Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130670 | KEH24676.1 | 95.556 | 270 | 7 | 1 | 1 | 270 | 1 | 265 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130670 | sp|O80567|LRP6B_ARATH | 70.199 | 151 | 44 | 1 | 121 | 270 | 195 | 345 | 3.51e-65 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130670 | A0A072U5M9 | 95.556 | 270 | 7 | 1 | 1 | 270 | 1 | 265 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa1130670 | -0.820232 | 7.648393e-53 | -8.615850e-47 |
| Msa0055150 | Msa1130670 | -0.820001 | 8.637789e-53 | -8.615850e-47 |
| Msa0097990 | Msa1130670 | -0.803171 | 3.959634e-49 | -8.615850e-47 |
| Msa0120370 | Msa1130670 | 0.802165 | 6.386757e-49 | -8.615850e-47 |
| Msa0647930 | Msa1130670 | -0.803882 | 2.819091e-49 | -8.615850e-47 |
| Msa0716420 | Msa1130670 | 0.807167 | 5.769124e-50 | -8.615850e-47 |
| Msa0735620 | Msa1130670 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
| Msa0764690 | Msa1130670 | -0.822339 | 2.497772e-53 | -8.615850e-47 |
| Msa0797080 | Msa1130670 | 0.828390 | 9.232189e-55 | -8.615850e-47 |
| Msa0799010 | Msa1130670 | 0.815546 | 8.745765e-52 | -8.615850e-47 |
| Msa0814630 | Msa1130670 | 0.819093 | 1.391845e-52 | -8.615850e-47 |
| Msa0128650 | Msa1130670 | -0.820191 | 7.813811e-53 | -8.615850e-47 |
| Msa0140170 | Msa1130670 | -0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0208810 | Msa1130670 | -0.803785 | 2.952928e-49 | -8.615850e-47 |
| Msa0410300 | Msa1130670 | -0.801869 | 7.346293e-49 | -8.615850e-47 |
| Msa0461590 | Msa1130670 | -0.816333 | 5.838790e-52 | -8.615850e-47 |
| Msa1002600 | Msa1130670 | 0.816337 | 5.824878e-52 | -8.615850e-47 |
| Msa1025260 | Msa1130670 | -0.811003 | 8.698197e-51 | -8.615850e-47 |
| Msa1028760 | Msa1130670 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa1067890 | Msa1130670 | 0.819425 | 1.169129e-52 | -8.615850e-47 |
| Msa1072530 | Msa1130670 | 0.803628 | 3.183681e-49 | -8.615850e-47 |
| Msa1081560 | Msa1130670 | -0.809872 | 1.526151e-50 | -8.615850e-47 |
| Msa1100530 | Msa1130670 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa0264530 | Msa1130670 | -0.837501 | 5.007592e-57 | -8.615850e-47 |
| Msa0295000 | Msa1130670 | 0.827498 | 1.513049e-54 | -8.615850e-47 |
| Msa1109350 | Msa1130670 | -0.814922 | 1.203951e-51 | -8.615850e-47 |
| Msa1127130 | Msa1130670 | -0.803725 | 3.039147e-49 | -8.615850e-47 |
| Msa1130670 | Msa1145250 | 0.806384 | 8.445628e-50 | -8.615850e-47 |
| Msa1130670 | Msa1188600 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa1130670 | Msa1190890 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa1130670 | Msa1242580 | 0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa1130670 | Msa1280620 | -0.804162 | 2.466157e-49 | -8.615850e-47 |
| Msa1130670 | Msa1294960 | -0.808601 | 2.859207e-50 | -8.615850e-47 |
| Msa1130670 | Msa1340040 | 0.816044 | 6.774465e-52 | -8.615850e-47 |
| Msa1130670 | Msa1371090 | -0.815316 | 9.841780e-52 | -8.615850e-47 |
| Msa1130670 | Msa1371240 | -0.800629 | 1.317499e-48 | -8.615850e-47 |
| Msa1130670 | Msa1395600 | 0.825536 | 4.442945e-54 | -8.615850e-47 |
| Msa0517090 | Msa1130670 | -0.800199 | 1.612129e-48 | -8.615850e-47 |
| Msa0519390 | Msa1130670 | -0.800215 | 1.600122e-48 | -8.615850e-47 |
| Msa0586850 | Msa1130670 | -0.809802 | 1.580495e-50 | -8.615850e-47 |
| Msa0855160 | Msa1130670 | 0.820031 | 8.501309e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130670 | MtrunA17_Chr7g0276671 | 95.556 | 270 | 7 | 1 | 1 | 270 | 1 | 265 | 0.0 | 511 |
| Msa1130670 | MtrunA17_Chr4g0045341 | 56.923 | 130 | 56 | 0 | 120 | 249 | 100 | 229 | 6.17e-44 | 154 |
| Msa1130670 | MtrunA17_Chr2g0286061 | 32.353 | 204 | 131 | 2 | 45 | 248 | 36 | 232 | 3.82e-29 | 114 |
| Msa1130670 | MtrunA17_Chr8g0371401 | 30.542 | 203 | 126 | 5 | 39 | 234 | 256 | 450 | 1.28e-13 | 70.5 |
| Msa1130670 | MtrunA17_Chr8g0369591 | 68.293 | 41 | 13 | 0 | 210 | 250 | 13 | 53 | 4.96e-12 | 60.8 |
| Msa1130670 | MtrunA17_Chr1g0157741 | 32.500 | 120 | 66 | 3 | 111 | 215 | 2 | 121 | 1.30e-11 | 64.3 |
| Msa1130670 | MtrunA17_Chr5g0440821 | 32.867 | 143 | 79 | 3 | 57 | 199 | 267 | 392 | 2.24e-11 | 63.9 |
| Msa1130670 | MtrunA17_Chr3g0143261 | 38.961 | 77 | 45 | 2 | 123 | 199 | 370 | 444 | 2.79e-11 | 63.5 |
| Msa1130670 | MtrunA17_Chr3g0143171 | 38.961 | 77 | 45 | 2 | 123 | 199 | 262 | 336 | 3.63e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130670 | AT2G43970.2 | 66.061 | 165 | 48 | 2 | 121 | 277 | 195 | 359 | 1.51e-66 | 216 |
| Msa1130670 | AT2G43970.1 | 70.199 | 151 | 44 | 1 | 121 | 270 | 195 | 345 | 3.57e-66 | 216 |
| Msa1130670 | AT3G19090.1 | 57.812 | 128 | 54 | 0 | 122 | 249 | 147 | 274 | 6.49e-43 | 152 |
| Msa1130670 | AT3G19090.2 | 47.742 | 155 | 54 | 1 | 122 | 249 | 147 | 301 | 4.55e-37 | 137 |
| Msa1130670 | AT5G46250.2 | 40.278 | 144 | 80 | 3 | 117 | 260 | 101 | 238 | 4.88e-29 | 113 |
| Msa1130670 | AT5G46250.3 | 40.278 | 144 | 80 | 3 | 117 | 260 | 101 | 238 | 5.08e-29 | 113 |
| Msa1130670 | AT5G46250.1 | 40.278 | 144 | 80 | 3 | 117 | 260 | 101 | 238 | 1.57e-28 | 113 |
