Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459760 | KAG5147075.1 | 81.693 | 508 | 55 | 3 | 1 | 508 | 1 | 470 | 0.0 | 815 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459760 | sp|Q7Y0Y6|HDAC3_ORYSJ | 59.188 | 517 | 135 | 8 | 3 | 508 | 8 | 459 | 0.0 | 569 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459760 | A0A4D9BD23 | 74.706 | 510 | 107 | 3 | 1 | 508 | 1 | 490 | 0.0 | 775 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa1459760 | 0.842229 | 2.937364e-58 | -8.615850e-47 |
Msa0000570 | Msa1459760 | 0.807758 | 4.323150e-50 | -8.615850e-47 |
Msa0003560 | Msa1459760 | -0.800607 | 1.331598e-48 | -8.615850e-47 |
Msa0013050 | Msa1459760 | 0.824442 | 8.055039e-54 | -8.615850e-47 |
Msa0015460 | Msa1459760 | -0.831099 | 2.022598e-55 | -8.615850e-47 |
Msa0015480 | Msa1459760 | -0.823796 | 1.141902e-53 | -8.615850e-47 |
Msa0023470 | Msa1459760 | -0.810599 | 1.063891e-50 | -8.615850e-47 |
Msa0023830 | Msa1459760 | 0.814786 | 1.290518e-51 | -8.615850e-47 |
Msa0032610 | Msa1459760 | -0.830374 | 3.045006e-55 | -8.615850e-47 |
Msa0038020 | Msa1459760 | -0.811092 | 8.323882e-51 | -8.615850e-47 |
Msa0039770 | Msa1459760 | 0.812481 | 4.149367e-51 | -8.615850e-47 |
Msa0042980 | Msa1459760 | 0.808608 | 2.848958e-50 | -8.615850e-47 |
Msa0052860 | Msa1459760 | -0.801992 | 6.929977e-49 | -8.615850e-47 |
Msa0058270 | Msa1459760 | -0.800506 | 1.396086e-48 | -8.615850e-47 |
Msa0063350 | Msa1459760 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
Msa0069310 | Msa1459760 | -0.815567 | 8.651323e-52 | -8.615850e-47 |
Msa0085720 | Msa1459760 | -0.821771 | 3.382379e-53 | -8.615850e-47 |
Msa0090030 | Msa1459760 | -0.808871 | 2.502786e-50 | -8.615850e-47 |
Msa0090390 | Msa1459760 | -0.815193 | 1.047932e-51 | -8.615850e-47 |
Msa0096940 | Msa1459760 | 0.811279 | 7.579313e-51 | -8.615850e-47 |
Msa0099510 | Msa1459760 | -0.829708 | 4.425116e-55 | -8.615850e-47 |
Msa0109590 | Msa1459760 | -0.855584 | 5.721531e-62 | -8.615850e-47 |
Msa0120340 | Msa1459760 | -0.805343 | 1.397420e-49 | -8.615850e-47 |
Msa0120370 | Msa1459760 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
Msa1350690 | Msa1459760 | -0.850673 | 1.458889e-60 | -8.615850e-47 |
Msa1360280 | Msa1459760 | -0.809237 | 2.089439e-50 | -8.615850e-47 |
Msa1363700 | Msa1459760 | -0.810021 | 1.417811e-50 | -8.615850e-47 |
Msa1371090 | Msa1459760 | -0.854365 | 1.291981e-61 | -8.615850e-47 |
Msa1375700 | Msa1459760 | 0.923873 | 1.494880e-89 | -8.615850e-47 |
Msa1381540 | Msa1459760 | -0.808265 | 3.371144e-50 | -8.615850e-47 |
Msa1388860 | Msa1459760 | -0.807031 | 6.164594e-50 | -8.615850e-47 |
Msa1389780 | Msa1459760 | -0.818643 | 1.761484e-52 | -8.615850e-47 |
Msa1403340 | Msa1459760 | -0.808365 | 3.210435e-50 | -8.615850e-47 |
Msa1403930 | Msa1459760 | 0.811064 | 8.439776e-51 | -8.615850e-47 |
Msa1404240 | Msa1459760 | 0.823185 | 1.587150e-53 | -8.615850e-47 |
Msa1417810 | Msa1459760 | 0.866001 | 3.921191e-65 | -8.615850e-47 |
Msa1417830 | Msa1459760 | 0.844433 | 7.582783e-59 | -8.615850e-47 |
Msa1434770 | Msa1459760 | 0.803234 | 3.842574e-49 | -8.615850e-47 |
Msa1438700 | Msa1459760 | -0.820545 | 6.480889e-53 | -8.615850e-47 |
Msa1442220 | Msa1459760 | 0.800231 | 1.587895e-48 | -8.615850e-47 |
Msa1443610 | Msa1459760 | -0.824107 | 9.655293e-54 | -8.615850e-47 |
Msa1444250 | Msa1459760 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
Msa1444740 | Msa1459760 | -0.818967 | 1.486741e-52 | -8.615850e-47 |
Msa1445400 | Msa1459760 | 0.868222 | 7.666369e-66 | -8.615850e-47 |
Msa1445420 | Msa1459760 | 0.846268 | 2.416290e-59 | -8.615850e-47 |
Msa1449350 | Msa1459760 | 0.858907 | 5.967955e-63 | -8.615850e-47 |
Msa1452170 | Msa1459760 | -0.811409 | 7.103477e-51 | -8.615850e-47 |
Msa1459760 | Msa1465960 | -0.812108 | 5.004280e-51 | -8.615850e-47 |
Msa0608710 | Msa1459760 | -0.823589 | 1.276830e-53 | -8.615850e-47 |
Msa0614990 | Msa1459760 | -0.840083 | 1.076173e-57 | -8.615850e-47 |
Msa0615270 | Msa1459760 | 0.817507 | 3.181311e-52 | -8.615850e-47 |
Msa0616540 | Msa1459760 | -0.804164 | 2.463336e-49 | -8.615850e-47 |
Msa0625840 | Msa1459760 | 0.820862 | 5.479792e-53 | -8.615850e-47 |
Msa0626990 | Msa1459760 | -0.804360 | 2.243015e-49 | -8.615850e-47 |
Msa0627350 | Msa1459760 | -0.802527 | 5.378393e-49 | -8.615850e-47 |
Msa0647450 | Msa1459760 | 0.828663 | 7.930456e-55 | -8.615850e-47 |
Msa0650620 | Msa1459760 | -0.805157 | 1.528663e-49 | -8.615850e-47 |
Msa0650730 | Msa1459760 | -0.821306 | 4.331758e-53 | -8.615850e-47 |
Msa0653320 | Msa1459760 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
Msa0654010 | Msa1459760 | -0.818201 | 2.217966e-52 | -8.615850e-47 |
Msa0661190 | Msa1459760 | 0.813250 | 2.814586e-51 | -8.615850e-47 |
Msa0679550 | Msa1459760 | -0.848980 | 4.335356e-60 | -8.615850e-47 |
Msa0683140 | Msa1459760 | -0.801869 | 7.347152e-49 | -8.615850e-47 |
Msa0693790 | Msa1459760 | -0.819980 | 8.735770e-53 | -8.615850e-47 |
Msa0715410 | Msa1459760 | -0.802828 | 4.662006e-49 | -8.615850e-47 |
Msa0724560 | Msa1459760 | -0.803588 | 3.245563e-49 | -8.615850e-47 |
Msa0733740 | Msa1459760 | 0.800848 | 1.188588e-48 | -8.615850e-47 |
Msa0743120 | Msa1459760 | 0.802283 | 6.038319e-49 | -8.615850e-47 |
Msa0755080 | Msa1459760 | -0.808287 | 3.335680e-50 | -8.615850e-47 |
Msa0755230 | Msa1459760 | 0.805440 | 1.333366e-49 | -8.615850e-47 |
Msa0788070 | Msa1459760 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
Msa0791820 | Msa1459760 | -0.851760 | 7.196309e-61 | -8.615850e-47 |
Msa0793380 | Msa1459760 | -0.803473 | 3.428669e-49 | -8.615850e-47 |
Msa0796950 | Msa1459760 | -0.804143 | 2.488078e-49 | -8.615850e-47 |
Msa0797080 | Msa1459760 | 0.803268 | 3.780790e-49 | -8.615850e-47 |
Msa0827470 | Msa1459760 | -0.805059 | 1.602610e-49 | -8.615850e-47 |
Msa0834450 | Msa1459760 | -0.818877 | 1.558170e-52 | -8.615850e-47 |
Msa0836210 | Msa1459760 | 0.824548 | 7.606217e-54 | -8.615850e-47 |
Msa0124550 | Msa1459760 | -0.836111 | 1.133390e-56 | -8.615850e-47 |
Msa0125640 | Msa1459760 | 0.815288 | 9.982358e-52 | -8.615850e-47 |
Msa0130520 | Msa1459760 | -0.820102 | 8.191089e-53 | -8.615850e-47 |
Msa0134110 | Msa1459760 | 0.804906 | 1.724778e-49 | -8.615850e-47 |
Msa0137710 | Msa1459760 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa0140510 | Msa1459760 | 0.863423 | 2.515761e-64 | -8.615850e-47 |
Msa0140520 | Msa1459760 | 0.832992 | 6.886361e-56 | -8.615850e-47 |
Msa0144970 | Msa1459760 | 0.812138 | 4.929166e-51 | -8.615850e-47 |
Msa0148120 | Msa1459760 | -0.852825 | 3.581028e-61 | -8.615850e-47 |
Msa0155880 | Msa1459760 | -0.819020 | 1.446206e-52 | -8.615850e-47 |
Msa0156650 | Msa1459760 | 0.808638 | 2.806918e-50 | -8.615850e-47 |
Msa0162770 | Msa1459760 | 0.828573 | 8.340881e-55 | -8.615850e-47 |
Msa0163620 | Msa1459760 | 0.804017 | 2.643009e-49 | -8.615850e-47 |
Msa0172780 | Msa1459760 | -0.828040 | 1.121036e-54 | -8.615850e-47 |
Msa0178860 | Msa1459760 | 0.850819 | 1.327239e-60 | -8.615850e-47 |
Msa0183010 | Msa1459760 | 0.808600 | 2.859565e-50 | -8.615850e-47 |
Msa0196020 | Msa1459760 | 0.802512 | 5.416210e-49 | -8.615850e-47 |
Msa0212750 | Msa1459760 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
Msa0223100 | Msa1459760 | -0.803610 | 3.211187e-49 | -8.615850e-47 |
Msa0223290 | Msa1459760 | -0.818935 | 1.511447e-52 | -8.615850e-47 |
Msa0223380 | Msa1459760 | -0.820302 | 7.369959e-53 | -8.615850e-47 |
Msa0229490 | Msa1459760 | 0.823136 | 1.629600e-53 | -8.615850e-47 |
Msa0233610 | Msa1459760 | -0.814838 | 1.256146e-51 | -8.615850e-47 |
Msa1225150 | Msa1459760 | 0.809011 | 2.336186e-50 | -8.615850e-47 |
Msa1228160 | Msa1459760 | 0.855107 | 7.875020e-62 | -8.615850e-47 |
