Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125370 | XP_013468656.1 | 83.955 | 804 | 22 | 4 | 2 | 726 | 356 | 1131 | 0.0 | 1251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125370 | sp|A8MQL1|TRF1B_ARATH | 34.668 | 799 | 358 | 28 | 2 | 725 | 372 | 1081 | 2.51e-78 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125370 | A0A072VMM4 | 83.955 | 804 | 22 | 4 | 2 | 726 | 356 | 1131 | 0.0 | 1251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0125370 | 0.820143 | 8.013547e-53 | -8.615850e-47 |
| Msa0125370 | Msa0138970 | 0.804541 | 2.055845e-49 | -8.615850e-47 |
| Msa0125370 | Msa0156650 | 0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0125370 | Msa0167640 | 0.815428 | 9.292770e-52 | -8.615850e-47 |
| Msa0125370 | Msa0177700 | 0.827995 | 1.149767e-54 | -8.615850e-47 |
| Msa0125370 | Msa0178030 | 0.848266 | 6.839970e-60 | -8.615850e-47 |
| Msa0125370 | Msa0196020 | 0.878805 | 2.085932e-69 | -8.615850e-47 |
| Msa0125370 | Msa0275400 | 0.846651 | 1.899759e-59 | -8.615850e-47 |
| Msa0125370 | Msa0374250 | -0.814060 | 1.867574e-51 | -8.615850e-47 |
| Msa0125370 | Msa0377530 | -0.803006 | 4.283300e-49 | -8.615850e-47 |
| Msa0125370 | Msa0388030 | 0.809927 | 1.485785e-50 | -8.615850e-47 |
| Msa0125370 | Msa0394410 | 0.826059 | 3.339132e-54 | -8.615850e-47 |
| Msa0125370 | Msa0436280 | 0.820807 | 5.642994e-53 | -8.615850e-47 |
| Msa0125370 | Msa0437510 | -0.819060 | 1.416314e-52 | -8.615850e-47 |
| Msa0125370 | Msa0469790 | -0.811655 | 6.280134e-51 | -8.615850e-47 |
| Msa0125370 | Msa0469820 | -0.816691 | 4.854328e-52 | -8.615850e-47 |
| Msa0125370 | Msa0474590 | -0.816201 | 6.247286e-52 | -8.615850e-47 |
| Msa0125370 | Msa0517490 | -0.803175 | 3.950850e-49 | -8.615850e-47 |
| Msa0125370 | Msa0531990 | 0.839637 | 1.406528e-57 | -8.615850e-47 |
| Msa0125370 | Msa0532100 | 0.840339 | 9.231128e-58 | -8.615850e-47 |
| Msa0125370 | Msa0576100 | 0.808240 | 3.413075e-50 | -8.615850e-47 |
| Msa0125370 | Msa0586850 | -0.801811 | 7.550740e-49 | -8.615850e-47 |
| Msa0125370 | Msa0664760 | -0.811438 | 7.001010e-51 | -8.615850e-47 |
| Msa0125370 | Msa0743680 | -0.812754 | 3.616222e-51 | -8.615850e-47 |
| Msa0125370 | Msa0754720 | 0.813347 | 2.679883e-51 | -8.615850e-47 |
| Msa0125370 | Msa0784620 | -0.822037 | 2.934582e-53 | -8.615850e-47 |
| Msa0125370 | Msa0797080 | 0.807454 | 5.014712e-50 | -8.615850e-47 |
| Msa0125370 | Msa0860900 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
| Msa0125370 | Msa0863800 | -0.805865 | 1.086042e-49 | -8.615850e-47 |
| Msa0125370 | Msa0882440 | 0.808119 | 3.621628e-50 | -8.615850e-47 |
| Msa0125370 | Msa0930910 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0125370 | Msa0947530 | 0.843530 | 1.324017e-58 | -8.615850e-47 |
| Msa0125370 | Msa1069660 | 0.824837 | 6.499911e-54 | -8.615850e-47 |
| Msa0125370 | Msa1079370 | 0.831897 | 1.286749e-55 | -8.615850e-47 |
| Msa0125370 | Msa1211050 | 0.803482 | 3.413713e-49 | -8.615850e-47 |
| Msa0125370 | Msa1213020 | -0.806046 | 9.947574e-50 | -8.615850e-47 |
| Msa0125370 | Msa1236070 | 0.865076 | 7.676971e-65 | -8.615850e-47 |
| Msa0125370 | Msa1269580 | 0.827034 | 1.955172e-54 | -8.615850e-47 |
| Msa0125370 | Msa1300090 | -0.806874 | 6.655841e-50 | -8.615850e-47 |
| Msa0125370 | Msa1317810 | 0.808641 | 2.803443e-50 | -8.615850e-47 |
| Msa0125370 | Msa1360890 | 0.856588 | 2.906454e-62 | -8.615850e-47 |
| Msa0125370 | Msa1411400 | 0.857140 | 1.999355e-62 | -8.615850e-47 |
| Msa0125370 | Msa1429360 | 0.817143 | 3.841709e-52 | -8.615850e-47 |
| Msa0125370 | Msa1439890 | 0.843520 | 1.332250e-58 | -8.615850e-47 |
| Msa0125370 | Msa1442220 | 0.862062 | 6.612124e-64 | -8.615850e-47 |
| Msa0125370 | Msa1447110 | -0.860653 | 1.777511e-63 | -8.615850e-47 |
| Msa0125370 | Msa1449910 | -0.821315 | 4.309400e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125370 | MtrunA17_Chr1g0186411 | 83.955 | 804 | 22 | 4 | 2 | 726 | 356 | 1131 | 0.0 | 1251 |
| Msa0125370 | MtrunA17_Chr1g0168221 | 52.606 | 825 | 241 | 19 | 2 | 725 | 360 | 1135 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125370 | AT1G04300.6 | 34.625 | 800 | 357 | 29 | 2 | 725 | 110 | 819 | 2.67e-81 | 276 |
| Msa0125370 | AT1G04300.2 | 34.668 | 799 | 358 | 28 | 2 | 725 | 287 | 996 | 1.15e-79 | 275 |
| Msa0125370 | AT1G04300.3 | 34.668 | 799 | 358 | 28 | 2 | 725 | 372 | 1081 | 2.56e-79 | 275 |
| Msa0125370 | AT1G04300.4 | 34.668 | 799 | 358 | 28 | 2 | 725 | 345 | 1054 | 2.94e-79 | 274 |
| Msa0125370 | AT1G04300.1 | 34.668 | 799 | 358 | 28 | 2 | 725 | 364 | 1073 | 3.40e-79 | 275 |
| Msa0125370 | AT1G04300.5 | 34.668 | 799 | 358 | 28 | 2 | 725 | 334 | 1043 | 3.97e-79 | 274 |
| Msa0125370 | AT5G43560.2 | 76.316 | 76 | 18 | 0 | 2 | 77 | 365 | 440 | 1.63e-24 | 110 |
| Msa0125370 | AT5G43560.1 | 76.316 | 76 | 18 | 0 | 2 | 77 | 365 | 440 | 1.63e-24 | 110 |
Find 216 sgRNAs with CRISPR-Local
Find 731 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTACTCCTTTGGTTTC+TGG | 0.069611 | 1_3:+53868149 | Msa0125370:CDS |
| CATCAACACCATTGTCTTCT+TGG | 0.115326 | 1_3:-53866226 | None:intergenic |
| GAGTAATAATCTGGATAATA+TGG | 0.173668 | 1_3:-53869108 | None:intergenic |
| GAAAGGCGTCTCACAGAATT+AGG | 0.177263 | 1_3:+53861263 | Msa0125370:CDS |
| CAAAATTGAGGTTGCTTATC+AGG | 0.185875 | 1_3:+53862778 | Msa0125370:CDS |
| GAGATACTAGTCCTGTTAAT+TGG | 0.200866 | 1_3:+53866375 | Msa0125370:CDS |
| ATCTTGCAGTTGAAGTCTTC+TGG | 0.232219 | 1_3:-53868082 | None:intergenic |
| TCTGGTGCTGCAGCAGATGC+TGG | 0.245138 | 1_3:+53866784 | Msa0125370:CDS |
| TCCAGATTATTACTCAAATA+TGG | 0.260146 | 1_3:+53869116 | Msa0125370:CDS |
| AGTCTTCTGGATCTCAGTTT+TGG | 0.278484 | 1_3:-53868069 | None:intergenic |
| GTCTGAAAAGCCTGATACTA+TGG | 0.278933 | 1_3:+53866283 | Msa0125370:CDS |
| GCCACTACACAGTAGATCTA+TGG | 0.288138 | 1_3:+53868618 | Msa0125370:CDS |
| TTACGGTGTCACTTGATCTT+TGG | 0.290659 | 1_3:+53863934 | Msa0125370:CDS |
| AAAGACGGCCAGGGCAAGTT+TGG | 0.292974 | 1_3:+53868759 | Msa0125370:CDS |
| CAATGGTGTTGATGAGAAAA+TGG | 0.325729 | 1_3:+53866235 | Msa0125370:CDS |
| AATCGACAATTCAGCTTTCC+TGG | 0.326887 | 1_3:+53868817 | Msa0125370:CDS |
| GAGTTCCCAGCCTGCACATC+CGG | 0.327811 | 1_3:+53868655 | Msa0125370:CDS |
| CATTCTAGCTCGTCGTGTTC+AGG | 0.341949 | 1_3:+53868353 | Msa0125370:CDS |
| TTCTGATGTGTCTGACTCTC+TGG | 0.351361 | 1_3:+53866313 | Msa0125370:CDS |
| TTGTCCTTGCTCATATATTC+AGG | 0.360537 | 1_3:+53861306 | Msa0125370:CDS |
| TATGTCAATGGACAGGTTGA+TGG | 0.368319 | 1_3:+53869003 | Msa0125370:CDS |
| GCCATATTTGAGTAATAATC+TGG | 0.370173 | 1_3:-53869117 | None:intergenic |
| GGCCCTCAAATGGTTCTTAG+AGG | 0.372720 | 1_3:+53869169 | Msa0125370:CDS |
| GCCATGATGCCTCTTCTTCA+CGG | 0.372818 | 1_3:-53862835 | None:intergenic |
| CCAACTTCGTCTTTGATGTT+GGG | 0.376546 | 1_3:-53867831 | None:intergenic |
| CTGGTGCTGCAGCAGATGCT+GGG | 0.378446 | 1_3:+53866785 | Msa0125370:CDS |
| GAAATATCTTCCATAGTATC+AGG | 0.379484 | 1_3:-53866293 | None:intergenic |
| CCCAACTTCGTCTTTGATGT+TGG | 0.387162 | 1_3:-53867832 | None:intergenic |
| GATGTTTCATCCAGACAAAA+TGG | 0.387230 | 1_3:+53866455 | Msa0125370:CDS |
| GATCCTCGACCAGTTCTTGC+AGG | 0.388433 | 1_3:+53868866 | Msa0125370:CDS |
| CTCCTTTGGTTTCTGGTCCC+AGG | 0.389241 | 1_3:+53868156 | Msa0125370:CDS |
| AAGACCTTCAAGTACTCCTT+TGG | 0.390403 | 1_3:+53868142 | Msa0125370:CDS |
| TCAATGGTTATACTGTATTC+AGG | 0.393091 | 1_3:+53869148 | Msa0125370:CDS |
| GGGCTGATCATACATGCTTC+TGG | 0.393844 | 1_3:-53868557 | None:intergenic |
| AACTGCTCCTGTGGTCTCAA+TGG | 0.394649 | 1_3:+53868181 | Msa0125370:CDS |
| GTCCAGTGTGGTGTTCCCTT+TGG | 0.398637 | 1_3:+53868469 | Msa0125370:intron |
| TTTGAGAACTTTCAATCCAC+TGG | 0.401010 | 1_3:-53868525 | None:intergenic |
| ATGAGTGCAGCTGGCCGGTT+AGG | 0.409024 | 1_3:+53868233 | Msa0125370:CDS |
| AGTTACTGAAATGCTTCATC+TGG | 0.409769 | 1_3:+53866340 | Msa0125370:CDS |
| GGATTCGAGTGTCTGAGAAA+TGG | 0.410400 | 1_3:+53868781 | Msa0125370:CDS |
| AAAATAGATGGTCGGCCATC+TGG | 0.411364 | 1_3:+53866766 | Msa0125370:CDS |
| AGAATTAGGGCGTAGGACTT+TGG | 0.412085 | 1_3:+53861277 | Msa0125370:CDS |
| GCATCAGTATCCCAATTAAC+AGG | 0.413324 | 1_3:-53866386 | None:intergenic |
| AAGACGGCCAGGGCAAGTTT+GGG | 0.423917 | 1_3:+53868760 | Msa0125370:CDS |
| AAGGCATGCTAGTAACTTGC+GGG | 0.425884 | 1_3:-53868981 | None:intergenic |
| GGTTGGACAAATAAAATAGA+TGG | 0.426465 | 1_3:+53866754 | Msa0125370:CDS |
| CTGAACACGACGAGCTAGAA+TGG | 0.426492 | 1_3:-53868352 | None:intergenic |
| CAAAGTTACCATCATGATCA+TGG | 0.427845 | 1_3:+53868901 | Msa0125370:CDS |
| TAGTTCATGGCTGAACATTA+CGG | 0.429728 | 1_3:+53863917 | Msa0125370:intron |
| AGATACTAGTCCTGTTAATT+GGG | 0.435612 | 1_3:+53866376 | Msa0125370:CDS |
| ATCAAAATCATGACTTGTAC+AGG | 0.437256 | 1_3:+53868596 | Msa0125370:CDS |
| TTCCCTCTAAGAACCATTTG+AGG | 0.440624 | 1_3:-53869172 | None:intergenic |
| ACGCTCGAGCCTGCAAGAAC+TGG | 0.442802 | 1_3:-53868875 | None:intergenic |
| ATCCTACAGAAATGCTATCA+TGG | 0.445419 | 1_3:+53868295 | Msa0125370:CDS |
| ATTCAGCTTTCCTGGAGACT+TGG | 0.445504 | 1_3:+53868825 | Msa0125370:CDS |
| TGACGCCCGGATGTGCAGGC+TGG | 0.448831 | 1_3:-53868661 | None:intergenic |
| GGGGTTATTAACAAAGAGTC+TGG | 0.449839 | 1_3:+53866805 | Msa0125370:CDS |
| GACCCGTGGCCACCTGCCAT+TGG | 0.454994 | 1_3:-53869038 | None:intergenic |
| GAGGGAGGAGAGGACTACTA+TGG | 0.459574 | 1_3:+53866187 | Msa0125370:CDS |
| ATTCTGACGCCCGGATGTGC+AGG | 0.460390 | 1_3:-53868665 | None:intergenic |
| GACGCCCGGATGTGCAGGCT+GGG | 0.460434 | 1_3:-53868660 | None:intergenic |
| TGGATCTTTATCAGTCTGTT+GGG | 0.463001 | 1_3:-53868006 | None:intergenic |
| GTCACTAAAACATCTTCAAA+TGG | 0.466515 | 1_3:+53867981 | Msa0125370:CDS |
| GATTCGAGTGTCTGAGAAAT+GGG | 0.468823 | 1_3:+53868782 | Msa0125370:CDS |
| TGAGTGGCGGGTGAGGGATC+AGG | 0.470906 | 1_3:-53868257 | None:intergenic |
| TCCTACAGAAATGCTATCAT+GGG | 0.473286 | 1_3:+53868296 | Msa0125370:CDS |
| ATACTGTTGGAAAGACGGCC+AGG | 0.475970 | 1_3:+53868749 | Msa0125370:CDS |
| ATGGATCTTTATCAGTCTGT+TGG | 0.478053 | 1_3:-53868007 | None:intergenic |
| AAACCAATGGCAGGTGGCCA+CGG | 0.478223 | 1_3:+53869035 | Msa0125370:CDS |
| GTGAGGGATCAGGACCTAAC+CGG | 0.481848 | 1_3:-53868247 | None:intergenic |
| GCACGCTCAATGAGTGCAGC+TGG | 0.482026 | 1_3:+53868224 | Msa0125370:CDS |
| TCCCAGGCCAACTGCTCCTG+TGG | 0.483261 | 1_3:+53868172 | Msa0125370:CDS |
| AGTAAAGGACAAAGGGAGGG+AGG | 0.483426 | 1_3:+53866172 | Msa0125370:CDS |
| TTGTTACAAGCCTCAGTTGG+AGG | 0.484425 | 1_3:-53866422 | None:intergenic |
| CATCCAATGGGAAAAGCCTA+TGG | 0.492513 | 1_3:+53863983 | Msa0125370:CDS |
| GACCACAGGAGCAGTTGGCC+TGG | 0.492606 | 1_3:-53868174 | None:intergenic |
| CCCAACATCAAAGACGAAGT+TGG | 0.493887 | 1_3:+53867831 | Msa0125370:CDS |
| AAAGGCGTCTCACAGAATTA+GGG | 0.494724 | 1_3:+53861264 | Msa0125370:CDS |
| ATTTGACCAGGCGAGCTACT+AGG | 0.496816 | 1_3:-53867918 | None:intergenic |
| CCAACATCAAAGACGAAGTT+GGG | 0.497477 | 1_3:+53867832 | Msa0125370:CDS |
| ACTAGCATGCCTTATGTCAA+TGG | 0.497740 | 1_3:+53868991 | Msa0125370:CDS |
| AACTTGTGAGGCAGAGGTGA+AGG | 0.498028 | 1_3:-53868036 | None:intergenic |
| CAATGTGACAACAGCACCCT+CGG | 0.499530 | 1_3:-53866854 | None:intergenic |
| AGTAATAATCTGGATAATAT+GGG | 0.500186 | 1_3:-53869107 | None:intergenic |