| Msa1130670 | AT4G32720.1 | 30.935 | 139 | 82 | 2 | 117 | 241 | 8 | 146 | 2.39e-15 | 75.9 |
| Msa1130670 | AT4G32720.2 | 30.935 | 139 | 82 | 2 | 117 | 241 | 8 | 146 | 2.75e-15 | 75.5 |
| Msa1130670 | AT1G79880.1 | 29.730 | 148 | 89 | 3 | 116 | 249 | 6 | 152 | 9.32e-11 | 62.0 |
Find 81 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGACGAAGTTCCATTAT+TGG | 0.238157 | 7_3:-82867485 | None:intergenic |
| ATTATCTTACCAAAACCTTC+TGG | 0.246675 | 7_3:-82866191 | None:intergenic |
| GAGAAGAACTATCGCTAAAT+TGG | 0.247416 | 7_3:-82865464 | None:intergenic |
| CCTCAAAACATTTGCAAGTT+GGG | 0.319825 | 7_3:-82866511 | None:intergenic |
| AACAAAGACCCAGAAGGTTT+TGG | 0.327844 | 7_3:+82866182 | Msa1130670:CDS |
| TACTGTTGCTGTTTCTGTTT+AGG | 0.332079 | 7_3:-82865542 | None:intergenic |
| AAAGATGCAACAACGGATAT+TGG | 0.346669 | 7_3:-82866456 | None:intergenic |
| CGTGGGGTGGGCACAAACTC+TGG | 0.361092 | 7_3:-82865712 | None:intergenic |
| GAGGAGGCGGCGGTACTAAT+AGG | 0.375234 | 7_3:-82865735 | None:intergenic |
| CTAAATTGGATTTCATTGAT+TGG | 0.376165 | 7_3:-82865450 | None:intergenic |
| CTCCAGGTAGTTAGTGAAGA+TGG | 0.389456 | 7_3:+82866671 | Msa1130670:intron |
| CTTCAATGTCAGACTCGGTT+GGG | 0.389655 | 7_3:-82866718 | None:intergenic |
| TGAGGTTTGGCTTTGGAAGA+AGG | 0.392624 | 7_3:-82865904 | None:intergenic |
| GTTGGGAGTGGCTGGTTATG+AGG | 0.409727 | 7_3:-82866494 | None:intergenic |
| AGCTGAAGAAGACGAGAAAA+TGG | 0.410191 | 7_3:+82865567 | Msa1130670:exon |
| TTATCTTACCAAAACCTTCT+GGG | 0.411643 | 7_3:-82866190 | None:intergenic |
| CCGCCTCAAACATCCAATAA+TGG | 0.411994 | 7_3:+82867472 | Msa1130670:CDS |
| TGATGATGTAGCGGAGGAGG+AGG | 0.414278 | 7_3:-82865754 | None:intergenic |
| AGATGATGATGTAGCGGAGG+AGG | 0.418535 | 7_3:-82865757 | None:intergenic |
| CTGTTCTGCTTCAGTTCAAT+CGG | 0.431508 | 7_3:-82865486 | None:intergenic |
| ATCGGAATGAGGTTTGGCTT+TGG | 0.436218 | 7_3:-82865911 | None:intergenic |
| TTGTTCATCGGAATGAGGTT+TGG | 0.443583 | 7_3:-82865917 | None:intergenic |
| ATTTGCAAGTTGGGAGTGGC+TGG | 0.450222 | 7_3:-82866502 | None:intergenic |
| ATGTTTACCTTGTTATGTAA+AGG | 0.457953 | 7_3:-82867535 | None:intergenic |
| TTGGAAGAAGGAGTGTGCTC+TGG | 0.458505 | 7_3:-82865892 | None:intergenic |
| TGATGATGTGGTGGTGGTGG+TGG | 0.467390 | 7_3:-82865790 | None:intergenic |
| CGGTGGTTGGTTGCTTGAGT+CGG | 0.467606 | 7_3:-82865510 | None:intergenic |
| TCCTCAAAACATTTGCAAGT+TGG | 0.475112 | 7_3:-82866512 | None:intergenic |
| TCCTCATCCTCATCATCATC+AGG | 0.476891 | 7_3:+82865819 | Msa1130670:CDS |
| TTCTGATGACAATGATCGTC+GGG | 0.478445 | 7_3:-82866985 | None:intergenic |
| ACTTCGTCTGCTTCTAGATC+GGG | 0.481072 | 7_3:+82867496 | Msa1130670:CDS |
| GTTCCATTATTGGATGTTTG+AGG | 0.487748 | 7_3:-82867475 | None:intergenic |
| TTGGGAGTGGCTGGTTATGA+GGG | 0.490443 | 7_3:-82866493 | None:intergenic |
| ATTGGATGTTTGAGGCGGAC+AGG | 0.492043 | 7_3:-82867467 | None:intergenic |
| TGATGATGATGTGGTGGTGG+TGG | 0.496418 | 7_3:-82865793 | None:intergenic |
| TCTAGATCGGGAAAAGTTGA+TGG | 0.498191 | 7_3:+82867508 | Msa1130670:CDS |
| TTATTTCAGTGATTTAAACT+TGG | 0.500064 | 7_3:+82866130 | Msa1130670:CDS |
| TCTTTATTGACCAGGATTGA+CGG | 0.505925 | 7_3:-82865423 | None:intergenic |
| TTGTCATCAGAATCTTATGA+AGG | 0.509136 | 7_3:+82866996 | Msa1130670:CDS |
| GATGACGACGACGATGATGA+TGG | 0.512490 | 7_3:-82865646 | None:intergenic |
| AGCGGAGGAGGAGGAGGCGG+CGG | 0.520346 | 7_3:-82865745 | None:intergenic |
| TGATGTAGCGGAGGAGGAGG+AGG | 0.521593 | 7_3:-82865751 | None:intergenic |
| TTCAATGTCAGACTCGGTTG+GGG | 0.523708 | 7_3:-82866717 | None:intergenic |
| AGAAGATGATGATGTAGCGG+AGG | 0.525562 | 7_3:-82865760 | None:intergenic |
| TGTAGCGGAGGAGGAGGAGG+CGG | 0.526591 | 7_3:-82865748 | None:intergenic |
| TCTTCAATGTCAGACTCGGT+TGG | 0.526685 | 7_3:-82866719 | None:intergenic |
| AACTTCGTCTGCTTCTAGAT+CGG | 0.531843 | 7_3:+82867495 | Msa1130670:CDS |
| AAACATTTGCAAGTTGGGAG+TGG | 0.531969 | 7_3:-82866506 | None:intergenic |
| TCCAGGTAGTTAGTGAAGAT+GGG | 0.547894 | 7_3:+82866672 | Msa1130670:intron |
| ATGTTTGAGGCGGACAGGTA+CGG | 0.550213 | 7_3:-82867462 | None:intergenic |
| CGACTCAAGCAACCAACCAC+CGG | 0.551348 | 7_3:+82865511 | Msa1130670:five_prime_UTR |
| TGAGGTTGTTCATCGGAATG+AGG | 0.552368 | 7_3:-82865922 | None:intergenic |
| TCTGGCTGCTCAACTTCTTG+AGG | 0.552500 | 7_3:-82865874 | None:intergenic |
| TTGGTGACTCTTTATTGACC+AGG | 0.553596 | 7_3:-82865431 | None:intergenic |
| TGACGGCGAGATCACTACTT+GGG | 0.554675 | 7_3:-82865620 | None:intergenic |
| TAAAGAAGATGATGATGTAG+CGG | 0.555073 | 7_3:-82865763 | None:intergenic |
| TGATGATGATGATGTGGTGG+TGG | 0.559127 | 7_3:-82865796 | None:intergenic |
| GGTACTAATAGGCGTGGGGT+GGG | 0.561854 | 7_3:-82865724 | None:intergenic |
| ACGGCGAGATCACTACTTGG+GGG | 0.576200 | 7_3:-82865618 | None:intergenic |
| GACGATGATGATGGATCTGA+CGG | 0.582742 | 7_3:-82865637 | None:intergenic |
| TGGCATACCTTTACATAACA+AGG | 0.584359 | 7_3:+82867528 | Msa1130670:CDS |
| ACCTGATGATGATGAGGATG+AGG | 0.586336 | 7_3:-82865820 | None:intergenic |
| GATGAACCTCATCAAATGAT+CGG | 0.586359 | 7_3:-82866159 | None:intergenic |
| TAGCTCTTCAATGTCAGACT+CGG | 0.591776 | 7_3:-82866723 | None:intergenic |