Msa1229850 | Msa1459760 | -0.834815 | 2.410042e-56 | -8.615850e-47 |
Msa1233500 | Msa1459760 | -0.800588 | 1.343078e-48 | -8.615850e-47 |
Msa1234690 | Msa1459760 | -0.806715 | 7.189241e-50 | -8.615850e-47 |
Msa1234730 | Msa1459760 | -0.840095 | 1.068909e-57 | -8.615850e-47 |
Msa1235400 | Msa1459760 | -0.800636 | 1.313609e-48 | -8.615850e-47 |
Msa1236070 | Msa1459760 | 0.836242 | 1.049798e-56 | -8.615850e-47 |
Msa1241800 | Msa1459760 | -0.810922 | 9.058776e-51 | -8.615850e-47 |
Msa1257800 | Msa1459760 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
Msa1258380 | Msa1459760 | 0.814964 | 1.177905e-51 | -8.615850e-47 |
Msa1267060 | Msa1459760 | -0.800644 | 1.308181e-48 | -8.615850e-47 |
Msa1270660 | Msa1459760 | -0.802796 | 4.732688e-49 | -8.615850e-47 |
Msa1270960 | Msa1459760 | 0.817113 | 3.902286e-52 | -8.615850e-47 |
Msa1272520 | Msa1459760 | -0.806201 | 9.229725e-50 | -8.615850e-47 |
Msa1276510 | Msa1459760 | -0.805835 | 1.102064e-49 | -8.615850e-47 |
Msa1294610 | Msa1459760 | 0.815888 | 7.340616e-52 | -8.615850e-47 |
Msa1302190 | Msa1459760 | 0.836687 | 8.083990e-57 | -8.615850e-47 |
Msa1307740 | Msa1459760 | -0.846476 | 2.121263e-59 | -8.615850e-47 |
Msa1308080 | Msa1459760 | 0.835648 | 1.484443e-56 | -8.615850e-47 |
Msa1308330 | Msa1459760 | 0.813599 | 2.359045e-51 | -8.615850e-47 |
Msa1314770 | Msa1459760 | -0.835505 | 1.613950e-56 | -8.615850e-47 |
Msa1315110 | Msa1459760 | -0.839558 | 1.474572e-57 | -8.615850e-47 |
Msa1322190 | Msa1459760 | -0.832067 | 1.167493e-55 | -8.615850e-47 |
Msa1332870 | Msa1459760 | 0.818022 | 2.434222e-52 | -8.615850e-47 |
Msa0365490 | Msa1459760 | -0.801631 | 8.218512e-49 | -8.615850e-47 |
Msa0377530 | Msa1459760 | -0.819914 | 9.042346e-53 | -8.615850e-47 |
Msa0381600 | Msa1459760 | 0.802988 | 4.319400e-49 | -8.615850e-47 |
Msa0387910 | Msa1459760 | -0.802406 | 5.695047e-49 | -8.615850e-47 |
Msa0388030 | Msa1459760 | 0.849729 | 2.681943e-60 | -8.615850e-47 |
Msa0388040 | Msa1459760 | 0.837049 | 6.536910e-57 | -8.615850e-47 |
Msa0389810 | Msa1459760 | -0.845012 | 5.296019e-59 | -8.615850e-47 |
Msa0394340 | Msa1459760 | -0.826103 | 3.259520e-54 | -8.615850e-47 |
Msa0404000 | Msa1459760 | -0.821433 | 4.049278e-53 | -8.615850e-47 |
Msa0404030 | Msa1459760 | -0.805060 | 1.601523e-49 | -8.615850e-47 |
Msa0404700 | Msa1459760 | -0.802971 | 4.355780e-49 | -8.615850e-47 |
Msa0419640 | Msa1459760 | 0.831539 | 1.576517e-55 | -8.615850e-47 |
Msa0421170 | Msa1459760 | -0.817530 | 3.144131e-52 | -8.615850e-47 |
Msa0421780 | Msa1459760 | 0.807117 | 5.912582e-50 | -8.615850e-47 |
Msa0426810 | Msa1459760 | -0.815540 | 8.774042e-52 | -8.615850e-47 |
Msa0429290 | Msa1459760 | -0.802206 | 6.262228e-49 | -8.615850e-47 |
Msa0442200 | Msa1459760 | -0.826936 | 2.063839e-54 | -8.615850e-47 |
Msa0457510 | Msa1459760 | -0.822645 | 2.120883e-53 | -8.615850e-47 |
Msa0464900 | Msa1459760 | -0.839672 | 1.377132e-57 | -8.615850e-47 |
Msa0467900 | Msa1459760 | 0.830237 | 3.289232e-55 | -8.615850e-47 |
Msa0467960 | Msa1459760 | 0.817794 | 2.740623e-52 | -8.615850e-47 |
Msa0468130 | Msa1459760 | -0.858304 | 9.033257e-63 | -8.615850e-47 |
Msa0473240 | Msa1459760 | -0.804204 | 2.416363e-49 | -8.615850e-47 |
Msa0475580 | Msa1459760 | -0.804614 | 1.984960e-49 | -8.615850e-47 |
Msa0479090 | Msa1459760 | -0.818338 | 2.064612e-52 | -8.615850e-47 |
Msa0482190 | Msa1459760 | 0.817354 | 3.445164e-52 | -8.615850e-47 |
Msa0982270 | Msa1459760 | -0.845006 | 5.315319e-59 | -8.615850e-47 |
Msa0992490 | Msa1459760 | 0.813294 | 2.752547e-51 | -8.615850e-47 |
Msa1002600 | Msa1459760 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
Msa1012830 | Msa1459760 | -0.800634 | 1.314541e-48 | -8.615850e-47 |
Msa1021340 | Msa1459760 | -0.803309 | 3.707133e-49 | -8.615850e-47 |
Msa1021510 | Msa1459760 | -0.800940 | 1.138291e-48 | -8.615850e-47 |
Msa1029080 | Msa1459760 | 0.856661 | 2.766227e-62 | -8.615850e-47 |
Msa1033410 | Msa1459760 | 0.850204 | 1.975147e-60 | -8.615850e-47 |
Msa1034080 | Msa1459760 | 0.808420 | 3.123842e-50 | -8.615850e-47 |
Msa1039880 | Msa1459760 | -0.821904 | 3.150534e-53 | -8.615850e-47 |
Msa1047720 | Msa1459760 | -0.827022 | 1.967652e-54 | -8.615850e-47 |
Msa1053260 | Msa1459760 | -0.804090 | 2.552475e-49 | -8.615850e-47 |
Msa1060070 | Msa1459760 | -0.802663 | 5.041613e-49 | -8.615850e-47 |
Msa1069660 | Msa1459760 | 0.810774 | 9.751038e-51 | -8.615850e-47 |
Msa1072460 | Msa1459760 | 0.829608 | 4.680172e-55 | -8.615850e-47 |
Msa1073070 | Msa1459760 | 0.841841 | 3.719923e-58 | -8.615850e-47 |
Msa1079370 | Msa1459760 | 0.805930 | 1.052173e-49 | -8.615850e-47 |
Msa1079730 | Msa1459760 | 0.841773 | 3.877804e-58 | -8.615850e-47 |
Msa1087510 | Msa1459760 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
Msa1092090 | Msa1459760 | -0.817870 | 2.634928e-52 | -8.615850e-47 |
Msa1094430 | Msa1459760 | -0.825517 | 4.489873e-54 | -8.615850e-47 |
Msa1103660 | Msa1459760 | 0.838496 | 2.778202e-57 | -8.615850e-47 |
Msa1105500 | Msa1459760 | -0.801366 | 9.314932e-49 | -8.615850e-47 |
Msa0241460 | Msa1459760 | 0.802183 | 6.329852e-49 | -8.615850e-47 |
Msa0256330 | Msa1459760 | -0.813534 | 2.437986e-51 | -8.615850e-47 |
Msa0266210 | Msa1459760 | -0.842984 | 1.851562e-58 | -8.615850e-47 |
Msa0268090 | Msa1459760 | -0.849327 | 3.471388e-60 | -8.615850e-47 |
Msa0279210 | Msa1459760 | 0.869771 | 2.412014e-66 | -8.615850e-47 |
Msa0279250 | Msa1459760 | 0.817311 | 3.522473e-52 | -8.615850e-47 |
Msa0287670 | Msa1459760 | -0.851122 | 1.089780e-60 | -8.615850e-47 |
Msa0288730 | Msa1459760 | -0.808581 | 2.886253e-50 | -8.615850e-47 |
Msa0295000 | Msa1459760 | 0.801406 | 9.139555e-49 | -8.615850e-47 |
Msa0295330 | Msa1459760 | -0.815312 | 9.859624e-52 | -8.615850e-47 |
Msa0296980 | Msa1459760 | 0.801581 | 8.414863e-49 | -8.615850e-47 |
Msa0302650 | Msa1459760 | -0.806009 | 1.012633e-49 | -8.615850e-47 |
Msa0307560 | Msa1459760 | -0.806836 | 6.778585e-50 | -8.615850e-47 |
Msa0312310 | Msa1459760 | -0.811386 | 7.184450e-51 | -8.615850e-47 |
Msa0318970 | Msa1459760 | 0.864641 | 1.050506e-64 | -8.615850e-47 |
Msa0344870 | Msa1459760 | -0.803222 | 3.863389e-49 | -8.615850e-47 |
Msa0347610 | Msa1459760 | -0.848104 | 7.578463e-60 | -8.615850e-47 |
Msa0362060 | Msa1459760 | -0.824997 | 5.958835e-54 | -8.615850e-47 |
Msa0363170 | Msa1459760 | -0.813532 | 2.440065e-51 | -8.615850e-47 |
Msa1113230 | Msa1459760 | 0.812657 | 3.796876e-51 | -8.615850e-47 |
Msa1126120 | Msa1459760 | 0.822985 | 1.767379e-53 | -8.615850e-47 |
Msa1129060 | Msa1459760 | 0.826500 | 2.622413e-54 | -8.615850e-47 |
Msa1130210 | Msa1459760 | 0.817925 | 2.560196e-52 | -8.615850e-47 |
Msa1135880 | Msa1459760 | -0.810613 | 1.056768e-50 | -8.615850e-47 |
Msa1143930 | Msa1459760 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
Msa1156170 | Msa1459760 | 0.850365 | 1.779873e-60 | -8.615850e-47 |
Msa1160770 | Msa1459760 | 0.826597 | 2.486429e-54 | -8.615850e-47 |
Msa1164020 | Msa1459760 | -0.803677 | 3.109837e-49 | -8.615850e-47 |
Msa1168040 | Msa1459760 | 0.848039 | 7.900516e-60 | -8.615850e-47 |
Msa1172130 | Msa1459760 | 0.801489 | 8.788079e-49 | -8.615850e-47 |
Msa1174310 | Msa1459760 | -0.820451 | 6.813674e-53 | -8.615850e-47 |
Msa1174870 | Msa1459760 | -0.817765 | 2.783195e-52 | -8.615850e-47 |
Msa1182640 | Msa1459760 | -0.804435 | 2.162960e-49 | -8.615850e-47 |
Msa1183100 | Msa1459760 | 0.805448 | 1.328511e-49 | -8.615850e-47 |
Msa1188600 | Msa1459760 | 0.808978 | 2.374198e-50 | -8.615850e-47 |
Msa1190890 | Msa1459760 | 0.828820 | 7.269887e-55 | -8.615850e-47 |
Msa1191470 | Msa1459760 | 0.819783 | 9.687745e-53 | -8.615850e-47 |
Msa1207460 | Msa1459760 | 0.847321 | 1.245146e-59 | -8.615850e-47 |
