chr5_3:9183558-9183577 | Msa0797080:intron | 10.0% |
| !!! | TTTTTAATACTGTAAATAAA+GGG | + | chr5_3:9183559-9183578 | Msa0797080:intron | 10.0% |
| !!! | GAAAAAATTTCTATATTTTT+CGG | - | chr5_3:9184721-9184740 | None:intergenic | 10.0% |
| !! | ACTTAATATTTAACAATAAA+AGG | - | chr5_3:9184837-9184856 | None:intergenic | 10.0% |
| !!! | GAAAATAATATTTTTAAACA+GGG | - | chr5_3:9185623-9185642 | None:intergenic | 10.0% |
| !!! | TGAAAATAATATTTTTAAAC+AGG | - | chr5_3:9185624-9185643 | None:intergenic | 10.0% |
| !!! | AAAAAGTAAATATTTGAAGT+TGG | + | chr5_3:9181836-9181855 | Msa0797080:intron | 15.0% |
| !!! | TTTCAAACAAAATGTTTTTA+TGG | + | chr5_3:9181906-9181925 | Msa0797080:intron | 15.0% |
| !!! | TTCAAACAAAATGTTTTTAT+GGG | + | chr5_3:9181907-9181926 | Msa0797080:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAGGTAT+AGG | + | chr5_3:9181932-9181951 | Msa0797080:intron | 15.0% |
| !!! | ACAAACAAAAATTTTATTCA+AGG | - | chr5_3:9183120-9183139 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTTTGGATATAA+TGG | + | chr5_3:9183190-9183209 | Msa0797080:intron | 15.0% |
| !! | AAAATTAAAATATGAGACTA+TGG | - | chr5_3:9183688-9183707 | None:intergenic | 15.0% |
| !!! | GTTAATTTTATTTGTTAACA+AGG | - | chr5_3:9184765-9184784 | None:intergenic | 15.0% |
| !!! | TGTTTTTTACAAAAAACATA+AGG | - | chr5_3:9184870-9184889 | None:intergenic | 15.0% |
| !! | CAATAGTTTAGAAATAAAAT+GGG | - | chr5_3:9185083-9185102 | None:intergenic | 15.0% |
| !!! | CATTTTATTTCTAAACTATT+GGG | + | chr5_3:9185082-9185101 | Msa0797080:intron | 15.0% |
| !! | AAAAAAAAAAAAAACTGAAC+TGG | + | chr5_3:9186574-9186593 | Msa0797080:three_prime_UTR | 15.0% |
| !!! | AAAATAAATAGGATTCTTTT+TGG | + | chr5_3:9186599-9186618 | Msa0797080:three_prime_UTR | 15.0% |
| !!! | AAATAAATAGGATTCTTTTT+GGG | + | chr5_3:9186600-9186619 | Msa0797080:three_prime_UTR | 15.0% |
| !!! | TGAAATTGATTTTAACCTTT+AGG | + | chr5_3:9181688-9181707 | Msa0797080:intron | 20.0% |
| !!! | GAAATTGATTTTAACCTTTA+GGG | + | chr5_3:9181689-9181708 | Msa0797080:intron | 20.0% |
| !!! | TACTTTTTTCCCTTTTATTA+TGG | - | chr5_3:9181824-9181843 | None:intergenic | 20.0% |
| !!! | TGGGATTTTTTTTTTTTTTG+AGG | + | chr5_3:9181926-9181945 | Msa0797080:intron | 20.0% |
| !! | ATATTTATTATAGTACAAGG+CGG | - | chr5_3:9182925-9182944 | None:intergenic | 20.0% |
| !! | GAACTAAAATTTCTTTCATA+TGG | + | chr5_3:9182997-9183016 | Msa0797080:intron | 20.0% |
| !!! | TCTTTTTGGTGATTTTTTTT+TGG | + | chr5_3:9183181-9183200 | Msa0797080:intron | 20.0% |
| !! | AAAAATAATAGGATTAGATG+AGG | - | chr5_3:9183810-9183829 | None:intergenic | 20.0% |
| !! | CTCATCTATAGAAAAATAAT+AGG | - | chr5_3:9183821-9183840 | None:intergenic | 20.0% |
| !!! | ATTATTTTTCTATAGATGAG+AGG | + | chr5_3:9183821-9183840 | Msa0797080:intron | 20.0% |
| !! | ATTCAATAGGTTTAAAAGTT+CGG | - | chr5_3:9184035-9184054 | None:intergenic | 20.0% |
| !!! | AAATCTTTTCACAAAGTAAA+CGG | + | chr5_3:9184809-9184828 | Msa0797080:intron | 20.0% |
| !! | CCAATAGTTTAGAAATAAAA+TGG | - | chr5_3:9185084-9185103 | None:intergenic | 20.0% |
| !!! | CCATTTTATTTCTAAACTAT+TGG | + | chr5_3:9185081-9185100 | Msa0797080:intron | 20.0% |
| !! | TTATGTTATTGTTTACTTGT+TGG | - | chr5_3:9185573-9185592 | None:intergenic | 20.0% |
| !!! | AATAATATTTTTAAACAGGG+TGG | - | chr5_3:9185620-9185639 | None:intergenic | 20.0% |
| !!! | TTAGTTCTCATTGTTTTTTT+TGG | + | chr5_3:9185806-9185825 | Msa0797080:intron | 20.0% |
| !!! | TAAAAAATGGATTTTTGTGA+TGG | + | chr5_3:9186002-9186021 | Msa0797080:intron | 20.0% |
| !!! | AAAAAATGGATTTTTGTGAT+GGG | + | chr5_3:9186003-9186022 | Msa0797080:intron | 20.0% |
| !!! | TTGTTTTTTCTTTGTTCTTT+TGG | + | chr5_3:9186527-9186546 | Msa0797080:three_prime_UTR | 20.0% |
| !! | TTTACATAATCTAAACAGTT+TGG | - | chr5_3:9186557-9186576 | None:intergenic | 20.0% |
| !! | GAATTGATAGTAATTGAATC+AGG | + | chr5_3:9181613-9181632 | Msa0797080:intron | 25.0% |
| ! | ACCATATCAACCATAATAAA+AGG | + | chr5_3:9181811-9181830 | Msa0797080:intron | 25.0% |
| ! | CCATATCAACCATAATAAAA+GGG | + | chr5_3:9181812-9181831 | Msa0797080:intron | 25.0% |
| !! | TATTTGAAGTTGGATTATGT+TGG | + | chr5_3:9181846-9181865 | Msa0797080:intron | 25.0% |
| !! | ATTTGAAGTTGGATTATGTT+GGG | + | chr5_3:9181847-9181866 | Msa0797080:intron | 25.0% |
| !! | ATTTTCCTGTTCTTGAATTT+TGG | - | chr5_3:9182852-9182871 | None:intergenic | 25.0% |
| !! | ACAAAAATTTTATTCAAGGC+AGG | - | chr5_3:9183116-9183135 | None:intergenic | 25.0% |
| !! | CTCTAAATCTGTATTCTTTT+TGG | + | chr5_3:9183167-9183186 | Msa0797080:intron | 25.0% |
| !!! | AAATCCAAATATTTTGGAGA+TGG | - | chr5_3:9183363-9183382 | None:intergenic | 25.0% |
| ! | TAGTATATATAAATGCCACT+CGG | - | chr5_3:9183398-9183417 | None:intergenic | 25.0% |