| CGGCGAGATCACTACTTGGG+GGG | 0.596883 | 7_3:-82865617 | None:intergenic |
| TTTGTGATGAGGTTGTTCAT+CGG | 0.597803 | 7_3:-82865929 | None:intergenic |
| GATGACAATGATCGTCGGGT+AGG | 0.599393 | 7_3:-82866981 | None:intergenic |
| ATTCTGATGACAATGATCGT+CGG | 0.601582 | 7_3:-82866986 | None:intergenic |
| GGCTGCTCAACTTCTTGAGG+AGG | 0.601820 | 7_3:-82865871 | None:intergenic |
| TTCATGGCTTCATGCATGCA+CGG | 0.603170 | 7_3:-82867558 | None:intergenic |
| CTTATTAAAAGATGCAACAA+CGG | 0.608749 | 7_3:-82866463 | None:intergenic |
| CTACTACCGATCATTTGATG+AGG | 0.614726 | 7_3:+82866153 | Msa1130670:CDS |
| GACGGCGAGATCACTACTTG+GGG | 0.623843 | 7_3:-82865619 | None:intergenic |
| AATGGCGGAAGAAGAAGAGT+CGG | 0.627352 | 7_3:+82865585 | Msa1130670:exon |
| GAGGATATTGATGATGAGAG+CGG | 0.628630 | 7_3:-82865852 | None:intergenic |
| CCATTATTGGATGTTTGAGG+CGG | 0.636750 | 7_3:-82867472 | None:intergenic |
| TTCATCAACAAAGACCCAGA+AGG | 0.651463 | 7_3:+82866176 | Msa1130670:CDS |
| TGAACCACCTGATGATGATG+AGG | 0.668556 | 7_3:-82865826 | None:intergenic |
| TCATCCTCATCATCATCAGG+TGG | 0.673784 | 7_3:+82865822 | Msa1130670:CDS |
| CGGCGGTACTAATAGGCGTG+GGG | 0.695519 | 7_3:-82865728 | None:intergenic |
| TGAAGAAGACGAGAAAATGG+CGG | 0.706893 | 7_3:+82865570 | Msa1130670:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATAAAAAAAAA+AGG | - | chr7_3:82866582-82866601 | None:intergenic | 0.0% |
| !! | AAAAAAAATATAAAAAAAAA+AGG | - | chr7_3:82866582-82866601 | None:intergenic | 0.0% |
| !! | TTATTTCAGTGATTTAAACT+TGG | + | chr7_3:82866130-82866149 | Msa1130670:CDS | 20.0% |
| !!! | TGCATCTTTTAATAAGATTA+AGG | + | chr7_3:82866470-82866489 | Msa1130670:CDS | 20.0% |
| !! | TTATTTCAGTGATTTAAACT+TGG | + | chr7_3:82866130-82866149 | Msa1130670:CDS | 20.0% |
| !!! | TGCATCTTTTAATAAGATTA+AGG | + | chr7_3:82866470-82866489 | Msa1130670:CDS | 20.0% |
| ! | CTAAATTGGATTTCATTGAT+TGG | - | chr7_3:82865453-82865472 | None:intergenic | 25.0% |
| !! | TGTTTCAAAATTTTGTGATG+AGG | - | chr7_3:82865943-82865962 | None:intergenic | 25.0% |
| !!! | TCATCACAAAATTTTGAAAC+AGG | + | chr7_3:82865942-82865961 | Msa1130670:CDS | 25.0% |
| !!! | AACACTGAATTTTGTTGTAT+AGG | + | chr7_3:82866381-82866400 | Msa1130670:intron | 25.0% |
| ! | CTTATTAAAAGATGCAACAA+CGG | - | chr7_3:82866466-82866485 | None:intergenic | 25.0% |
| !!! | CTTTTTGAAACATTCTATTC+AGG | + | chr7_3:82866883-82866902 | Msa1130670:intron | 25.0% |
| !! | ATTCAGGATGTATTCTATTT+TGG | + | chr7_3:82866899-82866918 | Msa1130670:intron | 25.0% |
| !!! | TCATATCTTGCAATCTTTTT+TGG | + | chr7_3:82866932-82866951 | Msa1130670:intron | 25.0% |
| !! | TTTGAAGTGTAATTCATGTT+TGG | + | chr7_3:82867182-82867201 | Msa1130670:intron | 25.0% |
| !! | CTTATAATTCAAAGTTTTGC+AGG | - | chr7_3:82867401-82867420 | None:intergenic | 25.0% |
| !! | ATGTTTACCTTGTTATGTAA+AGG | - | chr7_3:82867538-82867557 | None:intergenic | 25.0% |
| ! | CTAAATTGGATTTCATTGAT+TGG | - | chr7_3:82865453-82865472 | None:intergenic | 25.0% |
| !! | TGTTTCAAAATTTTGTGATG+AGG | - | chr7_3:82865943-82865962 | None:intergenic | 25.0% |
| !!! | TCATCACAAAATTTTGAAAC+AGG | + | chr7_3:82865942-82865961 | Msa1130670:CDS | 25.0% |
| !!! | AACACTGAATTTTGTTGTAT+AGG | + | chr7_3:82866381-82866400 | Msa1130670:intron | 25.0% |
| ! | CTTATTAAAAGATGCAACAA+CGG | - | chr7_3:82866466-82866485 | None:intergenic | 25.0% |
| !!! | CTTTTTGAAACATTCTATTC+AGG | + | chr7_3:82866883-82866902 | Msa1130670:intron | 25.0% |
| !! | ATTCAGGATGTATTCTATTT+TGG | + | chr7_3:82866899-82866918 | Msa1130670:intron | 25.0% |
| !!! | TCATATCTTGCAATCTTTTT+TGG | + | chr7_3:82866932-82866951 | Msa1130670:intron | 25.0% |
| !! | TTTGAAGTGTAATTCATGTT+TGG | + | chr7_3:82867182-82867201 | Msa1130670:intron | 25.0% |
| !! | CTTATAATTCAAAGTTTTGC+AGG | - | chr7_3:82867401-82867420 | None:intergenic | 25.0% |
| !! | ATGTTTACCTTGTTATGTAA+AGG | - | chr7_3:82867538-82867557 | None:intergenic | 25.0% |
| !!! | TTCTGTTTAGGTTACTTTTC+CGG | - | chr7_3:82865533-82865552 | None:intergenic | 30.0% |
| ! | TTAAGGAACGTTTCTTTTAG+CGG | + | chr7_3:82865673-82865692 | Msa1130670:CDS | 30.0% |
| ! | TAAAGAAGATGATGATGTAG+CGG | - | chr7_3:82865766-82865785 | None:intergenic | 30.0% |
| CATGGAATGAAGATGAAATT+AGG | - | chr7_3:82865980-82865999 | None:intergenic | 30.0% | |
| TTATCTTACCAAAACCTTCT+GGG | - | chr7_3:82866193-82866212 | None:intergenic | 30.0% | |
| ATTATCTTACCAAAACCTTC+TGG | - | chr7_3:82866194-82866213 | None:intergenic | 30.0% | |
| TGAGTAGAATGAAATGTTTG+AGG | - | chr7_3:82866261-82866280 | None:intergenic | 30.0% | |
| !! | CTGAATTTTGTTGTATAGGA+TGG | + | chr7_3:82866385-82866404 | Msa1130670:intron | 30.0% |
| !! | ACAAACTTTTGACTGACTTT+AGG | + | chr7_3:82866763-82866782 | Msa1130670:intron | 30.0% |
| ATCAAAATACAACCCATCAA+AGG | - | chr7_3:82866843-82866862 | None:intergenic | 30.0% | |
| TTGTCATCAGAATCTTATGA+AGG | + | chr7_3:82866996-82867015 | Msa1130670:CDS | 30.0% | |
| AAAATTAAGTGCATTCACGT+TGG | - | chr7_3:82867139-82867158 | None:intergenic | 30.0% | |
| AAATTAGACTATTACCAGCT+TGG | - | chr7_3:82867261-82867280 | None:intergenic | 30.0% | |
