Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805080 | XP_039690581.1 | 34.783 | 253 | 149 | 6 | 42 | 288 | 3 | 245 | 6.43e-33 | 134 |
| Msa0805080 | XP_039690581.1 | 41.667 | 120 | 67 | 2 | 1 | 120 | 124 | 240 | 7.14e-15 | 85.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805080 | sp|P93218|GP3_SOLLC | 45.802 | 131 | 67 | 2 | 158 | 288 | 416 | 542 | 8.43e-28 | 115 |
| Msa0805080 | sp|P93218|GP3_SOLLC | 45.299 | 117 | 60 | 2 | 1 | 117 | 422 | 534 | 1.81e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805080 | G7JYZ7 | 32.219 | 329 | 169 | 7 | 8 | 288 | 1 | 323 | 3.85e-34 | 141 |
| Msa0805080 | G7JYZ7 | 33.036 | 336 | 171 | 7 | 1 | 288 | 202 | 531 | 4.30e-37 | 149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0805080 | 0.815421 | 9.325357e-52 | -8.615850e-47 |
| Msa0805080 | Msa0848030 | 0.816583 | 5.130839e-52 | -8.615850e-47 |
| Msa0805080 | Msa0936390 | 0.804215 | 2.403824e-49 | -8.615850e-47 |
| Msa0805080 | Msa1121490 | 0.802344 | 5.866412e-49 | -8.615850e-47 |
| Msa0805080 | Msa1353470 | 0.802991 | 4.312926e-49 | -8.615850e-47 |
| Msa0149300 | Msa0805080 | 0.816325 | 5.862431e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805080 | MtrunA17_Chr5g0412981 | 32.219 | 329 | 169 | 7 | 8 | 288 | 1 | 323 | 7.02e-39 | 140 |
| Msa0805080 | MtrunA17_Chr5g0412981 | 41.667 | 120 | 67 | 2 | 1 | 120 | 202 | 318 | 1.12e-18 | 85.5 |
| Msa0805080 | MtrunA17_Chr5g0412991 | 32.219 | 329 | 169 | 7 | 8 | 288 | 1 | 323 | 2.05e-38 | 139 |
| Msa0805080 | MtrunA17_Chr5g0412991 | 41.667 | 120 | 67 | 2 | 1 | 120 | 202 | 318 | 1.14e-18 | 85.5 |
| Msa0805080 | MtrunA17_Chr5g0413591 | 49.618 | 131 | 62 | 2 | 158 | 288 | 414 | 540 | 1.55e-30 | 120 |
| Msa0805080 | MtrunA17_Chr5g0413591 | 51.695 | 118 | 53 | 3 | 1 | 118 | 420 | 533 | 4.66e-26 | 107 |
| Msa0805080 | MtrunA17_Chr8g0365361 | 45.802 | 131 | 67 | 2 | 158 | 288 | 180 | 306 | 4.89e-28 | 111 |
| Msa0805080 | MtrunA17_Chr8g0365361 | 44.068 | 118 | 62 | 2 | 1 | 118 | 186 | 299 | 3.62e-22 | 95.1 |
| Msa0805080 | MtrunA17_Chr8g0365381 | 45.802 | 131 | 67 | 2 | 158 | 288 | 428 | 554 | 1.21e-26 | 109 |
| Msa0805080 | MtrunA17_Chr8g0365381 | 45.763 | 118 | 60 | 2 | 1 | 118 | 434 | 547 | 1.63e-23 | 100 |
| Msa0805080 | MtrunA17_Chr8g0365401 | 44.275 | 131 | 69 | 2 | 158 | 288 | 411 | 537 | 6.60e-26 | 107 |
| Msa0805080 | MtrunA17_Chr8g0365401 | 44.915 | 118 | 61 | 2 | 1 | 118 | 417 | 530 | 1.03e-23 | 100 |
| Msa0805080 | MtrunA17_Chr3g0117791 | 44.800 | 125 | 65 | 2 | 158 | 282 | 412 | 532 | 5.66e-22 | 95.5 |
| Msa0805080 | MtrunA17_Chr3g0117791 | 41.525 | 118 | 65 | 2 | 1 | 118 | 418 | 531 | 2.44e-17 | 82.0 |
| Msa0805080 | MtrunA17_Chr5g0412951 | 40.000 | 125 | 72 | 1 | 164 | 288 | 1 | 122 | 1.70e-20 | 87.4 |
| Msa0805080 | MtrunA17_Chr5g0412951 | 41.667 | 120 | 67 | 2 | 1 | 120 | 1 | 117 | 1.81e-19 | 84.7 |
| Msa0805080 | MtrunA17_Chr5g0412971 | 37.815 | 119 | 71 | 1 | 171 | 289 | 1 | 116 | 7.19e-19 | 80.5 |
| Msa0805080 | MtrunA17_Chr5g0412971 | 39.823 | 113 | 65 | 2 | 8 | 120 | 1 | 110 | 4.26e-18 | 78.2 |
| Msa0805080 | MtrunA17_Chr5g0413011 | 37.815 | 119 | 71 | 1 | 171 | 289 | 1 | 116 | 1.59e-18 | 79.3 |
| Msa0805080 | MtrunA17_Chr5g0413011 | 39.823 | 113 | 65 | 2 | 8 | 120 | 1 | 110 | 9.81e-18 | 77.4 |
| Msa0805080 | MtrunA17_Chr4g0076231 | 53.846 | 65 | 30 | 0 | 221 | 285 | 2 | 66 | 3.80e-15 | 71.6 |
| Msa0805080 | MtrunA17_Chr4g0076231 | 52.459 | 61 | 29 | 0 | 58 | 118 | 2 | 62 | 6.52e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805080 | AT1G60390.1 | 43.571 | 140 | 73 | 3 | 151 | 288 | 399 | 534 | 1.69e-26 | 109 |
| Msa0805080 | AT1G60390.1 | 44.915 | 118 | 61 | 2 | 1 | 118 | 414 | 527 | 8.97e-22 | 95.5 |
| Msa0805080 | AT1G23760.1 | 40.458 | 131 | 74 | 2 | 158 | 288 | 406 | 532 | 5.16e-23 | 99.0 |
| Msa0805080 | AT1G23760.1 | 39.831 | 118 | 67 | 2 | 1 | 118 | 412 | 525 | 1.40e-18 | 86.3 |
| Msa0805080 | AT1G70370.2 | 41.985 | 131 | 72 | 2 | 158 | 288 | 410 | 536 | 1.14e-22 | 98.2 |
| Msa0805080 | AT1G70370.2 | 41.026 | 117 | 65 | 2 | 2 | 118 | 417 | 529 | 2.80e-18 | 85.1 |