| !! | ATTGTGGTTACTTATGATTT+TGG | + | chr5_3:9183591-9183610 | Msa0797080:intron | 25.0% |
| ! | ATATTTCAAAATCGCAAAAC+CGG | - | chr5_3:9183658-9183677 | None:intergenic | 25.0% |
| ! | ACGAAAGGTAAAAATCAAAT+AGG | - | chr5_3:9183997-9184016 | None:intergenic | 25.0% |
| !! | GTAATTAGTTCTCATTCAAT+AGG | - | chr5_3:9184048-9184067 | None:intergenic | 25.0% |
| ! | TGAGAACTAATTACTTCATT+TGG | + | chr5_3:9184054-9184073 | Msa0797080:intron | 25.0% |
| ! | ATTATTGCTAATGTAGACAT+CGG | + | chr5_3:9184136-9184155 | Msa0797080:intron | 25.0% |
| !!! | TCTACTTTAACTAGTCTTTT+AGG | - | chr5_3:9184514-9184533 | None:intergenic | 25.0% |
| !! | AATCTTTTCACAAAGTAAAC+GGG | + | chr5_3:9184810-9184829 | Msa0797080:intron | 25.0% |
| ! | ATAACTTTGTGATATACTGT+TGG | + | chr5_3:9185186-9185205 | Msa0797080:intron | 25.0% |
| ! | TAACTTTGTGATATACTGTT+GGG | + | chr5_3:9185187-9185206 | Msa0797080:intron | 25.0% |
| !!! | TATGAACACACATGTTTTTA+TGG | - | chr5_3:9185224-9185243 | None:intergenic | 25.0% |
| ! | ATCATAGAAGTAATTGTTGA+AGG | - | chr5_3:9185709-9185728 | None:intergenic | 25.0% |
| !! | TTTTGTCAGATTAGAATAGA+AGG | + | chr5_3:9185837-9185856 | Msa0797080:intron | 25.0% |
| ! | AAATAGAATAAATGACAGTG+AGG | - | chr5_3:9186212-9186231 | None:intergenic | 25.0% |
| ! | CTGAACTGGATAAAATAAAT+AGG | + | chr5_3:9186588-9186607 | Msa0797080:three_prime_UTR | 25.0% |
| !!! | TCTTTTTGATTTCAGTACTT+TGG | - | chr5_3:9186709-9186728 | None:intergenic | 25.0% |
| AACCTTCAAAGATTGACAAT+GGG | - | chr5_3:9181432-9181451 | None:intergenic | 30.0% | |
| TAACCTTCAAAGATTGACAA+TGG | - | chr5_3:9181433-9181452 | None:intergenic | 30.0% | |
| GAACTTTCATTCAAGCAAAA+AGG | + | chr5_3:9181462-9181481 | Msa0797080:five_prime_UTR | 30.0% | |
| !! | CCCTTTTATTATGGTTGATA+TGG | - | chr5_3:9181815-9181834 | None:intergenic | 30.0% |
| ! | TTTGAGGTATAGGATAATCA+TGG | + | chr5_3:9181942-9181961 | Msa0797080:intron | 30.0% |
| GTACTGCAGAATAGAATAAA+AGG | - | chr5_3:9182020-9182039 | None:intergenic | 30.0% | |
| CAGTACTCTATATTTGTTTG+TGG | + | chr5_3:9182034-9182053 | Msa0797080:intron | 30.0% | |
| ! | GTTCATACTTGTAGCATTTT+CGG | - | chr5_3:9182427-9182446 | None:intergenic | 30.0% |
| ! | ATGGTGATTTGAAATGTGAA+TGG | - | chr5_3:9182483-9182502 | None:intergenic | 30.0% |
| ! | GTACTGATAAAACATTGTCA+TGG | - | chr5_3:9182502-9182521 | None:intergenic | 30.0% |
| ATACAGATTTAGAGAGTGAT+AGG | - | chr5_3:9183161-9183180 | None:intergenic | 30.0% | |
| ! | TTTTATAATTTGACTCCGAG+TGG | + | chr5_3:9183380-9183399 | Msa0797080:intron | 30.0% |
| !! | TTCGATGAAGGTTTTATGAA+TGG | + | chr5_3:9183509-9183528 | Msa0797080:intron | 30.0% |
| ! | TAAAGGGTATATGTGAATTG+TGG | + | chr5_3:9183575-9183594 | Msa0797080:intron | 30.0% |
| ATGGGGACAAACTAATTTAT+TGG | + | chr5_3:9183942-9183961 | Msa0797080:intron | 30.0% | |
| TGGGGACAAACTAATTTATT+GGG | + | chr5_3:9183943-9183962 | Msa0797080:intron | 30.0% | |
| CAAACTAATTTATTGGGAGA+AGG | + | chr5_3:9183949-9183968 | Msa0797080:intron | 30.0% | |
| AAAATCAAATAGGCTAGATG+AGG | - | chr5_3:9183987-9184006 | None:intergenic | 30.0% | |
| GAACTAATTACTTCATTTGG+TGG | + | chr5_3:9184057-9184076 | Msa0797080:intron | 30.0% | |
| TTATTGCTAATGTAGACATC+GGG | + | chr5_3:9184137-9184156 | Msa0797080:intron | 30.0% | |
| TGTTGTATTGTCAAAAGAAG+TGG | - | chr5_3:9184213-9184232 | None:intergenic | 30.0% | |
| ATCATATTTGTAGTAGACCT+AGG | - | chr5_3:9184263-9184282 | None:intergenic | 30.0% | |
| !! | TAGTCTTTTAGGTCATTTCA+GGG | - | chr5_3:9184503-9184522 | None:intergenic | 30.0% |
| ! | TGTTTTTCGCAAAGTAAACA+AGG | - | chr5_3:9184537-9184556 | None:intergenic | 30.0% |
| AGTTAGAGATGATACATTAC+TGG | + | chr5_3:9184657-9184676 | Msa0797080:intron | 30.0% | |
| AGAGATGATTATCAAACGTA+AGG | - | chr5_3:9184897-9184916 | None:intergenic | 30.0% | |
| ! | TTACGTTTGATAATCATCTC+TGG | + | chr5_3:9184896-9184915 | Msa0797080:intron | 30.0% |
| ! | TTTAGTGAAGCTCTATTTCT+TGG | - | chr5_3:9185036-9185055 | None:intergenic | 30.0% |
| TATGTTTCTCGTTTCTTTCT+TGG | + | chr5_3:9185283-9185302 | Msa0797080:intron | 30.0% | |
| ! | GGAAAGCAAATTAAGAGTAT+GGG | - | chr5_3:9185688-9185707 | None:intergenic | 30.0% |
| AGGAAAGCAAATTAAGAGTA+TGG | - | chr5_3:9185689-9185708 | None:intergenic | 30.0% | |
| TGATTTATCCATGATGTTCT+TGG | + | chr5_3:9185879-9185898 | Msa0797080:intron | 30.0% | |
| ATAAATCACAAAGTACAACG+TGG | - | chr5_3:9185971-9185990 | None:intergenic | 30.0% | |
| CACAACTATTCATTCTATAC+TGG | - | chr5_3:9186040-9186059 | None:intergenic | 30.0% | |
| TGTTATCCACATATGATCAA+AGG | - | chr5_3:9186083-9186102 | None:intergenic | 30.0% | |
| !!! | CATGTTTTATTTCCTCAGTT+CGG | + | chr5_3:9186116-9186135 | Msa0797080:intron | 30.0% |
| ACTTTGATCACTCAACATAT+GGG | - | chr5_3:9186177-9186196 | None:intergenic | 30.0% | |