| CTTCTTGTCTAACTATTGTT+TGG | + | chr7_3:82867287-82867306 | Msa1130670:intron | 30.0% | |
| !!! | TTCTGTTTAGGTTACTTTTC+CGG | - | chr7_3:82865533-82865552 | None:intergenic | 30.0% |
| ! | TTAAGGAACGTTTCTTTTAG+CGG | + | chr7_3:82865673-82865692 | Msa1130670:CDS | 30.0% |
| ! | TAAAGAAGATGATGATGTAG+CGG | - | chr7_3:82865766-82865785 | None:intergenic | 30.0% |
| CATGGAATGAAGATGAAATT+AGG | - | chr7_3:82865980-82865999 | None:intergenic | 30.0% | |
| TTATCTTACCAAAACCTTCT+GGG | - | chr7_3:82866193-82866212 | None:intergenic | 30.0% | |
| ATTATCTTACCAAAACCTTC+TGG | - | chr7_3:82866194-82866213 | None:intergenic | 30.0% | |
| TGAGTAGAATGAAATGTTTG+AGG | - | chr7_3:82866261-82866280 | None:intergenic | 30.0% | |
| !! | CTGAATTTTGTTGTATAGGA+TGG | + | chr7_3:82866385-82866404 | Msa1130670:intron | 30.0% |
| !! | ACAAACTTTTGACTGACTTT+AGG | + | chr7_3:82866763-82866782 | Msa1130670:intron | 30.0% |
| ATCAAAATACAACCCATCAA+AGG | - | chr7_3:82866843-82866862 | None:intergenic | 30.0% | |
| TTGTCATCAGAATCTTATGA+AGG | + | chr7_3:82866996-82867015 | Msa1130670:CDS | 30.0% | |
| AAAATTAAGTGCATTCACGT+TGG | - | chr7_3:82867139-82867158 | None:intergenic | 30.0% | |
| AAATTAGACTATTACCAGCT+TGG | - | chr7_3:82867261-82867280 | None:intergenic | 30.0% | |
| CTTCTTGTCTAACTATTGTT+TGG | + | chr7_3:82867287-82867306 | Msa1130670:intron | 30.0% | |
| TCTTTATTGACCAGGATTGA+CGG | - | chr7_3:82865426-82865445 | None:intergenic | 35.0% | |
| GAGAAGAACTATCGCTAAAT+TGG | - | chr7_3:82865467-82865486 | None:intergenic | 35.0% | |
| !! | TACTGTTGCTGTTTCTGTTT+AGG | - | chr7_3:82865545-82865564 | None:intergenic | 35.0% |
| TTTGTGATGAGGTTGTTCAT+CGG | - | chr7_3:82865932-82865951 | None:intergenic | 35.0% | |
| GAAGATGAAATTAGGCAAGT+TGG | - | chr7_3:82865972-82865991 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTTGGGATTTTTT+AGG | + | chr7_3:82866100-82866119 | Msa1130670:intron | 35.0% |
| !!! | TTTGGTTGGGATTTTTTAGG+TGG | + | chr7_3:82866103-82866122 | Msa1130670:intron | 35.0% |
| GATGAACCTCATCAAATGAT+CGG | - | chr7_3:82866162-82866181 | None:intergenic | 35.0% | |
| ACATTTCATTCTACTCACTC+TGG | + | chr7_3:82866264-82866283 | Msa1130670:intron | 35.0% | |
| CTGATAATATTATCCTCCCT+CGG | - | chr7_3:82866322-82866341 | None:intergenic | 35.0% | |
| TTGTTGTATAGGATGGTCTA+TGG | + | chr7_3:82866392-82866411 | Msa1130670:intron | 35.0% | |
| AAAGATGCAACAACGGATAT+TGG | - | chr7_3:82866459-82866478 | None:intergenic | 35.0% | |
| CCTCAAAACATTTGCAAGTT+GGG | - | chr7_3:82866514-82866533 | None:intergenic | 35.0% | |
| TCCTCAAAACATTTGCAAGT+TGG | - | chr7_3:82866515-82866534 | None:intergenic | 35.0% | |
| TAGTTTATCGACGCTTCATT+TGG | + | chr7_3:82866796-82866815 | Msa1130670:intron | 35.0% | |
| ACATCAAGAAATGCCTTTGA+TGG | + | chr7_3:82866827-82866846 | Msa1130670:intron | 35.0% | |
| CATCAAGAAATGCCTTTGAT+GGG | + | chr7_3:82866828-82866847 | Msa1130670:intron | 35.0% | |
| ATTCTGATGACAATGATCGT+CGG | - | chr7_3:82866989-82867008 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTTTCTGCTGT+TGG | + | chr7_3:82867012-82867031 | Msa1130670:CDS | 35.0% |
| !!! | TGAAGGTTTTTTCTGCTGTT+GGG | + | chr7_3:82867013-82867032 | Msa1130670:CDS | 35.0% |
| ! | CTTAGTCATATTTTCCAAGC+TGG | + | chr7_3:82867244-82867263 | Msa1130670:intron | 35.0% |
| GTTCCATTATTGGATGTTTG+AGG | - | chr7_3:82867478-82867497 | None:intergenic | 35.0% | |
| TGGCATACCTTTACATAACA+AGG | + | chr7_3:82867528-82867547 | Msa1130670:CDS | 35.0% | |
| TCTTTATTGACCAGGATTGA+CGG | - | chr7_3:82865426-82865445 | None:intergenic | 35.0% | |
| GAGAAGAACTATCGCTAAAT+TGG | - | chr7_3:82865467-82865486 | None:intergenic | 35.0% | |
| !! | TACTGTTGCTGTTTCTGTTT+AGG | - | chr7_3:82865545-82865564 | None:intergenic | 35.0% |
| TTTGTGATGAGGTTGTTCAT+CGG | - | chr7_3:82865932-82865951 | None:intergenic | 35.0% | |
| GAAGATGAAATTAGGCAAGT+TGG | - | chr7_3:82865972-82865991 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTTGGGATTTTTT+AGG | + | chr7_3:82866100-82866119 | Msa1130670:intron | 35.0% |
| !!! | TTTGGTTGGGATTTTTTAGG+TGG | + | chr7_3:82866103-82866122 | Msa1130670:intron | 35.0% |
| GATGAACCTCATCAAATGAT+CGG | - | chr7_3:82866162-82866181 | None:intergenic | 35.0% | |
| ACATTTCATTCTACTCACTC+TGG | + | chr7_3:82866264-82866283 | Msa1130670:intron | 35.0% | |
| CTGATAATATTATCCTCCCT+CGG | - | chr7_3:82866322-82866341 | None:intergenic | 35.0% | |
| TTGTTGTATAGGATGGTCTA+TGG | + | chr7_3:82866392-82866411 | Msa1130670:intron | 35.0% | |
| AAAGATGCAACAACGGATAT+TGG | - | chr7_3:82866459-82866478 | None:intergenic | 35.0% | |
| CCTCAAAACATTTGCAAGTT+GGG | - | chr7_3:82866514-82866533 | None:intergenic | 35.0% | |
| TCCTCAAAACATTTGCAAGT+TGG | - | chr7_3:82866515-82866534 | None:intergenic | 35.0% | |
| TAGTTTATCGACGCTTCATT+TGG | + | chr7_3:82866796-82866815 | Msa1130670:intron | 35.0% | |
| ACATCAAGAAATGCCTTTGA+TGG | + | chr7_3:82866827-82866846 | Msa1130670:intron | 35.0% | |
| CATCAAGAAATGCCTTTGAT+GGG | + | chr7_3:82866828-82866847 | Msa1130670:intron | 35.0% | |