| Msa0805080 | AT1G70370.1 | 41.985 | 131 | 72 | 2 | 158 | 288 | 410 | 536 | 1.14e-22 | 98.2 |
| Msa0805080 | AT1G70370.1 | 41.026 | 117 | 65 | 2 | 2 | 118 | 417 | 529 | 2.80e-18 | 85.1 |
Find 61 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAACGTCAAACATTCAT+AGG | 0.311920 | 5_3:-21498965 | Msa0805080:CDS |
| TGAGTTCGTAAAATCTGTTT+TGG | 0.317868 | 5_3:-21498802 | Msa0805080:CDS |
| TGAGTTGGTAAAATCTGTTT+TGG | 0.353760 | 5_3:-21500052 | Msa0805080:CDS |
| AGAGAGAGAATGTTGATAGA+AGG | 0.355639 | 5_3:-21499074 | Msa0805080:CDS |
| TCGCACTTCATTCGTTCGTT+GGG | 0.357186 | 5_3:+21499194 | None:intergenic |
| TGGTAAGGTTAGTAAACTTA+TGG | 0.364932 | 5_3:-21498718 | Msa0805080:CDS |
| ACTGAGAATGTGAACGGGTC+AGG | 0.385947 | 5_3:-21500006 | Msa0805080:CDS |
| CAACTCAACCATTTCCTTCG+TGG | 0.400812 | 5_3:+21500068 | None:intergenic |
| GTCGTATTTCATTCGTCCGT+TGG | 0.409005 | 5_3:+21499151 | None:intergenic |
| AACCATTTCCTTCGTGGACT+TGG | 0.409794 | 5_3:+21498824 | None:intergenic |
| TATGAATGTTTGACGTTGAA+AGG | 0.412548 | 5_3:+21500217 | None:intergenic |
| GTCGCACTTCATTCGTTCGT+TGG | 0.417170 | 5_3:+21499193 | None:intergenic |
| GAACTCAACCATTTCCTTCG+TGG | 0.426851 | 5_3:+21498818 | None:intergenic |
| TCGTATTTCATTCGTCCGTT+GGG | 0.429356 | 5_3:+21499152 | None:intergenic |
| TGTTAAATCCACGAAGGAAA+TGG | 0.455759 | 5_3:-21500076 | Msa0805080:CDS |
| ATGAATGTTTGACGTTGAAA+AGG | 0.461949 | 5_3:+21498968 | None:intergenic |
| TGCCAAGTCCACGAAGGAAA+TGG | 0.471212 | 5_3:-21498826 | Msa0805080:CDS |
| TAAGGTTAGTAAACTTATGG+TGG | 0.489452 | 5_3:-21498715 | Msa0805080:CDS |
| TCAGGGAAGACTGTGGTGAT+TGG | 0.498838 | 5_3:-21499988 | Msa0805080:CDS |
| TCAAGGAAAACTGTGGTGAT+TGG | 0.499862 | 5_3:-21498738 | Msa0805080:CDS |
| ATGAATGTTTGACGTTGAAA+GGG | 0.521894 | 5_3:+21500218 | None:intergenic |
| CGAATGAAATACGACCTTGA+TGG | 0.523430 | 5_3:-21499143 | Msa0805080:CDS |
| CACGAAGGAAATGGTTGAGT+TGG | 0.532987 | 5_3:-21500067 | Msa0805080:CDS |
| CTGAGAATGTGAACGGGTCA+AGG | 0.538022 | 5_3:-21498755 | Msa0805080:CDS |
| ACACATTCATTTACTTCACA+TGG | 0.542625 | 5_3:+21500096 | None:intergenic |
| CTGAGAATGTGAACGGGTCA+GGG | 0.550023 | 5_3:-21500005 | Msa0805080:CDS |
| GAAAACTGTGGTGATTGGTA+AGG | 0.551880 | 5_3:-21498733 | Msa0805080:CDS |
| CGCACTTCATTCGTTCGTTG+GGG | 0.554431 | 5_3:+21499195 | None:intergenic |
| CGCAGAACTGAGAATGTGAA+CGG | 0.556967 | 5_3:-21498762 | Msa0805080:CDS |
| CGCAGAACTGAGAATGTGAA+CGG | 0.556967 | 5_3:-21500012 | Msa0805080:CDS |
| TGTGAGGGTGGTGCTAGTCC+AGG | 0.558306 | 5_3:-21498864 | Msa0805080:CDS |
| TGAATGTTTGACGTTGAAAA+GGG | 0.561346 | 5_3:+21498969 | None:intergenic |
| GCAGAACTGAGAATGTGAAC+GGG | 0.563825 | 5_3:-21498761 | Msa0805080:CDS |
| GCAGAACTGAGAATGTGAAC+GGG | 0.563825 | 5_3:-21500011 | Msa0805080:CDS |
| GGAGTCTCTAAGAGAGTGTG+AGG | 0.567121 | 5_3:-21498880 | Msa0805080:CDS |
| GGAGTCTCTAGGAGAGTGTG+AGG | 0.567510 | 5_3:-21500130 | Msa0805080:CDS |
| TCTTTACCTCCTCACCATCA+AGG | 0.574178 | 5_3:+21499129 | None:intergenic |
| GAAGACTGTGGTGATTGGTA+AGG | 0.585023 | 5_3:-21499983 | Msa0805080:intron |
| AAGGTTAGTAAACTTATGGT+GGG | 0.593396 | 5_3:-21498714 | Msa0805080:CDS |
| ACAGAGAGAATGTTGACAGA+AGG | 0.594705 | 5_3:-21500324 | None:intergenic |
| TCTCTAGGAGAGTGTGAGGG+TGG | 0.597205 | 5_3:-21500126 | Msa0805080:CDS |
| TGGGACTGCTCTCATCATCA+AGG | 0.607568 | 5_3:+21499171 | None:intergenic |
| GAAATACGACCTTGATGGTG+AGG | 0.613129 | 5_3:-21499138 | Msa0805080:CDS |
| AGAAGGTGTGATGATGCAAA+TGG | 0.619651 | 5_3:-21499057 | Msa0805080:CDS |
| AATATGATGAGGGAGTCTCT+AGG | 0.631469 | 5_3:-21500141 | Msa0805080:CDS |
| AGGAGGTAAAGATGACGATG+AGG | 0.632091 | 5_3:-21499118 | Msa0805080:CDS |
| TCTCTAAGAGAGTGTGAGGG+TGG | 0.632393 | 5_3:-21498876 | Msa0805080:CDS |
| AGAAGGTGTGATGATGCAAA+TGG | 0.633119 | 5_3:-21500307 | Msa0805080:CDS |
| GGAGGTAAAGATGACGATGA+GGG | 0.645206 | 5_3:-21499117 | Msa0805080:CDS |
| GATGATGAGAGCAGTCCCAA+CGG | 0.646949 | 5_3:-21499167 | Msa0805080:CDS |
| TTGTGTTGAAAATATGATGA+GGG | 0.655824 | 5_3:-21500151 | Msa0805080:CDS |
| ATACGACCTTGATGGTGAGG+AGG | 0.667307 | 5_3:-21499135 | Msa0805080:CDS |