| ATGACTATGAGTGGCGGGTG+AGG | 0.500405 | 1_3:-53868264 | None:intergenic |
| TCCCTCTAAGAACCATTTGA+GGG | 0.506141 | 1_3:-53869171 | None:intergenic |
| ATAAGAAAGTAAAGGACAAA+GGG | 0.506925 | 1_3:+53866165 | Msa0125370:CDS |
| ATGCCTGCATACAATAGATC+AGG | 0.507001 | 1_3:-53869060 | None:intergenic |
| ACTGTATTCAGGCCCTCAAA+TGG | 0.507598 | 1_3:+53869159 | Msa0125370:CDS |
| ACCACAGGAGCAGTTGGCCT+GGG | 0.507928 | 1_3:-53868173 | None:intergenic |
| GAGTCTGGAAGTGGAAAGGC+TGG | 0.509160 | 1_3:+53866820 | Msa0125370:CDS |
| AAAAGAAGGCAAAGAAAAGC+AGG | 0.510688 | 1_3:+53862903 | Msa0125370:CDS |
| GCTCAATGAGTGCAGCTGGC+CGG | 0.512291 | 1_3:+53868228 | Msa0125370:CDS |
| CTCGAATCCCAAACTTGCCC+TGG | 0.513071 | 1_3:-53868767 | None:intergenic |
| CTTGAAGGTCTTGAGATAGT+AGG | 0.514525 | 1_3:-53868131 | None:intergenic |
| AACCAATGGCAGGTGGCCAC+GGG | 0.514614 | 1_3:+53869036 | Msa0125370:CDS |
| TGAAAGTTCTCAAAGAGAAT+CGG | 0.514881 | 1_3:+53868534 | Msa0125370:CDS |
| CATTGAAGGATCGGTTAAAG+TGG | 0.517473 | 1_3:+53866872 | Msa0125370:CDS |
| GGGTGCTGTTGTCACATTGA+AGG | 0.520228 | 1_3:+53866858 | Msa0125370:CDS |
| GAAACCAAAGGAGTACTTGA+AGG | 0.521160 | 1_3:-53868146 | None:intergenic |
| AGGACAAAGGGAGGGAGGAG+AGG | 0.522174 | 1_3:+53866177 | Msa0125370:CDS |
| AGAAAGTAAAGGACAAAGGG+AGG | 0.524463 | 1_3:+53866168 | Msa0125370:CDS |
| TCCTGTGTTCTCAAGCCAAA+GGG | 0.526908 | 1_3:-53868484 | None:intergenic |
| TCAACCTGTCCATTGACATA+AGG | 0.527082 | 1_3:-53869000 | None:intergenic |
| ATAGCATTTCTGTAGGATTG+AGG | 0.527510 | 1_3:-53868290 | None:intergenic |
| CCTTTGTTACAAGCCTCAGT+TGG | 0.529254 | 1_3:-53866425 | None:intergenic |
| AGTCCTCCTAGTAGCTCGCC+TGG | 0.531867 | 1_3:+53867912 | Msa0125370:CDS |
| GGTCAGACTGGCAGCAGTTG+AGG | 0.532385 | 1_3:-53868330 | None:intergenic |
| TGAACACGACGAGCTAGAAT+GGG | 0.532573 | 1_3:-53868351 | None:intergenic |
| TCATTTGCATCCAAGTCTCC+AGG | 0.537872 | 1_3:-53868835 | None:intergenic |
| ACTTGTGAGGCAGAGGTGAA+GGG | 0.538062 | 1_3:-53868035 | None:intergenic |
| ATTAACAAAGAGTCTGGAAG+TGG | 0.538116 | 1_3:+53866811 | Msa0125370:CDS |
| AATTGTCGATTTAGCGATTG+CGG | 0.539861 | 1_3:-53868805 | None:intergenic |
| CTTGATGATGAGCATACTGT+TGG | 0.540637 | 1_3:+53868736 | Msa0125370:CDS |
| TGAGAAAATGGATTCTAATG+AGG | 0.543439 | 1_3:+53866247 | Msa0125370:CDS |
| CAAAACGTGGAGTCAATGAG+AGG | 0.543462 | 1_3:+53862879 | Msa0125370:CDS |
| GCGGAACAATAAGAAAGTAA+AGG | 0.545734 | 1_3:+53866157 | Msa0125370:CDS |
| CCAACTGAGGCTTGTAACAA+AGG | 0.549993 | 1_3:+53866425 | Msa0125370:CDS |
| GCAGGTCGTTTATGATATCA+AGG | 0.551574 | 1_3:-53868714 | None:intergenic |
| GCACTCATTGAGCGTGCAAG+TGG | 0.551953 | 1_3:-53868218 | None:intergenic |
| GCATCTGCTGCAGCACCAGA+TGG | 0.552255 | 1_3:-53866781 | None:intergenic |
| CTTGTGAGGCAGAGGTGAAG+GGG | 0.554636 | 1_3:-53868034 | None:intergenic |
| ATTCTATTGAGCGCGATGAA+AGG | 0.555828 | 1_3:+53861246 | Msa0125370:CDS |
| CCCATAGATCTACTGTGTAG+TGG | 0.556253 | 1_3:-53868619 | None:intergenic |
| TGTAACCGATTCCATCCAAT+GGG | 0.557359 | 1_3:+53863971 | Msa0125370:CDS |
| TGAGAAGCATGTTGTCAGAA+AGG | 0.558629 | 1_3:+53866897 | Msa0125370:CDS |
| AGTTCCCAGCCTGCACATCC+GGG | 0.558647 | 1_3:+53868656 | Msa0125370:CDS |
| TGACTATGAGTGGCGGGTGA+GGG | 0.560104 | 1_3:-53868263 | None:intergenic |
| CTGTTGTCACATTGAAGGAT+CGG | 0.560558 | 1_3:+53866863 | Msa0125370:CDS |
| GGAGGACTGACAGGTGAAGA+TGG | 0.561089 | 1_3:-53867897 | None:intergenic |
| GGTCCTGATCTATTGTATGC+AGG | 0.561180 | 1_3:+53869057 | Msa0125370:CDS |
| CCCCATGATAGCATTTCTGT+AGG | 0.562524 | 1_3:-53868297 | None:intergenic |
| ATGTAACCGATTCCATCCAA+TGG | 0.562827 | 1_3:+53863970 | Msa0125370:CDS |
| CCACTACACAGTAGATCTAT+GGG | 0.562933 | 1_3:+53868619 | Msa0125370:CDS |
| ATGGATTGATTACAAACCAA+TGG | 0.563373 | 1_3:+53869022 | Msa0125370:CDS |
| GATGTGTCTGACTCTCTGGA+TGG | 0.563518 | 1_3:+53866317 | Msa0125370:CDS |
| TGATCATCATTAAGACCAGC+GGG | 0.563699 | 1_3:-53868577 | None:intergenic |
| AGAACTCATCCGTGAAGAAG+AGG | 0.564259 | 1_3:+53862826 | Msa0125370:CDS |
| AATATGGCATGTGGTGTCAA+TGG | 0.568394 | 1_3:+53869132 | Msa0125370:CDS |
| TTGAGAACTTTCAATCCACT+GGG | 0.570075 | 1_3:-53868524 | None:intergenic |
| GCGTCAGAATCAAGCGTTGG+TGG | 0.570137 | 1_3:+53868678 | Msa0125370:CDS |
| ATCCTGTGTTCTCAAGCCAA+AGG | 0.572505 | 1_3:-53868485 | None:intergenic |
| CAGTATGCTCATCATCAAGC+AGG | 0.572675 | 1_3:-53868732 | None:intergenic |
| ATGATCATGGATTCCGAGGA+GGG | 0.574205 | 1_3:+53868914 | Msa0125370:CDS |
| TTGGATGGAATCGGTTACAT+AGG | 0.574566 | 1_3:-53863967 | None:intergenic |
| GAGCCTGCAAGAACTGGTCG+AGG | 0.574834 | 1_3:-53868869 | None:intergenic |
| AATAAGAAAGTAAAGGACAA+AGG | 0.576095 | 1_3:+53866164 | Msa0125370:CDS |
| AGTCAATGAGAGGGAAAAGA+AGG | 0.577856 | 1_3:+53862889 | Msa0125370:CDS |
| AGTTGTAACTTGTGAGGCAG+AGG | 0.578512 | 1_3:-53868042 | None:intergenic |
| AGGACTACTATGGCTGTGCA+TGG | 0.579965 | 1_3:+53866197 | Msa0125370:CDS |
| CAACGCTTGATTCTGACGCC+CGG | 0.579981 | 1_3:-53868674 | None:intergenic |
| TCCGTGAAGAAGAGGCATCA+TGG | 0.580342 | 1_3:+53862834 | Msa0125370:CDS |
| GAAAGTAAAGGACAAAGGGA+GGG | 0.580363 | 1_3:+53866169 | Msa0125370:CDS |
| CGAGCTAGAATGGGTCAGAC+TGG | 0.580946 | 1_3:-53868342 | None:intergenic |
| CTCGGAATCCATGATCATGA+TGG | 0.581744 | 1_3:-53868909 | None:intergenic |
| GAGCTACTAGGAGGACTGAC+AGG | 0.582819 | 1_3:-53867906 | None:intergenic |
| ATTGAGACCACAGGAGCAGT+TGG | 0.583534 | 1_3:-53868179 | None:intergenic |
| CATGCCTTATGTCAATGGAC+AGG | 0.583762 | 1_3:+53868996 | Msa0125370:CDS |
| TTGTTTACTAACATTTGACC+AGG | 0.584367 | 1_3:-53867930 | None:intergenic |
| CACTGCAGGCCAAACAAAAG+CGG | 0.584440 | 1_3:+53866138 | Msa0125370:intron |
| TGAGCATACTGTTGGAAAGA+CGG | 0.584991 | 1_3:+53868744 | Msa0125370:CDS |
| GTAGGATGTAAACTCTGGTG+AGG | 0.585371 | 1_3:+53861211 | Msa0125370:intron |
| TCCCTTTGGCTTGAGAACAC+AGG | 0.589775 | 1_3:+53868483 | Msa0125370:CDS |
| CGTTTATGATATCAAGGTGA+GGG | 0.589791 | 1_3:-53868708 | None:intergenic |
| TACTGTTGGAAAGACGGCCA+GGG | 0.590278 | 1_3:+53868750 | Msa0125370:CDS |
| CATCATGATCATGGATTCCG+AGG | 0.590749 | 1_3:+53868910 | Msa0125370:CDS |
| GGGATGAGCTATACCCTCCT+CGG | 0.592158 | 1_3:-53868927 | None:intergenic |
| TTGTGAGGCAGAGGTGAAGG+GGG | 0.592920 | 1_3:-53868033 | None:intergenic |
| TAAGTGAATCAAAATGCCCA+TGG | 0.592995 | 1_3:-53868948 | None:intergenic |
| GAGGCATCATGGCAAGCTGA+AGG | 0.593174 | 1_3:+53862845 | Msa0125370:CDS |
| TGGGTGCAGCAACAAAATTG+AGG | 0.593465 | 1_3:+53862766 | Msa0125370:intron |
| ATGAGAAACACAGAGAATGA+TGG | 0.594896 | 1_3:+53869081 | Msa0125370:CDS |
| GAGGCTTGTAACAAAGGCAT+AGG | 0.595450 | 1_3:+53866431 | Msa0125370:CDS |
| CAAAGAGTCTGGAAGTGGAA+AGG | 0.598106 | 1_3:+53866816 | Msa0125370:CDS |
| GTTTGAACCATTGAGACCAC+AGG | 0.598568 | 1_3:-53868188 | None:intergenic |
| ATTGATTACAAACCAATGGC+AGG | 0.603793 | 1_3:+53869026 | Msa0125370:CDS |
| GGAATCGGTTACATAGGTCA+AGG | 0.603819 | 1_3:-53863961 | None:intergenic |
| TGGTGCTGCAGCAGATGCTG+GGG | 0.604746 | 1_3:+53866786 | Msa0125370:CDS |
| GGCATAGCATCATGTGACAC+TGG | 0.604879 | 1_3:+53866730 | Msa0125370:CDS |
| GGACTACTATGGCTGTGCAT+GGG | 0.614534 | 1_3:+53866198 | Msa0125370:CDS |
| AGCATGTATGATCAGCCCGC+TGG | 0.618096 | 1_3:+53868562 | Msa0125370:CDS |
| GGAGGGTATAGCTCATCCCA+TGG | 0.622534 | 1_3:+53868931 | Msa0125370:CDS |
| GGAACATGACTATGAGTGGC+GGG | 0.622775 | 1_3:-53868269 | None:intergenic |
| ATTGAAGGATCGGTTAAAGT+GGG | 0.624959 | 1_3:+53866873 | Msa0125370:CDS |
| AGAAGTTCATCCTCCAACTG+AGG | 0.625395 | 1_3:+53866412 | Msa0125370:CDS |
| GGACGAAGTTGTAACTTGTG+AGG | 0.626603 | 1_3:-53868048 | None:intergenic |
| TAAGGCATGCTAGTAACTTG+CGG | 0.627695 | 1_3:-53868982 | None:intergenic |
| CATCATGTGACACTGGTGGT+TGG | 0.635922 | 1_3:+53866737 | Msa0125370:CDS |
| GAGGGTATAGCTCATCCCAT+GGG | 0.636469 | 1_3:+53868932 | Msa0125370:CDS |
| ATCTGTAGAGGTAAGAACAG+AGG | 0.637050 | 1_3:+53866709 | Msa0125370:intron |
| TTCTAATGGATAGGACGAGG+AGG | 0.637741 | 1_3:+53867788 | Msa0125370:intron |
| TATTACTCAAATATGGCATG+TGG | 0.638066 | 1_3:+53869123 | Msa0125370:CDS |
| GCTACCTGAATATATGAGCA+AGG | 0.638259 | 1_3:-53861310 | None:intergenic |
| CGGGCGTCAGAATCAAGCGT+TGG | 0.638590 | 1_3:+53868675 | Msa0125370:CDS |
| TCAACTGCAAGATTAACTGA+AGG | 0.641725 | 1_3:+53868092 | Msa0125370:CDS |
| TTGAGGAACATGACTATGAG+TGG | 0.642794 | 1_3:-53868273 | None:intergenic |
| TCGTTTATGATATCAAGGTG+AGG | 0.643699 | 1_3:-53868709 | None:intergenic |
| AAGTGAATCAAAATGCCCAT+GGG | 0.643942 | 1_3:-53868947 | None:intergenic |
| AAAACGTGGAGTCAATGAGA+GGG | 0.644020 | 1_3:+53862880 | Msa0125370:CDS |
| GGACAAATAAAATAGATGGT+CGG | 0.644190 | 1_3:+53866758 | Msa0125370:CDS |
| TTGATCATCATTAAGACCAG+CGG | 0.647464 | 1_3:-53868578 | None:intergenic |
| GAATCGGTTACATAGGTCAA+GGG | 0.652558 | 1_3:-53863960 | None:intergenic |
| GTCTCACAGAATTAGGGCGT+AGG | 0.653502 | 1_3:+53861270 | Msa0125370:CDS |
| CATGATCATGGATTCCGAGG+AGG | 0.654764 | 1_3:+53868913 | Msa0125370:CDS |
| AAGAACTGGTCGAGGATCCG+CGG | 0.659961 | 1_3:-53868861 | None:intergenic |
| GATTACAAACCAATGGCAGG+TGG | 0.661607 | 1_3:+53869029 | Msa0125370:CDS |
| TGTGAGGCAGAGGTGAAGGG+GGG | 0.668170 | 1_3:-53868032 | None:intergenic |
| CCTACAGAAATGCTATCATG+GGG | 0.685666 | 1_3:+53868297 | Msa0125370:CDS |
| TGACCAGGCGAGCTACTAGG+AGG | 0.690611 | 1_3:-53867915 | None:intergenic |
| GGTGATCAGAAAACAAAACG+TGG | 0.704649 | 1_3:+53862866 | Msa0125370:CDS |
| GGGACGAACCAAGAAGACAA+TGG | 0.707405 | 1_3:+53866218 | Msa0125370:CDS |
| TTGGATGCAAATGATGACCG+CGG | 0.707428 | 1_3:+53868844 | Msa0125370:CDS |
| AGGAACATGACTATGAGTGG+CGG | 0.716164 | 1_3:-53868270 | None:intergenic |
| ATACAATAGATCAGGACCCG+TGG | 0.724953 | 1_3:-53869052 | None:intergenic |
| GGCCTGGGACCAGAAACCAA+AGG | 0.729032 | 1_3:-53868158 | None:intergenic |
| ATAGCATCATGTGACACTGG+TGG | 0.779232 | 1_3:+53866733 | Msa0125370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATACACATAT+AGG | + | chr1_3:53860466-53860485 | Msa0125370:intron | 10.0% |
| !! | TTTATACAAATAATGTAATT+TGG | - | chr1_3:53860564-53860583 | None:intergenic | 10.0% |
| !! | TTTAGTAATTTGATAAAAAT+TGG | + | chr1_3:53860750-53860769 | Msa0125370:intron | 10.0% |
| !! | TAATTTATAATTTAATCAGT+TGG | + | chr1_3:53861467-53861486 | Msa0125370:intron | 10.0% |
| !! | TACAAAAAATTATTAAAGAA+AGG | + | chr1_3:53863136-53863155 | Msa0125370:intron | 10.0% |
| !! | ATAAAATAAGTAATAAACTA+AGG | + | chr1_3:53864582-53864601 | Msa0125370:intron | 10.0% |
| !!! | AAAATATAATTTTGAACTTT+TGG | + | chr1_3:53864706-53864725 | Msa0125370:intron | 10.0% |
| !!! | AATTTGATAAAAATTGGTTT+TGG | + | chr1_3:53860756-53860775 | Msa0125370:intron | 15.0% |
| !! | AGTGTATAAATAAACAATTA+AGG | - | chr1_3:53861386-53861405 | None:intergenic | 15.0% |
| !! | CTGATTAAATTATAAATTAG+TGG | - | chr1_3:53861466-53861485 | None:intergenic | 15.0% |
| !!! | TTCTAAAATATTAAAGTACA+TGG | - | chr1_3:53861629-53861648 | None:intergenic | 15.0% |
| !!! | CAAATTCATTTTTATAAAAC+CGG | - | chr1_3:53862099-53862118 | None:intergenic | 15.0% |
| !! | CTTACATGTATATAATATTT+GGG | + | chr1_3:53862430-53862449 | Msa0125370:intron | 15.0% |
| !! | TGATCTTTATATCTATATAT+TGG | + | chr1_3:53862705-53862724 | Msa0125370:intron | 15.0% |