| ATTCTGATGACAATGATCGT+CGG | - | chr7_3:82866989-82867008 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTTTCTGCTGT+TGG | + | chr7_3:82867012-82867031 | Msa1130670:CDS | 35.0% |
| !!! | TGAAGGTTTTTTCTGCTGTT+GGG | + | chr7_3:82867013-82867032 | Msa1130670:CDS | 35.0% |
| ! | CTTAGTCATATTTTCCAAGC+TGG | + | chr7_3:82867244-82867263 | Msa1130670:intron | 35.0% |
| GTTCCATTATTGGATGTTTG+AGG | - | chr7_3:82867478-82867497 | None:intergenic | 35.0% | |
| TGGCATACCTTTACATAACA+AGG | + | chr7_3:82867528-82867547 | Msa1130670:CDS | 35.0% | |
| ! | TTGGTGACTCTTTATTGACC+AGG | - | chr7_3:82865434-82865453 | None:intergenic | 40.0% |
| CTGTTCTGCTTCAGTTCAAT+CGG | - | chr7_3:82865489-82865508 | None:intergenic | 40.0% | |
| !!! | TGTTTAGGTTACTTTTCCGG+TGG | - | chr7_3:82865530-82865549 | None:intergenic | 40.0% |
| AGCTGAAGAAGACGAGAAAA+TGG | + | chr7_3:82865567-82865586 | Msa1130670:exon | 40.0% | |
| TGAAGAAGACGAGAAAATGG+CGG | + | chr7_3:82865570-82865589 | Msa1130670:exon | 40.0% | |
| ! | TGAGGATGATGATGATGATG+TGG | - | chr7_3:82865805-82865824 | None:intergenic | 40.0% |
| !! | GAGGATATTGATGATGAGAG+CGG | - | chr7_3:82865855-82865874 | None:intergenic | 40.0% |
| TTGTTCATCGGAATGAGGTT+TGG | - | chr7_3:82865920-82865939 | None:intergenic | 40.0% | |
| TTCCATGTTCCAACTAGACT+AGG | + | chr7_3:82865993-82866012 | Msa1130670:intron | 40.0% | |
| TCCATGTTCCAACTAGACTA+GGG | + | chr7_3:82865994-82866013 | Msa1130670:intron | 40.0% | |
| TGCATCTCTACAACTTGACT+TGG | + | chr7_3:82866078-82866097 | Msa1130670:intron | 40.0% | |
| GCATCTCTACAACTTGACTT+GGG | + | chr7_3:82866079-82866098 | Msa1130670:intron | 40.0% | |
| !!! | CTACAACTTGACTTGGGTTT+TGG | + | chr7_3:82866085-82866104 | Msa1130670:intron | 40.0% |
| !!! | AACTTGACTTGGGTTTTGGT+TGG | + | chr7_3:82866089-82866108 | Msa1130670:intron | 40.0% |
| !!! | ACTTGACTTGGGTTTTGGTT+GGG | + | chr7_3:82866090-82866109 | Msa1130670:intron | 40.0% |
| CTACTACCGATCATTTGATG+AGG | + | chr7_3:82866153-82866172 | Msa1130670:CDS | 40.0% | |
| TTCATCAACAAAGACCCAGA+AGG | + | chr7_3:82866176-82866195 | Msa1130670:CDS | 40.0% | |
| ! | AACAAAGACCCAGAAGGTTT+TGG | + | chr7_3:82866182-82866201 | Msa1130670:CDS | 40.0% |
| ATTCAGCTACTCAGGGAAAA+AGG | - | chr7_3:82866230-82866249 | None:intergenic | 40.0% | |
| CGTAGTAATTCAGCTACTCA+GGG | - | chr7_3:82866237-82866256 | None:intergenic | 40.0% | |
| CCTGAGTAGCTGAATTACTA+CGG | + | chr7_3:82866235-82866254 | Msa1130670:intron | 40.0% | |
| ! | AAACATTTGCAAGTTGGGAG+TGG | - | chr7_3:82866509-82866528 | None:intergenic | 40.0% |
| ! | CCCAACTTGCAAATGTTTTG+AGG | + | chr7_3:82866511-82866530 | Msa1130670:CDS | 40.0% |
| ACATCATCGATGAATTCTCC+AGG | + | chr7_3:82866655-82866674 | Msa1130670:intron | 40.0% | |
| TCCAGGTAGTTAGTGAAGAT+GGG | + | chr7_3:82866672-82866691 | Msa1130670:intron | 40.0% | |
| TAGCTCTTCAATGTCAGACT+CGG | - | chr7_3:82866726-82866745 | None:intergenic | 40.0% | |
| TTCTGATGACAATGATCGTC+GGG | - | chr7_3:82866988-82867007 | None:intergenic | 40.0% | |
| CCATTATTGGATGTTTGAGG+CGG | - | chr7_3:82867475-82867494 | None:intergenic | 40.0% | |
| AGCAGACGAAGTTCCATTAT+TGG | - | chr7_3:82867488-82867507 | None:intergenic | 40.0% | |
| AACTTCGTCTGCTTCTAGAT+CGG | + | chr7_3:82867495-82867514 | Msa1130670:CDS | 40.0% | |
| TCTAGATCGGGAAAAGTTGA+TGG | + | chr7_3:82867508-82867527 | Msa1130670:CDS | 40.0% | |
| ! | TTGGTGACTCTTTATTGACC+AGG | - | chr7_3:82865434-82865453 | None:intergenic | 40.0% |
| CTGTTCTGCTTCAGTTCAAT+CGG | - | chr7_3:82865489-82865508 | None:intergenic | 40.0% | |
| !!! | TGTTTAGGTTACTTTTCCGG+TGG | - | chr7_3:82865530-82865549 | None:intergenic | 40.0% |
| AGCTGAAGAAGACGAGAAAA+TGG | + | chr7_3:82865567-82865586 | Msa1130670:exon | 40.0% | |
| TGAAGAAGACGAGAAAATGG+CGG | + | chr7_3:82865570-82865589 | Msa1130670:exon | 40.0% | |
| ! | TGAGGATGATGATGATGATG+TGG | - | chr7_3:82865805-82865824 | None:intergenic | 40.0% |
| !! | GAGGATATTGATGATGAGAG+CGG | - | chr7_3:82865855-82865874 | None:intergenic | 40.0% |
| TTGTTCATCGGAATGAGGTT+TGG | - | chr7_3:82865920-82865939 | None:intergenic | 40.0% | |
| TTCCATGTTCCAACTAGACT+AGG | + | chr7_3:82865993-82866012 | Msa1130670:intron | 40.0% | |
| TCCATGTTCCAACTAGACTA+GGG | + | chr7_3:82865994-82866013 | Msa1130670:intron | 40.0% | |
| TGCATCTCTACAACTTGACT+TGG | + | chr7_3:82866078-82866097 | Msa1130670:intron | 40.0% | |
| GCATCTCTACAACTTGACTT+GGG | + | chr7_3:82866079-82866098 | Msa1130670:intron | 40.0% | |
| !!! | CTACAACTTGACTTGGGTTT+TGG | + | chr7_3:82866085-82866104 | Msa1130670:intron | 40.0% |
| !!! | AACTTGACTTGGGTTTTGGT+TGG | + | chr7_3:82866089-82866108 | Msa1130670:intron | 40.0% |
| !!! | ACTTGACTTGGGTTTTGGTT+GGG | + | chr7_3:82866090-82866109 | Msa1130670:intron | 40.0% |
| CTACTACCGATCATTTGATG+AGG | + | chr7_3:82866153-82866172 | Msa1130670:CDS | 40.0% | |
| TTCATCAACAAAGACCCAGA+AGG | + | chr7_3:82866176-82866195 | Msa1130670:CDS | 40.0% | |
| ! | AACAAAGACCCAGAAGGTTT+TGG | + | chr7_3:82866182-82866201 | Msa1130670:CDS | 40.0% |
| ATTCAGCTACTCAGGGAAAA+AGG | - | chr7_3:82866230-82866249 | None:intergenic | 40.0% | |
| CGTAGTAATTCAGCTACTCA+GGG | - | chr7_3:82866237-82866256 | None:intergenic | 40.0% | |