| TGAATGTTTGACGTTGAAAG+GGG | 0.679643 | 5_3:+21500219 | None:intergenic |
| CTCGTGTTGAAAATATGATG+AGG | 0.685703 | 5_3:-21498902 | Msa0805080:CDS |
| TCGTGTTGAAAATATGATGA+GGG | 0.693083 | 5_3:-21498901 | Msa0805080:CDS |
| CTTGTGTTGAAAATATGATG+AGG | 0.694372 | 5_3:-21500152 | Msa0805080:CDS |
| GAGTCTCTAAGAGAGTGTGA+GGG | 0.706118 | 5_3:-21498879 | Msa0805080:CDS |
| TGAATGTGTTAAATCCACGA+AGG | 0.707814 | 5_3:-21500082 | Msa0805080:CDS |
| GAGTCTCTAGGAGAGTGTGA+GGG | 0.709725 | 5_3:-21500129 | Msa0805080:CDS |
| GAACGGGTCAGGGAAGACTG+TGG | 0.797771 | 5_3:-21499995 | Msa0805080:CDS |
| GAACGGGTCAAGGAAAACTG+TGG | 0.807880 | 5_3:-21498745 | Msa0805080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGCAAATATATTTTC+CGG | + | chr5_3:21498779-21498798 | None:intergenic | 15.0% |
| !! | GCGAATATATATATATTATT+TGG | - | chr5_3:21499359-21499378 | Msa0805080:intron | 15.0% |
| !!! | AAAATATTTTAGCAAAACTT+GGG | + | chr5_3:21499438-21499457 | None:intergenic | 15.0% |
| !!! | AATTTTGCAAATATATTTTC+CGG | + | chr5_3:21498779-21498798 | None:intergenic | 15.0% |
| !! | GCGAATATATATATATTATT+TGG | - | chr5_3:21499359-21499378 | Msa0805080:intron | 15.0% |
| !!! | AAAATATTTTAGCAAAACTT+GGG | + | chr5_3:21499438-21499457 | None:intergenic | 15.0% |
| !! | AAATGTTTATGACATGTTAT+TGG | + | chr5_3:21499097-21499116 | None:intergenic | 20.0% |
| !!! | AAATATTTTAGCAAAACTTG+GGG | + | chr5_3:21499437-21499456 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGCAAAACT+TGG | + | chr5_3:21499439-21499458 | None:intergenic | 20.0% |
| !!! | CAAGTTTTGCTAAAATATTT+TGG | - | chr5_3:21499437-21499456 | Msa0805080:intron | 20.0% |
| !! | ACTCAATATGTTATAATTTG+TGG | - | chr5_3:21499570-21499589 | Msa0805080:intron | 20.0% |
| !! | AAATGTTTATGACATGTTAT+TGG | + | chr5_3:21499097-21499116 | None:intergenic | 20.0% |
| !!! | AAATATTTTAGCAAAACTTG+GGG | + | chr5_3:21499437-21499456 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGCAAAACT+TGG | + | chr5_3:21499439-21499458 | None:intergenic | 20.0% |
| !!! | CAAGTTTTGCTAAAATATTT+TGG | - | chr5_3:21499437-21499456 | Msa0805080:intron | 20.0% |
| !! | ACTCAATATGTTATAATTTG+TGG | - | chr5_3:21499570-21499589 | Msa0805080:intron | 20.0% |
| ! | TTGTGTTGAAAATATGATGA+GGG | - | chr5_3:21498871-21498890 | Msa0805080:CDS | 25.0% |
| ! | GCATTATATGGTTAAAATGA+CGG | + | chr5_3:21499144-21499163 | None:intergenic | 25.0% |
| ! | TTAGTAATGTTCATATACTC+TGG | - | chr5_3:21499272-21499291 | Msa0805080:intron | 25.0% |
| ! | TAGTAATGTTCATATACTCT+GGG | - | chr5_3:21499273-21499292 | Msa0805080:intron | 25.0% |
| ! | TTCTGTAAAAAAGACATCTT+CGG | + | chr5_3:21500011-21500030 | None:intergenic | 25.0% |
| ! | TTGTGTTGAAAATATGATGA+GGG | - | chr5_3:21498871-21498890 | Msa0805080:CDS | 25.0% |
| ! | GCATTATATGGTTAAAATGA+CGG | + | chr5_3:21499144-21499163 | None:intergenic | 25.0% |
| ! | TTAGTAATGTTCATATACTC+TGG | - | chr5_3:21499272-21499291 | Msa0805080:intron | 25.0% |
| ! | TAGTAATGTTCATATACTCT+GGG | - | chr5_3:21499273-21499292 | Msa0805080:intron | 25.0% |
| ! | TTCTGTAAAAAAGACATCTT+CGG | + | chr5_3:21500011-21500030 | None:intergenic | 25.0% |
| ATGAATGTTTGACGTTGAAA+GGG | + | chr5_3:21498807-21498826 | None:intergenic | 30.0% | |
| TATGAATGTTTGACGTTGAA+AGG | + | chr5_3:21498808-21498827 | None:intergenic | 30.0% | |
| CTTGTGTTGAAAATATGATG+AGG | - | chr5_3:21498870-21498889 | Msa0805080:CDS | 30.0% | |
| ACACATTCATTTACTTCACA+TGG | + | chr5_3:21498929-21498948 | None:intergenic | 30.0% | |
| !!! | TGAGTTGGTAAAATCTGTTT+TGG | - | chr5_3:21498970-21498989 | Msa0805080:CDS | 30.0% |
| !!! | GAGTTGGTAAAATCTGTTTT+GGG | - | chr5_3:21498971-21498990 | Msa0805080:CDS | 30.0% |
| GGTAAGGTTAGTAAACTTAA+TGG | - | chr5_3:21499055-21499074 | Msa0805080:CDS | 30.0% | |
| AAGGTTAGTAAACTTAATGG+TGG | - | chr5_3:21499058-21499077 | Msa0805080:CDS | 30.0% | |
| TTTGATAGAGACGCATTATA+TGG | + | chr5_3:21499156-21499175 | None:intergenic | 30.0% | |
| AGTAATGTTCATATACTCTG+GGG | - | chr5_3:21499274-21499293 | Msa0805080:intron | 30.0% | |