| !!! | TCTTTAATAATTTTTTGTAC+CGG | - | chr1_3:53863135-53863154 | None:intergenic | 15.0% |
| !! | CCAATTAAAATTTAATGATA+TGG | - | chr1_3:53863894-53863913 | None:intergenic | 15.0% |
| !!! | CCATATCATTAAATTTTAAT+TGG | + | chr1_3:53863891-53863910 | Msa0125370:intron | 15.0% |
| !!! | TTAAATTTTCTTGTTCAAAA+AGG | - | chr1_3:53864099-53864118 | None:intergenic | 15.0% |
| !! | AAACAAAAAATTTATGGATA+AGG | - | chr1_3:53864676-53864695 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTTTTTATGGTC+AGG | + | chr1_3:53865252-53865271 | Msa0125370:intron | 15.0% |
| !! | ATTTCACTCTTTATATATAT+TGG | + | chr1_3:53865464-53865483 | Msa0125370:intron | 15.0% |
| !! | TTTCACTCTTTATATATATT+GGG | + | chr1_3:53865465-53865484 | Msa0125370:intron | 15.0% |
| !! | TTAAAAAAATATATCGCTAT+GGG | - | chr1_3:53865496-53865515 | None:intergenic | 15.0% |
| !! | TGTATATTTAGTATTAATCT+GGG | - | chr1_3:53865522-53865541 | None:intergenic | 15.0% |
| !! | ATGTATATTTAGTATTAATC+TGG | - | chr1_3:53865523-53865542 | None:intergenic | 15.0% |
| !! | AAAGTATATTATTAACTAAG+GGG | - | chr1_3:53865566-53865585 | None:intergenic | 15.0% |
| !!! | GAAAGTATATTATTAACTAA+GGG | - | chr1_3:53865567-53865586 | None:intergenic | 15.0% |
| !!! | AGAAAGTATATTATTAACTA+AGG | - | chr1_3:53865568-53865587 | None:intergenic | 15.0% |
| !! | AAATACAATATCAGATATTA+GGG | - | chr1_3:53865926-53865945 | None:intergenic | 15.0% |
| !! | TAAATACAATATCAGATATT+AGG | - | chr1_3:53865927-53865946 | None:intergenic | 15.0% |
| !! | GGACAAAAATATTATAATTT+AGG | + | chr1_3:53865959-53865978 | Msa0125370:intron | 15.0% |
| !!! | CTTTTTTATCTTTTAAAAAG+AGG | - | chr1_3:53867307-53867326 | None:intergenic | 15.0% |
| !!! | CTCTTTTTAAAAGATAAAAA+AGG | + | chr1_3:53867305-53867324 | Msa0125370:intron | 15.0% |
| !! | CAAAAAATATGAATATAAGC+AGG | - | chr1_3:53860333-53860352 | None:intergenic | 20.0% |
| !! | ATATTCATATTCTGAATTAG+TGG | + | chr1_3:53860633-53860652 | Msa0125370:intron | 20.0% |
| !! | TATTCATATTCTGAATTAGT+GGG | + | chr1_3:53860634-53860653 | Msa0125370:intron | 20.0% |
| !! | AAAGAAAAGAAAAAGAAACA+CGG | - | chr1_3:53860945-53860964 | None:intergenic | 20.0% |
| !! | TGGTAGTTATAATAATATAC+CGG | - | chr1_3:53861108-53861127 | None:intergenic | 20.0% |
| !! | ATATTATTATAACTACCAAC+AGG | + | chr1_3:53861110-53861129 | Msa0125370:intron | 20.0% |
| !! | TATTATTATAACTACCAACA+GGG | + | chr1_3:53861111-53861130 | Msa0125370:intron | 20.0% |
| !! | AATTACAAAAAACTAGTGTA+TGG | - | chr1_3:53861342-53861361 | None:intergenic | 20.0% |
| !!! | TCAAATTGCAAGATTTTATT+TGG | + | chr1_3:53861586-53861605 | Msa0125370:intron | 20.0% |
| !!! | GATCTTTCATTTTTTATTTG+AGG | + | chr1_3:53861680-53861699 | Msa0125370:intron | 20.0% |
| !! | ACTCTTTATAAACTTATTTC+AGG | - | chr1_3:53861853-53861872 | None:intergenic | 20.0% |
| !! | TGAAATAAGTTTATAAAGAG+TGG | + | chr1_3:53861852-53861871 | Msa0125370:intron | 20.0% |
| !! | AGCTATTAGATGATTATATT+GGG | - | chr1_3:53862123-53862142 | None:intergenic | 20.0% |
| !! | CATGAATAAGTAAATCTATT+TGG | + | chr1_3:53862243-53862262 | Msa0125370:intron | 20.0% |
| !! | GCTTACATGTATATAATATT+TGG | + | chr1_3:53862429-53862448 | Msa0125370:intron | 20.0% |
| !!! | ATACATTTAAAATGTATGCA+AGG | - | chr1_3:53862461-53862480 | None:intergenic | 20.0% |
| !! | ATCACAAATAAAAAAATGTG+TGG | - | chr1_3:53862689-53862708 | None:intergenic | 20.0% |
| !! | ATATCTATATATTGGATTCA+CGG | + | chr1_3:53862713-53862732 | Msa0125370:intron | 20.0% |
| !!! | TTATTAAAGAAAGGTGTTAT+AGG | + | chr1_3:53863145-53863164 | Msa0125370:intron | 20.0% |
| !! | TGTGTTAAGATATATGTTAT+TGG | + | chr1_3:53863453-53863472 | Msa0125370:intron | 20.0% |
| !!! | AATTTTACATTATTGGTTTG+AGG | + | chr1_3:53863790-53863809 | Msa0125370:intron | 20.0% |
| !!! | TTTTAATTGGATTTAGTTCA+TGG | + | chr1_3:53863904-53863923 | Msa0125370:intron | 20.0% |
| !! | TCAAATATAATGCAATTTCT+AGG | - | chr1_3:53864218-53864237 | None:intergenic | 20.0% |
| !! | AATTCATTTATTAAGACATC+TGG | - | chr1_3:53864519-53864538 | None:intergenic | 20.0% |
| !!! | ATTTTGAAAAACAATGATAG+CGG | + | chr1_3:53864536-53864555 | Msa0125370:intron | 20.0% |
| !!! | ATTTGAGTCTTTGATATTTT+AGG | - | chr1_3:53864609-53864628 | None:intergenic | 20.0% |
| !! | CAAGTCAAACAAAAAATTTA+TGG | - | chr1_3:53864682-53864701 | None:intergenic | 20.0% |
| !! | CTTAAAAAAATATATCGCTA+TGG | - | chr1_3:53865497-53865516 | None:intergenic | 20.0% |
| !! | AAGTATATTATTAACTAAGG+GGG | - | chr1_3:53865565-53865584 | None:intergenic | 20.0% |
| !! | TACTCAAATTTGTAGTTAAT+CGG | + | chr1_3:53865988-53866007 | Msa0125370:intron | 20.0% |
| !! | AAAATCTTGAAAGTAACAAT+TGG | - | chr1_3:53866029-53866048 | None:intergenic | 20.0% |
| !!! | GCTTAGTGTTATTTTTTTTT+TGG | + | chr1_3:53866632-53866651 | Msa0125370:intron | 20.0% |
| !!! | TATTTTTTTTTTGGTGTTGA+CGG | + | chr1_3:53866641-53866660 | Msa0125370:intron | 20.0% |
| !! | GATAAAAAAGGTCTTAAAAA+TGG | + | chr1_3:53867317-53867336 | Msa0125370:intron | 20.0% |
| !! | AGTAATAATCTGGATAATAT+GGG | - | chr1_3:53869110-53869129 | None:intergenic | 20.0% |
| ! | TGTTTGAAGAATAACAAGAA+AGG | + | chr1_3:53860411-53860430 | Msa0125370:intron | 25.0% |
| ! | TCTAATAATAAATGACAGCA+AGG | + | chr1_3:53860605-53860624 | Msa0125370:intron | 25.0% |
| ! | ATTCATATTCTGAATTAGTG+GGG | + | chr1_3:53860635-53860654 | Msa0125370:intron | 25.0% |
| ! | TTCATCCTGTAAACTAATAT+TGG | + | chr1_3:53860797-53860816 | Msa0125370:intron | 25.0% |
| ! | TCATCCTGTAAACTAATATT+GGG | + | chr1_3:53860798-53860817 | Msa0125370:intron | 25.0% |
| ! | ACTAATATTGGGTTCAAATA+TGG | + | chr1_3:53860809-53860828 | Msa0125370:intron | 25.0% |
| !! | TAAATATTCCCTTTTCAACA+TGG | + | chr1_3:53860907-53860926 | Msa0125370:intron | 25.0% |
| ! | AATTGAATCCATGTTGAAAA+GGG | - | chr1_3:53860918-53860937 | None:intergenic | 25.0% |
| ! | AAATTGAATCCATGTTGAAA+AGG | - | chr1_3:53860919-53860938 | None:intergenic | 25.0% |
| ! | TTTCAACATGGATTCAATTT+AGG | + | chr1_3:53860919-53860938 | Msa0125370:intron | 25.0% |
| ! | GGTAGTTATAATAATATACC+GGG | - | chr1_3:53861107-53861126 | None:intergenic | 25.0% |
| !!! | ATTTAATCAGTTGGTTTTGT+CGG | + | chr1_3:53861476-53861495 | Msa0125370:intron | 25.0% |
| !! | AATAACATCTGAAATCACAA+AGG | - | chr1_3:53861540-53861559 | None:intergenic | 25.0% |
| ! | CAATTTGAAAACAATGACAA+AGG | - | chr1_3:53861574-53861593 | None:intergenic | 25.0% |
| !!! | TTTTATTTGGCTGTTTCTTT+TGG | + | chr1_3:53861599-53861618 | Msa0125370:intron | 25.0% |
| ! | AAAATGAAAGATCTTGTACT+CGG | - | chr1_3:53861673-53861692 | None:intergenic | 25.0% |
| ! | CCATATTAGGTTTGTATAAT+GGG | - | chr1_3:53861920-53861939 | None:intergenic | 25.0% |
| ! | ACCATATTAGGTTTGTATAA+TGG | - | chr1_3:53861921-53861940 | None:intergenic | 25.0% |
| ! | ACTCTTTATAAACTCATTAC+AGG | - | chr1_3:53862060-53862079 | None:intergenic | 25.0% |
| ! | CAGCTATTAGATGATTATAT+TGG | - | chr1_3:53862124-53862143 | None:intergenic | 25.0% |
| ! | ATGTAGTGAAACAAAAAGTA+TGG | - | chr1_3:53862661-53862680 | None:intergenic | 25.0% |
| ! | AATCCTAATTCCTAATTTCA+TGG | + | chr1_3:53862746-53862765 | Msa0125370:intron | 25.0% |
| ! | ATCCTAATTCCTAATTTCAT+GGG | + | chr1_3:53862747-53862766 | Msa0125370:intron | 25.0% |
| ! | AGATTGAAATTGCATCATTA+AGG | + | chr1_3:53862935-53862954 | Msa0125370:intron | 25.0% |
| !! | ATGATTTTAGATGTCAATAG+AGG | + | chr1_3:53863084-53863103 | Msa0125370:intron | 25.0% |
| ! | AATCCATATAAGGACTAATT+TGG | - | chr1_3:53863563-53863582 | None:intergenic | 25.0% |
| ! | AAATTAGTCCTTATATGGAT+TGG | + | chr1_3:53863562-53863581 | Msa0125370:intron | 25.0% |
| ! | GTCAAAAAAGACTTATAGAT+TGG | - | chr1_3:53863691-53863710 | None:intergenic | 25.0% |
| !!! | TCTATAAGTCTTTTTTGACA+TGG | + | chr1_3:53863692-53863711 | Msa0125370:intron | 25.0% |
| !!! | CTAATTTTTTATGTGTACCA+TGG | + | chr1_3:53863730-53863749 | Msa0125370:intron | 25.0% |
| !! | GAAGTGGAATTTTACATTAT+TGG | + | chr1_3:53863783-53863802 | Msa0125370:intron | 25.0% |
| ! | AAGAGACTAATGAAAACTAT+AGG | + | chr1_3:53863868-53863887 | Msa0125370:intron | 25.0% |
| ! | ATATAAGCAAAATCCAAACA+TGG | - | chr1_3:53864030-53864049 | None:intergenic | 25.0% |
| !! | ATATAATGCAATTTCTAGGA+AGG | - | chr1_3:53864214-53864233 | None:intergenic | 25.0% |
| ! | TGTAACAAAATAGTTAAGGT+AGG | + | chr1_3:53864295-53864314 | Msa0125370:intron | 25.0% |
| ! | ACTAATTATAATATCTGCCT+AGG | + | chr1_3:53864394-53864413 | Msa0125370:intron | 25.0% |
| ! | CTTGAAAAACTTCTATGAAA+TGG | - | chr1_3:53864461-53864480 | None:intergenic | 25.0% |
| ! | GTAACAATTGGATTGAAAAA+TGG | - | chr1_3:53866017-53866036 | None:intergenic | 25.0% |
| !!! | TTGATTTTCATTTTAGTTGC+TGG | + | chr1_3:53866097-53866116 | Msa0125370:intron | 25.0% |
| ! | AATAAGAAAGTAAAGGACAA+AGG | + | chr1_3:53866164-53866183 | Msa0125370:CDS | 25.0% |
| ! | ATAAGAAAGTAAAGGACAAA+GGG | + | chr1_3:53866165-53866184 | Msa0125370:CDS | 25.0% |
| ! | AATGGAATAATGTCTGATAA+AGG | + | chr1_3:53866473-53866492 | Msa0125370:intron | 25.0% |
| !!! | ATTTTTTTTTTGGTGTTGAC+GGG | + | chr1_3:53866642-53866661 | Msa0125370:intron | 25.0% |
| !!! | TCAGAAGTGTTATTTTGATT+TGG | + | chr1_3:53866678-53866697 | Msa0125370:intron | 25.0% |
| ! | TTTCCAATAAGAGTAGAAAT+GGG | - | chr1_3:53866927-53866946 | None:intergenic | 25.0% |
| ! | ATTTCCAATAAGAGTAGAAA+TGG | - | chr1_3:53866928-53866947 | None:intergenic | 25.0% |
| ! | GTTCAAAAAAAAAACTTCTC+CGG | + | chr1_3:53866960-53866979 | Msa0125370:intron | 25.0% |
| ! | AGAAATAAATACAGACAGAA+AGG | - | chr1_3:53867026-53867045 | None:intergenic | 25.0% |
| ! | AGAAACAGGAAAAATTGTTT+GGG | - | chr1_3:53867095-53867114 | None:intergenic | 25.0% |
| ! | AAGAAACAGGAAAAATTGTT+TGG | - | chr1_3:53867096-53867115 | None:intergenic | 25.0% |
| ! | CTAAATTGTGAAAAAGAAAC+AGG | - | chr1_3:53867109-53867128 | None:intergenic | 25.0% |
| !!! | CTGTTTCTTTTTCACAATTT+AGG | + | chr1_3:53867107-53867126 | Msa0125370:intron | 25.0% |
| !!! | TTTCTTTTTCACAATTTAGG+AGG | + | chr1_3:53867110-53867129 | Msa0125370:intron | 25.0% |
| !!! | CTTTGAGCAATTTTTAAAAG+AGG | + | chr1_3:53867149-53867168 | Msa0125370:intron | 25.0% |
| ! | AAAAAAGGTCTTAAAAATGG+AGG | + | chr1_3:53867320-53867339 | Msa0125370:intron | 25.0% |
| ! | AAAAAGGTCTTAAAAATGGA+GGG | + | chr1_3:53867321-53867340 | Msa0125370:intron | 25.0% |
| ! | TGAAGATGAATAGTAAACAA+GGG | - | chr1_3:53867367-53867386 | None:intergenic | 25.0% |
| ! | TTGAAGATGAATAGTAAACA+AGG | - | chr1_3:53867368-53867387 | None:intergenic | 25.0% |
| !! | AAACAACTCAGATTCTTTTT+GGG | - | chr1_3:53867541-53867560 | None:intergenic | 25.0% |
| !! | TAAACAACTCAGATTCTTTT+TGG | - | chr1_3:53867542-53867561 | None:intergenic | 25.0% |
| !!! | TGCTATTTGTGATTAGTTTA+AGG | + | chr1_3:53867627-53867646 | Msa0125370:intron | 25.0% |
| !!! | GCTATTTGTGATTAGTTTAA+GGG | + | chr1_3:53867628-53867647 | Msa0125370:intron | 25.0% |
| ! | ATCCTATTTATGAAGCTAAA+TGG | + | chr1_3:53867721-53867740 | Msa0125370:intron | 25.0% |
| !! | AACCATTTAGCTTCATAAAT+AGG | - | chr1_3:53867726-53867745 | None:intergenic | 25.0% |
| ! | AAAGATACAAGACTTTATAG+TGG | - | chr1_3:53867769-53867788 | None:intergenic | 25.0% |
| !!! | AAGTCTTGTATCTTTTCTAA+TGG | + | chr1_3:53867774-53867793 | Msa0125370:intron | 25.0% |