| CCTGAGTAGCTGAATTACTA+CGG | + | chr7_3:82866235-82866254 | Msa1130670:intron | 40.0% | |
| ! | AAACATTTGCAAGTTGGGAG+TGG | - | chr7_3:82866509-82866528 | None:intergenic | 40.0% |
| ! | CCCAACTTGCAAATGTTTTG+AGG | + | chr7_3:82866511-82866530 | Msa1130670:CDS | 40.0% |
| ACATCATCGATGAATTCTCC+AGG | + | chr7_3:82866655-82866674 | Msa1130670:intron | 40.0% | |
| TCCAGGTAGTTAGTGAAGAT+GGG | + | chr7_3:82866672-82866691 | Msa1130670:intron | 40.0% | |
| TAGCTCTTCAATGTCAGACT+CGG | - | chr7_3:82866726-82866745 | None:intergenic | 40.0% | |
| TTCTGATGACAATGATCGTC+GGG | - | chr7_3:82866988-82867007 | None:intergenic | 40.0% | |
| CCATTATTGGATGTTTGAGG+CGG | - | chr7_3:82867475-82867494 | None:intergenic | 40.0% | |
| AGCAGACGAAGTTCCATTAT+TGG | - | chr7_3:82867488-82867507 | None:intergenic | 40.0% | |
| AACTTCGTCTGCTTCTAGAT+CGG | + | chr7_3:82867495-82867514 | Msa1130670:CDS | 40.0% | |
| TCTAGATCGGGAAAAGTTGA+TGG | + | chr7_3:82867508-82867527 | Msa1130670:CDS | 40.0% | |
| !!! | TAGGTTACTTTTCCGGTGGT+TGG | - | chr7_3:82865526-82865545 | None:intergenic | 45.0% |
| ! | AATGGCGGAAGAAGAAGAGT+CGG | + | chr7_3:82865585-82865604 | Msa1130670:exon | 45.0% |
| !! | GACGATGATGATGGATCTGA+CGG | - | chr7_3:82865640-82865659 | None:intergenic | 45.0% |
| ! | CGTCGTCGTCATCTCTTTTA+AGG | + | chr7_3:82865656-82865675 | Msa1130670:CDS | 45.0% |
| ! | AGAAGATGATGATGTAGCGG+AGG | - | chr7_3:82865763-82865782 | None:intergenic | 45.0% |
| ! | TGATGATGATGATGTGGTGG+TGG | - | chr7_3:82865799-82865818 | None:intergenic | 45.0% |
| ! | GGATGATGATGATGATGTGG+TGG | - | chr7_3:82865802-82865821 | None:intergenic | 45.0% |
| TCCTCATCCTCATCATCATC+AGG | + | chr7_3:82865819-82865838 | Msa1130670:CDS | 45.0% | |
| ! | ACCTGATGATGATGAGGATG+AGG | - | chr7_3:82865823-82865842 | None:intergenic | 45.0% |
| TCATCCTCATCATCATCAGG+TGG | + | chr7_3:82865822-82865841 | Msa1130670:CDS | 45.0% | |
| ! | TGAACCACCTGATGATGATG+AGG | - | chr7_3:82865829-82865848 | None:intergenic | 45.0% |
| !! | TGAGGTTTGGCTTTGGAAGA+AGG | - | chr7_3:82865907-82865926 | None:intergenic | 45.0% |
| ! | ATCGGAATGAGGTTTGGCTT+TGG | - | chr7_3:82865914-82865933 | None:intergenic | 45.0% |
| TGAGGTTGTTCATCGGAATG+AGG | - | chr7_3:82865925-82865944 | None:intergenic | 45.0% | |
| ACCCTAGTCTAGTTGGAACA+TGG | - | chr7_3:82865998-82866017 | None:intergenic | 45.0% | |
| ATGTTCCAACTAGACTAGGG+TGG | + | chr7_3:82865997-82866016 | Msa1130670:intron | 45.0% | |
| ATGAACCACCCTAGTCTAGT+TGG | - | chr7_3:82866005-82866024 | None:intergenic | 45.0% | |
| CCGTAGTAATTCAGCTACTC+AGG | - | chr7_3:82866238-82866257 | None:intergenic | 45.0% | |
| CTCCAGGTAGTTAGTGAAGA+TGG | + | chr7_3:82866671-82866690 | Msa1130670:intron | 45.0% | |
| TCCCATCTTCACTAACTACC+TGG | - | chr7_3:82866676-82866695 | None:intergenic | 45.0% | |
| ! | TTCAATGTCAGACTCGGTTG+GGG | - | chr7_3:82866720-82866739 | None:intergenic | 45.0% |
| ! | CTTCAATGTCAGACTCGGTT+GGG | - | chr7_3:82866721-82866740 | None:intergenic | 45.0% |
| ! | TCTTCAATGTCAGACTCGGT+TGG | - | chr7_3:82866722-82866741 | None:intergenic | 45.0% |
| ! | ATGATCGTCGGGTAGGTTTT+CGG | - | chr7_3:82866977-82866996 | None:intergenic | 45.0% |
| !!! | AGGTTTTTTCTGCTGTTGGG+AGG | + | chr7_3:82867016-82867035 | Msa1130670:CDS | 45.0% |
| CCGCCTCAAACATCCAATAA+TGG | + | chr7_3:82867472-82867491 | Msa1130670:CDS | 45.0% | |
| ACTTCGTCTGCTTCTAGATC+GGG | + | chr7_3:82867496-82867515 | Msa1130670:CDS | 45.0% | |
| !!! | TAGGTTACTTTTCCGGTGGT+TGG | - | chr7_3:82865526-82865545 | None:intergenic | 45.0% |
| ! | AATGGCGGAAGAAGAAGAGT+CGG | + | chr7_3:82865585-82865604 | Msa1130670:exon | 45.0% |
| !! | GACGATGATGATGGATCTGA+CGG | - | chr7_3:82865640-82865659 | None:intergenic | 45.0% |
| ! | CGTCGTCGTCATCTCTTTTA+AGG | + | chr7_3:82865656-82865675 | Msa1130670:CDS | 45.0% |
| ! | AGAAGATGATGATGTAGCGG+AGG | - | chr7_3:82865763-82865782 | None:intergenic | 45.0% |
| ! | TGATGATGATGATGTGGTGG+TGG | - | chr7_3:82865799-82865818 | None:intergenic | 45.0% |
| ! | GGATGATGATGATGATGTGG+TGG | - | chr7_3:82865802-82865821 | None:intergenic | 45.0% |
| TCCTCATCCTCATCATCATC+AGG | + | chr7_3:82865819-82865838 | Msa1130670:CDS | 45.0% | |
| ! | ACCTGATGATGATGAGGATG+AGG | - | chr7_3:82865823-82865842 | None:intergenic | 45.0% |
| TCATCCTCATCATCATCAGG+TGG | + | chr7_3:82865822-82865841 | Msa1130670:CDS | 45.0% | |
| ! | TGAACCACCTGATGATGATG+AGG | - | chr7_3:82865829-82865848 | None:intergenic | 45.0% |
| !! | TGAGGTTTGGCTTTGGAAGA+AGG | - | chr7_3:82865907-82865926 | None:intergenic | 45.0% |
| ! | ATCGGAATGAGGTTTGGCTT+TGG | - | chr7_3:82865914-82865933 | None:intergenic | 45.0% |
| TGAGGTTGTTCATCGGAATG+AGG | - | chr7_3:82865925-82865944 | None:intergenic | 45.0% | |
| ACCCTAGTCTAGTTGGAACA+TGG | - | chr7_3:82865998-82866017 | None:intergenic | 45.0% | |
| ATGTTCCAACTAGACTAGGG+TGG | + | chr7_3:82865997-82866016 | Msa1130670:intron | 45.0% | |
| ATGAACCACCCTAGTCTAGT+TGG | - | chr7_3:82866005-82866024 | None:intergenic | 45.0% | |
| CCGTAGTAATTCAGCTACTC+AGG | - | chr7_3:82866238-82866257 | None:intergenic | 45.0% | |