| AGATGAGATCATGTATGAAT+TGG | + | chr5_3:21499667-21499686 | None:intergenic | 30.0% | |
| !! | TTTGAGAAGTATCACATTGA+TGG | - | chr5_3:21499795-21499814 | Msa0805080:intron | 30.0% |
| ! | AAGTATCACATTGATGGTTA+GGG | - | chr5_3:21499801-21499820 | Msa0805080:intron | 30.0% |
| TGAATGTTTGACGTTGAAAA+GGG | + | chr5_3:21500056-21500075 | None:intergenic | 30.0% | |
| ATGAATGTTTGACGTTGAAA+AGG | + | chr5_3:21498807-21498826 | None:intergenic | 30.0% | |
| TTTCAACGTCAAACATTCAT+AGG | - | chr5_3:21498807-21498826 | Msa0805080:CDS | 30.0% | |
| TCGTGTTGAAAATATGATGA+GGG | - | chr5_3:21500121-21500140 | Msa0805080:CDS | 30.0% | |
| ! | TGAGTTCGTAAAATCTGTTT+TGG | - | chr5_3:21500220-21500239 | Msa0805080:CDS | 30.0% |
| ! | GAGTTCGTAAAATCTGTTTT+GGG | - | chr5_3:21500221-21500240 | Msa0805080:CDS | 30.0% |
| TGGTAAGGTTAGTAAACTTA+TGG | - | chr5_3:21499054-21499073 | Msa0805080:CDS | 30.0% | |
| TAAGGTTAGTAAACTTATGG+TGG | - | chr5_3:21500307-21500326 | Msa0805080:CDS | 30.0% | |
| AAGGTTAGTAAACTTATGGT+GGG | - | chr5_3:21500308-21500327 | Msa0805080:CDS | 30.0% | |
| ATGAATGTTTGACGTTGAAA+GGG | + | chr5_3:21498807-21498826 | None:intergenic | 30.0% | |
| TATGAATGTTTGACGTTGAA+AGG | + | chr5_3:21498808-21498827 | None:intergenic | 30.0% | |
| CTTGTGTTGAAAATATGATG+AGG | - | chr5_3:21498870-21498889 | Msa0805080:CDS | 30.0% | |
| ACACATTCATTTACTTCACA+TGG | + | chr5_3:21498929-21498948 | None:intergenic | 30.0% | |
| !!! | TGAGTTGGTAAAATCTGTTT+TGG | - | chr5_3:21498970-21498989 | Msa0805080:CDS | 30.0% |
| !!! | GAGTTGGTAAAATCTGTTTT+GGG | - | chr5_3:21498971-21498990 | Msa0805080:CDS | 30.0% |
| GGTAAGGTTAGTAAACTTAA+TGG | - | chr5_3:21499055-21499074 | Msa0805080:CDS | 30.0% | |
| AAGGTTAGTAAACTTAATGG+TGG | - | chr5_3:21499058-21499077 | Msa0805080:CDS | 30.0% | |
| TTTGATAGAGACGCATTATA+TGG | + | chr5_3:21499156-21499175 | None:intergenic | 30.0% | |
| AGTAATGTTCATATACTCTG+GGG | - | chr5_3:21499274-21499293 | Msa0805080:intron | 30.0% | |
| AGATGAGATCATGTATGAAT+TGG | + | chr5_3:21499667-21499686 | None:intergenic | 30.0% | |
| !! | TTTGAGAAGTATCACATTGA+TGG | - | chr5_3:21499795-21499814 | Msa0805080:intron | 30.0% |
| ! | AAGTATCACATTGATGGTTA+GGG | - | chr5_3:21499801-21499820 | Msa0805080:intron | 30.0% |
| TGAATGTTTGACGTTGAAAA+GGG | + | chr5_3:21500056-21500075 | None:intergenic | 30.0% | |
| ATGAATGTTTGACGTTGAAA+AGG | + | chr5_3:21498807-21498826 | None:intergenic | 30.0% | |
| TTTCAACGTCAAACATTCAT+AGG | - | chr5_3:21498807-21498826 | Msa0805080:CDS | 30.0% | |
| TCGTGTTGAAAATATGATGA+GGG | - | chr5_3:21500121-21500140 | Msa0805080:CDS | 30.0% | |
| ! | TGAGTTCGTAAAATCTGTTT+TGG | - | chr5_3:21500220-21500239 | Msa0805080:CDS | 30.0% |
| ! | GAGTTCGTAAAATCTGTTTT+GGG | - | chr5_3:21500221-21500240 | Msa0805080:CDS | 30.0% |
| TGGTAAGGTTAGTAAACTTA+TGG | - | chr5_3:21499054-21499073 | Msa0805080:CDS | 30.0% | |
| TAAGGTTAGTAAACTTATGG+TGG | - | chr5_3:21500307-21500326 | Msa0805080:CDS | 30.0% | |
| AAGGTTAGTAAACTTATGGT+GGG | - | chr5_3:21500308-21500327 | Msa0805080:CDS | 30.0% | |
| !!! | ACCAAAGATGTCGTTTTTAC+CGG | - | chr5_3:21498757-21498776 | Msa0805080:CDS | 35.0% |
| TGAATGTTTGACGTTGAAAG+GGG | + | chr5_3:21498806-21498825 | None:intergenic | 35.0% | |
| TGAATGTGTTAAATCCACGA+AGG | - | chr5_3:21498940-21498959 | Msa0805080:CDS | 35.0% | |
| TGTTAAATCCACGAAGGAAA+TGG | - | chr5_3:21498946-21498965 | Msa0805080:CDS | 35.0% | |
| !! | TGTTTTGGGTAACAATGTTC+TGG | - | chr5_3:21498985-21499004 | Msa0805080:CDS | 35.0% |
| GGTAGTATACAAGCATGTAT+GGG | + | chr5_3:21499123-21499142 | None:intergenic | 35.0% | |
| GTAATGTTCATATACTCTGG+GGG | - | chr5_3:21499275-21499294 | Msa0805080:intron | 35.0% | |
| TAATGTTCATATACTCTGGG+GGG | - | chr5_3:21499276-21499295 | Msa0805080:intron | 35.0% | |
| ATAATGATGTACCCTGTTAG+AGG | + | chr5_3:21499320-21499339 | None:intergenic | 35.0% | |
| GCAAGACTCTGAATGTAATA+GGG | - | chr5_3:21499596-21499615 | Msa0805080:intron | 35.0% | |
| ACTCTGAATGTAATAGGGTT+AGG | - | chr5_3:21499601-21499620 | Msa0805080:intron | 35.0% | |
| ATGATCTCATCTACAATTGC+AGG | - | chr5_3:21499675-21499694 | Msa0805080:intron | 35.0% | |