Msa1207470 | Msa1459760 | 0.839749 | 1.315177e-57 | -8.615850e-47 |
Msa1217430 | Msa1459760 | 0.816998 | 4.140672e-52 | -8.615850e-47 |
Msa1219810 | Msa1459760 | -0.831854 | 1.318453e-55 | -8.615850e-47 |
Msa0485500 | Msa1459760 | 0.806767 | 7.011781e-50 | -8.615850e-47 |
Msa0489610 | Msa1459760 | -0.852620 | 4.097494e-61 | -8.615850e-47 |
Msa0491500 | Msa1459760 | -0.837837 | 4.105676e-57 | -8.615850e-47 |
Msa0491520 | Msa1459760 | -0.836554 | 8.744936e-57 | -8.615850e-47 |
Msa0504410 | Msa1459760 | -0.807605 | 4.657696e-50 | -8.615850e-47 |
Msa0505060 | Msa1459760 | -0.807071 | 6.044895e-50 | -8.615850e-47 |
Msa0517490 | Msa1459760 | -0.821484 | 3.940896e-53 | -8.615850e-47 |
Msa0519220 | Msa1459760 | -0.809343 | 1.982693e-50 | -8.615850e-47 |
Msa0530650 | Msa1459760 | -0.804803 | 1.812911e-49 | -8.615850e-47 |
Msa0553220 | Msa1459760 | 0.855062 | 8.117592e-62 | -8.615850e-47 |
Msa0558690 | Msa1459760 | -0.804425 | 2.173165e-49 | -8.615850e-47 |
Msa0561130 | Msa1459760 | 0.839606 | 1.433299e-57 | -8.615850e-47 |
Msa0574060 | Msa1459760 | 0.824111 | 9.636451e-54 | -8.615850e-47 |
Msa0579370 | Msa1459760 | -0.837386 | 5.360663e-57 | -8.615850e-47 |
Msa0581920 | Msa1459760 | -0.807640 | 4.578784e-50 | -8.615850e-47 |
Msa0587190 | Msa1459760 | -0.830894 | 2.270518e-55 | -8.615850e-47 |
Msa0860900 | Msa1459760 | 0.852380 | 4.794341e-61 | -8.615850e-47 |
Msa0864470 | Msa1459760 | 0.851653 | 7.716440e-61 | -8.615850e-47 |
Msa0876360 | Msa1459760 | -0.819050 | 1.423820e-52 | -8.615850e-47 |
Msa0876860 | Msa1459760 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
Msa0891600 | Msa1459760 | 0.800644 | 1.308181e-48 | -8.615850e-47 |
Msa0905380 | Msa1459760 | -0.809471 | 1.861920e-50 | -8.615850e-47 |
Msa0908170 | Msa1459760 | -0.806267 | 8.939246e-50 | -8.615850e-47 |
Msa0929960 | Msa1459760 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
Msa0935850 | Msa1459760 | -0.815228 | 1.029600e-51 | -8.615850e-47 |
Msa0937330 | Msa1459760 | -0.801629 | 8.228295e-49 | -8.615850e-47 |
Msa0942550 | Msa1459760 | 0.830844 | 2.336399e-55 | -8.615850e-47 |
Msa0942560 | Msa1459760 | 0.814995 | 1.159856e-51 | -8.615850e-47 |
Msa0944730 | Msa1459760 | -0.810639 | 1.042779e-50 | -8.615850e-47 |
Msa0945100 | Msa1459760 | -0.813499 | 2.482229e-51 | -8.615850e-47 |
Msa0945120 | Msa1459760 | -0.819634 | 1.047811e-52 | -8.615850e-47 |
Msa0946690 | Msa1459760 | 0.805359 | 1.386933e-49 | -8.615850e-47 |
Msa0978700 | Msa1459760 | -0.823224 | 1.554507e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459760 | MtrunA17_Chr5g0393401 | 63.492 | 504 | 117 | 8 | 5 | 508 | 9 | 445 | 0.0 | 567 |
Msa1459760 | MtrunA17_Chr3g0146071 | 95.652 | 276 | 10 | 1 | 235 | 508 | 168 | 443 | 0.0 | 525 |
Msa1459760 | MtrunA17_Chr3g0146071 | 100.000 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 6.34e-127 | 379 |
Msa1459760 | MtrunA17_Chr3g0117101 | 61.940 | 268 | 92 | 3 | 242 | 499 | 444 | 711 | 1.93e-114 | 355 |
Msa1459760 | MtrunA17_Chr3g0117101 | 67.614 | 176 | 53 | 1 | 5 | 176 | 268 | 443 | 9.67e-78 | 258 |
Msa1459760 | MtrunA17_Chr3g0117101 | 66.477 | 176 | 55 | 1 | 5 | 176 | 13 | 188 | 1.04e-76 | 255 |
Msa1459760 | MtrunA17_Chr4g0027021 | 58.964 | 251 | 99 | 2 | 243 | 489 | 165 | 415 | 1.71e-101 | 311 |
Msa1459760 | MtrunA17_Chr4g0027021 | 58.750 | 160 | 66 | 0 | 17 | 176 | 4 | 163 | 1.79e-62 | 210 |
Msa1459760 | MtrunA17_Chr2g0321941 | 33.742 | 163 | 99 | 2 | 232 | 385 | 173 | 335 | 5.76e-20 | 92.0 |
Msa1459760 | MtrunA17_Chr4g0062751 | 28.235 | 170 | 114 | 4 | 242 | 403 | 352 | 521 | 8.36e-19 | 89.7 |
Msa1459760 | MtrunA17_Chr8g0384361 | 30.921 | 152 | 89 | 4 | 242 | 383 | 46 | 191 | 1.05e-14 | 73.9 |
Msa1459760 | MtrunA17_Chr4g0061411 | 28.758 | 153 | 103 | 4 | 238 | 384 | 177 | 329 | 1.42e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459760 | AT4G38130.1 | 80.797 | 276 | 51 | 1 | 235 | 508 | 167 | 442 | 6.51e-147 | 431 |
Msa1459760 | AT4G38130.1 | 93.220 | 177 | 11 | 1 | 1 | 177 | 1 | 176 | 3.62e-116 | 352 |
Msa1459760 | AT4G38130.2 | 80.797 | 276 | 51 | 1 | 235 | 508 | 167 | 442 | 9.61e-147 | 429 |
Msa1459760 | AT4G38130.2 | 93.220 | 177 | 11 | 1 | 1 | 177 | 1 | 176 | 4.43e-116 | 351 |
Msa1459760 | AT5G63110.1 | 72.650 | 234 | 63 | 1 | 242 | 474 | 180 | 413 | 6.20e-121 | 363 |
Msa1459760 | AT5G63110.1 | 64.571 | 175 | 59 | 2 | 2 | 174 | 4 | 177 | 5.74e-73 | 239 |
Msa1459760 | AT5G35600.1 | 42.797 | 472 | 198 | 8 | 10 | 476 | 2 | 406 | 7.82e-118 | 353 |
Msa1459760 | AT3G44680.1 | 58.400 | 250 | 102 | 2 | 243 | 491 | 165 | 413 | 4.59e-101 | 311 |
Msa1459760 | AT3G44680.1 | 57.500 | 160 | 68 | 0 | 17 | 176 | 4 | 163 | 1.16e-61 | 208 |
Msa1459760 | AT3G44490.1 | 44.138 | 145 | 80 | 1 | 347 | 491 | 2 | 145 | 1.61e-38 | 138 |
Msa1459760 | AT3G44660.1 | 39.310 | 145 | 71 | 2 | 347 | 491 | 2 | 129 | 8.84e-28 | 108 |
Msa1459760 | AT3G18520.4 | 27.570 | 214 | 146 | 4 | 242 | 446 | 305 | 518 | 2.74e-21 | 97.4 |
Msa1459760 | AT3G18520.2 | 27.570 | 214 | 146 | 4 | 242 | 446 | 305 | 518 | 3.09e-21 | 97.4 |
Msa1459760 | AT3G18520.1 | 27.488 | 211 | 144 | 4 | 242 | 443 | 305 | 515 | 6.91e-21 | 96.3 |
Msa1459760 | AT1G08460.1 | 34.706 | 170 | 99 | 3 | 228 | 385 | 157 | 326 | 3.50e-19 | 89.7 |
Msa1459760 | AT3G18520.3 | 30.986 | 142 | 94 | 3 | 242 | 379 | 305 | 446 | 2.58e-17 | 84.7 |
Msa1459760 | AT1G08460.2 | 40.385 | 104 | 58 | 1 | 240 | 339 | 172 | 275 | 8.38e-16 | 79.0 |
Msa1459760 | AT5G61070.1 | 28.947 | 152 | 102 | 4 | 239 | 384 | 220 | 371 | 2.82e-14 | 76.3 |
Msa1459760 | AT4G33470.1 | 35.714 | 98 | 62 | 1 | 242 | 339 | 231 | 327 | 4.53e-14 | 74.7 |
Msa1459760 | AT5G61060.1 | 28.947 | 152 | 102 | 4 | 239 | 384 | 187 | 338 | 7.04e-14 | 74.7 |
Msa1459760 | AT5G61060.2 | 28.846 | 156 | 101 | 4 | 239 | 384 | 187 | 342 | 1.01e-12 | 71.2 |
Find 128 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCATTACTTTGCCGATTAA+AGG | 0.164939 | tig0040438:+5188 | None:intergenic |
GAAAATAATCACCAAATTTA+TGG | 0.167816 | tig0040438:+5321 | None:intergenic |
GATGCTTTAATCTTTCAATT+AGG | 0.168446 | tig0040438:-5100 | Msa1459760:CDS |
ATATGATCCTGTTGTGTTTC+AGG | 0.173298 | tig0040438:+8134 | None:intergenic |
CGATGCTGCAACTTTCTTCT+AGG | 0.189111 | tig0040438:-6303 | Msa1459760:CDS |
TGCTCCCAGTGTTCAATTTC+AGG | 0.211713 | tig0040438:-4352 | Msa1459760:CDS |
ACTGTTTCTTTCCATAAATT+TGG | 0.213488 | tig0040438:-5332 | Msa1459760:CDS |
ATGCTTTAATCTTTCAATTA+GGG | 0.231751 | tig0040438:-5099 | Msa1459760:CDS |
TCCAGAAGCCTCACACTTCT+TGG | 0.274591 | tig0040438:+7950 | None:intergenic |
AATGTGATATTGCTGTTAAC+TGG | 0.302265 | tig0040438:-7992 | Msa1459760:CDS |
CATGCCCTTCTTGCCCACTA+TGG | 0.309164 | tig0040438:-8260 | Msa1459760:CDS |
GCCAAGAAGTGTGAGGCTTC+TGG | 0.309292 | tig0040438:-7951 | Msa1459760:CDS |
TATGATCCTGTTGTGTTTCA+GGG | 0.318503 | tig0040438:+8135 | None:intergenic |
GAAGATTGTCCTGTCTTTGA+TGG | 0.327128 | tig0040438:-8083 | Msa1459760:CDS |
GAGCATTGGGATCCAGATTC+TGG | 0.330640 | tig0040438:-3575 | Msa1459760:CDS |
CACGAGTATTATGAATATTT+CGG | 0.338501 | tig0040438:-4486 | Msa1459760:CDS |
ACAGAGGAGGTCGCCAGAAC+TGG | 0.352650 | tig0040438:-6441 | Msa1459760:CDS |
GTGACTGGCTGTCTGTATTA+TGG | 0.358068 | tig0040438:+6404 | None:intergenic |
TTTCTCTCTTGACTTTGCTT+TGG | 0.363823 | tig0040438:+3440 | None:intergenic |
TCAATGTCCATGCCAGAATC+TGG | 0.374372 | tig0040438:+3563 | None:intergenic |
AGGCCTCCTGATTCTGATCT+TGG | 0.377155 | tig0040438:-4327 | Msa1459760:CDS |
GCAAAGTAATGGAAATCTTT+AGG | 0.383254 | tig0040438:-5178 | Msa1459760:CDS |
TGTGGTGCAGACTCTTTATC+TGG | 0.383462 | tig0040438:-5134 | Msa1459760:CDS |
ACTGGCGACTTGCGTGATAT+TGG | 0.384986 | tig0040438:-5293 | Msa1459760:CDS |