| CTCCAGGTAGTTAGTGAAGA+TGG | + | chr7_3:82866671-82866690 | Msa1130670:intron | 45.0% | |
| TCCCATCTTCACTAACTACC+TGG | - | chr7_3:82866676-82866695 | None:intergenic | 45.0% | |
| ! | TTCAATGTCAGACTCGGTTG+GGG | - | chr7_3:82866720-82866739 | None:intergenic | 45.0% |
| ! | CTTCAATGTCAGACTCGGTT+GGG | - | chr7_3:82866721-82866740 | None:intergenic | 45.0% |
| ! | TCTTCAATGTCAGACTCGGT+TGG | - | chr7_3:82866722-82866741 | None:intergenic | 45.0% |
| ! | ATGATCGTCGGGTAGGTTTT+CGG | - | chr7_3:82866977-82866996 | None:intergenic | 45.0% |
| !!! | AGGTTTTTTCTGCTGTTGGG+AGG | + | chr7_3:82867016-82867035 | Msa1130670:CDS | 45.0% |
| CCGCCTCAAACATCCAATAA+TGG | + | chr7_3:82867472-82867491 | Msa1130670:CDS | 45.0% | |
| ACTTCGTCTGCTTCTAGATC+GGG | + | chr7_3:82867496-82867515 | Msa1130670:CDS | 45.0% | |
| TGACGGCGAGATCACTACTT+GGG | - | chr7_3:82865623-82865642 | None:intergenic | 50.0% | |
| GATGACGACGACGATGATGA+TGG | - | chr7_3:82865649-82865668 | None:intergenic | 50.0% | |
| ! | TTTTAGCGGTCTCAACGCTC+AGG | + | chr7_3:82865687-82865706 | Msa1130670:CDS | 50.0% |
| ! | AGATGATGATGTAGCGGAGG+AGG | - | chr7_3:82865760-82865779 | None:intergenic | 50.0% |
| !! | TGATGATGATGTGGTGGTGG+TGG | - | chr7_3:82865796-82865815 | None:intergenic | 50.0% |
| TCTGGCTGCTCAACTTCTTG+AGG | - | chr7_3:82865877-82865896 | None:intergenic | 50.0% | |
| ! | TTGGAAGAAGGAGTGTGCTC+TGG | - | chr7_3:82865895-82865914 | None:intergenic | 50.0% |
| ! | AGGGGGTGCAGTAAGTGATA+AGG | - | chr7_3:82866293-82866312 | None:intergenic | 50.0% |
| TATCCTCCCTCGGAAAGAGA+GGG | - | chr7_3:82866312-82866331 | None:intergenic | 50.0% | |
| TTATCCTCCCTCGGAAAGAG+AGG | - | chr7_3:82866313-82866332 | None:intergenic | 50.0% | |
| ! | TTGGGAGTGGCTGGTTATGA+GGG | - | chr7_3:82866496-82866515 | None:intergenic | 50.0% |
| ! | ATTTGCAAGTTGGGAGTGGC+TGG | - | chr7_3:82866505-82866524 | None:intergenic | 50.0% |
| GATGACAATGATCGTCGGGT+AGG | - | chr7_3:82866984-82867003 | None:intergenic | 50.0% | |
| ! | ATGTTTGAGGCGGACAGGTA+CGG | - | chr7_3:82867465-82867484 | None:intergenic | 50.0% |
| ! | ATTGGATGTTTGAGGCGGAC+AGG | - | chr7_3:82867470-82867489 | None:intergenic | 50.0% |
| TGACGGCGAGATCACTACTT+GGG | - | chr7_3:82865623-82865642 | None:intergenic | 50.0% | |
| GATGACGACGACGATGATGA+TGG | - | chr7_3:82865649-82865668 | None:intergenic | 50.0% | |
| ! | TTTTAGCGGTCTCAACGCTC+AGG | + | chr7_3:82865687-82865706 | Msa1130670:CDS | 50.0% |
| ! | AGATGATGATGTAGCGGAGG+AGG | - | chr7_3:82865760-82865779 | None:intergenic | 50.0% |
| !! | TGATGATGATGTGGTGGTGG+TGG | - | chr7_3:82865796-82865815 | None:intergenic | 50.0% |
| TCTGGCTGCTCAACTTCTTG+AGG | - | chr7_3:82865877-82865896 | None:intergenic | 50.0% | |
| ! | TTGGAAGAAGGAGTGTGCTC+TGG | - | chr7_3:82865895-82865914 | None:intergenic | 50.0% |
| ! | AGGGGGTGCAGTAAGTGATA+AGG | - | chr7_3:82866293-82866312 | None:intergenic | 50.0% |
| TATCCTCCCTCGGAAAGAGA+GGG | - | chr7_3:82866312-82866331 | None:intergenic | 50.0% | |
| TTATCCTCCCTCGGAAAGAG+AGG | - | chr7_3:82866313-82866332 | None:intergenic | 50.0% | |
| ! | TTGGGAGTGGCTGGTTATGA+GGG | - | chr7_3:82866496-82866515 | None:intergenic | 50.0% |
| ! | ATTTGCAAGTTGGGAGTGGC+TGG | - | chr7_3:82866505-82866524 | None:intergenic | 50.0% |
| GATGACAATGATCGTCGGGT+AGG | - | chr7_3:82866984-82867003 | None:intergenic | 50.0% | |
| ! | ATGTTTGAGGCGGACAGGTA+CGG | - | chr7_3:82867465-82867484 | None:intergenic | 50.0% |
| ! | ATTGGATGTTTGAGGCGGAC+AGG | - | chr7_3:82867470-82867489 | None:intergenic | 50.0% |
| ! | CGGTGGTTGGTTGCTTGAGT+CGG | - | chr7_3:82865513-82865532 | None:intergenic | 55.0% |
| CGACTCAAGCAACCAACCAC+CGG | + | chr7_3:82865511-82865530 | Msa1130670:five_prime_UTR | 55.0% | |
| ACGGCGAGATCACTACTTGG+GGG | - | chr7_3:82865621-82865640 | None:intergenic | 55.0% | |
| GACGGCGAGATCACTACTTG+GGG | - | chr7_3:82865622-82865641 | None:intergenic | 55.0% | |
| CTGACGGCGAGATCACTACT+TGG | - | chr7_3:82865624-82865643 | None:intergenic | 55.0% | |
| GGTACTAATAGGCGTGGGGT+GGG | - | chr7_3:82865727-82865746 | None:intergenic | 55.0% | |
| ! | TGATGATGTAGCGGAGGAGG+AGG | - | chr7_3:82865757-82865776 | None:intergenic | 55.0% |
| !! | TGATGATGTGGTGGTGGTGG+TGG | - | chr7_3:82865793-82865812 | None:intergenic | 55.0% |
| GGCTGCTCAACTTCTTGAGG+AGG | - | chr7_3:82865874-82865893 | None:intergenic | 55.0% | |
| ATCCTCCCTCGGAAAGAGAG+GGG | - | chr7_3:82866311-82866330 | None:intergenic | 55.0% | |
| ! | GTTGGGAGTGGCTGGTTATG+AGG | - | chr7_3:82866497-82866516 | None:intergenic | 55.0% |
| CGTGCATGCATGAAGCCATG+AGG | + | chr7_3:82867559-82867578 | Msa1130670:CDS | 55.0% | |
| ! | CGGTGGTTGGTTGCTTGAGT+CGG | - | chr7_3:82865513-82865532 | None:intergenic | 55.0% |
| CGACTCAAGCAACCAACCAC+CGG | + | chr7_3:82865511-82865530 | Msa1130670:five_prime_UTR | 55.0% | |
| ACGGCGAGATCACTACTTGG+GGG | - | chr7_3:82865621-82865640 | None:intergenic | 55.0% | |
| GACGGCGAGATCACTACTTG+GGG | - | chr7_3:82865622-82865641 | None:intergenic | 55.0% | |
| CTGACGGCGAGATCACTACT+TGG | - | chr7_3:82865624-82865643 | None:intergenic | 55.0% | |