| TTGATTCATTCGAAGGAAGA+CGG | - | chr5_3:21499711-21499730 | Msa0805080:intron | 35.0% | |
| ! | TTGGTGTTTAATCCAATCTC+AGG | - | chr5_3:21499735-21499754 | Msa0805080:intron | 35.0% |
| TAATCCAATCTCAGGAGATT+CGG | - | chr5_3:21499743-21499762 | Msa0805080:intron | 35.0% | |
| ! | GAAGTATCACATTGATGGTT+AGG | - | chr5_3:21499800-21499819 | Msa0805080:intron | 35.0% |
| TCTGAAAAATTCATCGAGGT+AGG | + | chr5_3:21499931-21499950 | None:intergenic | 35.0% | |
| ! | TCTCTCTGAAAAATTCATCG+AGG | + | chr5_3:21499935-21499954 | None:intergenic | 35.0% |
| ! | AGAGAGAGAATGTTGATAGA+AGG | - | chr5_3:21499948-21499967 | Msa0805080:intron | 35.0% |
| CTCGTGTTGAAAATATGATG+AGG | - | chr5_3:21500120-21500139 | Msa0805080:CDS | 35.0% | |
| !!! | GCACTTTTTTTTACTTCACC+TGG | + | chr5_3:21500179-21500198 | None:intergenic | 35.0% |
| !! | TGTTTTGGGTAACAATGTTC+TGG | - | chr5_3:21498985-21499004 | Msa0805080:CDS | 35.0% |
| !!! | ACCAAAGATGTCGTTTTTAC+CGG | - | chr5_3:21498757-21498776 | Msa0805080:CDS | 35.0% |
| TGAATGTTTGACGTTGAAAG+GGG | + | chr5_3:21498806-21498825 | None:intergenic | 35.0% | |
| TGAATGTGTTAAATCCACGA+AGG | - | chr5_3:21498940-21498959 | Msa0805080:CDS | 35.0% | |
| TGTTAAATCCACGAAGGAAA+TGG | - | chr5_3:21498946-21498965 | Msa0805080:CDS | 35.0% | |
| !! | TGTTTTGGGTAACAATGTTC+TGG | - | chr5_3:21498985-21499004 | Msa0805080:CDS | 35.0% |
| GGTAGTATACAAGCATGTAT+GGG | + | chr5_3:21499123-21499142 | None:intergenic | 35.0% | |
| GTAATGTTCATATACTCTGG+GGG | - | chr5_3:21499275-21499294 | Msa0805080:intron | 35.0% | |
| TAATGTTCATATACTCTGGG+GGG | - | chr5_3:21499276-21499295 | Msa0805080:intron | 35.0% | |
| ATAATGATGTACCCTGTTAG+AGG | + | chr5_3:21499320-21499339 | None:intergenic | 35.0% | |
| GCAAGACTCTGAATGTAATA+GGG | - | chr5_3:21499596-21499615 | Msa0805080:intron | 35.0% | |
| ACTCTGAATGTAATAGGGTT+AGG | - | chr5_3:21499601-21499620 | Msa0805080:intron | 35.0% | |
| ATGATCTCATCTACAATTGC+AGG | - | chr5_3:21499675-21499694 | Msa0805080:intron | 35.0% | |
| TTGATTCATTCGAAGGAAGA+CGG | - | chr5_3:21499711-21499730 | Msa0805080:intron | 35.0% | |
| ! | TTGGTGTTTAATCCAATCTC+AGG | - | chr5_3:21499735-21499754 | Msa0805080:intron | 35.0% |
| TAATCCAATCTCAGGAGATT+CGG | - | chr5_3:21499743-21499762 | Msa0805080:intron | 35.0% | |
| ! | GAAGTATCACATTGATGGTT+AGG | - | chr5_3:21499800-21499819 | Msa0805080:intron | 35.0% |
| TCTGAAAAATTCATCGAGGT+AGG | + | chr5_3:21499931-21499950 | None:intergenic | 35.0% | |
| ! | TCTCTCTGAAAAATTCATCG+AGG | + | chr5_3:21499935-21499954 | None:intergenic | 35.0% |
| ! | AGAGAGAGAATGTTGATAGA+AGG | - | chr5_3:21499948-21499967 | Msa0805080:intron | 35.0% |
| CTCGTGTTGAAAATATGATG+AGG | - | chr5_3:21500120-21500139 | Msa0805080:CDS | 35.0% | |
| !!! | GCACTTTTTTTTACTTCACC+TGG | + | chr5_3:21500179-21500198 | None:intergenic | 35.0% |
| !! | TGTTTTGGGTAACAATGTTC+TGG | - | chr5_3:21498985-21499004 | Msa0805080:CDS | 35.0% |
| ! | AGAAGGTGTGATGATGCAAA+TGG | - | chr5_3:21498715-21498734 | Msa0805080:CDS | 40.0% |
| TCCGGTAAAAACGACATCTT+TGG | + | chr5_3:21498761-21498780 | None:intergenic | 40.0% | |
| AATATGATGAGGGAGTCTCT+AGG | - | chr5_3:21498881-21498900 | Msa0805080:CDS | 40.0% | |
| CGGTAGTATACAAGCATGTA+TGG | + | chr5_3:21499124-21499143 | None:intergenic | 40.0% | |
| ! | AATGTTCATATACTCTGGGG+GGG | - | chr5_3:21499277-21499296 | Msa0805080:intron | 40.0% |
| CAGGGTACATCATTATGTGA+AGG | - | chr5_3:21499324-21499343 | Msa0805080:intron | 40.0% | |
| CGCAAGACTCTGAATGTAAT+AGG | - | chr5_3:21499595-21499614 | Msa0805080:intron | 40.0% | |
| ATCTACAATTGCAGGAGATG+TGG | - | chr5_3:21499683-21499702 | Msa0805080:intron | 40.0% | |
| GGACAACTTGATTCATTCGA+AGG | - | chr5_3:21499704-21499723 | Msa0805080:intron | 40.0% | |
| TCGTATTTCATTCGTCCGTT+GGG | + | chr5_3:21499873-21499892 | None:intergenic | 40.0% | |
| CGAATGAAATACGACCTTGA+TGG | - | chr5_3:21499879-21499898 | Msa0805080:intron | 40.0% | |
| ! | AGAAGGTGTGATGATGCAAA+TGG | - | chr5_3:21498715-21498734 | Msa0805080:CDS | 40.0% |
| TCAAGGAAAACTGTGGTGAT+TGG | - | chr5_3:21500284-21500303 | Msa0805080:CDS | 40.0% | |