| TACTTTGATCACTCAACATA+TGG | - | chr5_3:9186178-9186197 | None:intergenic | 30.0% | |
| ACAACAAAATCAACAGTGAT+AGG | + | chr5_3:9186465-9186484 | Msa0797080:exon | 30.0% | |
| TTTCAAAACTGACCTGAAAG+AGG | - | chr5_3:9181571-9181590 | None:intergenic | 35.0% | |
| ! | TTTTGCTTCCAATATCAGTG+AGG | - | chr5_3:9181718-9181737 | None:intergenic | 35.0% |
| GAAACTGAAAACTGAAAACG+TGG | + | chr5_3:9181964-9181983 | Msa0797080:intron | 35.0% | |
| AAAGGTTAATCACACATCAG+AGG | - | chr5_3:9182002-9182021 | None:intergenic | 35.0% | |
| ! | ATTTGTTTGTGGTCTAGCTT+TGG | + | chr5_3:9182045-9182064 | Msa0797080:five_prime_UTR | 35.0% |
| AACAGAAAAGGGAAGAAGAA+TGG | + | chr5_3:9182110-9182129 | Msa0797080:exon | 35.0% | |
| ATCTTCGAGAATCCTTGATA+TGG | - | chr5_3:9182256-9182275 | None:intergenic | 35.0% | |
| ! | AATATCTTGCCATTTGGGAT+TGG | - | chr5_3:9182304-9182323 | None:intergenic | 35.0% |
| !!! | TTTTCGGCATTGACATTCTT+GGG | - | chr5_3:9182411-9182430 | None:intergenic | 35.0% |
| !!! | ATTTTCGGCATTGACATTCT+TGG | - | chr5_3:9182412-9182431 | None:intergenic | 35.0% |
| AAGCAATTGATCTCTCTTCA+AGG | - | chr5_3:9182576-9182595 | None:intergenic | 35.0% | |
| AAGAGAGATCAATTGCTTCA+GGG | + | chr5_3:9182578-9182597 | Msa0797080:CDS | 35.0% | |
| TGTCAATTTGAGTGGCAATT+GGG | - | chr5_3:9182616-9182635 | None:intergenic | 35.0% | |
| TTGTCAATTTGAGTGGCAAT+TGG | - | chr5_3:9182617-9182636 | None:intergenic | 35.0% | |
| CTTCAACTTGTCAATTTGAG+TGG | - | chr5_3:9182624-9182643 | None:intergenic | 35.0% | |
| ! | CACTCAAATTGACAAGTTGA+AGG | + | chr5_3:9182622-9182641 | Msa0797080:CDS | 35.0% |
| AAGGGAATGAAGAATGAAGA+GGG | - | chr5_3:9182693-9182712 | None:intergenic | 35.0% | |
| AAAGGGAATGAAGAATGAAG+AGG | - | chr5_3:9182694-9182713 | None:intergenic | 35.0% | |
| ATCAATTCTAGCCTGCAAAA+GGG | - | chr5_3:9182711-9182730 | None:intergenic | 35.0% | |
| TATCAATTCTAGCCTGCAAA+AGG | - | chr5_3:9182712-9182731 | None:intergenic | 35.0% | |
| !! | TGAAGGTGCTGAAAAAGTAT+TGG | + | chr5_3:9182748-9182767 | Msa0797080:CDS | 35.0% |
| ! | TTTAGAACAAGAGTGACGAT+TGG | - | chr5_3:9182967-9182986 | None:intergenic | 35.0% |
| ! | TAGACTTGGTTTAGCTCATA+AGG | + | chr5_3:9183057-9183076 | Msa0797080:intron | 35.0% |
| ! | GGATATAATGGAACTTATGC+AGG | + | chr5_3:9183202-9183221 | Msa0797080:intron | 35.0% |
| CTCTCCATCTCCAAAATATT+TGG | + | chr5_3:9183356-9183375 | Msa0797080:intron | 35.0% | |
| ! | CATACTGTTTGATGACAATG+GGG | - | chr5_3:9183449-9183468 | None:intergenic | 35.0% |
| ! | CCATACTGTTTGATGACAAT+GGG | - | chr5_3:9183450-9183469 | None:intergenic | 35.0% |
| CCATTGTCATCAAACAGTAT+GGG | + | chr5_3:9183448-9183467 | Msa0797080:CDS | 35.0% | |
| AAACCCATCTGATCCTTATT+AGG | + | chr5_3:9183716-9183735 | Msa0797080:intron | 35.0% | |
| CAACCTAATAAGGATCAGAT+GGG | - | chr5_3:9183722-9183741 | None:intergenic | 35.0% | |
| TCAACCTAATAAGGATCAGA+TGG | - | chr5_3:9183723-9183742 | None:intergenic | 35.0% | |
| ! | CCTTCAAGTTCAACCTAATA+AGG | - | chr5_3:9183732-9183751 | None:intergenic | 35.0% |
| !! | CCTTATTAGGTTGAACTTGA+AGG | + | chr5_3:9183729-9183748 | Msa0797080:intron | 35.0% |
| AACCACTAGACTGTAACAAT+GGG | + | chr5_3:9183924-9183943 | Msa0797080:intron | 35.0% | |
| GTTTAAAAGTTCGGCAATGA+GGG | - | chr5_3:9184026-9184045 | None:intergenic | 35.0% | |
| !! | CTAGTCTTTTAGGTCATTTC+AGG | - | chr5_3:9184504-9184523 | None:intergenic | 35.0% |
| TGAAAACTACCTCTGATACA+TGG | - | chr5_3:9184940-9184959 | None:intergenic | 35.0% | |
| !! | GAACACACATGTTTTTATGG+TGG | - | chr5_3:9185221-9185240 | None:intergenic | 35.0% |
| TCTGATTTCCTTGATTGAGT+TGG | - | chr5_3:9185441-9185460 | None:intergenic | 35.0% | |
| TATCATACCATCTGGGTATT+TGG | - | chr5_3:9185529-9185548 | None:intergenic | 35.0% | |
| AAATACCCAGATGGTATGAT+AGG | + | chr5_3:9185528-9185547 | Msa0797080:intron | 35.0% | |
| AAGAGACTGTGAAGTTATTC+CGG | - | chr5_3:9185770-9185789 | None:intergenic | 35.0% | |
| TCTCTACAAGGACTAAATCA+CGG | - | chr5_3:9185919-9185938 | None:intergenic | 35.0% | |
| GATTTAGTCCTTGTAGAGAT+TGG | + | chr5_3:9185920-9185939 | Msa0797080:intron | 35.0% | |
| AATAGTGACCAATCTCTACA+AGG | - | chr5_3:9185931-9185950 | None:intergenic | 35.0% | |
| AGCTAACCTTTGATCATATG+TGG | + | chr5_3:9186074-9186093 | Msa0797080:intron | 35.0% | |
| TTACATTGCAGTGTTCAACA+TGG | + | chr5_3:9186267-9186286 | Msa0797080:intron | 35.0% | |
| TACATTGCAGTGTTCAACAT+GGG | + | chr5_3:9186268-9186287 | Msa0797080:intron | 35.0% | |
| AATGCTCAGAATCTACAATC+CGG | + | chr5_3:9186388-9186407 | Msa0797080:CDS | 35.0% | |
| TGTCTCTGTTGAGTGAAATT+GGG | - | chr5_3:9186448-9186467 | None:intergenic | 35.0% | |
| TTGTCTCTGTTGAGTGAAAT+TGG | - | chr5_3:9186449-9186468 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGGTTTCTGTAATG+AGG | + | chr5_3:9186614-9186633 | Msa0797080:three_prime_UTR | 35.0% |