| !!! | TTGTATCTTTTCTAATGGAT+AGG | + | chr1_3:53867779-53867798 | Msa0125370:intron | 25.0% |
| ! | GAGTAATAATCTGGATAATA+TGG | - | chr1_3:53869111-53869130 | None:intergenic | 25.0% |
| ! | TCCAGATTATTACTCAAATA+TGG | + | chr1_3:53869116-53869135 | Msa0125370:CDS | 25.0% |
| TTCATATTCTGAATTAGTGG+GGG | + | chr1_3:53860636-53860655 | Msa0125370:intron | 30.0% | |
| !!! | ATAAAAATTGGTTTTGGCTG+TGG | + | chr1_3:53860762-53860781 | Msa0125370:intron | 30.0% |
| ! | TGAACCCAATATTAGTTTAC+AGG | - | chr1_3:53860805-53860824 | None:intergenic | 30.0% |
| AAGATAACATCTACGAGATA+TGG | - | chr1_3:53860974-53860993 | None:intergenic | 30.0% | |
| ATTTGCACATATTAGGTATC+TGG | + | chr1_3:53861064-53861083 | Msa0125370:intron | 30.0% | |
| GAATGTTATCTTCAATAACC+CGG | + | chr1_3:53861086-53861105 | Msa0125370:intron | 30.0% | |
| TCAATATGAACCCTTTCTAT+TGG | + | chr1_3:53861792-53861811 | Msa0125370:intron | 30.0% | |
| CAATATGAACCCTTTCTATT+GGG | + | chr1_3:53861793-53861812 | Msa0125370:intron | 30.0% | |
| CCCATTATACAAACCTAATA+TGG | + | chr1_3:53861917-53861936 | Msa0125370:intron | 30.0% | |
| TACAAACCTAATATGGTATC+AGG | + | chr1_3:53861924-53861943 | Msa0125370:intron | 30.0% | |
| TGTTGCATGGATATAAATTG+TGG | - | chr1_3:53861967-53861986 | None:intergenic | 30.0% | |
| TCTTTATTCTATGTGGAACT+GGG | - | chr1_3:53862032-53862051 | None:intergenic | 30.0% | |
| ATCTTTATTCTATGTGGAAC+TGG | - | chr1_3:53862033-53862052 | None:intergenic | 30.0% | |
| !! | TTCATTTTTATAAAACCGGC+TGG | - | chr1_3:53862095-53862114 | None:intergenic | 30.0% |
| TTCATGAGGATAAATCATCA+GGG | - | chr1_3:53862197-53862216 | None:intergenic | 30.0% | |
| TTTCATGAGGATAAATCATC+AGG | - | chr1_3:53862198-53862217 | None:intergenic | 30.0% | |
| CATATAATGAGTCCCTAATT+TGG | + | chr1_3:53862322-53862341 | Msa0125370:intron | 30.0% | |
| ! | AACTGATAATTTGTGATGTG+TGG | + | chr1_3:53862591-53862610 | Msa0125370:intron | 30.0% |
| GAAACCATTCTCATAAATTC+CGG | + | chr1_3:53863113-53863132 | Msa0125370:intron | 30.0% | |
| ATGGCTAAATTATCCGTATA+AGG | + | chr1_3:53863213-53863232 | Msa0125370:intron | 30.0% | |
| ! | AAAACTAGTTTAAGAGGTGA+AGG | - | chr1_3:53863247-53863266 | None:intergenic | 30.0% |
| !!! | CACCTCTTAAACTAGTTTTT+TGG | + | chr1_3:53863248-53863267 | Msa0125370:intron | 30.0% |
| ! | CTCCAAAAAACTAGTTTAAG+AGG | - | chr1_3:53863253-53863272 | None:intergenic | 30.0% |
| !!! | AAACTAGTTTTTTGGAGTTG+AGG | + | chr1_3:53863256-53863275 | Msa0125370:intron | 30.0% |
| ! | ATCTGAAGCATGTACAAATT+TGG | - | chr1_3:53863411-53863430 | None:intergenic | 30.0% |
| ! | TGCTTCAGATGTCTAATTTT+AGG | + | chr1_3:53863421-53863440 | Msa0125370:intron | 30.0% |
| ! | AGGATTTTCCAATCCATATA+AGG | - | chr1_3:53863573-53863592 | None:intergenic | 30.0% |
| !! | TTATATGGATTGGAAAATCC+TGG | + | chr1_3:53863572-53863591 | Msa0125370:intron | 30.0% |
| AATGATTGAGTAGATAGACT+TGG | + | chr1_3:53863656-53863675 | Msa0125370:intron | 30.0% | |
| !!! | TTGAGGAATACCTTTTTTTG+AGG | + | chr1_3:53863807-53863826 | Msa0125370:intron | 30.0% |
| ! | GCATGATTTGCCAATATTTA+TGG | + | chr1_3:53864145-53864164 | Msa0125370:intron | 30.0% |
| AGCAAGTCAACCATAAATAT+TGG | - | chr1_3:53864158-53864177 | None:intergenic | 30.0% | |
| !! | TTGACTTGCTTGTTTAAGAT+TGG | + | chr1_3:53864168-53864187 | Msa0125370:intron | 30.0% |
| GCACTGTAACAAAATAGTTA+AGG | + | chr1_3:53864291-53864310 | Msa0125370:intron | 30.0% | |
| TAAAGTGGAACATTGAAACT+TGG | + | chr1_3:53864322-53864341 | Msa0125370:intron | 30.0% | |
| AAAGTGGAACATTGAAACTT+GGG | + | chr1_3:53864323-53864342 | Msa0125370:intron | 30.0% | |
| ! | AATATCTGCCTAGGATTTTA+TGG | + | chr1_3:53864403-53864422 | Msa0125370:intron | 30.0% |
| CTTCTATGAAATGGATGTTT+AGG | - | chr1_3:53864452-53864471 | None:intergenic | 30.0% | |
| !! | TCATGTGAAATTAATGGACT+TGG | - | chr1_3:53864493-53864512 | None:intergenic | 30.0% |
| TGGTCATCATGTGAAATTAA+TGG | - | chr1_3:53864499-53864518 | None:intergenic | 30.0% | |
| TCAAATTACAATTCACCAAC+TGG | + | chr1_3:53864623-53864642 | Msa0125370:intron | 30.0% | |
| ! | TCAGACCTTTAAGAATGTAT+TGG | - | chr1_3:53864741-53864760 | None:intergenic | 30.0% |
| TGGTATTTATAGCCTGTTAT+GGG | - | chr1_3:53865110-53865129 | None:intergenic | 30.0% | |
| ACAGAAAGGAGAGAATAATT+AGG | + | chr1_3:53865434-53865453 | Msa0125370:intron | 30.0% | |
| CAGAAAGGAGAGAATAATTA+GGG | + | chr1_3:53865435-53865454 | Msa0125370:intron | 30.0% | |
| CTCTTTATATATATTGGGCT+AGG | + | chr1_3:53865470-53865489 | Msa0125370:intron | 30.0% | |
| ATTAGGGTTTAGTACTGTAT+TGG | - | chr1_3:53865910-53865929 | None:intergenic | 30.0% | |
| TTGTATTTATCGCAAGTACA+CGG | + | chr1_3:53865938-53865957 | Msa0125370:intron | 30.0% | |
| ! | ATTTTCCTATACATGGGAAA+AGG | + | chr1_3:53866063-53866082 | Msa0125370:intron | 30.0% |
| ! | TGAGAAAATGGATTCTAATG+AGG | + | chr1_3:53866247-53866266 | Msa0125370:CDS | 30.0% |
| GAAATATCTTCCATAGTATC+AGG | - | chr1_3:53866296-53866315 | None:intergenic | 30.0% | |
| AGATACTAGTCCTGTTAATT+GGG | + | chr1_3:53866376-53866395 | Msa0125370:CDS | 30.0% | |
| ! | AGACATTATTCCATTTTGTC+TGG | - | chr1_3:53866468-53866487 | None:intergenic | 30.0% |
| GGTTGGACAAATAAAATAGA+TGG | + | chr1_3:53866754-53866773 | Msa0125370:CDS | 30.0% | |
| GGACAAATAAAATAGATGGT+CGG | + | chr1_3:53866758-53866777 | Msa0125370:CDS | 30.0% | |
| CTCATTGGATGAAATTAATG+TGG | - | chr1_3:53867253-53867272 | None:intergenic | 30.0% | |
| CAAAAGAGTGGAATCAATTA+AGG | - | chr1_3:53867452-53867471 | None:intergenic | 30.0% | |
| AAATCTTTGTACATCTGTCT+AGG | - | chr1_3:53867487-53867506 | None:intergenic | 30.0% | |
| ! | AACAACTCAGATTCTTTTTG+GGG | - | chr1_3:53867540-53867559 | None:intergenic | 30.0% |
| ! | GGCTTGAATATTAAGGTTTT+TGG | + | chr1_3:53867654-53867673 | Msa0125370:intron | 30.0% |
| TTGTTTACTAACATTTGACC+AGG | - | chr1_3:53867933-53867952 | None:intergenic | 30.0% | |
| !!! | GATGTTTTAGTGACATGAAA+AGG | - | chr1_3:53867975-53867994 | None:intergenic | 30.0% |
| GTCACTAAAACATCTTCAAA+TGG | + | chr1_3:53867981-53868000 | Msa0125370:CDS | 30.0% | |
| TAGATGTTGAGAATAGCTAA+AGG | - | chr1_3:53868390-53868409 | None:intergenic | 30.0% | |
| TGAAAGTTCTCAAAGAGAAT+CGG | + | chr1_3:53868534-53868553 | Msa0125370:CDS | 30.0% | |
| ! | ATCAAAATCATGACTTGTAC+AGG | + | chr1_3:53868596-53868615 | Msa0125370:CDS | 30.0% |
| ! | ATGGATTGATTACAAACCAA+TGG | + | chr1_3:53869022-53869041 | Msa0125370:CDS | 30.0% |
| GCCATATTTGAGTAATAATC+TGG | - | chr1_3:53869120-53869139 | None:intergenic | 30.0% | |
| TATTACTCAAATATGGCATG+TGG | + | chr1_3:53869123-53869142 | Msa0125370:CDS | 30.0% | |
| TCAATGGTTATACTGTATTC+AGG | + | chr1_3:53869148-53869167 | Msa0125370:CDS | 30.0% | |
| TTTCTGATTGATCACACGTA+TGG | + | chr1_3:53860369-53860388 | Msa0125370:intron | 35.0% | |
| ! | TTTTTGCTTGCCAATAGCTA+TGG | + | chr1_3:53860524-53860543 | Msa0125370:intron | 35.0% |
| AAGTGATGTTCCATAGCTAT+TGG | - | chr1_3:53860537-53860556 | None:intergenic | 35.0% | |
| !! | TTGCACAAGAAAGCATTTCA+TGG | - | chr1_3:53860695-53860714 | None:intergenic | 35.0% |
| ACTATCAAGCTATCAAGCAT+GGG | - | chr1_3:53860857-53860876 | None:intergenic | 35.0% | |
| CCTAATATGTGCAAATCAGT+AGG | - | chr1_3:53861060-53861079 | None:intergenic | 35.0% | |
| !! | CCTACTGATTTGCACATATT+AGG | + | chr1_3:53861057-53861076 | Msa0125370:intron | 35.0% |
| ! | ATGGAATATACGACACCTTT+TGG | + | chr1_3:53861136-53861155 | Msa0125370:intron | 35.0% |
| !!! | ACCTTTTGGCTTTATAGGTT+TGG | + | chr1_3:53861150-53861169 | Msa0125370:intron | 35.0% |
| TCCAAACCTATAAAGCCAAA+AGG | - | chr1_3:53861154-53861173 | None:intergenic | 35.0% | |
| CCTACAAAACACAAGAAACA+GGG | - | chr1_3:53861196-53861215 | None:intergenic | 35.0% | |
| TCCTACAAAACACAAGAAAC+AGG | - | chr1_3:53861197-53861216 | None:intergenic | 35.0% | |
| ! | GTTTTGTAGGATGTAAACTC+TGG | + | chr1_3:53861206-53861225 | Msa0125370:intron | 35.0% |
| TTGTCCTTGCTCATATATTC+AGG | + | chr1_3:53861306-53861325 | Msa0125370:CDS | 35.0% | |
| ! | TTTTGCAAATAAACAGCTCC+CGG | - | chr1_3:53861425-53861444 | None:intergenic | 35.0% |
| AATTAGTGGAGTCTACTACT+GGG | - | chr1_3:53861452-53861471 | None:intergenic | 35.0% | |
| AAATTAGTGGAGTCTACTAC+TGG | - | chr1_3:53861453-53861472 | None:intergenic | 35.0% | |
| !! | GGTTTCTAGTTTGTAAGAGA+TGG | + | chr1_3:53861497-53861516 | Msa0125370:intron | 35.0% |
| ! | TGGGTTTTTCCCAATAGAAA+GGG | - | chr1_3:53861805-53861824 | None:intergenic | 35.0% |
| ! | TTGGGTTTTTCCCAATAGAA+AGG | - | chr1_3:53861806-53861825 | None:intergenic | 35.0% |
| GCTCTATATTCACTCTATGT+GGG | - | chr1_3:53861831-53861850 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_3:53861896-53861915 | None:intergenic | 35.0% | |
| GCATGGATATAAATTGTGGA+TGG | - | chr1_3:53861963-53861982 | None:intergenic | 35.0% | |
| GGCTCTATCTTTATTCTATG+TGG | - | chr1_3:53862039-53862058 | None:intergenic | 35.0% | |
| ! | TTTTATAAAACCGGCTGGTA+AGG | - | chr1_3:53862090-53862109 | None:intergenic | 35.0% |
| !!! | TATTGCACTGCTTTTTCATG+AGG | - | chr1_3:53862211-53862230 | None:intergenic | 35.0% |
| ATCATAGAAAGCAACACAGA+GGG | - | chr1_3:53862289-53862308 | None:intergenic | 35.0% | |
| AATCATAGAAAGCAACACAG+AGG | - | chr1_3:53862290-53862309 | None:intergenic | 35.0% | |
| CAAGTCAGGATACCAAATTA+GGG | - | chr1_3:53862337-53862356 | None:intergenic | 35.0% | |
| TTAAAGATGTGACACACGAT+GGG | - | chr1_3:53862509-53862528 | None:intergenic | 35.0% | |
| ATTAAAGATGTGACACACGA+TGG | - | chr1_3:53862510-53862529 | None:intergenic | 35.0% | |
| ATCGTGTGTCACATCTTTAA+TGG | + | chr1_3:53862509-53862528 | Msa0125370:intron | 35.0% | |
| CACCCATGAAATTAGGAATT+AGG | - | chr1_3:53862752-53862771 | None:intergenic | 35.0% | |
| CAAAATTGAGGTTGCTTATC+AGG | + | chr1_3:53862778-53862797 | Msa0125370:CDS | 35.0% | |
| AAAAGAAGGCAAAGAAAAGC+AGG | + | chr1_3:53862903-53862922 | Msa0125370:CDS | 35.0% | |
| TGTACCGGAATTTATGAGAA+TGG | - | chr1_3:53863120-53863139 | None:intergenic | 35.0% | |
| TTCCCAACTGATTAGAGTTA+TGG | + | chr1_3:53863194-53863213 | Msa0125370:intron | 35.0% | |
| AGCCATAACTCTAATCAGTT+GGG | - | chr1_3:53863199-53863218 | None:intergenic | 35.0% | |
| TAGCCATAACTCTAATCAGT+TGG | - | chr1_3:53863200-53863219 | None:intergenic | 35.0% | |
| AGTTAGTACCATCTTGGAAT+TGG | - | chr1_3:53863293-53863312 | None:intergenic | 35.0% | |
| !!! | TCCACCCTAGTTTTGTTTTT+GGG | + | chr1_3:53863312-53863331 | Msa0125370:intron | 35.0% |
| TTGGCCCAAAAACAAAACTA+GGG | - | chr1_3:53863319-53863338 | None:intergenic | 35.0% | |
| TGAAGCATGTACAAATTTGG+TGG | - | chr1_3:53863408-53863427 | None:intergenic | 35.0% | |
| ! | TGTCTAATTTTAGGCGTGAT+AGG | + | chr1_3:53863430-53863449 | Msa0125370:intron | 35.0% |
| TGGCCAAATTAGTCCTTATA+TGG | + | chr1_3:53863557-53863576 | Msa0125370:intron | 35.0% | |
| TCTACTCAATCATTTGCTTG+TGG | - | chr1_3:53863650-53863669 | None:intergenic | 35.0% | |
| ! | TTTTTATGTGTACCATGGCT+AGG | + | chr1_3:53863735-53863754 | Msa0125370:intron | 35.0% |
| ATATACAAACTTCCTAGCCA+TGG | - | chr1_3:53863750-53863769 | None:intergenic | 35.0% | |
| ! | TATTTAACCTTGCTGTGAAG+TGG | + | chr1_3:53863767-53863786 | Msa0125370:intron | 35.0% |
| TAAAATTCCACTTCACAGCA+AGG | - | chr1_3:53863777-53863796 | None:intergenic | 35.0% | |