| GAAAACTGTGGTGATTGGTA+AGG | - | chr5_3:21500289-21500308 | Msa0805080:CDS | 40.0% | |
| ! | AGAAGGTGTGATGATGCAAA+TGG | - | chr5_3:21498715-21498734 | Msa0805080:CDS | 40.0% |
| TCCGGTAAAAACGACATCTT+TGG | + | chr5_3:21498761-21498780 | None:intergenic | 40.0% | |
| AATATGATGAGGGAGTCTCT+AGG | - | chr5_3:21498881-21498900 | Msa0805080:CDS | 40.0% | |
| CGGTAGTATACAAGCATGTA+TGG | + | chr5_3:21499124-21499143 | None:intergenic | 40.0% | |
| ! | AATGTTCATATACTCTGGGG+GGG | - | chr5_3:21499277-21499296 | Msa0805080:intron | 40.0% |
| CAGGGTACATCATTATGTGA+AGG | - | chr5_3:21499324-21499343 | Msa0805080:intron | 40.0% | |
| CGCAAGACTCTGAATGTAAT+AGG | - | chr5_3:21499595-21499614 | Msa0805080:intron | 40.0% | |
| ATCTACAATTGCAGGAGATG+TGG | - | chr5_3:21499683-21499702 | Msa0805080:intron | 40.0% | |
| GGACAACTTGATTCATTCGA+AGG | - | chr5_3:21499704-21499723 | Msa0805080:intron | 40.0% | |
| TCGTATTTCATTCGTCCGTT+GGG | + | chr5_3:21499873-21499892 | None:intergenic | 40.0% | |
| CGAATGAAATACGACCTTGA+TGG | - | chr5_3:21499879-21499898 | Msa0805080:intron | 40.0% | |
| ! | AGAAGGTGTGATGATGCAAA+TGG | - | chr5_3:21498715-21498734 | Msa0805080:CDS | 40.0% |
| TCAAGGAAAACTGTGGTGAT+TGG | - | chr5_3:21500284-21500303 | Msa0805080:CDS | 40.0% | |
| GAAAACTGTGGTGATTGGTA+AGG | - | chr5_3:21500289-21500308 | Msa0805080:CDS | 40.0% | |
| CAACTCAACCATTTCCTTCG+TGG | + | chr5_3:21498957-21498976 | None:intergenic | 45.0% | |
| CACGAAGGAAATGGTTGAGT+TGG | - | chr5_3:21498955-21498974 | Msa0805080:CDS | 45.0% | |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21499010-21499029 | Msa0805080:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21499011-21499030 | Msa0805080:CDS | 45.0% | |
| GAAGACTGTGGTGATTGGTA+AGG | - | chr5_3:21499039-21499058 | Msa0805080:CDS | 45.0% | |
| ! | ATGTTCATATACTCTGGGGG+GGG | - | chr5_3:21499278-21499297 | Msa0805080:intron | 45.0% |
| TTGTCCGAATCTCCTGAGAT+TGG | + | chr5_3:21499750-21499769 | None:intergenic | 45.0% | |
| AATCTCAGGAGATTCGGACA+AGG | - | chr5_3:21499749-21499768 | Msa0805080:intron | 45.0% | |
| TCGCACTTCATTCGTTCGTT+GGG | + | chr5_3:21499831-21499850 | None:intergenic | 45.0% | |
| GTCGTATTTCATTCGTCCGT+TGG | + | chr5_3:21499874-21499893 | None:intergenic | 45.0% | |
| !! | GAAATACGACCTTGATGGTG+AGG | - | chr5_3:21499884-21499903 | Msa0805080:intron | 45.0% |
| TCTTTACCTCCTCACCATCA+AGG | + | chr5_3:21499896-21499915 | None:intergenic | 45.0% | |
| AGGAGGTAAAGATGACGATG+AGG | - | chr5_3:21499904-21499923 | Msa0805080:intron | 45.0% | |
| GGAGGTAAAGATGACGATGA+GGG | - | chr5_3:21499905-21499924 | Msa0805080:intron | 45.0% | |
| ! | GAGTCTCTAAGAGAGTGTGA+GGG | - | chr5_3:21500143-21500162 | Msa0805080:CDS | 45.0% |
| !! | AAAAAGTGCCAAGTCCACGA+AGG | - | chr5_3:21500190-21500209 | Msa0805080:CDS | 45.0% |
| AACCATTTCCTTCGTGGACT+TGG | + | chr5_3:21500201-21500220 | None:intergenic | 45.0% | |
| GAACTCAACCATTTCCTTCG+TGG | + | chr5_3:21500207-21500226 | None:intergenic | 45.0% | |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21499010-21499029 | Msa0805080:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21499011-21499030 | Msa0805080:CDS | 45.0% | |
| CAACTCAACCATTTCCTTCG+TGG | + | chr5_3:21498957-21498976 | None:intergenic | 45.0% | |
| CACGAAGGAAATGGTTGAGT+TGG | - | chr5_3:21498955-21498974 | Msa0805080:CDS | 45.0% | |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21499010-21499029 | Msa0805080:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21499011-21499030 | Msa0805080:CDS | 45.0% | |
| GAAGACTGTGGTGATTGGTA+AGG | - | chr5_3:21499039-21499058 | Msa0805080:CDS | 45.0% | |
| ! | ATGTTCATATACTCTGGGGG+GGG | - | chr5_3:21499278-21499297 | Msa0805080:intron | 45.0% |
| TTGTCCGAATCTCCTGAGAT+TGG | + | chr5_3:21499750-21499769 | None:intergenic | 45.0% | |
| AATCTCAGGAGATTCGGACA+AGG | - | chr5_3:21499749-21499768 | Msa0805080:intron | 45.0% | |
| TCGCACTTCATTCGTTCGTT+GGG | + | chr5_3:21499831-21499850 | None:intergenic | 45.0% | |
| GTCGTATTTCATTCGTCCGT+TGG | + | chr5_3:21499874-21499893 | None:intergenic | 45.0% | |