| CTCCCATTGTCAATCTTTGA+AGG | + | chr5_3:9181427-9181446 | Msa0797080:five_prime_UTR | 40.0% | |
| !! | GCTTGAATGAAAGTTCTGAG+AGG | - | chr5_3:9181458-9181477 | None:intergenic | 40.0% |
| TGAAAACTGAAAACGTGGCT+AGG | + | chr5_3:9181969-9181988 | Msa0797080:intron | 40.0% | |
| AGAACAAGAGTTGTTGCGTT+GGG | + | chr5_3:9182072-9182091 | Msa0797080:five_prime_UTR | 40.0% | |
| AGAAAAGGGAAGAAGAATGG+AGG | + | chr5_3:9182113-9182132 | Msa0797080:exon | 40.0% | |
| GAAAAGGGAAGAAGAATGGA+GGG | + | chr5_3:9182114-9182133 | Msa0797080:exon | 40.0% | |
| CACGTGTCTTTACTTGTTCT+AGG | - | chr5_3:9182215-9182234 | None:intergenic | 40.0% | |
| !! | TCCTTGATATGGCTTTGAAC+AGG | - | chr5_3:9182245-9182264 | None:intergenic | 40.0% |
| !! | CTCGAAGATTTTGATGCCTA+TGG | + | chr5_3:9182267-9182286 | Msa0797080:CDS | 40.0% |
| ! | CCGAGAATATCTTGCCATTT+GGG | - | chr5_3:9182309-9182328 | None:intergenic | 40.0% |
| CCCAAATGGCAAGATATTCT+CGG | + | chr5_3:9182306-9182325 | Msa0797080:CDS | 40.0% | |
| ACCGAGAATATCTTGCCATT+TGG | - | chr5_3:9182310-9182329 | None:intergenic | 40.0% | |
| TATTCTCGGTCAGTATTCCA+TGG | + | chr5_3:9182320-9182339 | Msa0797080:CDS | 40.0% | |
| CATCGTTGACGATATCAAGA+AGG | + | chr5_3:9182362-9182381 | Msa0797080:CDS | 40.0% | |
| !! | AGTTTTGTGGAGAGCATAAC+AGG | - | chr5_3:9182527-9182546 | None:intergenic | 40.0% |
| !! | CATTTCAGGGAGTAGTTTTG+TGG | - | chr5_3:9182540-9182559 | None:intergenic | 40.0% |
| CACAAAACTACTCCCTGAAA+TGG | + | chr5_3:9182538-9182557 | Msa0797080:CDS | 40.0% | |
| GAAGAGAGATCAATTGCTTC+AGG | + | chr5_3:9182577-9182596 | Msa0797080:CDS | 40.0% | |
| AGAGAGATCAATTGCTTCAG+GGG | + | chr5_3:9182579-9182598 | Msa0797080:CDS | 40.0% | |
| ! | CATTCTTCATTCCCTTTTGC+AGG | + | chr5_3:9182697-9182716 | Msa0797080:intron | 40.0% |
| !!! | TACTTTTTCAGCACCTTCAC+AGG | - | chr5_3:9182747-9182766 | None:intergenic | 40.0% |
| GCAGTAAGCTTTACGAGTAT+CGG | - | chr5_3:9182774-9182793 | None:intergenic | 40.0% | |
| ACTCGTAAAGCTTACTGCTT+TGG | + | chr5_3:9182776-9182795 | Msa0797080:CDS | 40.0% | |
| TGCACTGTTTGCATTAGACT+TGG | + | chr5_3:9183043-9183062 | Msa0797080:intron | 40.0% | |
| AGGACTTCTTGAGTACAAGA+AGG | + | chr5_3:9183077-9183096 | Msa0797080:intron | 40.0% | |
| !! | TGAGTACAAGAAGGTGCTAT+TGG | + | chr5_3:9183086-9183105 | Msa0797080:intron | 40.0% |
| !! | TACAAGAAGGTGCTATTGGT+TGG | + | chr5_3:9183090-9183109 | Msa0797080:intron | 40.0% |
| ATGGAACTTATGCAGGATTG+CGG | + | chr5_3:9183209-9183228 | Msa0797080:intron | 40.0% | |
| TGCTTCACTTCCTATGCATT+TGG | + | chr5_3:9183258-9183277 | Msa0797080:CDS | 40.0% | |
| ! | AGTGCACAATCTTTTCCTGA+TGG | + | chr5_3:9183304-9183323 | Msa0797080:CDS | 40.0% |
| ! | GTGCACAATCTTTTCCTGAT+GGG | + | chr5_3:9183305-9183324 | Msa0797080:CDS | 40.0% |
| TTACTATTGCTAGACCCATC+AGG | - | chr5_3:9183322-9183341 | None:intergenic | 40.0% | |
| CCCATTGTCATCAAACAGTA+TGG | + | chr5_3:9183447-9183466 | Msa0797080:CDS | 40.0% | |
| ! | CCCATACTGTTTGATGACAA+TGG | - | chr5_3:9183451-9183470 | None:intergenic | 40.0% |
| TTGTCATCAAACAGTATGGG+CGG | + | chr5_3:9183451-9183470 | Msa0797080:CDS | 40.0% | |
| AGACCTGTAACAACGAATTC+TGG | - | chr5_3:9183477-9183496 | None:intergenic | 40.0% | |
| AGAATTCGTTGTTACAGGTC+TGG | + | chr5_3:9183476-9183495 | Msa0797080:intron | 40.0% | |
| GGTCATTCACATTTCGATGA+AGG | + | chr5_3:9183497-9183516 | Msa0797080:intron | 40.0% | |
| TCAAAATCGCAAAACCGGAT+AGG | - | chr5_3:9183653-9183672 | None:intergenic | 40.0% | |
| CATTGTTACAGTCTAGTGGT+TGG | - | chr5_3:9183925-9183944 | None:intergenic | 40.0% | |
| CAACCACTAGACTGTAACAA+TGG | + | chr5_3:9183923-9183942 | Msa0797080:intron | 40.0% | |
| ACCACTAGACTGTAACAATG+GGG | + | chr5_3:9183925-9183944 | Msa0797080:intron | 40.0% | |
| GGTTTAAAAGTTCGGCAATG+AGG | - | chr5_3:9184027-9184046 | None:intergenic | 40.0% | |
| ! | ACATCGGGATCACAACTTTT+GGG | + | chr5_3:9184152-9184171 | Msa0797080:CDS | 40.0% |
| GGTGAATTGGCATATGGAAT+TGG | - | chr5_3:9184242-9184261 | None:intergenic | 40.0% | |
| TTCCATATGCCAATTCACCT+AGG | + | chr5_3:9184243-9184262 | Msa0797080:CDS | 40.0% | |
| TGTAGTAGACCTAGGTGAAT+TGG | - | chr5_3:9184255-9184274 | None:intergenic | 40.0% | |
| CACAACAACAGCAACAACAA+CGG | + | chr5_3:9184339-9184358 | Msa0797080:CDS | 40.0% | |
| TTCTTGCTCAGCAACAATAC+AGG | + | chr5_3:9184405-9184424 | Msa0797080:CDS | 40.0% | |
| CTTGAAGTGAACCATTGTGA+TGG | + | chr5_3:9184617-9184636 | Msa0797080:intron | 40.0% | |
| CAATCTTCTCTCCATCACAA+TGG | - | chr5_3:9184631-9184650 | None:intergenic | 40.0% | |
| ! | CTCTATTTCTTGGTTAACCG+AGG | - | chr5_3:9185026-9185045 | None:intergenic | 40.0% |
| ACGACATATAAGTGCGCATA+AGG | - | chr5_3:9185111-9185130 | None:intergenic | 40.0% | |