| TCTAATCAGGCCTCAAAAAA+AGG | - | chr1_3:53863820-53863839 | None:intergenic | 35.0% | |
| !!! | TTTTTTGAGGCCTGATTAGA+TGG | + | chr1_3:53863820-53863839 | Msa0125370:intron | 35.0% |
| TAGTTCATGGCTGAACATTA+CGG | + | chr1_3:53863917-53863936 | Msa0125370:intron | 35.0% | |
| ATTACAGCAACTCAAACCAT+AGG | - | chr1_3:53864002-53864021 | None:intergenic | 35.0% | |
| GCTGTAATGAATACCATGTT+TGG | + | chr1_3:53864014-53864033 | Msa0125370:intron | 35.0% | |
| GTTAAGGTAGGAGATTAAAG+TGG | + | chr1_3:53864307-53864326 | Msa0125370:intron | 35.0% | |
| AAGTGGAACATTGAAACTTG+GGG | + | chr1_3:53864324-53864343 | Msa0125370:intron | 35.0% | |
| !! | CAGTTCTAAAGCTTTCTTTG+CGG | - | chr1_3:53864357-53864376 | None:intergenic | 35.0% |
| AGGGAATACCATAAAATCCT+AGG | - | chr1_3:53864414-53864433 | None:intergenic | 35.0% | |
| TGGTATTCCCTTTATAACCT+TGG | + | chr1_3:53864423-53864442 | Msa0125370:intron | 35.0% | |
| TAGGATGCCAAGGTTATAAA+GGG | - | chr1_3:53864433-53864452 | None:intergenic | 35.0% | |
| TTAGGATGCCAAGGTTATAA+AGG | - | chr1_3:53864434-53864453 | None:intergenic | 35.0% | |
| !! | GTGAAATTAATGGACTTGGA+TGG | - | chr1_3:53864489-53864508 | None:intergenic | 35.0% |
| !!! | GCTTGCTTTTCCTGTTTTTA+TGG | + | chr1_3:53864645-53864664 | Msa0125370:intron | 35.0% |
| ! | TAAGGCTAGTCCATAAAAAC+AGG | - | chr1_3:53864658-53864677 | None:intergenic | 35.0% |
| AACCGCCAATACATTCTTAA+AGG | + | chr1_3:53864733-53864752 | Msa0125370:intron | 35.0% | |
| ! | GACCTTTAAGAATGTATTGG+CGG | - | chr1_3:53864738-53864757 | None:intergenic | 35.0% |
| ! | AAGCATCTGAAAGCATAAGA+TGG | + | chr1_3:53864812-53864831 | Msa0125370:intron | 35.0% |
| AGTCCTTAGGAATGTATTGA+CGG | - | chr1_3:53864906-53864925 | None:intergenic | 35.0% | |
| ACATAAAAGCCCTCATTACT+TGG | + | chr1_3:53865061-53865080 | Msa0125370:intron | 35.0% | |
| CATAAAAGCCCTCATTACTT+GGG | + | chr1_3:53865062-53865081 | Msa0125370:intron | 35.0% | |
| ATAAAAGCCCTCATTACTTG+GGG | + | chr1_3:53865063-53865082 | Msa0125370:intron | 35.0% | |
| GTGGTATTTATAGCCTGTTA+TGG | - | chr1_3:53865111-53865130 | None:intergenic | 35.0% | |
| TGAAGAAGAGAATGAGAAGA+AGG | + | chr1_3:53865277-53865296 | Msa0125370:intron | 35.0% | |
| GTTTAGATGAAGAGTTCAGA+TGG | + | chr1_3:53865384-53865403 | Msa0125370:intron | 35.0% | |
| AAGGAGAGAATAATTAGGGT+TGG | + | chr1_3:53865439-53865458 | Msa0125370:intron | 35.0% | |
| TTCTTGTGCTAAGCTGTTTA+TGG | + | chr1_3:53865584-53865603 | Msa0125370:intron | 35.0% | |
| ACAGGAAAAAACTCCAAGAA+GGG | - | chr1_3:53865633-53865652 | None:intergenic | 35.0% | |
| CGAAAGCTAAGAAATTACAC+AGG | - | chr1_3:53865651-53865670 | None:intergenic | 35.0% | |
| TAAGATCGAGGAATGTAACA+CGG | - | chr1_3:53865819-53865838 | None:intergenic | 35.0% | |
| ! | ACGTCTCATTTTCCTATACA+TGG | + | chr1_3:53866056-53866075 | Msa0125370:intron | 35.0% |
| ! | CGTCTCATTTTCCTATACAT+GGG | + | chr1_3:53866057-53866076 | Msa0125370:intron | 35.0% |
| !! | CTTATTGTTCCGCTTTTGTT+TGG | - | chr1_3:53866150-53866169 | None:intergenic | 35.0% |
| GCGGAACAATAAGAAAGTAA+AGG | + | chr1_3:53866157-53866176 | Msa0125370:CDS | 35.0% | |
| !! | CAATGGTGTTGATGAGAAAA+TGG | + | chr1_3:53866235-53866254 | Msa0125370:CDS | 35.0% |
| AGTTACTGAAATGCTTCATC+TGG | + | chr1_3:53866340-53866359 | Msa0125370:CDS | 35.0% | |
| GAGATACTAGTCCTGTTAAT+TGG | + | chr1_3:53866375-53866394 | Msa0125370:CDS | 35.0% | |
| GATGTTTCATCCAGACAAAA+TGG | + | chr1_3:53866455-53866474 | Msa0125370:CDS | 35.0% | |
| !! | TTGGCTCTTTTTATCTGTAG+AGG | + | chr1_3:53866697-53866716 | Msa0125370:intron | 35.0% |
| ATTAACAAAGAGTCTGGAAG+TGG | + | chr1_3:53866811-53866830 | Msa0125370:CDS | 35.0% | |
| ATTGAAGGATCGGTTAAAGT+GGG | + | chr1_3:53866873-53866892 | Msa0125370:CDS | 35.0% | |
| TGTCCCATTTCTACTCTTAT+TGG | + | chr1_3:53866921-53866940 | Msa0125370:intron | 35.0% | |
| AGAAATCAACAGATAAGCTC+CGG | - | chr1_3:53866982-53867001 | None:intergenic | 35.0% | |
| ! | TGTGGATCCCATTTAAAGTA+GGG | - | chr1_3:53867235-53867254 | None:intergenic | 35.0% |
| ! | ATGTGGATCCCATTTAAAGT+AGG | - | chr1_3:53867236-53867255 | None:intergenic | 35.0% |
| TCTTTCTAACACTCTCTCAT+TGG | - | chr1_3:53867268-53867287 | None:intergenic | 35.0% | |
| !! | AATCATTGTTGATTTGTCCC+CGG | - | chr1_3:53867425-53867444 | None:intergenic | 35.0% |
| !! | CCTTTGGAATAACAAAAGAG+TGG | - | chr1_3:53867464-53867483 | None:intergenic | 35.0% |
| !!! | CCACTCTTTTGTTATTCCAA+AGG | + | chr1_3:53867461-53867480 | Msa0125370:intron | 35.0% |
| !! | TTGTGATTAGTTTAAGGGAG+AGG | + | chr1_3:53867633-53867652 | Msa0125370:intron | 35.0% |
| !!! | TTTTTGGCCTTGTTGTTGTT+AGG | + | chr1_3:53867670-53867689 | Msa0125370:intron | 35.0% |
| TGGATCTTTATCAGTCTGTT+GGG | - | chr1_3:53868009-53868028 | None:intergenic | 35.0% | |
| ATGGATCTTTATCAGTCTGT+TGG | - | chr1_3:53868010-53868029 | None:intergenic | 35.0% | |
| TCAACTGCAAGATTAACTGA+AGG | + | chr1_3:53868092-53868111 | Msa0125370:CDS | 35.0% | |
| ATAGCATTTCTGTAGGATTG+AGG | - | chr1_3:53868293-53868312 | None:intergenic | 35.0% | |
| ATCCTACAGAAATGCTATCA+TGG | + | chr1_3:53868295-53868314 | Msa0125370:CDS | 35.0% | |
| TCCTACAGAAATGCTATCAT+GGG | + | chr1_3:53868296-53868315 | Msa0125370:CDS | 35.0% | |
| TGTTGAGAATAGCTAAAGGA+CGG | - | chr1_3:53868386-53868405 | None:intergenic | 35.0% | |
| TTCCATTCTATCAGAGCTAT+GGG | - | chr1_3:53868440-53868459 | None:intergenic | 35.0% | |
| TTTCCATTCTATCAGAGCTA+TGG | - | chr1_3:53868441-53868460 | None:intergenic | 35.0% | |
| ! | ACACAGGATGTTTTACAGAA+TGG | + | chr1_3:53868499-53868518 | Msa0125370:CDS | 35.0% |
| TTGAGAACTTTCAATCCACT+GGG | - | chr1_3:53868527-53868546 | None:intergenic | 35.0% | |
| TTTGAGAACTTTCAATCCAC+TGG | - | chr1_3:53868528-53868547 | None:intergenic | 35.0% | |
| TTGATCATCATTAAGACCAG+CGG | - | chr1_3:53868581-53868600 | None:intergenic | 35.0% | |
| CGTTTATGATATCAAGGTGA+GGG | - | chr1_3:53868711-53868730 | None:intergenic | 35.0% | |
| TCGTTTATGATATCAAGGTG+AGG | - | chr1_3:53868712-53868731 | None:intergenic | 35.0% | |
| !! | AATTGTCGATTTAGCGATTG+CGG | - | chr1_3:53868808-53868827 | None:intergenic | 35.0% |
| CAAAGTTACCATCATGATCA+TGG | + | chr1_3:53868901-53868920 | Msa0125370:CDS | 35.0% | |
| AAGTGAATCAAAATGCCCAT+GGG | - | chr1_3:53868950-53868969 | None:intergenic | 35.0% | |
| TAAGTGAATCAAAATGCCCA+TGG | - | chr1_3:53868951-53868970 | None:intergenic | 35.0% | |
| !!! | ATGGGCATTTTGATTCACTT+AGG | + | chr1_3:53868950-53868969 | Msa0125370:CDS | 35.0% |
| !!! | TGGGCATTTTGATTCACTTA+GGG | + | chr1_3:53868951-53868970 | Msa0125370:CDS | 35.0% |
| ATTGATTACAAACCAATGGC+AGG | + | chr1_3:53869026-53869045 | Msa0125370:CDS | 35.0% | |
| ATGAGAAACACAGAGAATGA+TGG | + | chr1_3:53869081-53869100 | Msa0125370:CDS | 35.0% | |
| TGAATTAGTGGGGGAATTTG+TGG | + | chr1_3:53860645-53860664 | Msa0125370:intron | 40.0% | |
| GAATTAGTGGGGGAATTTGT+GGG | + | chr1_3:53860646-53860665 | Msa0125370:intron | 40.0% | |
| !!! | AAATTGGTTTTGGCTGTGGA+AGG | + | chr1_3:53860766-53860785 | Msa0125370:intron | 40.0% |
| CACTATCAAGCTATCAAGCA+TGG | - | chr1_3:53860858-53860877 | None:intergenic | 40.0% | |
| TATAACTACCAACAGGGCTA+TGG | + | chr1_3:53861117-53861136 | Msa0125370:intron | 40.0% | |
| !!! | ACGACACCTTTTGGCTTTAT+AGG | + | chr1_3:53861145-53861164 | Msa0125370:intron | 40.0% |
| CAGGGTTCTTAGCAATCAAA+AGG | - | chr1_3:53861178-53861197 | None:intergenic | 40.0% | |
| !! | CCCTGTTTCTTGTGTTTTGT+AGG | + | chr1_3:53861193-53861212 | Msa0125370:intron | 40.0% |
| ATTCTATTGAGCGCGATGAA+AGG | + | chr1_3:53861246-53861265 | Msa0125370:CDS | 40.0% | |
| !! | AAAGGCGTCTCACAGAATTA+GGG | + | chr1_3:53861264-53861283 | Msa0125370:CDS | 40.0% |
| GCTACCTGAATATATGAGCA+AGG | - | chr1_3:53861313-53861332 | None:intergenic | 40.0% | |
| ! | ACTCCTGAATTTTGTCTGTC+CGG | + | chr1_3:53861403-53861422 | Msa0125370:intron | 40.0% |
| ATTCACTCTATGTGGGACTT+GGG | - | chr1_3:53861824-53861843 | None:intergenic | 40.0% | |
| TATTCACTCTATGTGGGACT+TGG | - | chr1_3:53861825-53861844 | None:intergenic | 40.0% | |
| GGCTCTATATTCACTCTATG+TGG | - | chr1_3:53861832-53861851 | None:intergenic | 40.0% | |
| GATAGGCCTGATACCATATT+AGG | - | chr1_3:53861933-53861952 | None:intergenic | 40.0% | |
| CTAATATGTCCAGTCCTGTT+GGG | - | chr1_3:53861992-53862011 | None:intergenic | 40.0% | |
| TCTAATATGTCCAGTCCTGT+TGG | - | chr1_3:53861993-53862012 | None:intergenic | 40.0% | |
| AACAGGACTGGACATATTAG+AGG | + | chr1_3:53861992-53862011 | Msa0125370:intron | 40.0% | |
| ! | TTGATGCCAGTTGTTTCAGA+TGG | + | chr1_3:53862148-53862167 | Msa0125370:intron | 40.0% |
| ! | ACAACACCATCTGAAACAAC+TGG | - | chr1_3:53862157-53862176 | None:intergenic | 40.0% |
| CCAAGTCAGGATACCAAATT+AGG | - | chr1_3:53862338-53862357 | None:intergenic | 40.0% | |
| CCTAATTTGGTATCCTGACT+TGG | + | chr1_3:53862335-53862354 | Msa0125370:intron | 40.0% | |
| ! | GATCCTTGTTTGTCAAGACT+AGG | + | chr1_3:53862385-53862404 | Msa0125370:intron | 40.0% |
| !! | ACACCTAGTCTTGACAAACA+AGG | - | chr1_3:53862391-53862410 | None:intergenic | 40.0% |
| ACGATGGGGGAATCAATTAA+CGG | - | chr1_3:53862494-53862513 | None:intergenic | 40.0% | |
| TAAAGATGTGACACACGATG+GGG | - | chr1_3:53862508-53862527 | None:intergenic | 40.0% | |
| GGTGATCAGAAAACAAAACG+TGG | + | chr1_3:53862866-53862885 | Msa0125370:CDS | 40.0% | |
| AAAACGTGGAGTCAATGAGA+GGG | + | chr1_3:53862880-53862899 | Msa0125370:CDS | 40.0% | |
| AGTCAATGAGAGGGAAAAGA+AGG | + | chr1_3:53862889-53862908 | Msa0125370:CDS | 40.0% | |
| !! | TTTAAGAGGTGAAGGTGTTC+TGG | - | chr1_3:53863239-53863258 | None:intergenic | 40.0% |
| ACCTAAGTCCAATTCCAAGA+TGG | + | chr1_3:53863282-53863301 | Msa0125370:intron | 40.0% | |
| ACCATCTTGGAATTGGACTT+AGG | - | chr1_3:53863286-53863305 | None:intergenic | 40.0% | |
| !!! | CTCCACCCTAGTTTTGTTTT+TGG | + | chr1_3:53863311-53863330 | Msa0125370:intron | 40.0% |
| CTTGGCCCAAAAACAAAACT+AGG | - | chr1_3:53863320-53863339 | None:intergenic | 40.0% | |
| !!! | CTAGTTTTGTTTTTGGGCCA+AGG | + | chr1_3:53863318-53863337 | Msa0125370:intron | 40.0% |
| TCTTAGCACAACTTACACTC+AGG | - | chr1_3:53863371-53863390 | None:intergenic | 40.0% | |
| ! | AACACAGGATATCTGAAGCA+TGG | - | chr1_3:53863494-53863513 | None:intergenic | 40.0% |
| !! | TATCCTGTGTTGATTGTGAG+AGG | + | chr1_3:53863503-53863522 | Msa0125370:intron | 40.0% |
| TGCCATGTCAACTAGAGATA+TGG | + | chr1_3:53863537-53863556 | Msa0125370:intron | 40.0% | |
| GCTTGTGGTCTTCAGAATTT+CGG | - | chr1_3:53863635-53863654 | None:intergenic | 40.0% | |
| AGACTATCCTCCATCTAATC+AGG | - | chr1_3:53863833-53863852 | None:intergenic | 40.0% | |
| !! | TTACGGTGTCACTTGATCTT+TGG | + | chr1_3:53863934-53863953 | Msa0125370:CDS | 40.0% |
| GAATCGGTTACATAGGTCAA+GGG | - | chr1_3:53863963-53863982 | None:intergenic | 40.0% | |
| TTGGATGGAATCGGTTACAT+AGG | - | chr1_3:53863970-53863989 | None:intergenic | 40.0% | |
| ! | ATGTAACCGATTCCATCCAA+TGG | + | chr1_3:53863970-53863989 | Msa0125370:CDS | 40.0% |
| ! | TGTAACCGATTCCATCCAAT+GGG | + | chr1_3:53863971-53863990 | Msa0125370:CDS | 40.0% |
| ! | CTTTTCCCATTGGATGGAAT+CGG | - | chr1_3:53863979-53863998 | None:intergenic | 40.0% |
| ! | AAACCATAGGCTTTTCCCAT+TGG | - | chr1_3:53863989-53864008 | None:intergenic | 40.0% |
| ! | AATTTCTAGGAAGGCAAGGA+TGG | - | chr1_3:53864205-53864224 | None:intergenic | 40.0% |