| !! | GAAATACGACCTTGATGGTG+AGG | - | chr5_3:21499884-21499903 | Msa0805080:intron | 45.0% |
| TCTTTACCTCCTCACCATCA+AGG | + | chr5_3:21499896-21499915 | None:intergenic | 45.0% | |
| AGGAGGTAAAGATGACGATG+AGG | - | chr5_3:21499904-21499923 | Msa0805080:intron | 45.0% | |
| GGAGGTAAAGATGACGATGA+GGG | - | chr5_3:21499905-21499924 | Msa0805080:intron | 45.0% | |
| ! | GAGTCTCTAAGAGAGTGTGA+GGG | - | chr5_3:21500143-21500162 | Msa0805080:CDS | 45.0% |
| !! | AAAAAGTGCCAAGTCCACGA+AGG | - | chr5_3:21500190-21500209 | Msa0805080:CDS | 45.0% |
| AACCATTTCCTTCGTGGACT+TGG | + | chr5_3:21500201-21500220 | None:intergenic | 45.0% | |
| GAACTCAACCATTTCCTTCG+TGG | + | chr5_3:21500207-21500226 | None:intergenic | 45.0% | |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21499010-21499029 | Msa0805080:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21499011-21499030 | Msa0805080:CDS | 45.0% | |
| !! | AAAAGATATATTATATTATT+GGG | + | chr5_3:21499179-21499198 | None:intergenic | 5.0% |
| !! | AAAAAGATATATTATATTAT+TGG | + | chr5_3:21499180-21499199 | None:intergenic | 5.0% |
| !! | AAAAGATATATTATATTATT+GGG | + | chr5_3:21499179-21499198 | None:intergenic | 5.0% |
| !! | AAAAAGATATATTATATTAT+TGG | + | chr5_3:21499180-21499199 | None:intergenic | 5.0% |
| ! | GAGTCTCTAGGAGAGTGTGA+GGG | - | chr5_3:21498893-21498912 | Msa0805080:CDS | 50.0% |
| ACTGAGAATGTGAACGGGTC+AGG | - | chr5_3:21499016-21499035 | Msa0805080:CDS | 50.0% | |
| CTGAGAATGTGAACGGGTCA+GGG | - | chr5_3:21499017-21499036 | Msa0805080:CDS | 50.0% | |
| TCAGGGAAGACTGTGGTGAT+TGG | - | chr5_3:21499034-21499053 | Msa0805080:CDS | 50.0% | |
| ! | TGTTCATATACTCTGGGGGG+GGG | - | chr5_3:21499279-21499298 | Msa0805080:intron | 50.0% |
| TCATTCGAAGGAAGACGGCT+TGG | - | chr5_3:21499716-21499735 | Msa0805080:intron | 50.0% | |
| CGCACTTCATTCGTTCGTTG+GGG | + | chr5_3:21499830-21499849 | None:intergenic | 50.0% | |
| GTCGCACTTCATTCGTTCGT+TGG | + | chr5_3:21499832-21499851 | None:intergenic | 50.0% | |
| TGGGACTGCTCTCATCATCA+AGG | + | chr5_3:21499854-21499873 | None:intergenic | 50.0% | |
| GATGATGAGAGCAGTCCCAA+CGG | - | chr5_3:21499855-21499874 | Msa0805080:intron | 50.0% | |
| !! | ATACGACCTTGATGGTGAGG+AGG | - | chr5_3:21499887-21499906 | Msa0805080:intron | 50.0% |
| ! | GGAGTCTCTAAGAGAGTGTG+AGG | - | chr5_3:21500142-21500161 | Msa0805080:CDS | 50.0% |
| ! | TCTCTAAGAGAGTGTGAGGG+TGG | - | chr5_3:21500146-21500165 | Msa0805080:CDS | 50.0% |
| TGCCAAGTCCACGAAGGAAA+TGG | - | chr5_3:21500196-21500215 | Msa0805080:CDS | 50.0% | |
| CTGAGAATGTGAACGGGTCA+AGG | - | chr5_3:21499017-21499036 | Msa0805080:CDS | 50.0% | |
| GAACGGGTCAAGGAAAACTG+TGG | - | chr5_3:21500277-21500296 | Msa0805080:CDS | 50.0% | |
| ! | GAGTCTCTAGGAGAGTGTGA+GGG | - | chr5_3:21498893-21498912 | Msa0805080:CDS | 50.0% |
| ACTGAGAATGTGAACGGGTC+AGG | - | chr5_3:21499016-21499035 | Msa0805080:CDS | 50.0% | |
| CTGAGAATGTGAACGGGTCA+GGG | - | chr5_3:21499017-21499036 | Msa0805080:CDS | 50.0% | |
| TCAGGGAAGACTGTGGTGAT+TGG | - | chr5_3:21499034-21499053 | Msa0805080:CDS | 50.0% | |
| ! | TGTTCATATACTCTGGGGGG+GGG | - | chr5_3:21499279-21499298 | Msa0805080:intron | 50.0% |
| TCATTCGAAGGAAGACGGCT+TGG | - | chr5_3:21499716-21499735 | Msa0805080:intron | 50.0% | |
| CGCACTTCATTCGTTCGTTG+GGG | + | chr5_3:21499830-21499849 | None:intergenic | 50.0% | |
| GTCGCACTTCATTCGTTCGT+TGG | + | chr5_3:21499832-21499851 | None:intergenic | 50.0% | |
| TGGGACTGCTCTCATCATCA+AGG | + | chr5_3:21499854-21499873 | None:intergenic | 50.0% | |
| GATGATGAGAGCAGTCCCAA+CGG | - | chr5_3:21499855-21499874 | Msa0805080:intron | 50.0% | |
| !! | ATACGACCTTGATGGTGAGG+AGG | - | chr5_3:21499887-21499906 | Msa0805080:intron | 50.0% |
| ! | GGAGTCTCTAAGAGAGTGTG+AGG | - | chr5_3:21500142-21500161 | Msa0805080:CDS | 50.0% |
| ! | TCTCTAAGAGAGTGTGAGGG+TGG | - | chr5_3:21500146-21500165 | Msa0805080:CDS | 50.0% |
| TGCCAAGTCCACGAAGGAAA+TGG | - | chr5_3:21500196-21500215 | Msa0805080:CDS | 50.0% | |
| CTGAGAATGTGAACGGGTCA+AGG | - | chr5_3:21499017-21499036 | Msa0805080:CDS | 50.0% | |