| ! | ATGCAGTTTTCTCCACAACT+TGG | + | chr5_3:9185352-9185371 | Msa0797080:CDS | 40.0% |
| ! | TGCAGTTTTCTCCACAACTT+GGG | + | chr5_3:9185353-9185372 | Msa0797080:CDS | 40.0% |
| ! | ACTCGTCTAAACCAGTTTTC+TGG | + | chr5_3:9185463-9185482 | Msa0797080:CDS | 40.0% |
| AACAACACCAAATACCCAGA+TGG | + | chr5_3:9185519-9185538 | Msa0797080:CDS | 40.0% | |
| ACATGCCTATCATACCATCT+GGG | - | chr5_3:9185536-9185555 | None:intergenic | 40.0% | |
| CAGATTCCAAACATTTCAGC+CGG | + | chr5_3:9185748-9185767 | Msa0797080:intron | 40.0% | |
| GTTATTCCGGCTGAAATGTT+TGG | - | chr5_3:9185757-9185776 | None:intergenic | 40.0% | |
| TTAGAATAGAAGGCAAGTCG+AGG | + | chr5_3:9185847-9185866 | Msa0797080:intron | 40.0% | |
| CAAACATGCCAAGAACATCA+TGG | - | chr5_3:9185890-9185909 | None:intergenic | 40.0% | |
| TCTACAAGGACTAAATCACG+GGG | - | chr5_3:9185917-9185936 | None:intergenic | 40.0% | |
| CTCTACAAGGACTAAATCAC+GGG | - | chr5_3:9185918-9185937 | None:intergenic | 40.0% | |
| !!! | ATGGATTTTTGTGATGGGCA+CGG | + | chr5_3:9186008-9186027 | Msa0797080:intron | 40.0% |
| TTTCCTCAGTTCGGATTATC+TGG | + | chr5_3:9186125-9186144 | Msa0797080:intron | 40.0% | |
| TGATCACTCAACATATGGGA+AGG | - | chr5_3:9186173-9186192 | None:intergenic | 40.0% | |
| TCCTATTGCTGAATCATCAC+TGG | + | chr5_3:9186240-9186259 | Msa0797080:intron | 40.0% | |
| CCTATTGCTGAATCATCACT+GGG | + | chr5_3:9186241-9186260 | Msa0797080:intron | 40.0% | |
| CTATTGCTGAATCATCACTG+GGG | + | chr5_3:9186242-9186261 | Msa0797080:intron | 40.0% | |
| TATTGCTGAATCATCACTGG+GGG | + | chr5_3:9186243-9186262 | Msa0797080:intron | 40.0% | |
| ! | GCTTAATCCCTCTCCCTTTT+TGG | + | chr5_3:9181492-9181511 | Msa0797080:five_prime_UTR | 45.0% |
| GGTGAATCCAAAAAGGGAGA+GGG | - | chr5_3:9181502-9181521 | None:intergenic | 45.0% | |
| !! | GGGTTCGGTGAATCCAAAAA+GGG | - | chr5_3:9181508-9181527 | None:intergenic | 45.0% |
| !! | TGGGTTCGGTGAATCCAAAA+AGG | - | chr5_3:9181509-9181528 | None:intergenic | 45.0% |
| AAACTGACCTGAAAGAGGAG+AGG | - | chr5_3:9181566-9181585 | None:intergenic | 45.0% | |
| TATCAGTGAGGCAACCCTAA+AGG | - | chr5_3:9181706-9181725 | None:intergenic | 45.0% | |
| TAGGGTTGCCTCACTGATAT+TGG | + | chr5_3:9181707-9181726 | Msa0797080:intron | 45.0% | |
| GAGAACAAGAGTTGTTGCGT+TGG | + | chr5_3:9182071-9182090 | Msa0797080:five_prime_UTR | 45.0% | |
| GAACAAGAGTTGTTGCGTTG+GGG | + | chr5_3:9182073-9182092 | Msa0797080:five_prime_UTR | 45.0% | |
| AACAAGAGTTGTTGCGTTGG+GGG | + | chr5_3:9182074-9182093 | Msa0797080:five_prime_UTR | 45.0% | |
| TTGGGACGGACAAACAGAAA+AGG | + | chr5_3:9182098-9182117 | Msa0797080:five_prime_UTR | 45.0% | |
| TGGGACGGACAAACAGAAAA+GGG | + | chr5_3:9182099-9182118 | Msa0797080:five_prime_UTR | 45.0% | |
| AAGAAGAATGGAGGGTGAGT+TGG | + | chr5_3:9182122-9182141 | Msa0797080:exon | 45.0% | |
| GCCTGTTCAAAGCCATATCA+AGG | + | chr5_3:9182241-9182260 | Msa0797080:CDS | 45.0% | |
| ! | TTGCCATTTGGGATTGGTGT+TGG | - | chr5_3:9182298-9182317 | None:intergenic | 45.0% |
| CAACGATGTTGAAGAGTTCG+AGG | - | chr5_3:9182350-9182369 | None:intergenic | 45.0% | |
| CGATATCAAGAAGGTCTCCA+AGG | + | chr5_3:9182371-9182390 | Msa0797080:CDS | 45.0% | |
| GGGATAGACTATGAAAGCCT+TGG | - | chr5_3:9182391-9182410 | None:intergenic | 45.0% | |
| ACTACTCCCTGAAATGGAGA+CGG | + | chr5_3:9182544-9182563 | Msa0797080:CDS | 45.0% | |
| CAATTTGAGTGGCAATTGGG+AGG | - | chr5_3:9182613-9182632 | None:intergenic | 45.0% | |
| GGTCGATGTGAAATGGAAAG+TGG | - | chr5_3:9182654-9182673 | None:intergenic | 45.0% | |
| TGAAGAGGGAAGACAGAAGA+GGG | - | chr5_3:9182679-9182698 | None:intergenic | 45.0% | |
| ATGAAGAGGGAAGACAGAAG+AGG | - | chr5_3:9182680-9182699 | None:intergenic | 45.0% | |
| !! | TTACTGCTTTGGAACTCGTC+AGG | + | chr5_3:9182787-9182806 | Msa0797080:CDS | 45.0% |
| !! | TACTGCTTTGGAACTCGTCA+GGG | + | chr5_3:9182788-9182807 | Msa0797080:CDS | 45.0% |
| GGCTGCCAAAATTCAAGAAC+AGG | + | chr5_3:9182844-9182863 | Msa0797080:CDS | 45.0% | |
| ATTACCCTCGCCAACATTGA+CGG | - | chr5_3:9182888-9182907 | None:intergenic | 45.0% | |
| TTATAGTACAAGGCGGCAAC+AGG | - | chr5_3:9182918-9182937 | None:intergenic | 45.0% | |
| ! | ACAAGAGTGACGATTGGTTG+TGG | - | chr5_3:9182961-9182980 | None:intergenic | 45.0% |
| GTGAAGCAGTTATATGCCTC+TGG | - | chr5_3:9183246-9183265 | None:intergenic | 45.0% | |
| AATGCGTCTGCCAAATGCAT+AGG | - | chr5_3:9183271-9183290 | None:intergenic | 45.0% | |
| GCATTTGGCAGACGCATTTA+CGG | + | chr5_3:9183273-9183292 | Msa0797080:CDS | 45.0% | |
| GCTTTCTACCTTTGCCTATC+CGG | + | chr5_3:9183636-9183655 | Msa0797080:intron | 45.0% | |
| AGAGGCCACACATACACATA+GGG | + | chr5_3:9183839-9183858 | Msa0797080:intron | 45.0% | |
| GTTGTGAGGAGGTTTCATGT+GGG | - | chr5_3:9183903-9183922 | None:intergenic | 45.0% | |