| ! | ATGCAATTTCTAGGAAGGCA+AGG | - | chr1_3:53864209-53864228 | None:intergenic | 40.0% |
| ! | AATGGATGTTTAGGATGCCA+AGG | - | chr1_3:53864443-53864462 | None:intergenic | 40.0% |
| TGCTTTCAGATGCTTGCAAA+GGG | - | chr1_3:53864807-53864826 | None:intergenic | 40.0% | |
| ATGCTTTCAGATGCTTGCAA+AGG | - | chr1_3:53864808-53864827 | None:intergenic | 40.0% | |
| GAACCGTCAATACATTCCTA+AGG | + | chr1_3:53864900-53864919 | Msa0125370:intron | 40.0% | |
| !! | TTCTAGAAGTCTCTAGAGCT+CGG | + | chr1_3:53865031-53865050 | Msa0125370:intron | 40.0% |
| ACTTAAGCCCCAAGTAATGA+GGG | - | chr1_3:53865073-53865092 | None:intergenic | 40.0% | |
| TTTATAGCCTGTTATGGGCT+TGG | - | chr1_3:53865105-53865124 | None:intergenic | 40.0% | |
| GAAGAAGGAAGAAGAAGTGA+AGG | + | chr1_3:53865292-53865311 | Msa0125370:intron | 40.0% | |
| GAATGAGAACGATTGAAGAG+AGG | + | chr1_3:53865329-53865348 | Msa0125370:intron | 40.0% | |
| ATGAAGAGTTCAGATGGATG+TGG | + | chr1_3:53865390-53865409 | Msa0125370:intron | 40.0% | |
| TGTGTTTGAGGAGAACAGAA+AGG | + | chr1_3:53865420-53865439 | Msa0125370:intron | 40.0% | |
| CACAGGAAAAAACTCCAAGA+AGG | - | chr1_3:53865634-53865653 | None:intergenic | 40.0% | |
| TCCTGACTACATTGTTCTCA+AGG | + | chr1_3:53865879-53865898 | Msa0125370:intron | 40.0% | |
| ! | ACTCTCCTTTTCCCATGTAT+AGG | - | chr1_3:53866071-53866090 | None:intergenic | 40.0% |
| ! | TGTTCCTTTCTTTTCACTGC+AGG | + | chr1_3:53866124-53866143 | Msa0125370:intron | 40.0% |
| AGAAAGTAAAGGACAAAGGG+AGG | + | chr1_3:53866168-53866187 | Msa0125370:CDS | 40.0% | |
| GAAAGTAAAGGACAAAGGGA+GGG | + | chr1_3:53866169-53866188 | Msa0125370:CDS | 40.0% | |
| CATCAACACCATTGTCTTCT+TGG | - | chr1_3:53866229-53866248 | None:intergenic | 40.0% | |
| GTCTGAAAAGCCTGATACTA+TGG | + | chr1_3:53866283-53866302 | Msa0125370:CDS | 40.0% | |
| GCATCAGTATCCCAATTAAC+AGG | - | chr1_3:53866389-53866408 | None:intergenic | 40.0% | |
| GACTACTGATGGCAAAGAAT+CGG | - | chr1_3:53866539-53866558 | None:intergenic | 40.0% | |
| GAGTCAATCATGACTACTGA+TGG | - | chr1_3:53866550-53866569 | None:intergenic | 40.0% | |
| ! | AGTCATGATTGACTCCTACA+AGG | + | chr1_3:53866555-53866574 | Msa0125370:intron | 40.0% |
| ! | GTCATGATTGACTCCTACAA+GGG | + | chr1_3:53866556-53866575 | Msa0125370:intron | 40.0% |
| ! | TCATGATTGACTCCTACAAG+GGG | + | chr1_3:53866557-53866576 | Msa0125370:intron | 40.0% |
| TGAAAAAGAGTTCCCCTTGT+AGG | - | chr1_3:53866572-53866591 | None:intergenic | 40.0% | |
| AAGCTAAATACTTGCCTGCT+AGG | - | chr1_3:53866616-53866635 | None:intergenic | 40.0% | |
| ATCTGTAGAGGTAAGAACAG+AGG | + | chr1_3:53866709-53866728 | Msa0125370:intron | 40.0% | |
| GGGGTTATTAACAAAGAGTC+TGG | + | chr1_3:53866805-53866824 | Msa0125370:CDS | 40.0% | |
| CTGTTGTCACATTGAAGGAT+CGG | + | chr1_3:53866863-53866882 | Msa0125370:CDS | 40.0% | |
| CATTGAAGGATCGGTTAAAG+TGG | + | chr1_3:53866872-53866891 | Msa0125370:CDS | 40.0% | |
| ! | TGAGAAGCATGTTGTCAGAA+AGG | + | chr1_3:53866897-53866916 | Msa0125370:CDS | 40.0% |
| !! | TCTAGCTCTCTAAGATGAGA+AGG | - | chr1_3:53867070-53867089 | None:intergenic | 40.0% |
| TCTAACACTCACTCTCTCAT+TGG | + | chr1_3:53867190-53867209 | Msa0125370:intron | 40.0% | |
| CTAACACTCACTCTCTCATT+GGG | + | chr1_3:53867191-53867210 | Msa0125370:intron | 40.0% | |
| CTCATTGGGTGAAATCAATG+TGG | + | chr1_3:53867205-53867224 | Msa0125370:intron | 40.0% | |
| TGGATCCCCCTACTTTAAAT+GGG | + | chr1_3:53867225-53867244 | Msa0125370:intron | 40.0% | |
| ! | TGGATCCCATTTAAAGTAGG+GGG | - | chr1_3:53867233-53867252 | None:intergenic | 40.0% |
| ! | GTGGATCCCATTTAAAGTAG+GGG | - | chr1_3:53867234-53867253 | None:intergenic | 40.0% |
| AGGTCTTAAAAATGGAGGGA+TGG | + | chr1_3:53867325-53867344 | Msa0125370:intron | 40.0% | |
| GGTGTCTATAATGTGAGACA+TGG | - | chr1_3:53867510-53867529 | None:intergenic | 40.0% | |
| !! | AACTCAGATTCTTTTTGGGG+TGG | - | chr1_3:53867537-53867556 | None:intergenic | 40.0% |
| AGGGAGAGGCTTGAATATTA+AGG | + | chr1_3:53867647-53867666 | Msa0125370:intron | 40.0% | |
| !! | CTTTTCTAATGGATAGGACG+AGG | + | chr1_3:53867785-53867804 | Msa0125370:intron | 40.0% |
| CCAACTTCGTCTTTGATGTT+GGG | - | chr1_3:53867834-53867853 | None:intergenic | 40.0% | |
| CCAACATCAAAGACGAAGTT+GGG | + | chr1_3:53867832-53867851 | Msa0125370:CDS | 40.0% | |
| ! | AGTCTTCTGGATCTCAGTTT+TGG | - | chr1_3:53868072-53868091 | None:intergenic | 40.0% |
| ATCTTGCAGTTGAAGTCTTC+TGG | - | chr1_3:53868085-53868104 | None:intergenic | 40.0% | |
| CTTGAAGGTCTTGAGATAGT+AGG | - | chr1_3:53868134-53868153 | None:intergenic | 40.0% | |
| AAGACCTTCAAGTACTCCTT+TGG | + | chr1_3:53868142-53868161 | Msa0125370:CDS | 40.0% | |
| !! | GAAACCAAAGGAGTACTTGA+AGG | - | chr1_3:53868149-53868168 | None:intergenic | 40.0% |
| ! | TCAAGTACTCCTTTGGTTTC+TGG | + | chr1_3:53868149-53868168 | Msa0125370:CDS | 40.0% |
| TTGAGGAACATGACTATGAG+TGG | - | chr1_3:53868276-53868295 | None:intergenic | 40.0% | |
| CCTACAGAAATGCTATCATG+GGG | + | chr1_3:53868297-53868316 | Msa0125370:CDS | 40.0% | |
| GTTGAGAATAGCTAAAGGAC+GGG | - | chr1_3:53868385-53868404 | None:intergenic | 40.0% | |
| GCTATTCTCAACATCTACCT+TGG | + | chr1_3:53868393-53868412 | Msa0125370:intron | 40.0% | |
| GAGCTATGGGATAGAAAGAT+TGG | - | chr1_3:53868427-53868446 | None:intergenic | 40.0% | |
| !! | ATCCCATAGCTCTGATAGAA+TGG | + | chr1_3:53868435-53868454 | Msa0125370:intron | 40.0% |
| ! | TTTTACAGAATGGTTCCCAG+TGG | + | chr1_3:53868509-53868528 | Msa0125370:CDS | 40.0% |
| TGATCATCATTAAGACCAGC+GGG | - | chr1_3:53868580-53868599 | None:intergenic | 40.0% | |
| CCACTACACAGTAGATCTAT+GGG | + | chr1_3:53868619-53868638 | Msa0125370:CDS | 40.0% | |
| GCAGGTCGTTTATGATATCA+AGG | - | chr1_3:53868717-53868736 | None:intergenic | 40.0% | |
| !! | CTTGATGATGAGCATACTGT+TGG | + | chr1_3:53868736-53868755 | Msa0125370:CDS | 40.0% |
| TGAGCATACTGTTGGAAAGA+CGG | + | chr1_3:53868744-53868763 | Msa0125370:CDS | 40.0% | |
| GATTCGAGTGTCTGAGAAAT+GGG | + | chr1_3:53868782-53868801 | Msa0125370:CDS | 40.0% | |
| AATCGACAATTCAGCTTTCC+TGG | + | chr1_3:53868817-53868836 | Msa0125370:CDS | 40.0% | |
| TAAGGCATGCTAGTAACTTG+CGG | - | chr1_3:53868985-53869004 | None:intergenic | 40.0% | |
| ACTAGCATGCCTTATGTCAA+TGG | + | chr1_3:53868991-53869010 | Msa0125370:CDS | 40.0% | |
| TCAACCTGTCCATTGACATA+AGG | - | chr1_3:53869003-53869022 | None:intergenic | 40.0% | |
| ! | TATGTCAATGGACAGGTTGA+TGG | + | chr1_3:53869003-53869022 | Msa0125370:CDS | 40.0% |
| ATGCCTGCATACAATAGATC+AGG | - | chr1_3:53869063-53869082 | None:intergenic | 40.0% | |
| ! | AATATGGCATGTGGTGTCAA+TGG | + | chr1_3:53869132-53869151 | Msa0125370:CDS | 40.0% |
| CGTATATTCCATAGCCCTGT+TGG | - | chr1_3:53861128-53861147 | None:intergenic | 45.0% | |
| GTAGGATGTAAACTCTGGTG+AGG | + | chr1_3:53861211-53861230 | Msa0125370:intron | 45.0% | |
| !! | GAAAGGCGTCTCACAGAATT+AGG | + | chr1_3:53861263-53861282 | Msa0125370:CDS | 45.0% |
| AGAATTAGGGCGTAGGACTT+TGG | + | chr1_3:53861277-53861296 | Msa0125370:CDS | 45.0% | |
| ! | CTCCTGAATTTTGTCTGTCC+GGG | + | chr1_3:53861404-53861423 | Msa0125370:intron | 45.0% |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | - | chr1_3:53861881-53861900 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1_3:53861887-53861906 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1_3:53861884-53861903 | Msa0125370:intron | 45.0% |
| ATGGTATCAGGCCTATCGAT+TGG | + | chr1_3:53861936-53861955 | Msa0125370:intron | 45.0% | |
| ! | TGGTATCAGGCCTATCGATT+GGG | + | chr1_3:53861937-53861956 | Msa0125370:intron | 45.0% |
| !! | TTTGGTATCCTGACTTGGAG+AGG | + | chr1_3:53862340-53862359 | Msa0125370:intron | 45.0% |
| !! | TTGGTATCCTGACTTGGAGA+GGG | + | chr1_3:53862341-53862360 | Msa0125370:intron | 45.0% |
| AAAGATGTGACACACGATGG+GGG | - | chr1_3:53862507-53862526 | None:intergenic | 45.0% | |
| GTTGCTGCACCCATGAAATT+AGG | - | chr1_3:53862759-53862778 | None:intergenic | 45.0% | |
| TGGGTGCAGCAACAAAATTG+AGG | + | chr1_3:53862766-53862785 | Msa0125370:intron | 45.0% | |
| AGAACTCATCCGTGAAGAAG+AGG | + | chr1_3:53862826-53862845 | Msa0125370:CDS | 45.0% | |
| CAAAACGTGGAGTCAATGAG+AGG | + | chr1_3:53862879-53862898 | Msa0125370:CDS | 45.0% | |
| !! | GAAGGTGTTCTGGCCTTATA+CGG | - | chr1_3:53863229-53863248 | None:intergenic | 45.0% |
| GCCCAAAAACAAAACTAGGG+TGG | - | chr1_3:53863316-53863335 | None:intergenic | 45.0% | |
| GAAGCGCAGACAAATATCCT+TGG | - | chr1_3:53863338-53863357 | None:intergenic | 45.0% | |
| ! | ATCTGAAGCATGGTTTCACG+TGG | - | chr1_3:53863484-53863503 | None:intergenic | 45.0% |
| CATCCTCTCACAATCAACAC+AGG | - | chr1_3:53863509-53863528 | None:intergenic | 45.0% | |
| GGCCATATCTCTAGTTGACA+TGG | - | chr1_3:53863542-53863561 | None:intergenic | 45.0% | |
| ! | GCTTCTTGAGCTCGTTTTGA+GGG | + | chr1_3:53863594-53863613 | Msa0125370:intron | 45.0% |
| !!! | CTCGTTTTGAGGGTTGAGTT+AGG | + | chr1_3:53863604-53863623 | Msa0125370:intron | 45.0% |
| TGGTCTTCAGAATTTCGGCA+TGG | - | chr1_3:53863630-53863649 | None:intergenic | 45.0% | |
| ! | TTTGAGGCCTGATTAGATGG+AGG | + | chr1_3:53863823-53863842 | Msa0125370:intron | 45.0% |
| GGAATCGGTTACATAGGTCA+AGG | - | chr1_3:53863964-53863983 | None:intergenic | 45.0% | |
| ! | CATAGGCTTTTCCCATTGGA+TGG | - | chr1_3:53863985-53864004 | None:intergenic | 45.0% |
| CATCCAATGGGAAAAGCCTA+TGG | + | chr1_3:53863983-53864002 | Msa0125370:CDS | 45.0% | |
| ATGCAAGCACACATGAAGTG+AGG | + | chr1_3:53864118-53864137 | Msa0125370:intron | 45.0% | |
| AGAGCTGTGATGCATTACGA+AGG | + | chr1_3:53864257-53864276 | Msa0125370:intron | 45.0% | |
| AACAGGAAAAGCAAGCCAGT+TGG | - | chr1_3:53864641-53864660 | None:intergenic | 45.0% | |
| GTTACCTGAGCCTTTCTAGA+GGG | - | chr1_3:53864767-53864786 | None:intergenic | 45.0% | |
| GGCGAAGTGATGAATCTATG+AGG | - | chr1_3:53864850-53864869 | None:intergenic | 45.0% | |
| ! | CTCTAGAGACTTCTAGAAGC+TGG | - | chr1_3:53865029-53865048 | None:intergenic | 45.0% |
| GACTTAAGCCCCAAGTAATG+AGG | - | chr1_3:53865074-53865093 | None:intergenic | 45.0% | |
| ACAGGCTATAAATACCACCC+TGG | + | chr1_3:53865113-53865132 | Msa0125370:intron | 45.0% | |
| ATCAAGGTCGTAGCACGTTT+GGG | - | chr1_3:53865213-53865232 | None:intergenic | 45.0% | |
| GAAGGAAGAAGAAGTGAAGG+AGG | + | chr1_3:53865295-53865314 | Msa0125370:intron | 45.0% | |
| GGTAGATCTGAGAGATAGAG+AGG | + | chr1_3:53865350-53865369 | Msa0125370:intron | 45.0% | |
| AACTCCAAGAAGGGACATAC+AGG | - | chr1_3:53865624-53865643 | None:intergenic | 45.0% | |
| AACGAGTTCCTACGTAGGAA+CGG | - | chr1_3:53865860-53865879 | None:intergenic | 45.0% | |
| GCCTTGAGAACAATGTAGTC+AGG | - | chr1_3:53865883-53865902 | None:intergenic | 45.0% | |
| CATGGGAAAAGGAGAGTTGT+TGG | + | chr1_3:53866074-53866093 | Msa0125370:intron | 45.0% | |
| TTGGCCTGCAGTGAAAAGAA+AGG | - | chr1_3:53866131-53866150 | None:intergenic | 45.0% | |
| TTCTGATGTGTCTGACTCTC+TGG | + | chr1_3:53866313-53866332 | Msa0125370:CDS | 45.0% | |
| AGAAGTTCATCCTCCAACTG+AGG | + | chr1_3:53866412-53866431 | Msa0125370:CDS | 45.0% | |
| TTGTTACAAGCCTCAGTTGG+AGG | - | chr1_3:53866425-53866444 | None:intergenic | 45.0% | |
| CCTTTGTTACAAGCCTCAGT+TGG | - | chr1_3:53866428-53866447 | None:intergenic | 45.0% | |