TTGTTGTTCAAACCTTTAAT+CGG | 0.387133 | tig0040438:-5200 | Msa1459760:CDS |
GCGGATACGATGTGGCTTCA+TGG | 0.387603 | tig0040438:+8289 | None:intergenic |
CTTCCGTCTTCTGCACCTGA+TGG | 0.389623 | tig0040438:-8380 | Msa1459760:CDS |
GAGGTTGGGAATTATTATTA+TGG | 0.397863 | tig0040438:-8323 | Msa1459760:CDS |
TTCCGTCTTCTGCACCTGAT+GGG | 0.421600 | tig0040438:-8379 | Msa1459760:CDS |
GACTTGCGTGATATTGGATA+TGG | 0.432369 | tig0040438:-5287 | Msa1459760:CDS |
ACCTCTCCAAGATCAGAATC+AGG | 0.444389 | tig0040438:+4321 | None:intergenic |
AATGTTCCCCTCTTGCTACT+AGG | 0.449463 | tig0040438:-5041 | Msa1459760:CDS |
TCTTTCTGTCAAACTTATGC+TGG | 0.451415 | tig0040438:-8053 | Msa1459760:CDS |
TCTTTATCTGGAGACAGGTT+GGG | 0.453512 | tig0040438:-5122 | Msa1459760:CDS |
GATGCTGCAACTTTCTTCTA+GGG | 0.453738 | tig0040438:-6302 | Msa1459760:intron |
GCAACATGAAGGGTATAATC+TGG | 0.458383 | tig0040438:+4462 | None:intergenic |
GGGAATTATTATTATGGCCA+AGG | 0.467920 | tig0040438:-8317 | Msa1459760:CDS |
TGAAGATAGAGATGAGCATT+GGG | 0.469243 | tig0040438:-3588 | Msa1459760:CDS |
CTTTCCTGAAATTGAACACT+GGG | 0.475024 | tig0040438:+4348 | None:intergenic |
CTCTTTATCTGGAGACAGGT+TGG | 0.477261 | tig0040438:-5123 | Msa1459760:CDS |
TATTTCTATGATCCTGAGGT+TGG | 0.479248 | tig0040438:-8338 | Msa1459760:CDS |
ATTTCTATGATCCTGAGGTT+GGG | 0.481090 | tig0040438:-8337 | Msa1459760:CDS |
TTCTGTCAAACTTATGCTGG+AGG | 0.481239 | tig0040438:-8050 | Msa1459760:CDS |
CATAATCATCAGCATGAAAA+CGG | 0.481588 | tig0040438:+8180 | None:intergenic |
ATACAGCAACCACCCAGTTC+TGG | 0.484751 | tig0040438:+6428 | None:intergenic |
CGTGATATTGGATATGGAAA+GGG | 0.488820 | tig0040438:-5281 | Msa1459760:CDS |
TAATAATAATTCCCAACCTC+AGG | 0.489340 | tig0040438:+8326 | None:intergenic |
CACTGGAGAACAACTGCACC+GGG | 0.492326 | tig0040438:+5155 | None:intergenic |
GATATTATCAAGTAAATGTC+GGG | 0.495895 | tig0040438:+4413 | None:intergenic |
TCGTTTCTATCTCTAGTGAC+TGG | 0.503731 | tig0040438:+6389 | None:intergenic |
ACCTTTAATCGGCAAAGTAA+TGG | 0.504079 | tig0040438:-5189 | Msa1459760:CDS |
ATGAAGATAGAGATGAGCAT+TGG | 0.505454 | tig0040438:-3589 | Msa1459760:CDS |
CAGACTCTTTATCTGGAGAC+AGG | 0.508402 | tig0040438:-5127 | Msa1459760:CDS |
CATAACCCCTGAAACACAAC+AGG | 0.512836 | tig0040438:-8141 | Msa1459760:CDS |
TCCCTGTCTCTAGCAGGAAA+AGG | 0.513158 | tig0040438:+8209 | None:intergenic |
GTGGTGGCGGTTACACCATT+CGG | 0.513823 | tig0040438:-5019 | Msa1459760:CDS |
TAAGAAGTTCTAAGATTGCA+AGG | 0.514247 | tig0040438:+7904 | None:intergenic |
TATTCATAATACTCGTGCTC+TGG | 0.514478 | tig0040438:+4492 | None:intergenic |
TTCGGAATGTTGCTCGGTGT+TGG | 0.515145 | tig0040438:-5001 | Msa1459760:CDS |
CAATCCATAGTGGGCAAGAA+GGG | 0.516417 | tig0040438:+8256 | None:intergenic |
ACTTATGCTGGAGGTTCAGT+TGG | 0.516719 | tig0040438:-8041 | Msa1459760:CDS |
CAAAGGTCCCTGTCTCTAGC+AGG | 0.518536 | tig0040438:+8203 | None:intergenic |
TATGCTGGAGGTTCAGTTGG+TGG | 0.521919 | tig0040438:-8038 | Msa1459760:CDS |
CGGATACGATGTGGCTTCAT+GGG | 0.525525 | tig0040438:+8290 | None:intergenic |
TGTTACTTGGGGCAACATGA+AGG | 0.526854 | tig0040438:+4451 | None:intergenic |
GTTGTAGCGTGTTCTATATG+TGG | 0.527612 | tig0040438:-5417 | Msa1459760:intron |
TGAATCTCAGCTCAATGATC+CGG | 0.531268 | tig0040438:-3413 | Msa1459760:CDS |
GAGTATAGGCCATCAAAGAC+AGG | 0.531330 | tig0040438:+8074 | None:intergenic |
CAGAGGAGGTCGCCAGAACT+GGG | 0.533138 | tig0040438:-6440 | Msa1459760:CDS |
GATATTGCTGTTAACTGGGC+TGG | 0.533945 | tig0040438:-7987 | Msa1459760:CDS |
GCAATCCATAGTGGGCAAGA+AGG | 0.536235 | tig0040438:+8255 | None:intergenic |
TGCTTTAATCTTTCAATTAG+GGG | 0.539074 | tig0040438:-5098 | Msa1459760:CDS |
CCCCTCTTGCTACTAGGTGG+TGG | 0.539586 | tig0040438:-5035 | Msa1459760:CDS |
ACACTGGAGAACAACTGCAC+CGG | 0.541503 | tig0040438:+5154 | None:intergenic |
CCTTTCCTGAAATTGAACAC+TGG | 0.543136 | tig0040438:+4347 | None:intergenic |
ACACCATTCGGAATGTTGCT+CGG | 0.543584 | tig0040438:-5007 | Msa1459760:CDS |
ATGATCCTGTTGTGTTTCAG+GGG | 0.546511 | tig0040438:+8136 | None:intergenic |
GCGTGATATTGGATATGGAA+AGG | 0.546993 | tig0040438:-5282 | Msa1459760:CDS |
GGATATTATCAAGTAAATGT+CGG | 0.550643 | tig0040438:+4412 | None:intergenic |
CTCTAGCAGGAAAAGGCTTG+TGG | 0.551357 | tig0040438:+8216 | None:intergenic |
CTTAATGTTCCACTTGATGA+CGG | 0.553928 | tig0040438:-5245 | Msa1459760:CDS |
AAGTTTGACAGAAAGAGTAT+AGG | 0.555370 | tig0040438:+8060 | None:intergenic |
AGATGGATATAGCAGAATCC+AGG | 0.557654 | tig0040438:-6490 | Msa1459760:intron |
CCAGTGTTCAATTTCAGGAA+AGG | 0.561391 | tig0040438:-4347 | Msa1459760:CDS |
CAACTCAAACGCTTTAACGT+TGG | 0.566804 | tig0040438:-8107 | Msa1459760:CDS |
TCATCAATGCCGTCATCAAG+TGG | 0.566825 | tig0040438:+5236 | None:intergenic |
ATTGATATCCACCATGGAGA+TGG | 0.567849 | tig0040438:-5392 | Msa1459760:CDS |
TCATGTTGCCCCAAGTAACA+TGG | 0.568928 | tig0040438:-4448 | Msa1459760:CDS |
TGGATTGCTTCAGCACATGC+AGG | 0.569680 | tig0040438:-8240 | Msa1459760:CDS |
CTTCCTCCACACCATCTCCA+TGG | 0.571898 | tig0040438:+5381 | None:intergenic |
CTCTTGCTACTAGGTGGTGG+CGG | 0.573617 | tig0040438:-5032 | Msa1459760:CDS |
GTTACTTGGGGCAACATGAA+GGG | 0.581802 | tig0040438:+4452 | None:intergenic |
ATGTGATATTGCTGTTAACT+GGG | 0.581883 | tig0040438:-7991 | Msa1459760:CDS |
GATTCTCAAGTAGCTTAGAT+CGG | 0.588060 | tig0040438:+4391 | None:intergenic |
TCCGTCTTCTGCACCTGATG+GGG | 0.590771 | tig0040438:-8378 | Msa1459760:CDS |
ATTGCTGTTAACTGGGCTGG+TGG | 0.595034 | tig0040438:-7984 | Msa1459760:CDS |
TGCTCGGTGTTGGTGCTATG+AGG | 0.602036 | tig0040438:-4991 | Msa1459760:intron |
ACCCCATCAGGTGCAGAAGA+CGG | 0.603020 | tig0040438:+8377 | None:intergenic |
ATGCTATTTCTATGATCCTG+AGG | 0.612816 | tig0040438:-8342 | Msa1459760:CDS |
TGTGCTGAAGCAATCCATAG+TGG | 0.612825 | tig0040438:+8246 | None:intergenic |
GTGCTGAAGCAATCCATAGT+GGG | 0.613771 | tig0040438:+8247 | None:intergenic |
ATAAAGAGTCTGCACCACAC+TGG | 0.616250 | tig0040438:+5138 | None:intergenic |
GTAATGGAAATCTTTAGGCC+CGG | 0.623225 | tig0040438:-5173 | Msa1459760:CDS |
TCCTGATTCTGATCTTGGAG+AGG | 0.628534 | tig0040438:-4322 | Msa1459760:intron |
CGCCACCACCTAGTAGCAAG+AGG | 0.632522 | tig0040438:+5033 | None:intergenic |
GTTCCCCTCTTGCTACTAGG+TGG | 0.633802 | tig0040438:-5038 | Msa1459760:CDS |
GCCACCACCTAGTAGCAAGA+GGG | 0.635670 | tig0040438:+5034 | None:intergenic |
AACAGAAGCAGGAAGAACAG+AGG | 0.637098 | tig0040438:-6457 | Msa1459760:CDS |
GTGGCTTCATGGGATGACCT+TGG | 0.639461 | tig0040438:+8300 | None:intergenic |
AGAAGCAGGAAGAACAGAGG+AGG | 0.639684 | tig0040438:-6454 | Msa1459760:CDS |
AGAACTTCTTAAACAGCACG+AGG | 0.642387 | tig0040438:-7892 | Msa1459760:intron |
CAAAAGATAAATACACACAC+CGG | 0.646114 | tig0040438:+3394 | None:intergenic |
TTGGGATCCAGATTCTGGCA+TGG | 0.646557 | tig0040438:-3570 | Msa1459760:CDS |
CAAGAAGGGCATGTGTCATG+CGG | 0.648533 | tig0040438:+8270 | None:intergenic |
CATCAGCATGAAAACGGCAA+AGG | 0.654492 | tig0040438:+8186 | None:intergenic |
ACACCGAGCAACATTCCGAA+TGG | 0.663792 | tig0040438:+5004 | None:intergenic |
TATCCACCATGGAGATGGTG+TGG | 0.668224 | tig0040438:-5387 | Msa1459760:CDS |
CCACCATGGAGATGGTGTGG+AGG | 0.672038 | tig0040438:-5384 | Msa1459760:CDS |
CCACCACCTAGTAGCAAGAG+GGG | 0.675201 | tig0040438:+5035 | None:intergenic |
GCATGGACATTGATGTTGAA+CGG | 0.679554 | tig0040438:-3553 | Msa1459760:intron |
GTGGACATTGATATCCACCA+TGG | 0.680210 | tig0040438:-5398 | Msa1459760:CDS |
CCTCCACACCATCTCCATGG+TGG | 0.680490 | tig0040438:+5384 | None:intergenic |
GCTTCACACATGGATGTCAG+TGG | 0.682917 | tig0040438:-8410 | None:intergenic |
GCATCATGCCAAGAAGTGTG+AGG | 0.688961 | tig0040438:-7958 | Msa1459760:CDS |
GGTGCAGTTGTTCTCCAGTG+TGG | 0.689736 | tig0040438:-5152 | Msa1459760:CDS |