| TCCCCATTGTTACAGTCTAG+TGG | - | chr5_3:9183929-9183948 | None:intergenic | 45.0% | |
| ! | GACATCGGGATCACAACTTT+TGG | + | chr5_3:9184151-9184170 | Msa0797080:intron | 45.0% |
| ATTGTCAAAAGAAGTGGCGC+TGG | - | chr5_3:9184207-9184226 | None:intergenic | 45.0% | |
| GACCTAGGTGAATTGGCATA+TGG | - | chr5_3:9184248-9184267 | None:intergenic | 45.0% | |
| ! | TGTTGTGCTGTTAGCTGTTG+CGG | - | chr5_3:9184326-9184345 | None:intergenic | 45.0% |
| GCACTCTAACCATGTATCAG+AGG | + | chr5_3:9184928-9184947 | Msa0797080:intron | 45.0% | |
| TATACTCTTGAAAGCCCGAC+TGG | + | chr5_3:9184992-9185011 | Msa0797080:intron | 45.0% | |
| ! | ATGTCGTGCGTTGTTTCAGA+AGG | + | chr5_3:9185124-9185143 | Msa0797080:intron | 45.0% |
| TTCTTTCCTCCACAGTTGCA+CGG | + | chr5_3:9185319-9185338 | Msa0797080:intron | 45.0% | |
| GTTGTGGAGAAAACTGCATC+TGG | - | chr5_3:9185351-9185370 | None:intergenic | 45.0% | |
| AATTGCTGATGCCCAAGTTG+TGG | - | chr5_3:9185367-9185386 | None:intergenic | 45.0% | |
| ACTTGGGCATCAGCAATTTC+AGG | + | chr5_3:9185369-9185388 | Msa0797080:CDS | 45.0% | |
| CTTGGGCATCAGCAATTTCA+GGG | + | chr5_3:9185370-9185389 | Msa0797080:CDS | 45.0% | |
| GGTCAAAGCCAACTCAATCA+AGG | + | chr5_3:9185430-9185449 | Msa0797080:CDS | 45.0% | |
| TGTTAGCAGGACCAGAAAAC+TGG | - | chr5_3:9185477-9185496 | None:intergenic | 45.0% | |
| CTAAATAACGCGCTGTTAGC+AGG | - | chr5_3:9185490-9185509 | None:intergenic | 45.0% | |
| GACATGCCTATCATACCATC+TGG | - | chr5_3:9185537-9185556 | None:intergenic | 45.0% | |
| TGAGAACTAACCTGCATTCG+TGG | - | chr5_3:9185796-9185815 | None:intergenic | 45.0% | |
| ATAGAAGGCAAGTCGAGGTA+TGG | + | chr5_3:9185852-9185871 | Msa0797080:intron | 45.0% | |
| TTGCCAGATAATCCGAACTG+AGG | - | chr5_3:9186131-9186150 | None:intergenic | 45.0% | |
| CCCAGTGATGATTCAGCAAT+AGG | - | chr5_3:9186244-9186263 | None:intergenic | 45.0% | |
| ATTGCAGTGTTCAACATGGG+AGG | + | chr5_3:9186271-9186290 | Msa0797080:intron | 45.0% | |
| GTATGGACATCATACCACCA+GGG | - | chr5_3:9186303-9186322 | None:intergenic | 45.0% | |
| TGTATGGACATCATACCACC+AGG | - | chr5_3:9186304-9186323 | None:intergenic | 45.0% | |
| CAGCAACAGCAACAACAACA+CGG | + | chr5_3:9186334-9186353 | Msa0797080:CDS | 45.0% | |
| CAACAACAACACGGTTCACA+AGG | + | chr5_3:9186343-9186362 | Msa0797080:CDS | 45.0% | |
| !! | GTTCTGAAGCGTCATCATAC+CGG | - | chr5_3:9186410-9186429 | None:intergenic | 45.0% |
| CGGTGAATCCAAAAAGGGAG+AGG | - | chr5_3:9181503-9181522 | None:intergenic | 50.0% | |
| AGTTGTTGCGTTGGGGGATT+GGG | + | chr5_3:9182080-9182099 | Msa0797080:five_prime_UTR | 50.0% | |
| TTCAATCTCTCCTGCTGCTG+TGG | - | chr5_3:9182168-9182187 | None:intergenic | 50.0% | |
| !! | ATTGGTGTTGGTGCGACCAT+AGG | - | chr5_3:9182286-9182305 | None:intergenic | 50.0% |
| GCACCAACACCAATCCCAAA+TGG | + | chr5_3:9182292-9182311 | Msa0797080:CDS | 50.0% | |
| GAAGAGTTCGAGGTTGACCA+TGG | - | chr5_3:9182340-9182359 | None:intergenic | 50.0% | |
| TGTCCTCCGTCTCCATTTCA+GGG | - | chr5_3:9182553-9182572 | None:intergenic | 50.0% | |
| GAGGGAAGGTCGATGTGAAA+TGG | - | chr5_3:9182661-9182680 | None:intergenic | 50.0% | |
| ATGATTGCTGCAGCCTGTGA+AGG | + | chr5_3:9182731-9182750 | Msa0797080:CDS | 50.0% | |
| TATGCAGGATTGCGGATACC+TGG | + | chr5_3:9183217-9183236 | Msa0797080:intron | 50.0% | |
| GTTATATGCCTCTGGTCTCC+AGG | - | chr5_3:9183238-9183257 | None:intergenic | 50.0% | |
| CGGCCAGAATTCGTTGTTAC+AGG | + | chr5_3:9183471-9183490 | Msa0797080:CDS | 50.0% | |
| TCGCAAAACCGGATAGGCAA+AGG | - | chr5_3:9183647-9183666 | None:intergenic | 50.0% | |
| CTACTTTAAGCGACGCTGCA+TGG | + | chr5_3:9183778-9183797 | Msa0797080:intron | 50.0% | |
| GAGAGGCCACACATACACAT+AGG | + | chr5_3:9183838-9183857 | Msa0797080:intron | 50.0% | |
| GCCACACATACACATAGGGA+GGG | + | chr5_3:9183843-9183862 | Msa0797080:intron | 50.0% | |
| CCACACATACACATAGGGAG+GGG | + | chr5_3:9183844-9183863 | Msa0797080:intron | 50.0% | |
| CACACATACACATAGGGAGG+GGG | + | chr5_3:9183845-9183864 | Msa0797080:intron | 50.0% | |
| ATACACATAGGGAGGGGGAA+GGG | + | chr5_3:9183850-9183869 | Msa0797080:intron | 50.0% | |
| GAAAACCTGGGATCAAACCC+AGG | + | chr5_3:9183875-9183894 | Msa0797080:intron | 50.0% | |
| GGTTGTGAGGAGGTTTCATG+TGG | - | chr5_3:9183904-9183923 | None:intergenic | 50.0% | |
| ! | TCTAGTGGTTGGTTGTGAGG+AGG | - | chr5_3:9183914-9183933 | None:intergenic | 50.0% |
| ! | CAGTCTAGTGGTTGGTTGTG+AGG | - | chr5_3:9183917-9183936 | None:intergenic | 50.0% |
| ! | CAATGAGGGAAGTGCACGAA+AGG | - | chr5_3:9184012-9184031 | None:intergenic | 50.0% |
| AGAAGTTGTTGCTGCTGCTG+TGG | - | chr5_3:9184389-9184408 | None:intergenic | 50.0% | |
| AGGCAATCTGCGATGCAACA+AGG | + | chr5_3:9184425-9184444 | Msa0797080:CDS | 50.0% | |
| ATCTGCGATGCAACAAGGAC+TGG | + | chr5_3:9184430-9184449 | Msa0797080:CDS | 50.0% | |