| CCAACTGAGGCTTGTAACAA+AGG | + | chr1_3:53866425-53866444 | Msa0125370:CDS | 45.0% | |
| ! | GAGGCTTGTAACAAAGGCAT+AGG | + | chr1_3:53866431-53866450 | Msa0125370:CDS | 45.0% |
| ATAGCATCATGTGACACTGG+TGG | + | chr1_3:53866733-53866752 | Msa0125370:CDS | 45.0% | |
| AAAATAGATGGTCGGCCATC+TGG | + | chr1_3:53866766-53866785 | Msa0125370:CDS | 45.0% | |
| CAAAGAGTCTGGAAGTGGAA+AGG | + | chr1_3:53866816-53866835 | Msa0125370:CDS | 45.0% | |
| GCTGGAAAAAATGAGTCCGA+GGG | + | chr1_3:53866838-53866857 | Msa0125370:CDS | 45.0% | |
| CTCCTTGCTTCAATGTTGTG+TGG | + | chr1_3:53867044-53867063 | Msa0125370:intron | 45.0% | |
| GTGGATCCCCCTACTTTAAA+TGG | + | chr1_3:53867224-53867243 | Msa0125370:intron | 45.0% | |
| ! | TTCCATCTTGTTTGCACCAC+CGG | + | chr1_3:53867403-53867422 | Msa0125370:intron | 45.0% |
| TGTACATCTGTCTAGGCCTT+TGG | - | chr1_3:53867480-53867499 | None:intergenic | 45.0% | |
| !!! | TCAGATTCTTTTTGGGGTGG+TGG | - | chr1_3:53867534-53867553 | None:intergenic | 45.0% |
| !! | GCCTTGTTGTTGTTAGGTGA+AGG | + | chr1_3:53867676-53867695 | Msa0125370:intron | 45.0% |
| GCCTTCACCTAACAACAACA+AGG | - | chr1_3:53867680-53867699 | None:intergenic | 45.0% | |
| ! | TTCTAATGGATAGGACGAGG+AGG | + | chr1_3:53867788-53867807 | Msa0125370:intron | 45.0% |
| CCCAACATCAAAGACGAAGT+TGG | + | chr1_3:53867831-53867850 | Msa0125370:CDS | 45.0% | |
| CCCAACTTCGTCTTTGATGT+TGG | - | chr1_3:53867835-53867854 | None:intergenic | 45.0% | |
| ! | AGTTGTAACTTGTGAGGCAG+AGG | - | chr1_3:53868045-53868064 | None:intergenic | 45.0% |
| ! | GGACGAAGTTGTAACTTGTG+AGG | - | chr1_3:53868051-53868070 | None:intergenic | 45.0% |
| GTTTGAACCATTGAGACCAC+AGG | - | chr1_3:53868191-53868210 | None:intergenic | 45.0% | |
| AGGAACATGACTATGAGTGG+CGG | - | chr1_3:53868273-53868292 | None:intergenic | 45.0% | |
| CCCCATGATAGCATTTCTGT+AGG | - | chr1_3:53868300-53868319 | None:intergenic | 45.0% | |
| TGAACACGACGAGCTAGAAT+GGG | - | chr1_3:53868354-53868373 | None:intergenic | 45.0% | |
| AAAGATTGGCGATGACACCA+AGG | - | chr1_3:53868413-53868432 | None:intergenic | 45.0% | |
| GAAACTAATGCTGTCCAGTG+TGG | + | chr1_3:53868457-53868476 | Msa0125370:intron | 45.0% | |
| TCCTGTGTTCTCAAGCCAAA+GGG | - | chr1_3:53868487-53868506 | None:intergenic | 45.0% | |
| ATCCTGTGTTCTCAAGCCAA+AGG | - | chr1_3:53868488-53868507 | None:intergenic | 45.0% | |
| GCCACTACACAGTAGATCTA+TGG | + | chr1_3:53868618-53868637 | Msa0125370:CDS | 45.0% | |
| CCCATAGATCTACTGTGTAG+TGG | - | chr1_3:53868622-53868641 | None:intergenic | 45.0% | |
| CAGTATGCTCATCATCAAGC+AGG | - | chr1_3:53868735-53868754 | None:intergenic | 45.0% | |
| GGATTCGAGTGTCTGAGAAA+TGG | + | chr1_3:53868781-53868800 | Msa0125370:CDS | 45.0% | |
| ATTCAGCTTTCCTGGAGACT+TGG | + | chr1_3:53868825-53868844 | Msa0125370:CDS | 45.0% | |
| TCATTTGCATCCAAGTCTCC+AGG | - | chr1_3:53868838-53868857 | None:intergenic | 45.0% | |
| TTGGATGCAAATGATGACCG+CGG | + | chr1_3:53868844-53868863 | Msa0125370:CDS | 45.0% | |
| CTCGGAATCCATGATCATGA+TGG | - | chr1_3:53868912-53868931 | None:intergenic | 45.0% | |
| CATCATGATCATGGATTCCG+AGG | + | chr1_3:53868910-53868929 | Msa0125370:CDS | 45.0% | |
| ATGATCATGGATTCCGAGGA+GGG | + | chr1_3:53868914-53868933 | Msa0125370:CDS | 45.0% | |
| ! | AAGGCATGCTAGTAACTTGC+GGG | - | chr1_3:53868984-53869003 | None:intergenic | 45.0% |
| CATGCCTTATGTCAATGGAC+AGG | + | chr1_3:53868996-53869015 | Msa0125370:CDS | 45.0% | |
| GATTACAAACCAATGGCAGG+TGG | + | chr1_3:53869029-53869048 | Msa0125370:CDS | 45.0% | |
| ATACAATAGATCAGGACCCG+TGG | - | chr1_3:53869055-53869074 | None:intergenic | 45.0% | |
| GGTCCTGATCTATTGTATGC+AGG | + | chr1_3:53869057-53869076 | Msa0125370:CDS | 45.0% | |
| ACTGTATTCAGGCCCTCAAA+TGG | + | chr1_3:53869159-53869178 | Msa0125370:CDS | 45.0% | |
| !!! | CAAATTTTTTATTTTTTTTA+TGG | + | chr1_3:53865247-53865266 | Msa0125370:intron | 5.0% |
| !!! | TTATTTTTATTTTTTTTGAA+CGG | - | chr1_3:53865710-53865729 | None:intergenic | 5.0% |
| TGGGGGAATTTGTGGGAGTT+AGG | + | chr1_3:53860653-53860672 | Msa0125370:intron | 50.0% | |
| GTCTCACAGAATTAGGGCGT+AGG | + | chr1_3:53861270-53861289 | Msa0125370:CDS | 50.0% | |
| CTCCCGGACAGACAAAATTC+AGG | - | chr1_3:53861409-53861428 | None:intergenic | 50.0% | |
| !! | AAACCGGCTTGTAAGGTGAG+GGG | - | chr1_3:53861880-53861899 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1_3:53861882-53861901 | None:intergenic | 50.0% |
| TTGTGGATGGCCCAATCGAT+AGG | - | chr1_3:53861950-53861969 | None:intergenic | 50.0% | |
| ATCCATGCAACAAGCCCAAC+AGG | + | chr1_3:53861975-53861994 | Msa0125370:intron | 50.0% | |
| AGTGAACTCACCTTACCAGC+CGG | + | chr1_3:53862077-53862096 | Msa0125370:intron | 50.0% | |
| !! | TGGTATCCTGACTTGGAGAG+GGG | + | chr1_3:53862342-53862361 | Msa0125370:intron | 50.0% |
| !! | TCCGTGAAGAAGAGGCATCA+TGG | + | chr1_3:53862834-53862853 | Msa0125370:CDS | 50.0% |
| GCCATGATGCCTCTTCTTCA+CGG | - | chr1_3:53862838-53862857 | None:intergenic | 50.0% | |
| GGGTGGAGTTAGTACCATCT+TGG | - | chr1_3:53863299-53863318 | None:intergenic | 50.0% | |
| GCACAACTTACACTCAGGAC+TGG | - | chr1_3:53863366-53863385 | None:intergenic | 50.0% | |
| GAAGCATGGTTTCACGTGGT+TGG | - | chr1_3:53863480-53863499 | None:intergenic | 50.0% | |
| CAAAACGAGCTCAAGAAGCC+AGG | - | chr1_3:53863593-53863612 | None:intergenic | 50.0% | |
| ! | GGCTTCTTGAGCTCGTTTTG+AGG | + | chr1_3:53863593-53863612 | Msa0125370:intron | 50.0% |
| ! | GGTCTGAACACCCTCTAGAA+AGG | + | chr1_3:53864754-53864773 | Msa0125370:intron | 50.0% |
| ! | AACACCCTCTAGAAAGGCTC+AGG | + | chr1_3:53864760-53864779 | Msa0125370:intron | 50.0% |
| GGTTACCTGAGCCTTTCTAG+AGG | - | chr1_3:53864768-53864787 | None:intergenic | 50.0% | |
| !! | AAGGGCATTTGTCCTTCGAG+AGG | - | chr1_3:53864789-53864808 | None:intergenic | 50.0% |
| TTGTCCCAAAGCTCGTGCTT+GGG | + | chr1_3:53864870-53864889 | Msa0125370:intron | 50.0% | |
| TGGAGGGTCTCTAAGTCCTT+AGG | - | chr1_3:53864919-53864938 | None:intergenic | 50.0% | |
| AAGGACTTAGAGACCCTCCA+AGG | + | chr1_3:53864919-53864938 | Msa0125370:intron | 50.0% | |
| AGGACTTAGAGACCCTCCAA+GGG | + | chr1_3:53864920-53864939 | Msa0125370:intron | 50.0% | |
| AGGCCTTTATGAGGGGTTCT+GGG | - | chr1_3:53864947-53864966 | None:intergenic | 50.0% | |
| ! | AGACTTCTAGAAGCTGGCTG+AGG | - | chr1_3:53865023-53865042 | None:intergenic | 50.0% |
| CGAGAAACCAAGCCCATAAC+AGG | + | chr1_3:53865095-53865114 | Msa0125370:intron | 50.0% | |
| GATCAAGGTCGTAGCACGTT+TGG | - | chr1_3:53865214-53865233 | None:intergenic | 50.0% | |
| AACGTGCTACGACCTTGATC+TGG | + | chr1_3:53865214-53865233 | Msa0125370:intron | 50.0% | |
| ACGTGCTACGACCTTGATCT+GGG | + | chr1_3:53865215-53865234 | Msa0125370:intron | 50.0% | |
| TGCAAACACGACCCAGATCA+AGG | - | chr1_3:53865229-53865248 | None:intergenic | 50.0% | |
| AGAGTTCAGATGGATGTGGC+AGG | + | chr1_3:53865394-53865413 | Msa0125370:intron | 50.0% | |
| AGTGCCTGTATGTCCCTTCT+TGG | + | chr1_3:53865617-53865636 | Msa0125370:intron | 50.0% | |
| ! | TTAGCTTTCGTCGCGTCTTG+CGG | + | chr1_3:53865661-53865680 | Msa0125370:intron | 50.0% |
| GATGAAGGGACGTAAGATCG+AGG | - | chr1_3:53865831-53865850 | None:intergenic | 50.0% | |
| AGTTCCTACGTAGGAACGGT+GGG | - | chr1_3:53865856-53865875 | None:intergenic | 50.0% | |
| TCAGGAACGAGTTCCTACGT+AGG | - | chr1_3:53865865-53865884 | None:intergenic | 50.0% | |
| CACTGCAGGCCAAACAAAAG+CGG | + | chr1_3:53866138-53866157 | Msa0125370:intron | 50.0% | |
| AGTAAAGGACAAAGGGAGGG+AGG | + | chr1_3:53866172-53866191 | Msa0125370:CDS | 50.0% | |
| AGGACTACTATGGCTGTGCA+TGG | + | chr1_3:53866197-53866216 | Msa0125370:CDS | 50.0% | |
| GGACTACTATGGCTGTGCAT+GGG | + | chr1_3:53866198-53866217 | Msa0125370:CDS | 50.0% | |
| GGGACGAACCAAGAAGACAA+TGG | + | chr1_3:53866218-53866237 | Msa0125370:CDS | 50.0% | |
| GATGTGTCTGACTCTCTGGA+TGG | + | chr1_3:53866317-53866336 | Msa0125370:CDS | 50.0% | |
| TTGCCTGCTAGGTGACTTCT+GGG | - | chr1_3:53866605-53866624 | None:intergenic | 50.0% | |
| GGCATAGCATCATGTGACAC+TGG | + | chr1_3:53866730-53866749 | Msa0125370:CDS | 50.0% | |
| CATCATGTGACACTGGTGGT+TGG | + | chr1_3:53866737-53866756 | Msa0125370:CDS | 50.0% | |
| GGCTGGAAAAAATGAGTCCG+AGG | + | chr1_3:53866837-53866856 | Msa0125370:CDS | 50.0% | |
| CAATGTGACAACAGCACCCT+CGG | - | chr1_3:53866857-53866876 | None:intergenic | 50.0% | |
| !! | GGGTGCTGTTGTCACATTGA+AGG | + | chr1_3:53866858-53866877 | Msa0125370:CDS | 50.0% |
| GGCCACACAACATTGAAGCA+AGG | - | chr1_3:53867049-53867068 | None:intergenic | 50.0% | |
| ! | TCCATCTTGTTTGCACCACC+GGG | + | chr1_3:53867404-53867423 | Msa0125370:intron | 50.0% |
| !! | CATTGTTGATTTGTCCCCGG+TGG | - | chr1_3:53867422-53867441 | None:intergenic | 50.0% |
| !!! | GATTCTTTTTGGGGTGGTGG+TGG | - | chr1_3:53867531-53867550 | None:intergenic | 50.0% |
| ATTTGACCAGGCGAGCTACT+AGG | - | chr1_3:53867921-53867940 | None:intergenic | 50.0% | |
| ACTTGTGAGGCAGAGGTGAA+GGG | - | chr1_3:53868038-53868057 | None:intergenic | 50.0% | |
| AACTTGTGAGGCAGAGGTGA+AGG | - | chr1_3:53868039-53868058 | None:intergenic | 50.0% | |
| ATTGAGACCACAGGAGCAGT+TGG | - | chr1_3:53868182-53868201 | None:intergenic | 50.0% | |
| AACTGCTCCTGTGGTCTCAA+TGG | + | chr1_3:53868181-53868200 | Msa0125370:CDS | 50.0% | |
| GGAACATGACTATGAGTGGC+GGG | - | chr1_3:53868272-53868291 | None:intergenic | 50.0% | |
| CTGAACACGACGAGCTAGAA+TGG | - | chr1_3:53868355-53868374 | None:intergenic | 50.0% | |
| !! | CATTCTAGCTCGTCGTGTTC+AGG | + | chr1_3:53868353-53868372 | Msa0125370:CDS | 50.0% |
| !! | TCCCTTTGGCTTGAGAACAC+AGG | + | chr1_3:53868483-53868502 | Msa0125370:CDS | 50.0% |
| GGGCTGATCATACATGCTTC+TGG | - | chr1_3:53868560-53868579 | None:intergenic | 50.0% | |
| ATACTGTTGGAAAGACGGCC+AGG | + | chr1_3:53868749-53868768 | Msa0125370:CDS | 50.0% | |
| TACTGTTGGAAAGACGGCCA+GGG | + | chr1_3:53868750-53868769 | Msa0125370:CDS | 50.0% | |
| CATGATCATGGATTCCGAGG+AGG | + | chr1_3:53868913-53868932 | Msa0125370:CDS | 50.0% | |
| ! | GAGGGTATAGCTCATCCCAT+GGG | + | chr1_3:53868932-53868951 | Msa0125370:CDS | 50.0% |
| !! | GTCCTGTTGGGCTTGTTGCA+TGG | - | chr1_3:53861980-53861999 | None:intergenic | 55.0% |
| TGCAACAAGCCCAACAGGAC+TGG | + | chr1_3:53861980-53861999 | Msa0125370:intron | 55.0% | |
| !! | GGTATCCTGACTTGGAGAGG+GGG | + | chr1_3:53862343-53862362 | Msa0125370:intron | 55.0% |
| AGTATCCCCCTCTCCAAGTC+AGG | - | chr1_3:53862351-53862370 | None:intergenic | 55.0% | |
| ! | GAGGCATCATGGCAAGCTGA+AGG | + | chr1_3:53862845-53862864 | Msa0125370:CDS | 55.0% |
| AGGCTCAGGTAACCTCTCGA+AGG | + | chr1_3:53864774-53864793 | Msa0125370:intron | 55.0% | |
| !! | CAAGCACGAGCTTTGGGACA+AGG | - | chr1_3:53864871-53864890 | None:intergenic | 55.0% |
| CTTGTCCCAAAGCTCGTGCT+TGG | + | chr1_3:53864869-53864888 | Msa0125370:intron | 55.0% | |
| TGTCCCAAAGCTCGTGCTTG+GGG | + | chr1_3:53864871-53864890 | Msa0125370:intron | 55.0% | |
| GGACCCAGAACCCCTCATAA+AGG | + | chr1_3:53864941-53864960 | Msa0125370:intron | 55.0% | |
| CAGGCCTTTATGAGGGGTTC+TGG | - | chr1_3:53864948-53864967 | None:intergenic | 55.0% | |
| GGCGTTCAGGCCTTTATGAG+GGG | - | chr1_3:53864954-53864973 | None:intergenic | 55.0% | |
| GGGCGTTCAGGCCTTTATGA+GGG | - | chr1_3:53864955-53864974 | None:intergenic | 55.0% | |
| ! | AGGGCGTTCAGGCCTTTATG+AGG | - | chr1_3:53864956-53864975 | None:intergenic | 55.0% |