TGTGTCATGCGGATACGATG+TGG | 0.693446 | tig0040438:+8281 | None:intergenic |
TCTCCAAGATCAGAATCAGG+AGG | 0.695400 | tig0040438:+4324 | None:intergenic |
AGGAGGTCGCCAGAACTGGG+TGG | 0.742881 | tig0040438:-6437 | Msa1459760:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAAAAA+CGG | + | tig0040438:5554-5573 | None:intergenic | 0.0% |
!!! | TGTTCAAAAATAATTTTATA+GGG | + | tig0040438:7730-7749 | None:intergenic | 10.0% |
!!! | AATTTTTCTTCATACTTTAA+AGG | - | tig0040438:3955-3974 | Msa1459760:intron | 15.0% |
!! | ATAAGTTATAACTATAAGTT+TGG | - | tig0040438:4558-4577 | Msa1459760:intron | 15.0% |
!!! | TGAATTTATAATATTTTTGG+TGG | - | tig0040438:5579-5598 | Msa1459760:intron | 15.0% |
!! | AGTAGATATAAAATAATTAG+AGG | - | tig0040438:5987-6006 | Msa1459760:intron | 15.0% |
!!! | GTGTTCAAAAATAATTTTAT+AGG | + | tig0040438:7731-7750 | None:intergenic | 15.0% |
!!! | TACTTTAAAGGTATATTTTG+TGG | - | tig0040438:3967-3986 | Msa1459760:intron | 20.0% |
!!! | TTTTCTTTAGAACTGATTTA+TGG | - | tig0040438:4016-4035 | Msa1459760:intron | 20.0% |
!!! | AAGTACTGAAGTTAATATTT+AGG | - | tig0040438:4040-4059 | Msa1459760:intron | 20.0% |
!!! | ATATTTTACAACACTAATGT+TGG | - | tig0040438:4275-4294 | Msa1459760:intron | 20.0% |
!! | TTAAAGAATACATATCAGAA+AGG | + | tig0040438:4604-4623 | None:intergenic | 20.0% |
!! | TATTCTTTAAATCTCACATA+GGG | - | tig0040438:4614-4633 | Msa1459760:intron | 20.0% |
!! | ACTAAATACTAACATTATTC+TGG | + | tig0040438:4691-4710 | None:intergenic | 20.0% |
!! | GAATAATGTTAGTATTTAGT+TGG | - | tig0040438:4691-4710 | Msa1459760:intron | 20.0% |
!! | CAAATATTTGTACATTAATG+TGG | - | tig0040438:4769-4788 | Msa1459760:intron | 20.0% |
!!! | ATATATGTCAGATTTTTTAC+TGG | + | tig0040438:4957-4976 | None:intergenic | 20.0% |
!! | AACAATTAAAACTCAATTGA+TGG | - | tig0040438:5087-5106 | Msa1459760:CDS | 20.0% |
!!! | TATCATTTTGTTGTTATTTG+AGG | + | tig0040438:5171-5190 | None:intergenic | 20.0% |
!! | TTAAAGAAAACATACTTTGA+CGG | - | tig0040438:5769-5788 | Msa1459760:intron | 20.0% |
!! | TGTATTGAAACTAAATAGTT+TGG | + | tig0040438:5814-5833 | None:intergenic | 20.0% |
!! | ACTGTTTCAAAAAGAAATAA+TGG | - | tig0040438:5885-5904 | Msa1459760:intron | 20.0% |
!! | TATATCTACTAAATATGAGT+AGG | + | tig0040438:5977-5996 | None:intergenic | 20.0% |
!! | TTATCGTGTTAATTATACAA+TGG | - | tig0040438:6019-6038 | Msa1459760:intron | 20.0% |
!!! | ATTGCATAGTTTAGTTTATA+TGG | - | tig0040438:6084-6103 | Msa1459760:intron | 20.0% |
!!! | TTGCATAGTTTAGTTTATAT+GGG | - | tig0040438:6085-6104 | Msa1459760:intron | 20.0% |
!!! | TATTGTTTCTGAATATTTCA+GGG | + | tig0040438:6232-6251 | None:intergenic | 20.0% |
!! | GAAAATAATCACCAAATTTA+TGG | + | tig0040438:6476-6495 | None:intergenic | 20.0% |
!! | ATGCTTTAATCTTTCAATTA+GGG | - | tig0040438:6695-6714 | Msa1459760:intron | 20.0% |
!! | AGTGATATTACATCAAATAA+AGG | + | tig0040438:6844-6863 | None:intergenic | 20.0% |
!! | GATGTAATATCACTAATATA+AGG | - | tig0040438:6850-6869 | Msa1459760:intron | 20.0% |
!!! | GTAGCTTGATTTTATTTATA+AGG | - | tig0040438:6872-6891 | Msa1459760:intron | 20.0% |
!!! | TATAATTCAACTAGATGTTT+TGG | + | tig0040438:6922-6941 | None:intergenic | 20.0% |
!!! | CCAATAAAATTTTATGTACT+TGG | + | tig0040438:7227-7246 | None:intergenic | 20.0% |
!!! | CCAAGTACATAAAATTTTAT+TGG | - | tig0040438:7224-7243 | Msa1459760:intron | 20.0% |
!!! | ATTTTATTGGCTATTTGTTA+AGG | - | tig0040438:7237-7256 | Msa1459760:intron | 20.0% |
!! | TTATACAAGTATTTGAAAAC+AGG | - | tig0040438:7643-7662 | Msa1459760:intron | 20.0% |
!! | TTAATTTCACTTGTATTACT+TGG | + | tig0040438:7672-7691 | None:intergenic | 20.0% |
!!! | TCAGTTCTTCTATTTAATTT+TGG | + | tig0040438:8079-8098 | None:intergenic | 20.0% |
!! | AATTAAATAGAAGAACTGAA+TGG | - | tig0040438:8080-8099 | Msa1459760:CDS | 20.0% |
! | TGAAGAAAAATTAAAGCAGA+GGG | + | tig0040438:3947-3966 | None:intergenic | 25.0% |
! | ATGAAGAAAAATTAAAGCAG+AGG | + | tig0040438:3948-3967 | None:intergenic | 25.0% |
! | TCTAACAGAAAATAAGATCA+AGG | + | tig0040438:4118-4137 | None:intergenic | 25.0% |
!! | GTTGTAAAATATACTGACTA+TGG | + | tig0040438:4267-4286 | None:intergenic | 25.0% |
!!! | ACTTTTATTTAGATGTACTG+AGG | + | tig0040438:4352-4371 | None:intergenic | 25.0% |
! | CAGTTTAGTGTTCAATTTAA+AGG | - | tig0040438:4404-4423 | Msa1459760:CDS | 25.0% |
! | TTCTATAGTATTTGACAACA+TGG | - | tig0040438:4442-4461 | Msa1459760:CDS | 25.0% |
! | GTATTCTTTAAATCTCACAT+AGG | - | tig0040438:4613-4632 | Msa1459760:intron | 25.0% |
! | ATTCTTTAAATCTCACATAG+GGG | - | tig0040438:4615-4634 | Msa1459760:intron | 25.0% |
! | ATGTTAGTATTTAGTTGGTT+TGG | - | tig0040438:4696-4715 | Msa1459760:intron | 25.0% |
! | TTAACTCTAACAGTTCAAAT+TGG | + | tig0040438:4728-4747 | None:intergenic | 25.0% |
! | TTTGAACTGTTAGAGTTAAT+CGG | - | tig0040438:4729-4748 | Msa1459760:intron | 25.0% |
!!! | TATTTGAGTTGAGAAACAAA+TGG | + | tig0040438:4755-4774 | None:intergenic | 25.0% |
! | ATATTTGTACATTAATGTGG+TGG | - | tig0040438:4772-4791 | Msa1459760:intron | 25.0% |
!! | CAATAAAATTTTGTTCTCCT+AGG | - | tig0040438:4845-4864 | Msa1459760:intron | 25.0% |
! | AGAATGAAAAATAGACAGTA+AGG | - | tig0040438:5233-5252 | Msa1459760:CDS | 25.0% |
! | AACAAAATTAGAGAATGAGA+TGG | - | tig0040438:5287-5306 | Msa1459760:CDS | 25.0% |
! | AAAAAAAAAAAAACGGAACC+TGG | + | tig0040438:5547-5566 | None:intergenic | 25.0% |
! | ACAAAATCGTAGTATTCAAA+TGG | + | tig0040438:5915-5934 | None:intergenic | 25.0% |
!!! | GTATTGTTTCTGAATATTTC+AGG | + | tig0040438:6233-6252 | None:intergenic | 25.0% |
! | AAATATTCAGAAACAATACG+AGG | - | tig0040438:6234-6253 | Msa1459760:intron | 25.0% |
! | AATATTCAGAAACAATACGA+GGG | - | tig0040438:6235-6254 | Msa1459760:intron | 25.0% |
!! | TAAACTGTAGAAAGTTTGTT+TGG | - | tig0040438:6260-6279 | Msa1459760:intron | 25.0% |
!! | ACTGTTTCTTTCCATAAATT+TGG | - | tig0040438:6462-6481 | Msa1459760:CDS | 25.0% |
!!! | AAATTTGGTGATTATTTTCC+TGG | - | tig0040438:6477-6496 | Msa1459760:CDS | 25.0% |
!! | TTGTTGTTCAAACCTTTAAT+CGG | - | tig0040438:6594-6613 | Msa1459760:intron | 25.0% |
! | GATGCTTTAATCTTTCAATT+AGG | - | tig0040438:6694-6713 | Msa1459760:intron | 25.0% |
! | TGCTTTAATCTTTCAATTAG+GGG | - | tig0040438:6696-6715 | Msa1459760:intron | 25.0% |
! | CACGAGTATTATGAATATTT+CGG | - | tig0040438:7308-7327 | Msa1459760:intron | 25.0% |
!!! | TTTTGTTTTCCATGTTACTT+GGG | + | tig0040438:7358-7377 | None:intergenic | 25.0% |
!!! | TTTTTGTTTTCCATGTTACT+TGG | + | tig0040438:7359-7378 | None:intergenic | 25.0% |
! | GATATTATCAAGTAAATGTC+GGG | + | tig0040438:7384-7403 | None:intergenic | 25.0% |
! | GGATATTATCAAGTAAATGT+CGG | + | tig0040438:7385-7404 | None:intergenic | 25.0% |
!!! | AGAAAGTATTTGCACAAAAT+AGG | + | tig0040438:7569-7588 | None:intergenic | 25.0% |
!!! | ACAGAAGTTATTTTGTAAAC+AGG | + | tig0040438:7611-7630 | None:intergenic | 25.0% |
!!! | TTTTTTGAATCCCTATATGT+GGG | + | tig0040438:7777-7796 | None:intergenic | 25.0% |
! | TTCATCCTAGAATATATGAT+AGG | - | tig0040438:8051-8070 | Msa1459760:CDS | 25.0% |
TAATAATAATTCCCAACCTC+AGG | + | tig0040438:3471-3490 | None:intergenic | 30.0% | |
GAGGTTGGGAATTATTATTA+TGG | - | tig0040438:3471-3490 | Msa1459760:intron | 30.0% | |
CATAATCATCAGCATGAAAA+CGG | + | tig0040438:3617-3636 | None:intergenic | 30.0% | |
! | AAGTTTGACAGAAAGAGTAT+AGG | + | tig0040438:3737-3756 | None:intergenic | 30.0% |
! | AATGTGATATTGCTGTTAAC+TGG | - | tig0040438:3802-3821 | Msa1459760:intron | 30.0% |
! | ATGTGATATTGCTGTTAACT+GGG | - | tig0040438:3803-3822 | Msa1459760:intron | 30.0% |
!! | TAAGAAGTTCTAAGATTGCA+AGG | + | tig0040438:3893-3912 | None:intergenic | 30.0% |
! | GTATATTTTGTGGAATCGAT+TGG | - | tig0040438:3977-3996 | Msa1459760:intron | 30.0% |