| TCTGCGATGCAACAAGGACT+GGG | + | chr5_3:9184431-9184450 | Msa0797080:CDS | 50.0% | |
| TCTTTCCTCCACAGTTGCAC+GGG | + | chr5_3:9185320-9185339 | Msa0797080:intron | 50.0% | |
| TCAGGGCAGACAGCTTTCTT+CGG | + | chr5_3:9185387-9185406 | Msa0797080:CDS | 50.0% | |
| AACAGGGTGGCAACTCTACT+AGG | - | chr5_3:9185607-9185626 | None:intergenic | 50.0% | |
| ! | TTGCTGTTGCTGCTGCTGTA+TGG | - | chr5_3:9186320-9186339 | None:intergenic | 50.0% |
| CACGGTTCACAAGGTGCATT+TGG | + | chr5_3:9186352-9186371 | Msa0797080:CDS | 50.0% | |
| GGTTCACAAGGTGCATTTGG+TGG | + | chr5_3:9186355-9186374 | Msa0797080:CDS | 50.0% | |
| ! | ACAAGGTGCATTTGGTGGCA+TGG | + | chr5_3:9186360-9186379 | Msa0797080:CDS | 50.0% |
| ! | GACGGTTGTGTTGCTGGGTT+CGG | - | chr5_3:9181523-9181542 | None:intergenic | 55.0% |
| ! | AGAGCGACGGTTGTGTTGCT+GGG | - | chr5_3:9181528-9181547 | None:intergenic | 55.0% |
| GAAAGAGGAGAGGAGAGGAG+AGG | - | chr5_3:9181556-9181575 | None:intergenic | 55.0% | |
| CTCCTCTCCTCTCCTCTTTC+AGG | + | chr5_3:9181556-9181575 | Msa0797080:five_prime_UTR | 55.0% | |
| GACCTGAAAGAGGAGAGGAG+AGG | - | chr5_3:9181561-9181580 | None:intergenic | 55.0% | |
| GAGTTGTTGCGTTGGGGGAT+TGG | + | chr5_3:9182079-9182098 | Msa0797080:five_prime_UTR | 55.0% | |
| GCAGCAGGAGAGATTGAACC+AGG | + | chr5_3:9182170-9182189 | Msa0797080:CDS | 55.0% | |
| ACTCCCTGAAATGGAGACGG+AGG | + | chr5_3:9182547-9182566 | Msa0797080:CDS | 55.0% | |
| GTGTCCTCCGTCTCCATTTC+AGG | - | chr5_3:9182554-9182573 | None:intergenic | 55.0% | |
| GAGGGAAGACAGAAGAGGGA+AGG | - | chr5_3:9182675-9182694 | None:intergenic | 55.0% | |
| ATTGCCCCCACTCTCGACAA+GGG | + | chr5_3:9182818-9182837 | Msa0797080:CDS | 55.0% | |
| GGCCACACATACACATAGGG+AGG | + | chr5_3:9183842-9183861 | Msa0797080:intron | 55.0% | |
| CCCCTCCCTATGTGTATGTG+TGG | - | chr5_3:9183847-9183866 | None:intergenic | 55.0% | |
| CATACACATAGGGAGGGGGA+AGG | + | chr5_3:9183849-9183868 | Msa0797080:intron | 55.0% | |
| GAGGTTTCATGTGGGTGCCT+GGG | - | chr5_3:9183895-9183914 | None:intergenic | 55.0% | |
| !! | TTGTGGGGTTTGCTGCTGAG+GGG | - | chr5_3:9184297-9184316 | None:intergenic | 55.0% |
| !! | GTTGTGGGGTTTGCTGCTGA+GGG | - | chr5_3:9184298-9184317 | None:intergenic | 55.0% |
| AGTTGTTGCTGCTGCTGTGG+AGG | - | chr5_3:9184386-9184405 | None:intergenic | 55.0% | |
| CTGCGATGCAACAAGGACTG+GGG | + | chr5_3:9184432-9184451 | Msa0797080:CDS | 55.0% | |
| CTTGGTTAACCGAGGCCAAC+CGG | - | chr5_3:9185018-9185037 | None:intergenic | 55.0% | |
| TCTTCGGCGCATATGCAGCA+TGG | + | chr5_3:9185403-9185422 | Msa0797080:CDS | 55.0% | |
| GCGCATATGCAGCATGGCAT+TGG | + | chr5_3:9185409-9185428 | Msa0797080:CDS | 55.0% | |
| GTCTCTTCTGCCACGAATGC+AGG | + | chr5_3:9185783-9185802 | Msa0797080:CDS | 55.0% | |
| TGGGAAGGATGACTTCGCTG+AGG | - | chr5_3:9186158-9186177 | None:intergenic | 55.0% | |
| GCAGTGTTCAACATGGGAGG+TGG | + | chr5_3:9186274-9186293 | Msa0797080:intron | 55.0% | |
| GAGAGCGACGGTTGTGTTGC+TGG | - | chr5_3:9181529-9181548 | None:intergenic | 60.0% | |
| AGGAGAGGAGAGGAGAGCGA+CGG | - | chr5_3:9181541-9181560 | None:intergenic | 60.0% | |
| AGGAGAGGAGAGGAGAGGAG+AGG | - | chr5_3:9181546-9181565 | None:intergenic | 60.0% | |
| GTTGCGTTGGGGGATTGGGA+CGG | + | chr5_3:9182084-9182103 | Msa0797080:five_prime_UTR | 60.0% | |
| TTAGCTGCTGCTGCACAGCC+TGG | - | chr5_3:9182191-9182210 | None:intergenic | 60.0% | |
| CTTGTCGAGAGTGGGGGCAA+TGG | - | chr5_3:9182819-9182838 | None:intergenic | 60.0% | |
| CATTGCCCCCACTCTCGACA+AGG | + | chr5_3:9182817-9182836 | Msa0797080:CDS | 60.0% | |
| CTGACCCTTGTCGAGAGTGG+GGG | - | chr5_3:9182825-9182844 | None:intergenic | 60.0% | |
| CCTGACCCTTGTCGAGAGTG+GGG | - | chr5_3:9182826-9182845 | None:intergenic | 60.0% | |
| GCCTGACCCTTGTCGAGAGT+GGG | - | chr5_3:9182827-9182846 | None:intergenic | 60.0% | |
| AGCCTGACCCTTGTCGAGAG+TGG | - | chr5_3:9182828-9182847 | None:intergenic | 60.0% | |
| CTCCGAGCTGCCGTCAATGT+TGG | + | chr5_3:9182875-9182894 | Msa0797080:CDS | 60.0% | |
| CGCCAACATTGACGGCAGCT+CGG | - | chr5_3:9182880-9182899 | None:intergenic | 60.0% | |
| AGCTGCCGTCAATGTTGGCG+AGG | + | chr5_3:9182880-9182899 | Msa0797080:CDS | 60.0% | |
| GCTGCCGTCAATGTTGGCGA+GGG | + | chr5_3:9182881-9182900 | Msa0797080:CDS | 60.0% | |
| TGCGGATACCTGGAGACCAG+AGG | + | chr5_3:9183227-9183246 | Msa0797080:CDS | 60.0% | |
| AGGGGGAAGGGTGGAAAACC+TGG | + | chr5_3:9183862-9183881 | Msa0797080:intron | 60.0% | |
| GGGGGAAGGGTGGAAAACCT+GGG | + | chr5_3:9183863-9183882 | Msa0797080:intron | 60.0% | |
| GGAGGTTTCATGTGGGTGCC+TGG | - | chr5_3:9183896-9183915 | None:intergenic | 60.0% | |
| !! | GGTTGTGGGGTTTGCTGCTG+AGG | - | chr5_3:9184299-9184318 | None:intergenic | 60.0% |
| GCTGTTAGCTGTTGCGGCTG+CGG | - | chr5_3:9184320-9184339 | None:intergenic | 60.0% | |