| GAACGGGTCAAGGAAAACTG+TGG | - | chr5_3:21500277-21500296 | Msa0805080:CDS | 50.0% | |
| ! | GGAGTCTCTAGGAGAGTGTG+AGG | - | chr5_3:21498892-21498911 | Msa0805080:CDS | 55.0% |
| ! | TCTCTAGGAGAGTGTGAGGG+TGG | - | chr5_3:21498896-21498915 | Msa0805080:CDS | 55.0% |
| ! | GTTCATATACTCTGGGGGGG+GGG | - | chr5_3:21499280-21499299 | Msa0805080:intron | 55.0% |
| ! | TTCATATACTCTGGGGGGGG+GGG | - | chr5_3:21499281-21499300 | Msa0805080:intron | 55.0% |
| ! | GGAGTCTCTAGGAGAGTGTG+AGG | - | chr5_3:21498892-21498911 | Msa0805080:CDS | 55.0% |
| ! | TCTCTAGGAGAGTGTGAGGG+TGG | - | chr5_3:21498896-21498915 | Msa0805080:CDS | 55.0% |
| ! | GTTCATATACTCTGGGGGGG+GGG | - | chr5_3:21499280-21499299 | Msa0805080:intron | 55.0% |
| ! | TTCATATACTCTGGGGGGGG+GGG | - | chr5_3:21499281-21499300 | Msa0805080:intron | 55.0% |
| GAACGGGTCAGGGAAGACTG+TGG | - | chr5_3:21499027-21499046 | Msa0805080:CDS | 60.0% | |
| ! | TCATATACTCTGGGGGGGGG+GGG | - | chr5_3:21499282-21499301 | Msa0805080:intron | 60.0% |
| ! | GGGGGGGTGTACCTCTAACA+GGG | - | chr5_3:21499306-21499325 | Msa0805080:intron | 60.0% |
| ! | TGTGAGGGTGGTGCTAGTCC+AGG | - | chr5_3:21498908-21498927 | Msa0805080:CDS | 60.0% |
| GAACGGGTCAGGGAAGACTG+TGG | - | chr5_3:21499027-21499046 | Msa0805080:CDS | 60.0% | |
| ! | TCATATACTCTGGGGGGGGG+GGG | - | chr5_3:21499282-21499301 | Msa0805080:intron | 60.0% |
| ! | GGGGGGGTGTACCTCTAACA+GGG | - | chr5_3:21499306-21499325 | Msa0805080:intron | 60.0% |
| ! | TGTGAGGGTGGTGCTAGTCC+AGG | - | chr5_3:21498908-21498927 | Msa0805080:CDS | 60.0% |
| ! | CATATACTCTGGGGGGGGGG+GGG | - | chr5_3:21499283-21499302 | Msa0805080:intron | 65.0% |
| ! | ATATACTCTGGGGGGGGGGG+GGG | - | chr5_3:21499284-21499303 | Msa0805080:intron | 65.0% |
| ! | GGGGGGGGTGTACCTCTAAC+AGG | - | chr5_3:21499305-21499324 | Msa0805080:intron | 65.0% |
| ! | CATATACTCTGGGGGGGGGG+GGG | - | chr5_3:21499283-21499302 | Msa0805080:intron | 65.0% |
| ! | ATATACTCTGGGGGGGGGGG+GGG | - | chr5_3:21499284-21499303 | Msa0805080:intron | 65.0% |
| ! | GGGGGGGGTGTACCTCTAAC+AGG | - | chr5_3:21499305-21499324 | Msa0805080:intron | 65.0% |
| ! | TATACTCTGGGGGGGGGGGG+GGG | - | chr5_3:21499285-21499304 | Msa0805080:intron | 70.0% |
| ! | TATACTCTGGGGGGGGGGGG+GGG | - | chr5_3:21499285-21499304 | Msa0805080:intron | 70.0% |
| ! | ATACTCTGGGGGGGGGGGGG+GGG | - | chr5_3:21499286-21499305 | Msa0805080:intron | 75.0% |
| ! | ATACTCTGGGGGGGGGGGGG+GGG | - | chr5_3:21499286-21499305 | Msa0805080:intron | 75.0% |
| !! | TACTCTGGGGGGGGGGGGGG+GGG | - | chr5_3:21499287-21499306 | Msa0805080:intron | 80.0% |
| !! | TACTCTGGGGGGGGGGGGGG+GGG | - | chr5_3:21499287-21499306 | Msa0805080:intron | 80.0% |
| !! | ACTCTGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499288-21499307 | Msa0805080:intron | 85.0% |
| !! | ACTCTGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499288-21499307 | Msa0805080:intron | 85.0% |
| !! | CTCTGGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499289-21499308 | Msa0805080:intron | 90.0% |
| ! | TCTGGGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499290-21499309 | Msa0805080:intron | 90.0% |
| !! | CTCTGGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499289-21499308 | Msa0805080:intron | 90.0% |
| ! | TCTGGGGGGGGGGGGGGGGG+GGG | - | chr5_3:21499290-21499309 | Msa0805080:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 21498707 | 21500337 | 21498707 | ID=Msa0805080;Name=Msa0805080 |
| chr5_3 | mRNA | 21498707 | 21500337 | 21498707 | ID=Msa0805080-mRNA-1;Parent=Msa0805080;Name=Msa0805080-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|2|0|289 |
| chr5_3 | exon | 21499984 | 21500337 | 21499984 | ID=Msa0805080-mRNA-1:exon:8635;Parent=Msa0805080-mRNA-1 |
| chr5_3 | exon | 21498707 | 21499222 | 21498707 | ID=Msa0805080-mRNA-1:exon:8634;Parent=Msa0805080-mRNA-1 |
| chr5_3 | CDS | 21499984 | 21500337 | 21499984 | ID=Msa0805080-mRNA-1:cds;Parent=Msa0805080-mRNA-1 |
| chr5_3 | CDS | 21498707 | 21499222 | 21498707 | ID=Msa0805080-mRNA-1:cds;Parent=Msa0805080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