! | TATTTTCTGTTAGATCCTTC+TGG | - | tig0040438:4124-4143 | Msa1459760:intron | 30.0% |
! | ACATTTCTTTTCTCCTAACA+AGG | - | tig0040438:4314-4333 | Msa1459760:intron | 30.0% |
! | ACACTAAACTGACTAGTTAA+CGG | + | tig0040438:4395-4414 | None:intergenic | 30.0% |
TACATATCAGAAAGGACATA+CGG | + | tig0040438:4596-4615 | None:intergenic | 30.0% | |
AGAGAAAACTGTAGTATAAC+TGG | + | tig0040438:4807-4826 | None:intergenic | 30.0% | |
ATATTATGGAAGACTATCCT+AGG | + | tig0040438:4865-4884 | None:intergenic | 30.0% | |
TCATTGCAGCACATATATTA+TGG | + | tig0040438:4879-4898 | None:intergenic | 30.0% | |
! | ATTCTTTTCTGCAGTTCTTT+TGG | + | tig0040438:5045-5064 | None:intergenic | 30.0% |
!!! | CTTCTGTTTTTTTTATCTCC+TGG | + | tig0040438:5325-5344 | None:intergenic | 30.0% |
GAGATAAAAAAAACAGAAGC+AGG | - | tig0040438:5326-5345 | Msa1459760:CDS | 30.0% | |
AACAGTATGATACCAAATTG+AGG | + | tig0040438:5871-5890 | None:intergenic | 30.0% | |
! | ACAAACCTCAAAATGGTTTT+TGG | + | tig0040438:6123-6142 | None:intergenic | 30.0% |
!!! | AACCATTTTGAGGTTTGTTA+TGG | - | tig0040438:6125-6144 | Msa1459760:intron | 30.0% |
ATCCATAACAAACCTCAAAA+TGG | + | tig0040438:6130-6149 | None:intergenic | 30.0% | |
ATATGAGCATAATCATCAAG+CGG | + | tig0040438:6185-6204 | None:intergenic | 30.0% | |
! | GCAAAGTAATGGAAATCTTT+AGG | - | tig0040438:6616-6635 | Msa1459760:intron | 30.0% |
TCATTATGTAAAACAAGCGA+TGG | - | tig0040438:7009-7028 | Msa1459760:intron | 30.0% | |
TATAGTTCGAGACTAGTATA+AGG | + | tig0040438:7068-7087 | None:intergenic | 30.0% | |
!! | TTTGTTTTCCATGTTACTTG+GGG | + | tig0040438:7357-7376 | None:intergenic | 30.0% |
ATGCGTGAAATAAAGATAAC+GGG | + | tig0040438:7521-7540 | None:intergenic | 30.0% | |
CATGCGTGAAATAAAGATAA+CGG | + | tig0040438:7522-7541 | None:intergenic | 30.0% | |
!!! | CTTTTTTGAATCCCTATATG+TGG | + | tig0040438:7778-7797 | None:intergenic | 30.0% |
ACACATCATTAACTATCCTT+TGG | - | tig0040438:8018-8037 | Msa1459760:CDS | 30.0% | |
!! | CATATATTCTAGGATGAAGA+AGG | + | tig0040438:8049-8068 | None:intergenic | 30.0% |
AAAATAGCTAGGACAAGTTA+GGG | + | tig0040438:8123-8142 | None:intergenic | 30.0% | |
AAAAATAGCTAGGACAAGTT+AGG | + | tig0040438:8124-8143 | None:intergenic | 30.0% | |
CAAAAGATAAATACACACAC+CGG | + | tig0040438:8403-8422 | None:intergenic | 30.0% | |
!! | ATGCTATTTCTATGATCCTG+AGG | - | tig0040438:3452-3471 | Msa1459760:CDS | 35.0% |
! | TATTTCTATGATCCTGAGGT+TGG | - | tig0040438:3456-3475 | Msa1459760:intron | 35.0% |
ATTTCTATGATCCTGAGGTT+GGG | - | tig0040438:3457-3476 | Msa1459760:intron | 35.0% | |
GGGAATTATTATTATGGCCA+AGG | - | tig0040438:3477-3496 | Msa1459760:intron | 35.0% | |
TATGATCCTGTTGTGTTTCA+GGG | + | tig0040438:3662-3681 | None:intergenic | 35.0% | |
ATATGATCCTGTTGTGTTTC+AGG | + | tig0040438:3663-3682 | None:intergenic | 35.0% | |
TCTTTCTGTCAAACTTATGC+TGG | - | tig0040438:3741-3760 | Msa1459760:intron | 35.0% | |
TTACAACACTAATGTTGGTC+AGG | - | tig0040438:4280-4299 | Msa1459760:intron | 35.0% | |
GTTAGGAGAAAAGAAATGTG+TGG | + | tig0040438:4313-4332 | None:intergenic | 35.0% | |
TTAAATCTCACATAGGGGTT+AGG | - | tig0040438:4620-4639 | Msa1459760:intron | 35.0% | |
! | GTTCTAAGCAATCATGTCAA+TGG | - | tig0040438:4911-4930 | Msa1459760:intron | 35.0% |
! | TGGTGATGAGGTTATGATAT+AGG | + | tig0040438:5136-5155 | None:intergenic | 35.0% |
AAAAATAGACAGTAAGGCAG+AGG | - | tig0040438:5239-5258 | Msa1459760:CDS | 35.0% | |
!! | TTTGGTGGATATTTTTGCCA+TGG | - | tig0040438:5594-5613 | Msa1459760:intron | 35.0% |
GTTTCAATACATGCTTCTGT+TGG | - | tig0040438:5823-5842 | Msa1459760:intron | 35.0% | |
! | AATTGAGGCAGCACTTTTAA+TGG | + | tig0040438:5856-5875 | None:intergenic | 35.0% |
!! | TTAAAAGTGCTGCCTCAATT+TGG | - | tig0040438:5856-5875 | Msa1459760:intron | 35.0% |
! | ACAAGCCAAAAACCATTTTG+AGG | - | tig0040438:6115-6134 | Msa1459760:intron | 35.0% |
ATCGAAAAATTCCTCGACTA+TGG | - | tig0040438:6148-6167 | Msa1459760:intron | 35.0% | |
CGTGATATTGGATATGGAAA+GGG | - | tig0040438:6513-6532 | Msa1459760:intron | 35.0% | |
CTTAATGTTCCACTTGATGA+CGG | - | tig0040438:6549-6568 | Msa1459760:intron | 35.0% | |
ACCTTTAATCGGCAAAGTAA+TGG | - | tig0040438:6605-6624 | Msa1459760:intron | 35.0% | |
! | TCCATTACTTTGCCGATTAA+AGG | + | tig0040438:6609-6628 | None:intergenic | 35.0% |
TATTCATAATACTCGTGCTC+TGG | + | tig0040438:7305-7324 | None:intergenic | 35.0% | |
GATTCTCAAGTAGCTTAGAT+CGG | + | tig0040438:7406-7425 | None:intergenic | 35.0% | |
CTTTCCTGAAATTGAACACT+GGG | + | tig0040438:7449-7468 | None:intergenic | 35.0% | |
TGCGTGAAATAAAGATAACG+GGG | + | tig0040438:7520-7539 | None:intergenic | 35.0% | |
TTTGAACACACTGATGCATA+AGG | - | tig0040438:7742-7761 | Msa1459760:intron | 35.0% | |
ACTGTATTATCCCATGCAAA+AGG | - | tig0040438:7811-7830 | Msa1459760:intron | 35.0% | |
! | AGAAGTGGGGTATTCTATTA+AGG | + | tig0040438:7982-8001 | None:intergenic | 35.0% |
AGTAGTGTAGTAGAAGAAGT+GGG | + | tig0040438:7996-8015 | None:intergenic | 35.0% | |
!! | TATTCTAGGATGAAGAAGGT+GGG | + | tig0040438:8045-8064 | None:intergenic | 35.0% |
!! | ATATTCTAGGATGAAGAAGG+TGG | + | tig0040438:8046-8065 | None:intergenic | 35.0% |
TGGCTCCTATCATATATTCT+AGG | + | tig0040438:8059-8078 | None:intergenic | 35.0% | |
GAAGAGAGTCAAAAATAGCT+AGG | + | tig0040438:8134-8153 | None:intergenic | 35.0% | |
AATAGGGAATGAGTTCAAAC+AGG | + | tig0040438:8159-8178 | None:intergenic | 35.0% | |
TTCCTGGAGAATTGTGAATA+GGG | + | tig0040438:8175-8194 | None:intergenic | 35.0% | |
ATTCCTGGAGAATTGTGAAT+AGG | + | tig0040438:8176-8195 | None:intergenic | 35.0% | |
ATGAAGATAGAGATGAGCAT+TGG | - | tig0040438:8205-8224 | Msa1459760:CDS | 35.0% | |
TGAAGATAGAGATGAGCATT+GGG | - | tig0040438:8206-8225 | Msa1459760:CDS | 35.0% | |
ATCGCTGATAAATGAGGTAA+AGG | + | tig0040438:8329-8348 | None:intergenic | 35.0% | |
GAGAATATCGCTGATAAATG+AGG | + | tig0040438:8335-8354 | None:intergenic | 35.0% | |
TTTCTCTCTTGACTTTGCTT+TGG | + | tig0040438:8357-8376 | None:intergenic | 35.0% | |
! | ACTTTTCTCTTTACCCCATC+AGG | + | tig0040438:3432-3451 | None:intergenic | 40.0% |
ATGATCCTGTTGTGTTTCAG+GGG | + | tig0040438:3661-3680 | None:intergenic | 40.0% | |
CAACTCAAACGCTTTAACGT+TGG | - | tig0040438:3687-3706 | Msa1459760:intron | 40.0% | |
GAAGATTGTCCTGTCTTTGA+TGG | - | tig0040438:3711-3730 | Msa1459760:intron | 40.0% | |
TTCTGTCAAACTTATGCTGG+AGG | - | tig0040438:3744-3763 | Msa1459760:intron | 40.0% | |
AGAACTTCTTAAACAGCACG+AGG | - | tig0040438:3902-3921 | Msa1459760:intron | 40.0% | |
TTAAAGCAGAGGGAATTCCA+CGG | + | tig0040438:3937-3956 | None:intergenic | 40.0% | |
AGACTTGCATGCTATATACG+AGG | - | tig0040438:4074-4093 | Msa1459760:intron | 40.0% | |
! | CTTCTGGAAACTCATTCACA+GGG | - | tig0040438:4140-4159 | Msa1459760:intron | 40.0% |
! | GAAGACATAAGTGCCTTGTT+AGG | + | tig0040438:4330-4349 | None:intergenic | 40.0% |
! | ACTGACTAGTTAACGGACAA+TGG | + | tig0040438:4388-4407 | None:intergenic | 40.0% |
! | TTTCTAGGAGAATGTTCAGC+TGG | - | tig0040438:4477-4496 | Msa1459760:CDS | 40.0% |
! | TTCTAGGAGAATGTTCAGCT+GGG | - | tig0040438:4478-4497 | Msa1459760:CDS | 40.0% |
! | GTCATGCACAAAGCATCAAT+AGG | + | tig0040438:4669-4688 | None:intergenic | 40.0% |
!! | CAGTTTTCTCTTGTTTGCTC+TGG | - | tig0040438:4816-4835 | Msa1459760:intron | 40.0% |
CTAAGCAATCATGTCAATGG+TGG | - | tig0040438:4914-4933 | Msa1459760:intron | 40.0% | |
TCATAACCTCATCACCATCA+AGG | - | tig0040438:5139-5158 | Msa1459760:CDS | 40.0% | |
! | ATTTGAGGTCTTGACCTTGA+TGG | + | tig0040438:5156-5175 | None:intergenic | 40.0% |
AGATGGATATAGCAGAATCC+AGG | - | tig0040438:5304-5323 | Msa1459760:CDS | 40.0% | |
TCGTTTCTATCTCTAGTGAC+TGG | + | tig0040438:5408-5427 | None:intergenic | 40.0% | |
GATGCTGCAACTTTCTTCTA+GGG | - | tig0040438:5492-5511 | Msa1459760:intron | 40.0% | |