| GATGCAACAAGGACTGGGGC+AGG | + | chr5_3:9184436-9184455 | Msa0797080:CDS | 60.0% | |
| CTCTTGAAAGCCCGACTGGC+CGG | + | chr5_3:9184996-9185015 | Msa0797080:intron | 60.0% | |
| TGTTGCCCGTGCAACTGTGG+AGG | - | chr5_3:9185328-9185347 | None:intergenic | 60.0% | |
| !! | TGGTGTTGCCCGTGCAACTG+TGG | - | chr5_3:9185331-9185350 | None:intergenic | 60.0% |
| AACATGGGAGGTGGCAACCC+TGG | + | chr5_3:9186283-9186302 | Msa0797080:CDS | 60.0% | |
| TGCTGCTGTGGCTGCGGTTG+TGG | - | chr5_3:9182156-9182175 | None:intergenic | 65.0% | |
| ACAACCGCAGCCACAGCAGC+AGG | + | chr5_3:9182155-9182174 | Msa0797080:CDS | 65.0% | |
| CTCTCCTGCTGCTGTGGCTG+CGG | - | chr5_3:9182162-9182181 | None:intergenic | 65.0% | |
| TCGAGAGTGGGGGCAATGGC+AGG | - | chr5_3:9182815-9182834 | None:intergenic | 65.0% | |
| CCCCACTCTCGACAAGGGTC+AGG | + | chr5_3:9182823-9182842 | Msa0797080:CDS | 65.0% | |
| CACATAGGGAGGGGGAAGGG+TGG | + | chr5_3:9183853-9183872 | Msa0797080:intron | 65.0% | |
| GGGTGCCTGGGTTTGATCCC+AGG | - | chr5_3:9183883-9183902 | None:intergenic | 65.0% | |
| !! | GTGGCGCTGGTTGCAGCAGA+AGG | - | chr5_3:9184194-9184213 | None:intergenic | 65.0% |
| !! | GGGGTTTGCTGCTGAGGGGA+TGG | - | chr5_3:9184293-9184312 | None:intergenic | 65.0% |
| CTGTTGCGGCTGCGGTTGTG+GGG | - | chr5_3:9184312-9184331 | None:intergenic | 65.0% | |
| GCTGTTGCGGCTGCGGTTGT+GGG | - | chr5_3:9184313-9184332 | None:intergenic | 65.0% | |
| AGCTGTTGCGGCTGCGGTTG+TGG | - | chr5_3:9184314-9184333 | None:intergenic | 65.0% | |
| ! | TGAAAGCCCGACTGGCCGGT+TGG | + | chr5_3:9185000-9185019 | Msa0797080:intron | 65.0% |
| ATGGGAGGTGGCAACCCTGG+TGG | + | chr5_3:9186286-9186305 | Msa0797080:CDS | 65.0% | |
| ACCGAGGCCAACCGGCCAGT+CGG | - | chr5_3:9185010-9185029 | None:intergenic | 70.0% | |
| CCGAGGCCAACCGGCCAGTC+GGG | - | chr5_3:9185009-9185028 | None:intergenic | 75.0% | |
| !! | CCCGACTGGCCGGTTGGCCT+CGG | + | chr5_3:9185006-9185025 | Msa0797080:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 9181420 | 9186728 | 9181420 | ID=Msa0797080;Name=Msa0797080 |
| chr5_3 | mRNA | 9181420 | 9186728 | 9181420 | ID=Msa0797080-mRNA-1;Parent=Msa0797080;Name=Msa0797080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=250|1|1|1|0.9|0.90|11|245|543 |
| chr5_3 | exon | 9181420 | 9181577 | 9181420 | ID=Msa0797080-mRNA-1:exon:3888;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9182037 | 9182438 | 9182037 | ID=Msa0797080-mRNA-1:exon:3889;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9182519 | 9182643 | 9182519 | ID=Msa0797080-mRNA-1:exon:3890;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9182719 | 9182902 | 9182719 | ID=Msa0797080-mRNA-1:exon:3891;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9183224 | 9183337 | 9183224 | ID=Msa0797080-mRNA-1:exon:3892;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9183428 | 9183492 | 9183428 | ID=Msa0797080-mRNA-1:exon:3893;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9184152 | 9184457 | 9184152 | ID=Msa0797080-mRNA-1:exon:3894;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9185334 | 9185540 | 9185334 | ID=Msa0797080-mRNA-1:exon:3895;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9185751 | 9185804 | 9185751 | ID=Msa0797080-mRNA-1:exon:3896;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9186134 | 9186194 | 9186134 | ID=Msa0797080-mRNA-1:exon:3897;Parent=Msa0797080-mRNA-1 |
| chr5_3 | exon | 9186278 | 9186728 | 9186278 | ID=Msa0797080-mRNA-1:exon:3898;Parent=Msa0797080-mRNA-1 |
| chr5_3 | five_prime_UTR | 9181420 | 9181577 | 9181420 | ID=Msa0797080-mRNA-1:five_prime_utr;Parent=Msa0797080-mRNA-1 |
| chr5_3 | five_prime_UTR | 9182037 | 9182128 | 9182037 | ID=Msa0797080-mRNA-1:five_prime_utr;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9182129 | 9182438 | 9182129 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9182519 | 9182643 | 9182519 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9182719 | 9182902 | 9182719 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9183224 | 9183337 | 9183224 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9183428 | 9183492 | 9183428 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9184152 | 9184457 | 9184152 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9185334 | 9185540 | 9185334 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9185751 | 9185804 | 9185751 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9186134 | 9186194 | 9186134 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | CDS | 9186278 | 9186483 | 9186278 | ID=Msa0797080-mRNA-1:cds;Parent=Msa0797080-mRNA-1 |
| chr5_3 | three_prime_UTR | 9186484 | 9186728 | 9186484 | ID=Msa0797080-mRNA-1:three_prime_utr;Parent=Msa0797080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