| GGTACTAATAGGCGTGGGGT+GGG | - | chr7_3:82865727-82865746 | None:intergenic | 55.0% | |
| ! | TGATGATGTAGCGGAGGAGG+AGG | - | chr7_3:82865757-82865776 | None:intergenic | 55.0% |
| !! | TGATGATGTGGTGGTGGTGG+TGG | - | chr7_3:82865793-82865812 | None:intergenic | 55.0% |
| GGCTGCTCAACTTCTTGAGG+AGG | - | chr7_3:82865874-82865893 | None:intergenic | 55.0% | |
| ATCCTCCCTCGGAAAGAGAG+GGG | - | chr7_3:82866311-82866330 | None:intergenic | 55.0% | |
| ! | GTTGGGAGTGGCTGGTTATG+AGG | - | chr7_3:82866497-82866516 | None:intergenic | 55.0% |
| CGGCGAGATCACTACTTGGG+GGG | - | chr7_3:82865620-82865639 | None:intergenic | 60.0% | |
| CGGTACTAATAGGCGTGGGG+TGG | - | chr7_3:82865728-82865747 | None:intergenic | 60.0% | |
| CGGCGGTACTAATAGGCGTG+GGG | - | chr7_3:82865731-82865750 | None:intergenic | 60.0% | |
| GCGGCGGTACTAATAGGCGT+GGG | - | chr7_3:82865732-82865751 | None:intergenic | 60.0% | |
| GAGGAGGCGGCGGTACTAAT+AGG | - | chr7_3:82865738-82865757 | None:intergenic | 60.0% | |
| ! | TGATGTAGCGGAGGAGGAGG+AGG | - | chr7_3:82865754-82865773 | None:intergenic | 60.0% |
| TGCACCCCCTCTCTTTCCGA+GGG | + | chr7_3:82866303-82866322 | Msa1130670:intron | 60.0% | |
| TCCTCCCTCGGAAAGAGAGG+GGG | - | chr7_3:82866310-82866329 | None:intergenic | 60.0% | |
| CGGCGAGATCACTACTTGGG+GGG | - | chr7_3:82865620-82865639 | None:intergenic | 60.0% | |
| CGGTACTAATAGGCGTGGGG+TGG | - | chr7_3:82865728-82865747 | None:intergenic | 60.0% | |
| CGGCGGTACTAATAGGCGTG+GGG | - | chr7_3:82865731-82865750 | None:intergenic | 60.0% | |
| GCGGCGGTACTAATAGGCGT+GGG | - | chr7_3:82865732-82865751 | None:intergenic | 60.0% | |
| GAGGAGGCGGCGGTACTAAT+AGG | - | chr7_3:82865738-82865757 | None:intergenic | 60.0% | |
| ! | TGATGTAGCGGAGGAGGAGG+AGG | - | chr7_3:82865754-82865773 | None:intergenic | 60.0% |
| TGCACCCCCTCTCTTTCCGA+GGG | + | chr7_3:82866303-82866322 | Msa1130670:intron | 60.0% | |
| TCCTCCCTCGGAAAGAGAGG+GGG | - | chr7_3:82866310-82866329 | None:intergenic | 60.0% | |
| CGTGGGGTGGGCACAAACTC+TGG | - | chr7_3:82865715-82865734 | None:intergenic | 65.0% | |
| GGCGGCGGTACTAATAGGCG+TGG | - | chr7_3:82865733-82865752 | None:intergenic | 65.0% | |
| ! | TGTAGCGGAGGAGGAGGAGG+CGG | - | chr7_3:82865751-82865770 | None:intergenic | 65.0% |
| CTGCACCCCCTCTCTTTCCG+AGG | + | chr7_3:82866302-82866321 | Msa1130670:intron | 65.0% | |
| ACCCCCTCTCTTTCCGAGGG+AGG | + | chr7_3:82866306-82866325 | Msa1130670:intron | 65.0% | |
| CGTGGGGTGGGCACAAACTC+TGG | - | chr7_3:82865715-82865734 | None:intergenic | 65.0% | |
| GGCGGCGGTACTAATAGGCG+TGG | - | chr7_3:82865733-82865752 | None:intergenic | 65.0% | |
| ! | TGTAGCGGAGGAGGAGGAGG+CGG | - | chr7_3:82865751-82865770 | None:intergenic | 65.0% |
| CTGCACCCCCTCTCTTTCCG+AGG | + | chr7_3:82866302-82866321 | Msa1130670:intron | 65.0% | |
| ACCCCCTCTCTTTCCGAGGG+AGG | + | chr7_3:82866306-82866325 | Msa1130670:intron | 65.0% | |
| ! | CCAGGATTGACGGACGCGCC+CGG | - | chr7_3:82865416-82865435 | None:intergenic | 70.0% |
| ! | CCAGGATTGACGGACGCGCC+CGG | - | chr7_3:82865416-82865435 | None:intergenic | 70.0% |
| CCGGGCGCGTCCGTCAATCC+TGG | + | chr7_3:82865413-82865432 | Msa1130670:five_prime_UTR | 75.0% | |
| AGCGGAGGAGGAGGAGGCGG+CGG | - | chr7_3:82865748-82865767 | None:intergenic | 75.0% | |
| CCGGGCGCGTCCGTCAATCC+TGG | + | chr7_3:82865413-82865432 | Msa1130670:five_prime_UTR | 75.0% | |
| AGCGGAGGAGGAGGAGGCGG+CGG | - | chr7_3:82865748-82865767 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82865411 | 82867579 | 82865411 | ID=Msa1130670;Name=Msa1130670 |
| chr7_3 | mRNA | 82865411 | 82867579 | 82865411 | ID=Msa1130670-mRNA-1;Parent=Msa1130670;Name=Msa1130670-mRNA-1;_AED=0.12;_eAED=0.12;_QI=175|1|0.83|1|1|1|6|0|278 |
| chr7_3 | exon | 82865411 | 82865963 | 82865411 | ID=Msa1130670-mRNA-1:exon:24512;Parent=Msa1130670-mRNA-1 |
| chr7_3 | exon | 82866122 | 82866203 | 82866122 | ID=Msa1130670-mRNA-1:exon:24513;Parent=Msa1130670-mRNA-1 |
| chr7_3 | exon | 82866454 | 82866548 | 82866454 | ID=Msa1130670-mRNA-1:exon:24514;Parent=Msa1130670-mRNA-1 |
| chr7_3 | exon | 82866677 | 82866748 | 82866677 | ID=Msa1130670-mRNA-1:exon:24515;Parent=Msa1130670-mRNA-1 |
| chr7_3 | exon | 82866958 | 82867037 | 82866958 | ID=Msa1130670-mRNA-1:exon:24516;Parent=Msa1130670-mRNA-1 |
| chr7_3 | exon | 82867450 | 82867579 | 82867450 | ID=Msa1130670-mRNA-1:exon:24517;Parent=Msa1130670-mRNA-1 |
| chr7_3 | five_prime_UTR | 82865411 | 82865585 | 82865411 | ID=Msa1130670-mRNA-1:five_prime_utr;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82865586 | 82865963 | 82865586 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82866122 | 82866203 | 82866122 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82866454 | 82866548 | 82866454 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82866677 | 82866748 | 82866677 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82866958 | 82867037 | 82866958 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| chr7_3 | CDS | 82867450 | 82867579 | 82867450 | ID=Msa1130670-mRNA-1:cds;Parent=Msa1130670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