!!! | TCTTCTAGGGTTTTCCATCA+CGG | - | tig0040438:5505-5524 | Msa1459760:intron | 40.0% |
TTGTAATTTCCACCGTAGAG+TGG | + | tig0040438:5690-5709 | None:intergenic | 40.0% | |
TACGGTGGAAATTACAACAC+TGG | - | tig0040438:5693-5712 | Msa1459760:intron | 40.0% | |
!! | ACAACACTGGTTCTATGTGT+AGG | - | tig0040438:5706-5725 | Msa1459760:intron | 40.0% |
!! | TTACCTACTGCTTTAAGAGC+AGG | + | tig0040438:6059-6078 | None:intergenic | 40.0% |
AAATTCCTCGACTATGGCAT+AGG | - | tig0040438:6154-6173 | Msa1459760:intron | 40.0% | |
TAAAACCTATGCCATAGTCG+AGG | + | tig0040438:6162-6181 | None:intergenic | 40.0% | |
! | CTGTAGAAAGTTTGTTTGGC+AGG | - | tig0040438:6264-6283 | Msa1459760:intron | 40.0% |
GTTGTAGCGTGTTCTATATG+TGG | - | tig0040438:6377-6396 | Msa1459760:CDS | 40.0% | |
ATTGATATCCACCATGGAGA+TGG | - | tig0040438:6402-6421 | Msa1459760:CDS | 40.0% | |
! | GGTGATTATTTTCCTGGTAC+TGG | - | tig0040438:6483-6502 | Msa1459760:intron | 40.0% |
GACTTGCGTGATATTGGATA+TGG | - | tig0040438:6507-6526 | Msa1459760:intron | 40.0% | |
GCGTGATATTGGATATGGAA+AGG | - | tig0040438:6512-6531 | Msa1459760:intron | 40.0% | |
! | GTAATGGAAATCTTTAGGCC+CGG | - | tig0040438:6621-6640 | Msa1459760:intron | 40.0% |
TCTTTATCTGGAGACAGGTT+GGG | - | tig0040438:6672-6691 | Msa1459760:intron | 40.0% | |
ATGTCACATTGCATTCTGAG+AGG | + | tig0040438:7117-7136 | None:intergenic | 40.0% | |
! | TGGCTATTTGTTAAGGCAGA+CGG | - | tig0040438:7244-7263 | Msa1459760:intron | 40.0% |
! | GCAACATGAAGGGTATAATC+TGG | + | tig0040438:7335-7354 | None:intergenic | 40.0% |
CCTTTCCTGAAATTGAACAC+TGG | + | tig0040438:7450-7469 | None:intergenic | 40.0% | |
CCAGTGTTCAATTTCAGGAA+AGG | - | tig0040438:7447-7466 | Msa1459760:intron | 40.0% | |
AATCCCTATATGTGGGTAGT+GGG | + | tig0040438:7770-7789 | None:intergenic | 40.0% | |
!! | TCAAGTTGCTCCTTTTGCAT+GGG | + | tig0040438:7824-7843 | None:intergenic | 40.0% |
!!! | TTCAAGTTGCTCCTTTTGCA+TGG | + | tig0040438:7825-7844 | None:intergenic | 40.0% |
GAGCAACTTGAATACTTCAC+AGG | - | tig0040438:7833-7852 | Msa1459760:intron | 40.0% | |
GTGTCAATAGTCCTATACTC+AGG | - | tig0040438:7904-7923 | Msa1459760:CDS | 40.0% | |
GGGGAATTTAAGAGTAAGGA+AGG | + | tig0040438:7958-7977 | None:intergenic | 40.0% | |
AGGAGGGGAATTTAAGAGTA+AGG | + | tig0040438:7962-7981 | None:intergenic | 40.0% | |
! | TGGGGTATTCTATTAAGGAG+GGG | + | tig0040438:7977-7996 | None:intergenic | 40.0% |
! | GTGGGGTATTCTATTAAGGA+GGG | + | tig0040438:7978-7997 | None:intergenic | 40.0% |
! | AGTGGGGTATTCTATTAAGG+AGG | + | tig0040438:7979-7998 | None:intergenic | 40.0% |
GTAGTGTAGTAGAAGAAGTG+GGG | + | tig0040438:7995-8014 | None:intergenic | 40.0% | |
CAGTAGTGTAGTAGAAGAAG+TGG | + | tig0040438:7997-8016 | None:intergenic | 40.0% | |
CACTTCTTCTACTACACTAC+TGG | - | tig0040438:7995-8014 | Msa1459760:CDS | 40.0% | |
!! | ATTCTAGGATGAAGAAGGTG+GGG | + | tig0040438:8044-8063 | None:intergenic | 40.0% |
TTCCCTATTCACAATTCTCC+AGG | - | tig0040438:8170-8189 | Msa1459760:CDS | 40.0% | |
CTTCATGATCGTCAAATTCC+TGG | + | tig0040438:8191-8210 | None:intergenic | 40.0% | |
GCATGGACATTGATGTTGAA+CGG | - | tig0040438:8241-8260 | Msa1459760:CDS | 40.0% | |
TGAATCTCAGCTCAATGATC+CGG | - | tig0040438:8381-8400 | Msa1459760:CDS | 40.0% | |
!! | CAATCCATAGTGGGCAAGAA+GGG | + | tig0040438:3541-3560 | None:intergenic | 45.0% |
GTGCTGAAGCAATCCATAGT+GGG | + | tig0040438:3550-3569 | None:intergenic | 45.0% | |
TGTGCTGAAGCAATCCATAG+TGG | + | tig0040438:3551-3570 | None:intergenic | 45.0% | |
CATCAGCATGAAAACGGCAA+AGG | + | tig0040438:3611-3630 | None:intergenic | 45.0% | |
CATAACCCCTGAAACACAAC+AGG | - | tig0040438:3653-3672 | Msa1459760:intron | 45.0% | |
GAGTATAGGCCATCAAAGAC+AGG | + | tig0040438:3723-3742 | None:intergenic | 45.0% | |
ACTTATGCTGGAGGTTCAGT+TGG | - | tig0040438:3753-3772 | Msa1459760:intron | 45.0% | |
! | GATATTGCTGTTAACTGGGC+TGG | - | tig0040438:3807-3826 | Msa1459760:intron | 45.0% |
CCTGTGAATGAGTTTCCAGA+AGG | + | tig0040438:4142-4161 | None:intergenic | 45.0% | |
! | CCTTCTGGAAACTCATTCAC+AGG | - | tig0040438:4139-4158 | Msa1459760:intron | 45.0% |
GAGAATGTTCAGCTGGGTAA+AGG | - | tig0040438:4484-4503 | Msa1459760:CDS | 45.0% | |
! | GCAATCATGTCAATGGTGGA+TGG | - | tig0040438:4918-4937 | Msa1459760:intron | 45.0% |
!! | CAATGGTGGATGGTGCAATA+TGG | - | tig0040438:4928-4947 | Msa1459760:intron | 45.0% |
TATCATGTGCGACAGCAATG+CGG | - | tig0040438:4974-4993 | Msa1459760:intron | 45.0% | |
!! | TCTTGACCTTGATGGTGATG+AGG | + | tig0040438:5148-5167 | None:intergenic | 45.0% |
AGTAAGGCAGAGGCGAAAAA+AGG | - | tig0040438:5249-5268 | Msa1459760:CDS | 45.0% | |
GTAAGGCAGAGGCGAAAAAA+GGG | - | tig0040438:5250-5269 | Msa1459760:CDS | 45.0% | |
GCGAAAAAAGGGACTGAAGA+AGG | - | tig0040438:5261-5280 | Msa1459760:CDS | 45.0% | |
AACAGAAGCAGGAAGAACAG+AGG | - | tig0040438:5337-5356 | Msa1459760:CDS | 45.0% | |
! | GTGACTGGCTGTCTGTATTA+TGG | + | tig0040438:5393-5412 | None:intergenic | 45.0% |
CGATGCTGCAACTTTCTTCT+AGG | - | tig0040438:5491-5510 | Msa1459760:intron | 45.0% | |
!!! | CTTCTAGGGTTTTCCATCAC+GGG | - | tig0040438:5506-5525 | Msa1459760:intron | 45.0% |
ATGAAAAGTTAGGCCCGTGA+TGG | + | tig0040438:5522-5541 | None:intergenic | 45.0% | |
! | ATCACGGGCCTAACTTTTCA+TGG | - | tig0040438:5521-5540 | Msa1459760:intron | 45.0% |
GAACCTGGCCATGAAAAGTT+AGG | + | tig0040438:5532-5551 | None:intergenic | 45.0% | |
ATGAAGAACCCTCCACTCTA+CGG | - | tig0040438:5675-5694 | Msa1459760:intron | 45.0% | |
AATTTCCACCGTAGAGTGGA+GGG | + | tig0040438:5686-5705 | None:intergenic | 45.0% | |
TAATTTCCACCGTAGAGTGG+AGG | + | tig0040438:5687-5706 | None:intergenic | 45.0% | |
AAGCCTGCTCTTAAAGCAGT+AGG | - | tig0040438:6053-6072 | Msa1459760:intron | 45.0% | |
GTGGACATTGATATCCACCA+TGG | - | tig0040438:6396-6415 | Msa1459760:CDS | 45.0% | |
TCATCAATGCCGTCATCAAG+TGG | + | tig0040438:6561-6580 | None:intergenic | 45.0% | |
ATAAAGAGTCTGCACCACAC+TGG | + | tig0040438:6659-6678 | None:intergenic | 45.0% | |
TGTGGTGCAGACTCTTTATC+TGG | - | tig0040438:6660-6679 | Msa1459760:intron | 45.0% | |
CAGACTCTTTATCTGGAGAC+AGG | - | tig0040438:6667-6686 | Msa1459760:intron | 45.0% | |
CTCTTTATCTGGAGACAGGT+TGG | - | tig0040438:6671-6690 | Msa1459760:intron | 45.0% | |
AATGTTCCCCTCTTGCTACT+AGG | - | tig0040438:6753-6772 | Msa1459760:intron | 45.0% | |
ACACCATTCGGAATGTTGCT+CGG | - | tig0040438:6787-6806 | Msa1459760:intron | 45.0% | |
!!! | ATGTTTTGGCACTCTGACAG+AGG | + | tig0040438:6908-6927 | None:intergenic | 45.0% |
! | GGCTATTTGTTAAGGCAGAC+GGG | - | tig0040438:7245-7264 | Msa1459760:intron | 45.0% |
GTTACTTGGGGCAACATGAA+GGG | + | tig0040438:7345-7364 | None:intergenic | 45.0% | |
! | TGTTACTTGGGGCAACATGA+AGG | + | tig0040438:7346-7365 | None:intergenic | 45.0% |
TCATGTTGCCCCAAGTAACA+TGG | - | tig0040438:7346-7365 | Msa1459760:intron | 45.0% | |
TGCTCCCAGTGTTCAATTTC+AGG | - | tig0040438:7442-7461 | Msa1459760:intron | 45.0% | |
TCTCCAAGATCAGAATCAGG+AGG | + | tig0040438:7473-7492 | None:intergenic | 45.0% | |
TCCTGATTCTGATCTTGGAG+AGG | - | tig0040438:7472-7491 | Msa1459760:intron | 45.0% | |
ACCTCTCCAAGATCAGAATC+AGG | + | tig0040438:7476-7495 | None:intergenic | 45.0% | |
GTACCCACTACCCACATATA+GGG | - | tig0040438:7764-7783 | Msa1459760:intron | 45.0% | |
GAATCCCTATATGTGGGTAG+TGG | + | tig0040438:7771-7790 | None:intergenic | 45.0% | |
ATCGCATTGCACCTGAGTAT+AGG | + | tig0040438:7918-7937 | None:intergenic | 45.0% | |
TCAATGTCCATGCCAGAATC+TGG | + | tig0040438:8234-8253 | None:intergenic | 45.0% | |
!!! | TTTTGAATTTATAATATTTT+TGG | - | tig0040438:5576-5595 | Msa1459760:intron | 5.0% |
TTCCGTCTTCTGCACCTGAT+GGG | - | tig0040438:3415-3434 | Msa1459760:CDS | 50.0% | |
CGGATACGATGTGGCTTCAT+GGG | + | tig0040438:3507-3526 | None:intergenic | 50.0% | |