| ! | CTTCTAGAAGCTGGCTGAGG+CGG | - | chr1_3:53865020-53865039 | None:intergenic | 55.0% |
| CTGCTTGAGAAGGCTCTCCA+GGG | - | chr1_3:53865133-53865152 | None:intergenic | 55.0% | |
| CTGGAGAGCCTTCTCAAGCA+GGG | + | chr1_3:53865132-53865151 | Msa0125370:intron | 55.0% | |
| ATCGTGCGATCCTACGTGCT+GGG | - | chr1_3:53865173-53865192 | None:intergenic | 55.0% | |
| AGGTCGTAGCACGTTTGGGT+GGG | - | chr1_3:53865209-53865228 | None:intergenic | 55.0% | |
| AAGGTCGTAGCACGTTTGGG+TGG | - | chr1_3:53865210-53865229 | None:intergenic | 55.0% | |
| !! | AGGAACGGTGGGCTGATGAA+GGG | - | chr1_3:53865845-53865864 | None:intergenic | 55.0% |
| !! | TAGGAACGGTGGGCTGATGA+AGG | - | chr1_3:53865846-53865865 | None:intergenic | 55.0% |
| GAGTTCCTACGTAGGAACGG+TGG | - | chr1_3:53865857-53865876 | None:intergenic | 55.0% | |
| GAGGGAGGAGAGGACTACTA+TGG | + | chr1_3:53866187-53866206 | Msa0125370:CDS | 55.0% | |
| AAGCCCAGAAGTCACCTAGC+AGG | + | chr1_3:53866599-53866618 | Msa0125370:intron | 55.0% | |
| CTTGCCTGCTAGGTGACTTC+TGG | - | chr1_3:53866606-53866625 | None:intergenic | 55.0% | |
| GAGTCTGGAAGTGGAAAGGC+TGG | + | chr1_3:53866820-53866839 | Msa0125370:CDS | 55.0% | |
| ! | CCATCTTGTTTGCACCACCG+GGG | + | chr1_3:53867405-53867424 | Msa0125370:intron | 55.0% |
| GGAGGACTGACAGGTGAAGA+TGG | - | chr1_3:53867900-53867919 | None:intergenic | 55.0% | |
| GAGCTACTAGGAGGACTGAC+AGG | - | chr1_3:53867909-53867928 | None:intergenic | 55.0% | |
| TTGTGAGGCAGAGGTGAAGG+GGG | - | chr1_3:53868036-53868055 | None:intergenic | 55.0% | |
| CTTGTGAGGCAGAGGTGAAG+GGG | - | chr1_3:53868037-53868056 | None:intergenic | 55.0% | |
| !! | CTCCTTTGGTTTCTGGTCCC+AGG | + | chr1_3:53868156-53868175 | Msa0125370:CDS | 55.0% |
| GCACTCATTGAGCGTGCAAG+TGG | - | chr1_3:53868221-53868240 | None:intergenic | 55.0% | |
| GTGAGGGATCAGGACCTAAC+CGG | - | chr1_3:53868250-53868269 | None:intergenic | 55.0% | |
| !! | TGACTATGAGTGGCGGGTGA+GGG | - | chr1_3:53868266-53868285 | None:intergenic | 55.0% |
| !! | ATGACTATGAGTGGCGGGTG+AGG | - | chr1_3:53868267-53868286 | None:intergenic | 55.0% |
| CGAGCTAGAATGGGTCAGAC+TGG | - | chr1_3:53868345-53868364 | None:intergenic | 55.0% | |
| GTCCAGTGTGGTGTTCCCTT+TGG | + | chr1_3:53868469-53868488 | Msa0125370:intron | 55.0% | |
| AGCCAAAGGGAACACCACAC+TGG | - | chr1_3:53868474-53868493 | None:intergenic | 55.0% | |
| AGCATGTATGATCAGCCCGC+TGG | + | chr1_3:53868562-53868581 | Msa0125370:CDS | 55.0% | |
| CAACGCTTGATTCTGACGCC+CGG | - | chr1_3:53868677-53868696 | None:intergenic | 55.0% | |
| !! | GCGTCAGAATCAAGCGTTGG+TGG | + | chr1_3:53868678-53868697 | Msa0125370:CDS | 55.0% |
| AAAGACGGCCAGGGCAAGTT+TGG | + | chr1_3:53868759-53868778 | Msa0125370:CDS | 55.0% | |
| AAGACGGCCAGGGCAAGTTT+GGG | + | chr1_3:53868760-53868779 | Msa0125370:CDS | 55.0% | |
| CTCGAATCCCAAACTTGCCC+TGG | - | chr1_3:53868770-53868789 | None:intergenic | 55.0% | |
| AAGAACTGGTCGAGGATCCG+CGG | - | chr1_3:53868864-53868883 | None:intergenic | 55.0% | |
| GATCCTCGACCAGTTCTTGC+AGG | + | chr1_3:53868866-53868885 | Msa0125370:CDS | 55.0% | |
| GGGATGAGCTATACCCTCCT+CGG | - | chr1_3:53868930-53868949 | None:intergenic | 55.0% | |
| ! | GGAGGGTATAGCTCATCCCA+TGG | + | chr1_3:53868931-53868950 | Msa0125370:CDS | 55.0% |
| AAACCAATGGCAGGTGGCCA+CGG | + | chr1_3:53869035-53869054 | Msa0125370:CDS | 55.0% | |
| GCACCCCTCACCTTACAAGC+CGG | + | chr1_3:53861874-53861893 | Msa0125370:intron | 60.0% | |
| GTCCCAAAGCTCGTGCTTGG+GGG | + | chr1_3:53864872-53864891 | Msa0125370:intron | 60.0% | |
| TCCCAAAGCTCGTGCTTGGG+GGG | + | chr1_3:53864873-53864892 | Msa0125370:intron | 60.0% | |
| !! | ATGAGGGGTTCTGGGTCCCT+TGG | - | chr1_3:53864939-53864958 | None:intergenic | 60.0% |
| AGGCCTGAACGCCCTCCAAA+AGG | + | chr1_3:53864961-53864980 | Msa0125370:intron | 60.0% | |
| GGCCTGAACGCCCTCCAAAA+GGG | + | chr1_3:53864962-53864981 | Msa0125370:intron | 60.0% | |
| ! | CTTAGGCCTCGAGGCCCTTT+TGG | - | chr1_3:53864979-53864998 | None:intergenic | 60.0% |
| CAAAAGGGCCTCGAGGCCTA+AGG | + | chr1_3:53864977-53864996 | Msa0125370:intron | 60.0% | |
| CTTGAGAAGGCTCTCCAGGG+TGG | - | chr1_3:53865130-53865149 | None:intergenic | 60.0% | |
| CCTGCTTGAGAAGGCTCTCC+AGG | - | chr1_3:53865134-53865153 | None:intergenic | 60.0% | |
| CCTGGAGAGCCTTCTCAAGC+AGG | + | chr1_3:53865131-53865150 | Msa0125370:intron | 60.0% | |
| CCTGGCTACCCTGCTTGAGA+AGG | - | chr1_3:53865143-53865162 | None:intergenic | 60.0% | |
| CCTTCTCAAGCAGGGTAGCC+AGG | + | chr1_3:53865140-53865159 | Msa0125370:intron | 60.0% | |
| TACGTGCTGGGACTCGATCC+TGG | - | chr1_3:53865161-53865180 | None:intergenic | 60.0% | |
| AGGATCGAGTCCCAGCACGT+AGG | + | chr1_3:53865160-53865179 | Msa0125370:intron | 60.0% | |
| GATCGTGCGATCCTACGTGC+TGG | - | chr1_3:53865174-53865193 | None:intergenic | 60.0% | |
| GGTCGTAGCACGTTTGGGTG+GGG | - | chr1_3:53865208-53865227 | None:intergenic | 60.0% | |
| ! | TGTGGCAGGCGCTGTGTTTG+AGG | + | chr1_3:53865408-53865427 | Msa0125370:intron | 60.0% |
| TCAGCCCACCGTTCCTACGT+AGG | + | chr1_3:53865849-53865868 | Msa0125370:intron | 60.0% | |
| AGGACAAAGGGAGGGAGGAG+AGG | + | chr1_3:53866177-53866196 | Msa0125370:CDS | 60.0% | |
| GCATCTGCTGCAGCACCAGA+TGG | - | chr1_3:53866784-53866803 | None:intergenic | 60.0% | |
| !! | TCTGGTGCTGCAGCAGATGC+TGG | + | chr1_3:53866784-53866803 | Msa0125370:CDS | 60.0% |
| !! | CTGGTGCTGCAGCAGATGCT+GGG | + | chr1_3:53866785-53866804 | Msa0125370:CDS | 60.0% |
| !! | TGGTGCTGCAGCAGATGCTG+GGG | + | chr1_3:53866786-53866805 | Msa0125370:CDS | 60.0% |
| CCCCGGTGGTGCAAACAAGA+TGG | - | chr1_3:53867408-53867427 | None:intergenic | 60.0% | |
| AGTCCTCCTAGTAGCTCGCC+TGG | + | chr1_3:53867912-53867931 | Msa0125370:CDS | 60.0% | |
| TGACCAGGCGAGCTACTAGG+AGG | - | chr1_3:53867918-53867937 | None:intergenic | 60.0% | |
| TGTGAGGCAGAGGTGAAGGG+GGG | - | chr1_3:53868035-53868054 | None:intergenic | 60.0% | |
| GGCCTGGGACCAGAAACCAA+AGG | - | chr1_3:53868161-53868180 | None:intergenic | 60.0% | |
| ! | ACCACAGGAGCAGTTGGCCT+GGG | - | chr1_3:53868176-53868195 | None:intergenic | 60.0% |
| GCACGCTCAATGAGTGCAGC+TGG | + | chr1_3:53868224-53868243 | Msa0125370:CDS | 60.0% | |
| GCTCAATGAGTGCAGCTGGC+CGG | + | chr1_3:53868228-53868247 | Msa0125370:CDS | 60.0% | |
| ATGAGTGCAGCTGGCCGGTT+AGG | + | chr1_3:53868233-53868252 | Msa0125370:CDS | 60.0% | |
| GGTCAGACTGGCAGCAGTTG+AGG | - | chr1_3:53868333-53868352 | None:intergenic | 60.0% | |
| GAGTTCCCAGCCTGCACATC+CGG | + | chr1_3:53868655-53868674 | Msa0125370:CDS | 60.0% | |
| AGTTCCCAGCCTGCACATCC+GGG | + | chr1_3:53868656-53868675 | Msa0125370:CDS | 60.0% | |
| ATTCTGACGCCCGGATGTGC+AGG | - | chr1_3:53868668-53868687 | None:intergenic | 60.0% | |
| CGGGCGTCAGAATCAAGCGT+TGG | + | chr1_3:53868675-53868694 | Msa0125370:CDS | 60.0% | |
| GAGCCTGCAAGAACTGGTCG+AGG | - | chr1_3:53868872-53868891 | None:intergenic | 60.0% | |
| ACGCTCGAGCCTGCAAGAAC+TGG | - | chr1_3:53868878-53868897 | None:intergenic | 60.0% | |
| AACCAATGGCAGGTGGCCAC+GGG | + | chr1_3:53869036-53869055 | Msa0125370:CDS | 60.0% | |
| GCCCCCCAAGCACGAGCTTT+GGG | - | chr1_3:53864877-53864896 | None:intergenic | 65.0% | |
| AGCCCCCCAAGCACGAGCTT+TGG | - | chr1_3:53864878-53864897 | None:intergenic | 65.0% | |
| !! | GGGGTTCTGGGTCCCTTGGA+GGG | - | chr1_3:53864935-53864954 | None:intergenic | 65.0% |
| !! | AGGGGTTCTGGGTCCCTTGG+AGG | - | chr1_3:53864936-53864955 | None:intergenic | 65.0% |
| !!! | GGCCCTTTTGGAGGGCGTTC+AGG | - | chr1_3:53864967-53864986 | None:intergenic | 65.0% |
| ! | GGCCTCGAGGCCCTTTTGGA+GGG | - | chr1_3:53864975-53864994 | None:intergenic | 65.0% |
| ! | AGGCCTCGAGGCCCTTTTGG+AGG | - | chr1_3:53864976-53864995 | None:intergenic | 65.0% |
| GCCTAAGGCGCGCCCTTCTT+GGG | + | chr1_3:53864992-53865011 | Msa0125370:intron | 65.0% | |
| CCTAAGGCGCGCCCTTCTTG+GGG | + | chr1_3:53864993-53865012 | Msa0125370:intron | 65.0% | |
| CTAAGGCGCGCCCTTCTTGG+GGG | + | chr1_3:53864994-53865013 | Msa0125370:intron | 65.0% | |
| TTTCGTCGCGTCTTGCGGCG+TGG | + | chr1_3:53865666-53865685 | Msa0125370:intron | 65.0% | |
| GCAGAGGTGAAGGGGGGAGA+TGG | - | chr1_3:53868029-53868048 | None:intergenic | 65.0% | |
| TCCCAGGCCAACTGCTCCTG+TGG | + | chr1_3:53868172-53868191 | Msa0125370:CDS | 65.0% | |
| GACCACAGGAGCAGTTGGCC+TGG | - | chr1_3:53868177-53868196 | None:intergenic | 65.0% | |
| !! | TGAGTGGCGGGTGAGGGATC+AGG | - | chr1_3:53868260-53868279 | None:intergenic | 65.0% |
| CGCCCTCCAAAAGGGCCTCG+AGG | + | chr1_3:53864970-53864989 | Msa0125370:intron | 70.0% | |
| GGCCTAAGGCGCGCCCTTCT+TGG | + | chr1_3:53864991-53865010 | Msa0125370:intron | 70.0% | |
| ! | CCCCAAGAAGGGCGCGCCTT+AGG | - | chr1_3:53864996-53865015 | None:intergenic | 70.0% |
| GCTGAGGCGGCCCCCAAGAA+GGG | - | chr1_3:53865007-53865026 | None:intergenic | 70.0% | |
| GACGCCCGGATGTGCAGGCT+GGG | - | chr1_3:53868663-53868682 | None:intergenic | 70.0% | |
| TGACGCCCGGATGTGCAGGC+TGG | - | chr1_3:53868664-53868683 | None:intergenic | 70.0% | |
| GACCCGTGGCCACCTGCCAT+TGG | - | chr1_3:53869041-53869060 | None:intergenic | 70.0% | |
| AGGGCGCGCCTTAGGCCTCG+AGG | - | chr1_3:53864988-53865007 | None:intergenic | 75.0% | |
| GGCTGAGGCGGCCCCCAAGA+AGG | - | chr1_3:53865008-53865027 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 53860304 | 53869188 | 53860304 | ID=Msa0125370;Name=Msa0125370 |
| chr1_3 | mRNA | 53860304 | 53869188 | 53860304 | ID=Msa0125370-mRNA-1;Parent=Msa0125370;Name=Msa0125370-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|0.75|1|1|8|0|726 |
| chr1_3 | exon | 53860304 | 53860306 | 53860304 | ID=Msa0125370-mRNA-1:exon:16491;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53861215 | 53861327 | 53861215 | ID=Msa0125370-mRNA-1:exon:16492;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53862775 | 53862924 | 53862775 | ID=Msa0125370-mRNA-1:exon:16493;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53863920 | 53864004 | 53863920 | ID=Msa0125370-mRNA-1:exon:16494;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53866146 | 53866483 | 53866146 | ID=Msa0125370-mRNA-1:exon:16495;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53866717 | 53866918 | 53866717 | ID=Msa0125370-mRNA-1:exon:16496;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53867801 | 53868376 | 53867801 | ID=Msa0125370-mRNA-1:exon:16497;Parent=Msa0125370-mRNA-1 |
| chr1_3 | exon | 53868475 | 53869188 | 53868475 | ID=Msa0125370-mRNA-1:exon:16498;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53860304 | 53860306 | 53860304 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53861215 | 53861327 | 53861215 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53862775 | 53862924 | 53862775 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53863920 | 53864004 | 53863920 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53866146 | 53866483 | 53866146 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53866717 | 53866918 | 53866717 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53867801 | 53868376 | 53867801 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| chr1_3 | CDS | 53868475 | 53869188 | 53868475 | ID=Msa0125370-mRNA-1:cds;Parent=Msa0125370-mRNA-1 |
| Gene Sequence |
| Protein sequence |