TGTGTCATGCGGATACGATG+TGG | + | tig0040438:3516-3535 | None:intergenic | 50.0% | |
! | CAAGAAGGGCATGTGTCATG+CGG | + | tig0040438:3527-3546 | None:intergenic | 50.0% |
!! | GCAATCCATAGTGGGCAAGA+AGG | + | tig0040438:3542-3561 | None:intergenic | 50.0% |
TGGATTGCTTCAGCACATGC+AGG | - | tig0040438:3554-3573 | Msa1459760:CDS | 50.0% | |
CTCTAGCAGGAAAAGGCTTG+TGG | + | tig0040438:3581-3600 | None:intergenic | 50.0% | |
! | AGCCTTTTCCTGCTAGAGAC+AGG | - | tig0040438:3583-3602 | Msa1459760:CDS | 50.0% |
! | GCCTTTTCCTGCTAGAGACA+GGG | - | tig0040438:3584-3603 | Msa1459760:CDS | 50.0% |
TCCCTGTCTCTAGCAGGAAA+AGG | + | tig0040438:3588-3607 | None:intergenic | 50.0% | |
TATGCTGGAGGTTCAGTTGG+TGG | - | tig0040438:3756-3775 | Msa1459760:intron | 50.0% | |
! | ATTGCTGTTAACTGGGCTGG+TGG | - | tig0040438:3810-3829 | Msa1459760:intron | 50.0% |
! | GCATCATGCCAAGAAGTGTG+AGG | - | tig0040438:3836-3855 | Msa1459760:intron | 50.0% |
TCCAGAAGCCTCACACTTCT+TGG | + | tig0040438:3847-3866 | None:intergenic | 50.0% | |
TGACAACATGGCACGCTTTC+TGG | - | tig0040438:4454-4473 | Msa1459760:CDS | 50.0% | |
!! | TGGCACGCTTTCTGGTTTCT+AGG | - | tig0040438:4462-4481 | Msa1459760:CDS | 50.0% |
ATGCGGCTATGAAGGAAGCA+TGG | - | tig0040438:4991-5010 | Msa1459760:intron | 50.0% | |
AGAAGCAGGAAGAACAGAGG+AGG | - | tig0040438:5340-5359 | Msa1459760:CDS | 50.0% | |
ATACAGCAACCACCCAGTTC+TGG | + | tig0040438:5369-5388 | None:intergenic | 50.0% | |
CATAGCAGCCACCATTCACT+GGG | + | tig0040438:5648-5667 | None:intergenic | 50.0% | |
AGTGGAGGGTTCTTCATGGA+GGG | + | tig0040438:5672-5691 | None:intergenic | 50.0% | |
GTAGAGTGGAGGGTTCTTCA+TGG | + | tig0040438:5676-5695 | None:intergenic | 50.0% | |
AGTACTGCAGTCGCAGATGT+TGG | + | tig0040438:5953-5972 | None:intergenic | 50.0% | |
TATCCACCATGGAGATGGTG+TGG | - | tig0040438:6407-6426 | Msa1459760:CDS | 50.0% | |
ACTGGCGACTTGCGTGATAT+TGG | - | tig0040438:6501-6520 | Msa1459760:intron | 50.0% | |
ACACTGGAGAACAACTGCAC+CGG | + | tig0040438:6643-6662 | None:intergenic | 50.0% | |
ACACCGAGCAACATTCCGAA+TGG | + | tig0040438:6793-6812 | None:intergenic | 50.0% | |
!! | TTCGGAATGTTGCTCGGTGT+TGG | - | tig0040438:6793-6812 | Msa1459760:intron | 50.0% |
AGGCCTCCTGATTCTGATCT+TGG | - | tig0040438:7467-7486 | Msa1459760:intron | 50.0% | |
GGTACCCACTACCCACATAT+AGG | - | tig0040438:7763-7782 | Msa1459760:intron | 50.0% | |
!! | GAGCATTGGGATCCAGATTC+TGG | - | tig0040438:8219-8238 | Msa1459760:CDS | 50.0% |
TTGGGATCCAGATTCTGGCA+TGG | - | tig0040438:8224-8243 | Msa1459760:CDS | 50.0% | |
CTTCCGTCTTCTGCACCTGA+TGG | - | tig0040438:3414-3433 | Msa1459760:CDS | 55.0% | |
TCCGTCTTCTGCACCTGATG+GGG | - | tig0040438:3416-3435 | Msa1459760:CDS | 55.0% | |
ACCCCATCAGGTGCAGAAGA+CGG | + | tig0040438:3420-3439 | None:intergenic | 55.0% | |
GTGGCTTCATGGGATGACCT+TGG | + | tig0040438:3497-3516 | None:intergenic | 55.0% | |
GCGGATACGATGTGGCTTCA+TGG | + | tig0040438:3508-3527 | None:intergenic | 55.0% | |
CATGCCCTTCTTGCCCACTA+TGG | - | tig0040438:3534-3553 | Msa1459760:intron | 55.0% | |
CAAAGGTCCCTGTCTCTAGC+AGG | + | tig0040438:3594-3613 | None:intergenic | 55.0% | |
! | GCCAAGAAGTGTGAGGCTTC+TGG | - | tig0040438:3843-3862 | Msa1459760:intron | 55.0% |
CGACAGCAATGCGGCTATGA+AGG | - | tig0040438:4983-5002 | Msa1459760:intron | 55.0% | |
! | CGGCTATGAAGGAAGCATGG+TGG | - | tig0040438:4994-5013 | Msa1459760:CDS | 55.0% |
! | GGGCCTAACTTTTCATGGCC+AGG | - | tig0040438:5526-5545 | Msa1459760:intron | 55.0% |
CCATAGCAGCCACCATTCAC+TGG | + | tig0040438:5649-5668 | None:intergenic | 55.0% | |
CCAGTGAATGGTGGCTGCTA+TGG | - | tig0040438:5646-5665 | Msa1459760:intron | 55.0% | |
GAGTGGAGGGTTCTTCATGG+AGG | + | tig0040438:5673-5692 | None:intergenic | 55.0% | |
AAGAACCCTCCACTCTACGG+TGG | - | tig0040438:5678-5697 | Msa1459760:intron | 55.0% | |
CTTCCTCCACACCATCTCCA+TGG | + | tig0040438:6416-6435 | None:intergenic | 55.0% | |
CACTGGAGAACAACTGCACC+GGG | + | tig0040438:6642-6661 | None:intergenic | 55.0% | |
GGTGCAGTTGTTCTCCAGTG+TGG | - | tig0040438:6642-6661 | Msa1459760:intron | 55.0% | |
GTTCCCCTCTTGCTACTAGG+TGG | - | tig0040438:6756-6775 | Msa1459760:intron | 55.0% | |
CCACCACCTAGTAGCAAGAG+GGG | + | tig0040438:6762-6781 | None:intergenic | 55.0% | |
GCCACCACCTAGTAGCAAGA+GGG | + | tig0040438:6763-6782 | None:intergenic | 55.0% | |
! | CTCTTGCTACTAGGTGGTGG+CGG | - | tig0040438:6762-6781 | Msa1459760:intron | 55.0% |
!! | GTGGTGGCGGTTACACCATT+CGG | - | tig0040438:6775-6794 | Msa1459760:intron | 55.0% |
!! | TGCTCGGTGTTGGTGCTATG+AGG | - | tig0040438:6803-6822 | Msa1459760:intron | 55.0% |
GATGAAGAAGGTGGGGCCAA+AGG | + | tig0040438:8037-8056 | None:intergenic | 55.0% | |
GCACGAGGTTTGTCTAGCCG+TGG | - | tig0040438:3917-3936 | Msa1459760:intron | 60.0% | |
ACAGAGGAGGTCGCCAGAAC+TGG | - | tig0040438:5353-5372 | Msa1459760:CDS | 60.0% | |
CAGAGGAGGTCGCCAGAACT+GGG | - | tig0040438:5354-5373 | Msa1459760:CDS | 60.0% | |
CCAATGGGCAATGGCAGCCA+TGG | + | tig0040438:5614-5633 | None:intergenic | 60.0% | |
CCATGGCTGCCATTGCCCAT+TGG | - | tig0040438:5611-5630 | Msa1459760:intron | 60.0% | |
CAGCAGGCACCAATGGGCAA+TGG | + | tig0040438:5623-5642 | None:intergenic | 60.0% | |
CCTCCACACCATCTCCATGG+TGG | + | tig0040438:6413-6432 | None:intergenic | 60.0% | |
CCACCATGGAGATGGTGTGG+AGG | - | tig0040438:6410-6429 | Msa1459760:CDS | 60.0% | |
TCACGCAAGTCGCCAGTACC+AGG | + | tig0040438:6498-6517 | None:intergenic | 60.0% | |
CCCCTCTTGCTACTAGGTGG+TGG | - | tig0040438:6759-6778 | Msa1459760:intron | 60.0% | |
CGCCACCACCTAGTAGCAAG+AGG | + | tig0040438:6764-6783 | None:intergenic | 60.0% | |
GGCACTCTGACAGAGGTCTC+TGG | + | tig0040438:6901-6920 | None:intergenic | 60.0% | |
AGGCAGACGGGAGTTGCTCT+TGG | - | tig0040438:7257-7276 | Msa1459760:intron | 60.0% | |
AGGAGGTCGCCAGAACTGGG+TGG | - | tig0040438:5357-5376 | Msa1459760:CDS | 65.0% | |
TGGGCGCAGCAGGCACCAAT+GGG | + | tig0040438:5629-5648 | None:intergenic | 65.0% | |
TGCCTGCTGCGCCCAGTGAA+TGG | - | tig0040438:5634-5653 | Msa1459760:intron | 65.0% | |
CACCATTCACTGGGCGCAGC+AGG | + | tig0040438:5639-5658 | None:intergenic | 65.0% | |
CTGCTGCGCCCAGTGAATGG+TGG | - | tig0040438:5637-5656 | Msa1459760:intron | 65.0% | |
CTGGGCGCAGCAGGCACCAA+TGG | + | tig0040438:5630-5649 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0040438 | gene | 3393 | 8423 | 3393 | ID=Msa1459760;Name=Msa1459760 |
tig0040438 | mRNA | 3393 | 8423 | 3393 | ID=Msa1459760-mRNA-1;Parent=Msa1459760;Name=Msa1459760-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.4|0.16|1|1|1|6|0|515 |
tig0040438 | exon | 7893 | 8423 | 7893 | ID=Msa1459760-mRNA-1:exon:22423;Parent=Msa1459760-mRNA-1 |
tig0040438 | exon | 6303 | 6497 | 6303 | ID=Msa1459760-mRNA-1:exon:22422;Parent=Msa1459760-mRNA-1 |
tig0040438 | exon | 4992 | 5432 | 4992 | ID=Msa1459760-mRNA-1:exon:22421;Parent=Msa1459760-mRNA-1 |
tig0040438 | exon | 4323 | 4553 | 4323 | ID=Msa1459760-mRNA-1:exon:22420;Parent=Msa1459760-mRNA-1 |
tig0040438 | exon | 3554 | 3624 | 3554 | ID=Msa1459760-mRNA-1:exon:22419;Parent=Msa1459760-mRNA-1 |
tig0040438 | exon | 3393 | 3471 | 3393 | ID=Msa1459760-mRNA-1:exon:22418;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 7893 | 8423 | 7893 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 6303 | 6497 | 6303 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 4992 | 5432 | 4992 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 4323 | 4553 | 4323 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 3554 | 3624 | 3554 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
tig0040438 | CDS | 3393 | 3471 | 3393 | ID=Msa1459760-mRNA-1:cds;Parent=Msa1459760-mRNA-1 |
Gene Sequence |
Protein sequence |